AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0034210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034210 MtrunA17_Chr1g0195111 98.720 1016 8 1 1 1016 1 1011 0.0 2079
Msa0034210 MtrunA17_Chr7g0271961 55.186 1022 402 17 13 1016 16 999 0.0 1052
Msa0034210 MtrunA17_Chr7g0269691 80.510 549 102 1 8 556 12 555 0.0 895
Msa0034210 MtrunA17_Chr3g0102921 49.001 851 371 17 23 825 41 876 0.0 739
Msa0034210 MtrunA17_Chr7g0269681 77.754 463 98 3 556 1015 21 481 0.0 730
Msa0034210 MtrunA17_Chr5g0447041 47.568 843 353 15 23 787 37 868 0.0 728
Msa0034210 MtrunA17_Chr1g0192481 72.664 428 108 5 341 765 3 424 0.0 636
Msa0034210 MtrunA17_Chr7g0257301 57.019 463 162 7 326 760 322 775 1.57e-166 516
Msa0034210 MtrunA17_Chr7g0257301 48.611 144 65 3 25 162 14 154 8.08e-33 137
Msa0034210 MtrunA17_Chr5g0411971 43.243 444 224 7 334 763 327 756 6.69e-104 349
Msa0034210 MtrunA17_Chr5g0421521 42.793 444 226 7 334 763 302 731 9.13e-103 344
Msa0034210 MtrunA17_Chr5g0421591 45.918 392 194 5 376 763 354 731 3.97e-102 341
Msa0034210 MtrunA17_Chr2g0312631 42.955 440 219 9 354 775 334 759 8.61e-101 340
Msa0034210 MtrunA17_Chr1g0191851 47.594 374 172 5 382 747 133 490 1.43e-100 333
Msa0034210 MtrunA17_Chr1g0192491 60.150 266 99 1 4 262 9 274 1.51e-99 315
Msa0034210 MtrunA17_Chr7g0272871 45.722 374 191 4 376 747 107 470 3.13e-94 315
Msa0034210 MtrunA17_Chr2g0319271 43.979 382 171 11 384 739 387 751 2.50e-87 297
Msa0034210 MtrunA17_Chr4g0042061 44.709 378 173 11 384 739 420 783 3.90e-85 292
Msa0034210 MtrunA17_Chr2g0280421 43.514 370 168 10 384 734 425 772 1.14e-84 290
Msa0034210 MtrunA17_Chr8g0386891 70.899 189 55 0 576 764 4 192 1.47e-83 276
Msa0034210 MtrunA17_Chr6g0484501 63.208 212 77 1 554 764 11 222 1.17e-76 251
Msa0034210 MtrunA17_Chr8g0386901 55.745 235 97 3 324 556 411 640 1.76e-76 265
Msa0034210 MtrunA17_Chr4g0049011 40.054 372 190 8 384 735 267 625 2.45e-76 263
Msa0034210 MtrunA17_Chr5g0407791 38.557 402 231 7 360 759 853 1240 1.90e-74 268
Msa0034210 MtrunA17_Chr6g0484511 52.679 224 100 2 334 556 227 445 9.58e-74 252
Msa0034210 MtrunA17_Chr8g0369881 39.084 371 211 5 360 728 839 1196 2.86e-71 258
Msa0034210 MtrunA17_Chr8g0390981 51.681 238 108 3 334 569 453 685 4.23e-70 247
Msa0034210 MtrunA17_Chr8g0390991 65.079 189 63 1 576 764 4 189 8.71e-69 240
Msa0034210 MtrunA17_Chr1g0191181 41.828 361 187 9 377 729 69 414 1.52e-65 233
Msa0034210 MtrunA17_Chr4g0069141 36.321 424 209 14 401 787 153 552 3.23e-59 223
Msa0034210 MtrunA17_Chr4g0045381 38.947 380 202 12 398 757 190 559 8.36e-59 221
Msa0034210 MtrunA17_Chr2g0322291 40.263 380 193 13 401 758 88 455 1.96e-58 219
Msa0034210 MtrunA17_Chr3g0122121 37.783 397 206 12 402 772 99 480 5.22e-58 218
Msa0034210 MtrunA17_Chr3g0132921 32.668 401 231 8 399 768 7 399 1.17e-57 207
Msa0034210 MtrunA17_Chr8g0367581 36.386 415 214 16 379 774 129 512 1.01e-56 214
Msa0034210 MtrunA17_Chr5g0398521 37.151 358 189 9 398 729 54 401 7.87e-55 206
Msa0034210 MtrunA17_Chr3g0134191 33.086 405 226 10 402 769 9 405 3.69e-54 205
Msa0034210 MtrunA17_Chr7g0266631 35.176 398 225 11 393 762 1 393 5.54e-54 204
Msa0034210 MtrunA17_Chr1g0178411 36.648 352 195 8 401 728 13 360 5.85e-54 204
Msa0034210 MtrunA17_Chr1g0182151 37.429 350 191 9 401 728 54 397 1.15e-53 204
Msa0034210 MtrunA17_Chr8g0377731 37.731 379 200 10 402 758 56 420 1.50e-53 204
Msa0034210 MtrunA17_Chr5g0427481 34.197 386 212 11 399 756 15 386 3.89e-53 202
Msa0034210 MtrunA17_Chr2g0327581 34.896 384 224 12 401 762 49 428 4.26e-53 202
Msa0034210 MtrunA17_Chr4g0053211 34.243 403 214 13 401 761 12 405 1.19e-52 200
Msa0034210 MtrunA17_Chr2g0307481 36.800 375 212 10 402 764 69 430 2.29e-52 195
Msa0034210 MtrunA17_Chr1g0153061 34.005 397 217 12 402 761 9 397 2.71e-52 199
Msa0034210 MtrunA17_Chr1g0193221 37.736 371 197 11 402 756 4 356 5.68e-52 199
Msa0034210 MtrunA17_Chr4g0062291 39.088 307 172 6 443 744 174 470 1.72e-51 193
Msa0034210 MtrunA17_Chr1g0152231 36.639 363 200 10 402 748 4 352 2.98e-51 194
Msa0034210 MtrunA17_Chr7g0245931 35.537 363 195 9 394 729 45 395 5.21e-51 194
Msa0034210 MtrunA17_Chr5g0405181 36.729 373 199 13 402 756 21 374 2.38e-49 190
Msa0034210 MtrunA17_Chr8g0372171 36.533 375 201 14 402 758 20 375 6.21e-48 186
Msa0034210 MtrunA17_Chr4g0036001 35.450 378 214 11 394 756 14 376 2.49e-47 183
Msa0034210 MtrunA17_Chr6g0483701 37.425 334 179 12 435 756 67 382 5.35e-47 182
Msa0034210 MtrunA17_Chr4g0070001 33.598 378 226 11 395 764 136 496 1.41e-44 175
Msa0034210 MtrunA17_Chr3g0145071 35.262 363 213 11 401 756 99 446 2.97e-44 174
Msa0034210 MtrunA17_Chr4g0035661 34.121 381 215 12 390 756 78 436 8.21e-44 172
Msa0034210 MtrunA17_Chr7g0258991 33.592 387 223 11 384 756 56 422 1.06e-43 172
Msa0034210 MtrunA17_Chr3g0142261 35.494 324 181 10 444 756 66 372 1.06e-43 173
Msa0034210 MtrunA17_Chr5g0445211 31.899 395 231 11 401 772 74 453 3.92e-42 167
Msa0034210 MtrunA17_Chr3g0101021 33.898 354 206 11 441 772 104 451 2.47e-40 162
Msa0034210 MtrunA17_Chr7g0238581 31.608 367 188 14 393 732 16 346 6.17e-35 142
Msa0034210 MtrunA17_Chr2g0331761 31.081 296 182 6 442 731 232 511 2.57e-34 141
Msa0034210 MtrunA17_Chr4g0067421 32.459 305 170 8 442 728 253 539 6.51e-34 140
Msa0034210 MtrunA17_Chr2g0295881 32.131 305 173 7 442 728 245 533 7.54e-34 140
Msa0034210 MtrunA17_Chr6g0485471 30.405 296 184 6 442 731 162 441 3.83e-33 137
Msa0034210 MtrunA17_Chr1g0187411 31.034 319 178 10 441 731 167 471 5.91e-28 121
Msa0034210 MtrunA17_Chr6g0470541 28.483 323 187 16 402 707 6 301 1.40e-17 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0034210 AT2G47500.1 64.405 1017 307 12 2 1011 9 977 0.0 1251
Msa0034210 AT2G47500.2 65.542 978 285 11 2 972 9 941 0.0 1236
Msa0034210 AT5G27000.1 55.675 1022 374 25 4 1001 11 977 0.0 1034
Msa0034210 AT1G09170.5 49.046 1048 448 25 6 999 10 1025 0.0 907
Msa0034210 AT1G09170.2 57.089 790 297 10 6 760 10 792 0.0 894
Msa0034210 AT1G09170.4 57.089 790 297 10 6 760 10 792 0.0 894
Msa0034210 AT1G09170.3 56.483 779 297 10 6 749 10 781 0.0 873
Msa0034210 AT1G09170.7 56.483 779 297 10 6 749 10 781 0.0 873
Msa0034210 AT1G09170.1 46.947 1048 434 25 6 999 10 989 0.0 845
Msa0034210 AT1G09170.6 54.683 726 287 10 6 696 10 728 0.0 787
Msa0034210 AT1G09170.8 54.683 726 287 10 6 696 10 728 0.0 787
Msa0034210 AT3G44730.2 49.528 848 362 19 25 825 21 849 0.0 751
Msa0034210 AT3G44730.3 49.528 848 362 19 25 825 21 849 0.0 751
Msa0034210 AT3G44730.1 49.267 818 350 17 55 825 5 804 0.0 721
Msa0034210 AT3G44730.4 49.267 818 350 17 55 825 5 804 0.0 721
Msa0034210 AT3G10310.2 46.429 784 360 20 21 783 3 747 0.0 601
Msa0034210 AT3G10310.1 46.429 784 360 20 21 783 3 747 0.0 601
Msa0034210 AT1G73860.2 58.315 451 180 4 316 764 347 791 3.61e-173 531
Msa0034210 AT1G73860.1 58.315 451 180 4 316 764 430 874 7.00e-172 530
Msa0034210 AT1G18410.3 58.980 451 176 5 316 764 410 853 3.10e-171 528
Msa0034210 AT1G18410.2 58.980 451 176 5 316 764 410 853 3.10e-171 528
Msa0034210 AT1G18410.4 58.980 451 176 5 316 764 553 996 1.55e-169 528
Msa0034210 AT1G18410.1 58.758 451 169 6 316 764 553 988 1.12e-166 520
Msa0034210 AT1G63640.5 57.456 456 183 5 315 765 378 827 3.07e-166 516
Msa0034210 AT1G63640.1 57.456 456 183 5 315 765 388 837 3.49e-166 516
Msa0034210 AT1G63640.4 57.456 456 183 5 315 765 388 837 3.49e-166 516
Msa0034210 AT1G63640.3 57.456 456 183 5 315 765 388 837 3.66e-166 516
Msa0034210 AT1G63640.2 57.456 456 176 5 315 765 388 830 3.00e-165 514
Msa0034210 AT1G18410.5 58.093 451 167 7 316 764 400 830 5.60e-164 508
Msa0034210 AT5G41310.1 52.772 487 197 6 283 764 310 768 6.67e-161 499
Msa0034210 AT2G22610.3 45.750 400 190 7 384 773 406 788 1.02e-99 338
Msa0034210 AT2G22610.2 45.750 400 190 7 384 773 405 787 1.11e-99 338
Msa0034210 AT2G22610.1 45.750 400 190 7 384 773 405 787 1.41e-99 338
Msa0034210 AT5G27550.2 45.910 379 183 4 382 753 118 481 1.37e-98 328
Msa0034210 AT5G27550.1 45.910 379 183 4 382 753 118 481 1.37e-98 328
Msa0034210 AT1G72250.1 44.988 409 194 7 381 775 476 867 1.72e-98 337
Msa0034210 AT1G72250.2 44.988 409 194 7 381 775 485 876 2.05e-98 337
Msa0034210 AT1G72250.3 44.988 409 194 7 381 775 497 888 2.55e-98 337
Msa0034210 AT1G72250.4 44.988 409 194 7 381 775 496 887 2.59e-98 337
Msa0034210 AT5G54670.3 45.109 368 173 8 384 734 324 679 2.05e-91 307
Msa0034210 AT4G27180.1 46.092 371 163 8 384 733 375 729 2.97e-91 308
Msa0034210 AT4G27180.2 46.092 371 163 8 384 733 375 729 2.97e-91 308
Msa0034210 AT5G54670.1 45.109 368 173 8 384 734 384 739 9.02e-91 306
Msa0034210 AT5G54670.2 45.109 368 173 8 384 734 384 739 9.02e-91 306
Msa0034210 AT4G05190.2 41.895 401 198 8 358 734 373 762 1.08e-84 290
Msa0034210 AT4G05190.1 41.895 401 198 8 358 734 386 775 1.96e-84 290
Msa0034210 AT4G21270.1 43.236 377 171 9 384 734 419 778 8.50e-82 283
Msa0034210 AT1G55550.1 36.092 435 238 7 384 794 79 497 2.95e-75 266
Msa0034210 AT5G65930.2 41.449 345 191 4 384 728 876 1209 4.15e-74 268
Msa0034210 AT5G65930.3 41.449 345 191 4 384 728 882 1215 4.19e-74 268
Msa0034210 AT5G65930.1 41.449 345 191 4 384 728 875 1208 4.36e-74 268
Msa0034210 AT5G27950.1 41.989 362 180 10 380 729 62 405 8.29e-67 237
Msa0034210 AT3G17360.1 36.543 457 241 17 445 879 210 639 7.44e-62 231
Msa0034210 AT3G17360.3 36.543 457 241 17 445 879 210 639 8.53e-62 231
Msa0034210 AT3G17360.2 36.245 458 249 16 445 879 210 647 1.12e-61 231
Msa0034210 AT3G44050.1 38.482 382 203 11 401 761 93 463 2.67e-58 219
Msa0034210 AT3G19050.1 42.724 323 161 10 445 749 235 551 4.97e-58 219
Msa0034210 AT2G36200.1 36.154 390 216 12 401 762 12 396 1.74e-55 209
Msa0034210 AT2G37420.1 40.514 311 157 8 438 728 88 390 2.37e-55 209
Msa0034210 AT2G37420.2 40.514 311 157 8 438 728 88 390 2.37e-55 209
Msa0034210 AT2G36200.2 36.154 390 216 12 401 762 12 396 2.44e-55 209
Msa0034210 AT3G63480.2 39.236 288 164 4 444 724 47 330 2.75e-55 199
Msa0034210 AT3G23670.2 36.908 401 212 10 384 758 76 461 2.78e-55 209
Msa0034210 AT3G23670.1 36.908 401 212 10 384 758 76 461 5.46e-55 209
Msa0034210 AT5G65460.6 33.827 405 223 12 379 762 121 501 6.65e-55 208
Msa0034210 AT5G65460.2 33.827 405 223 12 379 762 121 501 9.03e-55 208
Msa0034210 AT5G65460.1 33.827 405 223 12 379 762 121 501 1.14e-54 208
Msa0034210 AT5G65460.4 33.827 405 223 12 379 762 121 501 1.48e-54 207
Msa0034210 AT3G63480.1 39.726 292 161 6 444 724 47 334 1.70e-54 197
Msa0034210 AT5G65460.3 33.824 408 226 12 379 762 121 508 4.26e-54 206
Msa0034210 AT1G59540.1 36.438 365 209 11 402 756 4 355 2.18e-53 201
Msa0034210 AT4G14150.1 35.930 398 216 10 384 758 75 456 2.31e-53 204
Msa0034210 AT5G47820.2 33.085 402 220 11 401 761 11 404 2.43e-53 203
Msa0034210 AT5G47820.1 33.085 402 220 11 401 761 11 404 2.43e-53 203
Msa0034210 AT2G28620.3 35.476 389 215 12 401 762 50 429 4.12e-53 202
Msa0034210 AT2G28620.2 35.476 389 215 12 401 762 50 429 4.12e-53 202
Msa0034210 AT2G28620.1 35.476 389 215 12 401 762 50 429 5.15e-53 202
Msa0034210 AT4G24170.1 36.043 369 203 10 402 756 7 356 9.05e-52 198
Msa0034210 AT4G24170.2 36.043 369 203 10 402 756 7 356 9.05e-52 198
Msa0034210 AT5G60930.1 29.094 574 325 16 399 934 4 533 3.31e-51 197
Msa0034210 AT5G60930.2 29.094 574 325 16 399 934 4 533 3.92e-51 197
Msa0034210 AT5G60930.3 29.094 574 325 16 399 934 4 533 6.66e-51 196
Msa0034210 AT4G38950.3 35.641 390 221 11 402 781 14 383 1.09e-50 193
Msa0034210 AT4G38950.5 35.641 390 221 11 402 781 14 383 1.09e-50 193
Msa0034210 AT4G38950.4 35.641 390 221 11 402 781 14 383 1.09e-50 193
Msa0034210 AT4G38950.1 35.641 390 221 11 402 781 14 383 1.09e-50 193
Msa0034210 AT4G38950.2 35.641 390 221 11 402 781 14 383 1.09e-50 193
Msa0034210 AT1G12430.1 38.535 314 164 6 437 729 108 413 1.27e-50 194
Msa0034210 AT1G12430.2 38.535 314 164 6 437 729 108 413 1.28e-50 194
Msa0034210 AT3G50240.2 33.333 393 217 12 402 757 26 410 1.54e-50 194
Msa0034210 AT3G50240.4 33.333 393 217 12 402 757 26 410 1.85e-50 194
Msa0034210 AT3G50240.1 33.333 393 217 12 402 757 26 410 2.00e-50 194
Msa0034210 AT5G10470.2 35.057 348 204 8 379 724 125 452 4.55e-50 193
Msa0034210 AT5G10470.1 35.057 348 204 8 379 724 125 452 4.66e-50 193
Msa0034210 AT3G49650.1 33.333 339 206 5 437 763 58 388 6.36e-50 191
Msa0034210 AT1G01950.2 35.655 359 196 10 396 729 55 403 1.16e-49 191
Msa0034210 AT1G01950.1 35.655 359 196 10 396 729 55 403 1.25e-49 191
Msa0034210 AT1G18550.1 36.795 337 187 8 443 763 202 528 1.38e-49 188
Msa0034210 AT1G01950.3 35.655 359 196 10 396 729 55 403 1.38e-49 191
Msa0034210 AT3G45850.2 34.896 384 222 13 402 762 56 434 3.16e-49 190
Msa0034210 AT3G45850.1 34.896 384 222 13 402 762 56 434 3.16e-49 190
Msa0034210 AT1G18370.1 39.815 324 163 12 444 754 77 381 6.83e-49 189
Msa0034210 AT2G21300.2 35.422 367 210 10 402 756 25 376 1.94e-48 186
Msa0034210 AT2G21300.4 35.422 367 210 10 402 756 25 376 1.94e-48 186
Msa0034210 AT2G21300.3 35.422 367 210 10 402 756 25 376 1.94e-48 186
Msa0034210 AT2G21300.1 35.422 367 210 10 402 756 25 376 1.94e-48 186
Msa0034210 AT2G21300.5 35.422 367 210 10 402 756 25 376 1.94e-48 186
Msa0034210 AT3G43210.3 37.368 380 205 14 395 760 22 382 7.72e-48 185
Msa0034210 AT3G43210.5 37.368 380 205 14 395 760 22 382 7.72e-48 185
Msa0034210 AT3G43210.2 37.368 380 205 14 395 760 22 382 7.72e-48 185
Msa0034210 AT3G43210.4 37.368 380 205 14 395 760 22 382 7.72e-48 185
Msa0034210 AT3G43210.1 37.368 380 205 14 395 760 22 382 7.72e-48 185
Msa0034210 AT3G54870.3 35.806 310 171 8 437 728 142 441 8.29e-48 185
Msa0034210 AT3G54870.1 35.806 310 171 8 437 728 142 441 8.63e-48 185
Msa0034210 AT3G54870.2 35.484 310 172 7 437 728 142 441 1.19e-47 185
Msa0034210 AT5G66310.2 36.646 322 180 9 444 756 66 372 3.37e-47 184
Msa0034210 AT5G66310.3 36.646 322 180 9 444 756 66 372 3.37e-47 184
Msa0034210 AT5G66310.1 36.646 322 180 9 444 756 66 372 3.37e-47 184
Msa0034210 AT3G51150.1 36.533 323 181 8 444 757 65 372 6.44e-47 183
Msa0034210 AT3G51150.2 36.533 323 181 8 444 757 65 372 6.88e-47 183
Msa0034210 AT3G51150.4 36.533 323 181 8 444 757 65 372 6.88e-47 183
Msa0034210 AT3G51150.3 36.533 323 181 8 444 757 65 372 6.88e-47 183
Msa0034210 AT3G10180.2 36.729 373 199 12 402 756 4 357 2.74e-46 181
Msa0034210 AT3G10180.1 36.729 373 199 12 402 756 4 357 3.87e-46 181
Msa0034210 AT4G39050.1 37.500 320 181 10 444 756 138 445 3.13e-45 177
Msa0034210 AT2G21380.2 36.562 320 184 10 444 756 144 451 3.39e-45 177
Msa0034210 AT2G21380.1 36.562 320 184 10 444 756 144 451 3.39e-45 177
Msa0034210 AT1G21730.1 35.185 378 216 12 397 762 71 431 1.29e-44 175
Msa0034210 AT5G06670.5 35.976 328 184 9 444 756 106 422 3.20e-44 172
Msa0034210 AT5G06670.8 35.976 328 184 9 444 756 106 422 3.54e-44 172
Msa0034210 AT5G06670.4 35.976 328 184 9 444 756 106 422 3.54e-44 172
Msa0034210 AT5G06670.7 35.976 328 184 9 444 756 106 422 3.54e-44 172
Msa0034210 AT5G06670.2 35.976 328 184 9 444 756 106 422 1.98e-43 172
Msa0034210 AT5G06670.3 35.976 328 184 9 444 756 106 422 1.98e-43 172
Msa0034210 AT5G06670.6 35.312 337 183 10 444 756 106 431 5.29e-42 167
Msa0034210 AT5G06670.1 35.312 337 183 10 444 756 106 431 5.29e-42 167
Msa0034210 AT1G01950.4 38.889 270 137 6 480 729 1 262 2.94e-41 163
Msa0034210 AT3G50240.3 36.246 309 159 10 484 757 3 308 4.43e-41 164
Msa0034210 AT3G12020.4 36.000 325 182 10 444 753 109 422 1.21e-40 163
Msa0034210 AT3G12020.1 36.000 325 182 10 444 753 109 422 1.21e-40 163
Msa0034210 AT3G12020.3 36.000 325 182 10 444 753 109 422 1.53e-40 162
Msa0034210 AT3G12020.2 36.000 325 182 10 444 753 109 422 1.53e-40 162
Msa0034210 AT1G59540.2 37.363 273 152 9 493 756 1 263 6.65e-38 153
Msa0034210 AT3G20150.2 34.091 352 195 13 443 767 134 475 1.87e-37 153
Msa0034210 AT3G20150.1 34.091 352 195 13 443 767 134 475 2.36e-37 152
Msa0034210 AT5G27950.2 39.669 242 128 6 500 729 4 239 2.20e-36 144
Msa0034210 AT3G16060.1 29.570 372 221 9 378 733 151 497 7.86e-35 143
Msa0034210 AT3G16630.2 29.972 357 212 10 394 728 186 526 4.17e-34 141
Msa0034210 AT3G16630.1 29.972 357 212 10 394 728 186 526 4.17e-34 141
Msa0034210 AT5G02370.1 31.579 342 191 9 401 724 20 336 2.17e-33 137
Msa0034210 AT5G42490.2 34.828 290 154 10 394 671 6 272 3.22e-32 136
Msa0034210 AT5G42490.1 34.828 290 154 10 394 671 6 272 3.32e-32 136
Msa0034210 AT4G14330.1 32.362 309 182 9 441 738 85 377 6.23e-32 135
Msa0034210 AT3G51150.5 38.916 203 116 4 563 757 17 219 2.88e-27 120
Msa0034210 AT5G65460.5 33.984 256 137 7 526 762 13 255 1.10e-26 118
Msa0034210 AT5G23910.2 26.471 306 200 9 430 734 44 325 1.71e-19 94.7
Msa0034210 AT5G23910.1 26.471 306 200 9 430 734 40 321 1.73e-19 94.7

Find 250 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTCACTATAGGATTTA+AGG 0.095452 1_1:+62146474 None:intergenic
TGAAAATGTTAGAAACTTTC+TGG 0.118054 1_1:-62146760 Msa0034210:CDS
AGCAAAGTATTTACCTAAAT+TGG 0.136829 1_1:+62144999 None:intergenic
TTGTTTAATCAGGAAGTATT+AGG 0.173618 1_1:-62144694 Msa0034210:intron
GCAGTCTAGTTCTCATTCTT+TGG 0.179747 1_1:-62146181 Msa0034210:intron
TATTTAACATTAGAGCTTTC+AGG 0.197880 1_1:-62141506 Msa0034210:three_prime_UTR
GGCTTAGCTCATGCTGCTTC+TGG 0.218020 1_1:-62144864 Msa0034210:CDS
TTCAACTTCAACAAAGTCTT+TGG 0.227045 1_1:-62144548 Msa0034210:CDS
ATCGGCTGCTACGGTCATTA+AGG 0.248332 1_1:+62143708 None:intergenic
CACGAGGAGTTCTCCAATTT+AGG 0.260528 1_1:-62145012 Msa0034210:intron
AACAAATCTCTTTCAGCTTT+GGG 0.274588 1_1:-62143434 Msa0034210:CDS
TGTTGTATTTACACAGATAA+TGG 0.279167 1_1:-62141571 Msa0034210:three_prime_UTR
CGAGTAAGACCTTTCTTATC+TGG 0.281087 1_1:-62144662 Msa0034210:CDS
ACTGGAGCTGGTTGCCTTGT+TGG 0.285741 1_1:+62141793 None:intergenic
GCTAATGGTGTATGGAAATT+TGG 0.292995 1_1:-62146440 Msa0034210:CDS
CAGTCTAGTTCTCATTCTTT+GGG 0.293355 1_1:-62146180 Msa0034210:CDS
AATTTAGAACATTCTATATC+TGG 0.297913 1_1:-62142915 Msa0034210:CDS
TAACAAATCTCTTTCAGCTT+TGG 0.302511 1_1:-62143435 Msa0034210:CDS
CAATGAAGTCCAGGATCTTA+AGG 0.313316 1_1:-62144805 Msa0034210:CDS
CTTAAGGGTAATAAGATTAC+TGG 0.318043 1_1:-62144789 Msa0034210:intron
CTTGACAAAGAATTGGTAAA+TGG 0.318695 1_1:+62146362 None:intergenic
GGCAACCAGTTTAACATTGC+TGG 0.319385 1_1:-62142308 Msa0034210:CDS
TGATGTCGAGTCTAATAAAA+TGG 0.321854 1_1:-62146297 Msa0034210:intron
CGCCCTTTCCCATTCTTTGA+GGG 0.330150 1_1:+62144578 None:intergenic
AAAGCCAAGGTGTAAATTAC+AGG 0.341060 1_1:-62144128 Msa0034210:CDS
AGGTAGGAATTCCAATTTCC+TGG 0.342578 1_1:+62146730 None:intergenic
CCAGTTTAACATTGCTGGTT+CGG 0.343097 1_1:-62142303 Msa0034210:CDS
CCATTTGTTTGTTTCCTTGA+AGG 0.345907 1_1:+62141832 None:intergenic
GCCTCTCATGAACATATTAT+AGG 0.347422 1_1:+62142328 None:intergenic
CATCAGAACATGACTTGCTT+TGG 0.348531 1_1:-62142244 Msa0034210:CDS
GGGTGTTGGGAAGCAGATAA+TGG 0.350245 1_1:-62142416 Msa0034210:CDS
TATAGTGAATGGAAACAAAC+TGG 0.351051 1_1:-62146464 Msa0034210:CDS
CTTACCGTAGGAACTTCTTC+TGG 0.354763 1_1:+62146123 None:intergenic
CCATTCACTATAGGATTTAA+GGG 0.356112 1_1:+62146475 None:intergenic
TTGAGTTCTTTGTCTCGATA+TGG 0.357001 1_1:+62142601 None:intergenic
AAAGACTTTGTTGAAGTTGA+AGG 0.358638 1_1:+62144550 None:intergenic
GACATCTGGAGCTGTCTTAC+GGG 0.363400 1_1:-62143546 Msa0034210:CDS
CAACTCCTTCCCACATGCTT+CGG 0.364129 1_1:+62147692 None:intergenic
CTGCCCCATCCTTGTTGACT+CGG 0.365037 1_1:+62143094 None:intergenic
AAACTTTCTGGTGGCTATCC+AGG 0.365478 1_1:-62146748 Msa0034210:CDS
AAAACTTACCAAGTGAATCT+TGG 0.366053 1_1:+62143339 None:intergenic
TGTTTAATCAGGAAGTATTA+GGG 0.366153 1_1:-62144693 Msa0034210:intron
CTGATATGCAGCCACTTGTT+AGG 0.366564 1_1:-62144413 Msa0034210:CDS
CTGGTGGCTATCCAGGAAAT+TGG 0.366578 1_1:-62146741 Msa0034210:CDS
GTTGACATGAAACGTAAAAC+TGG 0.370072 1_1:-62141772 Msa0034210:CDS
AGGAACAAACAAATAATAAA+AGG 0.370114 1_1:+62141691 None:intergenic
AGTTTGTTTCCATTCACTAT+AGG 0.370258 1_1:+62146466 None:intergenic
TCGTCTTAAAGATCTTGATT+TGG 0.370539 1_1:-62147228 Msa0034210:CDS
TTCTCCAACAGCATTGGCCT+CGG 0.372109 1_1:+62143173 None:intergenic
ACTATCTCTCTTTGTTGCTT+CGG 0.379839 1_1:+62147662 None:intergenic
GATTGATGTTGGCAACTTAG+AGG 0.384355 1_1:-62142787 Msa0034210:intron
TTCTTGCCAATGCTGCCTTA+AGG 0.390471 1_1:+62142946 None:intergenic
CTACTGCTCCTTCACCTTCA+AGG 0.390953 1_1:-62141846 Msa0034210:CDS
TGTTCTTAACAAGGTTCATC+CGG 0.391884 1_1:-62146950 Msa0034210:CDS
CCGAACCAGCAATGTTAAAC+TGG 0.392287 1_1:+62142303 None:intergenic
GCGCCCTTTCCCATTCTTTG+AGG 0.394470 1_1:+62144577 None:intergenic
TGAGCAAGTCAGAGATCTAT+TGG 0.396757 1_1:-62144019 Msa0034210:CDS
CATTCTATATCTGGAAGCTC+TGG 0.416237 1_1:-62142906 Msa0034210:CDS
TCCACGGTACTCGAATGATT+TGG 0.419332 1_1:+62144635 None:intergenic
TGCTTGACTGTACATGTTCA+AGG 0.421405 1_1:-62143578 Msa0034210:CDS
AAATACTGAAAAGCAGATAA+TGG 0.421522 1_1:+62146783 None:intergenic
AGCCTTCTGAGGAAGAGTTT+AGG 0.424022 1_1:-62147005 Msa0034210:CDS
GCTTACGGCCAAACAGGATC+AGG 0.424727 1_1:-62144357 Msa0034210:CDS
CATGAACTGCATACCAGCTT+TGG 0.425873 1_1:+62145047 None:intergenic
ATTAATGTTCCCTCAAAGAA+TGG 0.427785 1_1:-62144587 Msa0034210:CDS
GCAGATAATGGCGCTCCATC+GGG 0.427834 1_1:+62146795 None:intergenic
ACAGTTGGTTGAATCTGTTT+TGG 0.428273 1_1:-62145672 Msa0034210:intron
AGAGGTCCTTGACAAAGAAT+TGG 0.435919 1_1:+62146355 None:intergenic
GTTTCAGATTGCCAGCCTTA+AGG 0.436181 1_1:-62142961 Msa0034210:intron
TGGTAACATGTTAGGGTGTT+GGG 0.437816 1_1:-62142429 Msa0034210:CDS
GTGAGTTTGCTATTTCTGTA+AGG 0.441257 1_1:+62143371 None:intergenic
AATGAAGTCCAGGATCTTAA+GGG 0.442261 1_1:-62144804 Msa0034210:CDS
CAAGGAAGAGACTTGACATC+TGG 0.442958 1_1:-62143560 Msa0034210:CDS
GAAGCAACAAAGAGAGATAG+TGG 0.446472 1_1:-62147660 Msa0034210:five_prime_UTR
CCCTTAAATCCTATAGTGAA+TGG 0.447079 1_1:-62146475 Msa0034210:CDS
TGACATCTGGAGCTGTCTTA+CGG 0.447398 1_1:-62143547 Msa0034210:CDS
ATATTTGCTTACGGCCAAAC+AGG 0.449662 1_1:-62144363 Msa0034210:CDS
TCTCCAACAGCATTGGCCTC+GGG 0.454242 1_1:+62143174 None:intergenic
ACCCTTTGATTCATGTCCGT+TGG 0.457390 1_1:+62142190 None:intergenic
AACAAGACTGGTAACATGTT+AGG 0.459081 1_1:-62142437 Msa0034210:CDS
CGTCAAAGAGCTCAAAGAAC+AGG 0.459647 1_1:-62143070 Msa0034210:intron
CATTACAAGCCAAGATGAAC+TGG 0.460521 1_1:-62145621 Msa0034210:intron
AGCAGATAATGGCGCTCCAT+CGG 0.461774 1_1:+62146794 None:intergenic
TCTTATTACCCTTAAGATCC+TGG 0.463135 1_1:+62144796 None:intergenic
GCCCGCTGGCTTGCATGATA+AGG 0.463420 1_1:+62142852 None:intergenic
AATTGGAATTCCTACCTTTG+AGG 0.464052 1_1:-62146724 Msa0034210:CDS
TGGAAACAAACTGGGGCTAA+TGG 0.464682 1_1:-62146455 Msa0034210:CDS
TCGGCTGCTACGGTCATTAA+GGG 0.465945 1_1:+62143709 None:intergenic
TCATGCCATGTACAAGCAAC+GGG 0.466768 1_1:+62141538 None:intergenic
AAATTTATGTCTTATATCCC+TGG 0.467256 1_1:-62141432 None:intergenic
TACAGGAGAGTGGGTTGATA+AGG 0.467459 1_1:-62142483 Msa0034210:CDS
CTGGTAACATGTTAGGGTGT+TGG 0.468558 1_1:-62142430 Msa0034210:CDS
CGTTTCATGTCAACTGGAGC+TGG 0.468835 1_1:+62141781 None:intergenic
TTAGGCTTGGTTTGAGAAGT+GGG 0.471557 1_1:-62146987 Msa0034210:CDS
GGATCGTTCTGAGTATACTT+TGG 0.472506 1_1:+62142349 None:intergenic
GGTGTTGGGAAGCAGATAAT+GGG 0.474927 1_1:-62142415 Msa0034210:CDS
CCAGCGGGCTGCAGATATCA+TGG 0.475683 1_1:-62142838 Msa0034210:CDS
TCTTCCTCAGAAGGCTCTGC+TGG 0.476392 1_1:+62147012 None:intergenic
TGCCAATGCTGCCTTAAGGC+TGG 0.477104 1_1:+62142950 None:intergenic
TGCCAGCCTTAAGGCAGCAT+TGG 0.477178 1_1:-62142952 Msa0034210:CDS
GTTTGGAACATAGTGGGGTT+CGG 0.478080 1_1:-62147717 Msa0034210:five_prime_UTR
TTTATAGGCATGCACATTCA+CGG 0.478168 1_1:-62144885 Msa0034210:intron
GAACTGCATACCAGCTTTGG+TGG 0.479749 1_1:+62145050 None:intergenic
TCTGAGGAAGAGTTTAGGCT+TGG 0.480056 1_1:-62147000 Msa0034210:CDS
AGAGTGGGTTGATAAGGTTA+TGG 0.481612 1_1:-62142477 Msa0034210:CDS
GTGAACAAACATTAGTGTCT+TGG 0.482148 1_1:+62143203 None:intergenic
GATATCATGGATGATCCCTT+TGG 0.484586 1_1:-62142825 Msa0034210:CDS
TAAGGCAGCATTGGCAAGAA+AGG 0.485960 1_1:-62142943 Msa0034210:CDS
CACTGGTTGCCGGCATCCAA+AGG 0.486861 1_1:+62142809 None:intergenic
AGTATCATACCAGTTCATCT+TGG 0.487526 1_1:+62145612 None:intergenic
AGGAAACCGGTACAGGAGAG+TGG 0.489309 1_1:-62142493 Msa0034210:CDS
ACCTGTGAGATCGGCTGCTA+CGG 0.491250 1_1:+62143699 None:intergenic
AAACTGGGGCTAATGGTGTA+TGG 0.492107 1_1:-62146448 Msa0034210:CDS
CAACATCAATCACTGGTTGC+CGG 0.493007 1_1:+62142799 None:intergenic
GGGATTAGTGCAGAATCAAC+AGG 0.493427 1_1:+62146816 None:intergenic
TGTTATTGAACTAATGAACT+TGG 0.493700 1_1:-62143762 Msa0034210:CDS
TTAAGAAGATATGAAGCAGC+AGG 0.495720 1_1:-62147078 Msa0034210:CDS
AATGTTTGCATATTTGCTTA+CGG 0.497791 1_1:-62144372 Msa0034210:CDS
GTATGAAAGAGGATGATGTT+TGG 0.499520 1_1:-62147734 None:intergenic
AAGAGAGATAGTGGGAGGAG+AGG 0.499752 1_1:-62147651 Msa0034210:five_prime_UTR
CTTGTTAGGTCTGTGCTCGA+TGG 0.501110 1_1:-62144399 Msa0034210:CDS
TGCCCCATCCTTGTTGACTC+GGG 0.501518 1_1:+62143095 None:intergenic
ACTTGAACAAGGCTTGCATC+TGG 0.501874 1_1:+62143800 None:intergenic
TGGATGATCCCTTTGGATGC+CGG 0.503861 1_1:-62142818 Msa0034210:CDS
TATTTCTGTAAGGGACATGT+TGG 0.504849 1_1:+62143381 None:intergenic
GCTGCCCGAGTCAACAAGGA+TGG 0.505773 1_1:-62143099 Msa0034210:CDS
AATTGTTTCTCCAACAGCAT+TGG 0.507069 1_1:+62143167 None:intergenic
AAGGATTGTGAGTAGTGTAT+TGG 0.507645 1_1:-62146498 Msa0034210:CDS
TTTAGGCTTGGTTTGAGAAG+TGG 0.507792 1_1:-62146988 Msa0034210:CDS
ATGCATCTCGTTGACTTGGC+AGG 0.508762 1_1:-62143518 Msa0034210:CDS
AAATTGTGTGGAAGACGATA+AGG 0.509546 1_1:-62142513 Msa0034210:CDS
TTAATGTTCCCTCAAAGAAT+GGG 0.510130 1_1:-62144586 Msa0034210:CDS
GATGATGTTTGGAACATAGT+GGG 0.512689 1_1:-62147723 Msa0034210:five_prime_UTR
CCTTCAAGGAAACAAACAAA+TGG 0.513212 1_1:-62141832 Msa0034210:CDS
TTCAGTGGCATCTGTTGTTG+AGG 0.514852 1_1:-62147273 Msa0034210:CDS
TAATGCCCGTTGCTTGTACA+TGG 0.516093 1_1:-62141543 Msa0034210:three_prime_UTR
CCATGATATCTGCAGCCCGC+TGG 0.516277 1_1:+62142838 None:intergenic
TTATACAGCGAATCAAAGAA+AGG 0.518620 1_1:-62144088 Msa0034210:CDS
TCCTATGGTAACAAAGAAAG+AGG 0.521036 1_1:-62145280 Msa0034210:CDS
ATCAACCCACTCTCCTGTAC+CGG 0.523615 1_1:+62142487 None:intergenic
GGATGATGTTTGGAACATAG+TGG 0.524459 1_1:-62147724 Msa0034210:five_prime_UTR
TGGGATAACTTCAGGAGGAC+AGG 0.526345 1_1:-62143226 Msa0034210:intron
CTGCCCGAGTCAACAAGGAT+GGG 0.526826 1_1:-62143098 Msa0034210:CDS
CGAAGCATGTGGGAAGGAGT+TGG 0.528965 1_1:-62147691 Msa0034210:five_prime_UTR
GTTTGTTTCCTTGAAGGTGA+AGG 0.529317 1_1:+62141838 None:intergenic
ACAAGACTGGTAACATGTTA+GGG 0.529408 1_1:-62142436 Msa0034210:CDS
AGGATATACACCTGTGAGAT+CGG 0.531914 1_1:+62143690 None:intergenic
GTCATGTTCTGATGAATCAC+TGG 0.532004 1_1:+62142253 None:intergenic
TCCTCTTTCTTTGTTACCAT+AGG 0.533041 1_1:+62145279 None:intergenic
ATGCATGCATCTCGTTGACT+TGG 0.535190 1_1:-62143522 Msa0034210:CDS
ACAGTTCAAACCACCAAAGC+TGG 0.535967 1_1:-62145060 Msa0034210:CDS
CTGGAAGCTCTGGAAAATGT+AGG 0.537051 1_1:-62142896 Msa0034210:CDS
ACCTTATCATGCAAGCCAGC+GGG 0.537523 1_1:-62142853 Msa0034210:CDS
TTCTAGATCAGATGCCTCAA+AGG 0.539627 1_1:+62146710 None:intergenic
GTGGAAGACGATAAGGAAAC+CGG 0.539726 1_1:-62142506 Msa0034210:CDS
TTTAGGGAGGAAAATCATCA+AGG 0.539794 1_1:-62146517 Msa0034210:intron
CAATTACTCCAAGATTCACT+TGG 0.541197 1_1:-62143347 Msa0034210:intron
GGGCTGTTGCTCCGACTGCA+CGG 0.542943 1_1:+62143729 None:intergenic
CAGCTAAAAGCACAGAATTG+AGG 0.543524 1_1:-62142148 Msa0034210:intron
AGAGATCTATTGGTTACTGA+TGG 0.546337 1_1:-62144009 Msa0034210:CDS
AGTGAAATGTCTCAAAGAGA+TGG 0.547324 1_1:-62145443 Msa0034210:CDS
CAAAGAATTGGTAAATGGCT+CGG 0.551364 1_1:+62146367 None:intergenic
TTCCCTCAAAGAATGGGAAA+GGG 0.552087 1_1:-62144580 Msa0034210:CDS
AGTCCCGAGGCCAATGCTGT+TGG 0.554966 1_1:-62143177 Msa0034210:CDS
GTCATGCCATGTACAAGCAA+CGG 0.555428 1_1:+62141537 None:intergenic
GGTGGATAACAAGATTCCTA+TGG 0.557286 1_1:-62145295 Msa0034210:CDS
ACTGGTTGCCGGCATCCAAA+GGG 0.557291 1_1:+62142810 None:intergenic
AAGTTAGATGTGAACAAGAC+TGG 0.557708 1_1:-62142449 Msa0034210:CDS
TCTAGAAAATCAGAAGAAGC+TGG 0.560090 1_1:-62147203 Msa0034210:intron
AGAGTTGCTACAGTTGAACT+TGG 0.560508 1_1:-62143123 Msa0034210:CDS
GGTCGACAAATCTGAGGCGA+CGG 0.560580 1_1:-62143486 Msa0034210:CDS
TGAGTTTGCTATTTCTGTAA+GGG 0.560724 1_1:+62143372 None:intergenic
GTTCTTAACAAGGTTCATCC+GGG 0.561305 1_1:-62146949 Msa0034210:CDS
GACGATAAGGAAACCGGTAC+AGG 0.562544 1_1:-62142500 Msa0034210:CDS
GTTCCCTCAAAGAATGGGAA+AGG 0.565328 1_1:-62144581 Msa0034210:CDS
GTCGACAAATCTGAGGCGAC+GGG 0.565704 1_1:-62143485 Msa0034210:CDS
CATTTACCAATTCTTTGTCA+AGG 0.566014 1_1:-62146361 Msa0034210:CDS
AAGTTGCCAACATCAATCAC+TGG 0.567692 1_1:+62142792 None:intergenic
TTTGGTTGTCCAGATAAGAA+AGG 0.569317 1_1:+62144653 None:intergenic
AGCCAACGGACATGAATCAA+AGG 0.569973 1_1:-62142192 Msa0034210:CDS
GCAGCATTGGCAAGAAAGGA+AGG 0.570071 1_1:-62142939 Msa0034210:CDS
TTTGGACCATCTGCAGCCCA+AGG 0.571127 1_1:-62144530 Msa0034210:intron
ACCGTAGCAGCCGATCTCAC+AGG 0.572158 1_1:-62143700 Msa0034210:intron
AACCAACCTTGGGCTGCAGA+TGG 0.574279 1_1:+62144524 None:intergenic
TCTTTGTAATGTTCTTAACA+AGG 0.574812 1_1:-62146959 Msa0034210:CDS
GAGCCCTGTAATTTACACCT+TGG 0.575443 1_1:+62144124 None:intergenic
AGCAAATGCTCTTTGATCAA+CGG 0.575718 1_1:-62145200 Msa0034210:CDS
GGGTTCGGAACCGAAGCATG+TGG 0.581338 1_1:-62147702 Msa0034210:five_prime_UTR
TGCCCGAGTCAACAAGGATG+GGG 0.582451 1_1:-62143097 Msa0034210:CDS
CAAACTATACAATGAAGTCC+AGG 0.588403 1_1:-62144814 Msa0034210:CDS
AATGGTGTATGGAAATTTGG+TGG 0.588838 1_1:-62146437 Msa0034210:CDS
GACGGGCGATAGATTGAAAG+AGG 0.592922 1_1:-62143468 Msa0034210:CDS
CACCTTATCATGCAAGCCAG+CGG 0.593447 1_1:-62142854 Msa0034210:CDS
TTGACTTGGCAGGAAGTGAG+AGG 0.593669 1_1:-62143508 Msa0034210:CDS
GCCAACGGACATGAATCAAA+GGG 0.594270 1_1:-62142191 Msa0034210:CDS
AGCCTAAACTCTTCCTCAGA+AGG 0.596157 1_1:+62147003 None:intergenic
GTGACTCCTCGTCAGCAACA+TGG 0.598453 1_1:+62145241 None:intergenic
TTTGAACAAGACTATTCACT+GGG 0.599721 1_1:+62142534 None:intergenic
AGATCAGATGCCTCAAAGGT+AGG 0.602073 1_1:+62146714 None:intergenic
GTAGGACAGCGGCTAGTGAA+CGG 0.606275 1_1:-62142878 Msa0034210:CDS
TTCGTAGTAACTCTCAAAGA+GGG 0.606354 1_1:-62143832 Msa0034210:CDS
ATAGTGAATGGAAACAAACT+GGG 0.606384 1_1:-62146463 Msa0034210:CDS
GTCACCTTGGATACAGAACC+CGG 0.607742 1_1:+62146931 None:intergenic
CGGCAACCAGTGATTGATGT+TGG 0.608755 1_1:-62142798 Msa0034210:CDS
GAAGCCAGAAGAAGTTCCTA+CGG 0.609122 1_1:-62146127 Msa0034210:intron
TCCTATAATATGTTCATGAG+AGG 0.612800 1_1:-62142329 Msa0034210:CDS
AAATGTTAGAAACTTTCTGG+TGG 0.614047 1_1:-62146757 Msa0034210:CDS
TTTATTAGACTCGACATCAG+AGG 0.616146 1_1:+62146301 None:intergenic
AAGCCAAGGTGTAAATTACA+GGG 0.618780 1_1:-62144127 Msa0034210:CDS
TGGTGCTGCCCGAGTCAACA+AGG 0.620113 1_1:-62143103 Msa0034210:CDS
TTTACCAGCAGAGCCTTCTG+AGG 0.621122 1_1:-62147016 Msa0034210:CDS
ACCGTGGAGAACATAGAAGA+TGG 0.621354 1_1:-62144620 Msa0034210:CDS
GGAAACCGGTACAGGAGAGT+GGG 0.621777 1_1:-62142492 Msa0034210:CDS
TCATCCGGGTTCTGTATCCA+AGG 0.624192 1_1:-62146935 Msa0034210:intron
GGTCATAAGAACCGTGCAGT+CGG 0.625242 1_1:-62143740 Msa0034210:CDS
GGTAGCAGCATCAACATCAT+CGG 0.626833 1_1:+62142274 None:intergenic
GTTATTGAACTAATGAACTT+GGG 0.629233 1_1:-62143761 Msa0034210:CDS
ATTCGTAGTAACTCTCAAAG+AGG 0.631495 1_1:-62143833 Msa0034210:CDS
GATTCTGCACTAATCCCCGA+TGG 0.632933 1_1:-62146810 Msa0034210:CDS
TAGTCTTGTTCAAAATTGTG+TGG 0.633315 1_1:-62142525 Msa0034210:CDS
ACCATCTTCTATGTTCTCCA+CGG 0.634195 1_1:+62144619 None:intergenic
GTTTGTTCACATTAGTCCCG+AGG 0.634780 1_1:-62143190 Msa0034210:CDS
CGGAACCGAAGCATGTGGGA+AGG 0.635189 1_1:-62147697 Msa0034210:five_prime_UTR
CATGCAAATGAAATTTCACG+AGG 0.647135 1_1:-62145028 Msa0034210:CDS
TGAGAGGGTCGACAAATCTG+AGG 0.647349 1_1:-62143492 Msa0034210:CDS
TTGTTGATGATACTTGAACA+AGG 0.647374 1_1:+62143789 None:intergenic
TCGAGCACAGACCTAACAAG+TGG 0.649204 1_1:+62144402 None:intergenic
AAGCAACAAAGAGAGATAGT+GGG 0.649294 1_1:-62147659 Msa0034210:five_prime_UTR
GTGTACAGAGCAAAAGCCAA+AGG 0.650308 1_1:-62147576 Msa0034210:intron
ACATCTGGAGCTGTCTTACG+GGG 0.650405 1_1:-62143545 Msa0034210:CDS
TTGACATGAAACGTAAAACT+GGG 0.651208 1_1:-62141771 Msa0034210:CDS
TGAACAAGACTATTCACTGG+GGG 0.651920 1_1:+62142536 None:intergenic
GAGGATGTTCTTCAACAGCA+TGG 0.652965 1_1:-62147254 Msa0034210:CDS
CAACAAAGAGAGATAGTGGG+AGG 0.654842 1_1:-62147656 Msa0034210:five_prime_UTR
ATGATGTTTGGAACATAGTG+GGG 0.657605 1_1:-62147722 Msa0034210:five_prime_UTR
ACGGACATGAATCAAAGGGT+AGG 0.658106 1_1:-62142187 Msa0034210:CDS
TGACTTGGCAGGAAGTGAGA+GGG 0.658596 1_1:-62143507 Msa0034210:CDS
AGATAATGGGAACTTATCTG+AGG 0.660079 1_1:-62142402 Msa0034210:CDS
CAGATAATGGCGCTCCATCG+GGG 0.660924 1_1:+62146796 None:intergenic
AAAGTTACAAGCGTAGCCAA+CGG 0.665101 1_1:-62142206 Msa0034210:CDS
CTCTGGAAAATGTAGGACAG+CGG 0.675648 1_1:-62142889 Msa0034210:CDS
GGTTCGGAACCGAAGCATGT+GGG 0.676772 1_1:-62147701 Msa0034210:five_prime_UTR
ACCAAATCATTCGAGTACCG+TGG 0.683949 1_1:-62144636 Msa0034210:CDS
TAAGAAGATATGAAGCAGCA+GGG 0.688225 1_1:-62147077 Msa0034210:CDS
TCGCACATCGAACACCAACA+AGG 0.688670 1_1:-62141807 Msa0034210:CDS
CATTAACAAATTCACCACCC+TGG 0.700253 1_1:-62142559 Msa0034210:CDS
TAGTGAATGGAAACAAACTG+GGG 0.713604 1_1:-62146462 Msa0034210:CDS
GAAGATATGAAGCAGCAGGG+TGG 0.738522 1_1:-62147074 Msa0034210:CDS
TTGCTGACGAGGAGTCACAG+AGG 0.755516 1_1:-62145236 Msa0034210:CDS
TTGAACAAGACTATTCACTG+GGG 0.770387 1_1:+62142535 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAAAATGATATCTTA+TGG - chr1_1:62146447-62146466 Msa0034210:CDS 10.0%
!!! ATTTACTATGAATGATTTTT+TGG - chr1_1:62142270-62142289 Msa0034210:CDS 15.0%
!!! TAAATTCTGTATTTTCTTTA+AGG - chr1_1:62142313-62142332 Msa0034210:CDS 15.0%
!!! TATAATTGATTCATGTTTTT+AGG - chr1_1:62142629-62142648 Msa0034210:intron 15.0%
!!! ATAATTGATTCATGTTTTTA+GGG - chr1_1:62142630-62142649 Msa0034210:intron 15.0%
!! TTTATGCCAATATAATATTA+AGG - chr1_1:62144440-62144459 Msa0034210:intron 15.0%
!! AGTTAACCTTAATATTATAT+TGG + chr1_1:62144449-62144468 None:intergenic 15.0%
!!! ATTTTAATGTAACAACTAAA+AGG + chr1_1:62145196-62145215 None:intergenic 15.0%
!! TGACTTCTTTAATATTTATT+TGG - chr1_1:62145558-62145577 Msa0034210:intron 15.0%
!!! GATATCATTTTTTAAAATCA+GGG + chr1_1:62146444-62146463 None:intergenic 15.0%
!!! AGATATCATTTTTTAAAATC+AGG + chr1_1:62146445-62146464 None:intergenic 15.0%
!!! TATCTTATGGAAATTTTATT+TGG - chr1_1:62146460-62146479 Msa0034210:CDS 15.0%
!! TATTTCTTATTGATATCTTA+TGG - chr1_1:62146504-62146523 Msa0034210:CDS 15.0%
!!! ATTTTCATGTGAAATGTAAA+AGG - chr1_1:62142022-62142041 Msa0034210:intron 20.0%
!! TTTGAGTATAAAATGTATCA+TGG - chr1_1:62142518-62142537 Msa0034210:CDS 20.0%
!! ATTATCTGATGTTGTATTAT+TGG + chr1_1:62142556-62142575 None:intergenic 20.0%
!! ATAATACAACATCAGATAAT+TGG - chr1_1:62142556-62142575 Msa0034210:CDS 20.0%
!! TAATACAACATCAGATAATT+GGG - chr1_1:62142557-62142576 Msa0034210:CDS 20.0%
!! GGTTTAAGAGTTTAATTAAA+CGG + chr1_1:62143156-62143175 None:intergenic 20.0%
!! ATTATTGTGCATCTAAAAAT+TGG - chr1_1:62143233-62143252 Msa0034210:intron 20.0%
!! AAATAACACTTAATAGCTAA+TGG + chr1_1:62143595-62143614 None:intergenic 20.0%
!! CTAAGAATTGAGTAAAATAA+TGG + chr1_1:62143622-62143641 None:intergenic 20.0%
!!! CATTATTTTACTCAATTCTT+AGG - chr1_1:62143620-62143639 Msa0034210:intron 20.0%
!!! TTTCTATTCGTGATTTTTTA+AGG - chr1_1:62144415-62144434 Msa0034210:CDS 20.0%
!! AATTGTCATCAAAATATTCA+AGG + chr1_1:62144963-62144982 None:intergenic 20.0%
!!! TGATATTTGTTTCTAAATAC+TGG - chr1_1:62145243-62145262 Msa0034210:CDS 20.0%
!!! AATTTAGAACATTCTATATC+TGG - chr1_1:62146248-62146267 Msa0034210:intron 20.0%
!!! ATCTTATGGATATTTTAAAC+TGG - chr1_1:62146518-62146537 Msa0034210:intron 20.0%
!!! TTCTTGTTAAGCATTTTAAA+AGG - chr1_1:62147436-62147455 Msa0034210:intron 20.0%
!!! TCTTGTTAAGCATTTTAAAA+GGG - chr1_1:62147437-62147456 Msa0034210:intron 20.0%
!! AGGAACAAACAAATAATAAA+AGG + chr1_1:62147475-62147494 None:intergenic 20.0%
!!! AACCATATATATTTTTTTGC+TGG - chr1_1:62147542-62147561 Msa0034210:intron 20.0%
!!! ACCATATATATTTTTTTGCT+GGG - chr1_1:62147543-62147562 Msa0034210:intron 20.0%
! AAGCAGATACAAAAAGAAAA+AGG - chr1_1:62141546-62141565 Msa0034210:three_prime_UTR 25.0%
! ATACAAAAAGAAAAAGGAAG+AGG - chr1_1:62141552-62141571 Msa0034210:three_prime_UTR 25.0%
! ATGTTATGTTATGTTACCTT+TGG + chr1_1:62141606-62141625 None:intergenic 25.0%
!! CTTTCTCTTTATTTCTTCTT+TGG - chr1_1:62141752-62141771 Msa0034210:exon 25.0%
! TAAACTTTGTCTTTAGTTGA+AGG - chr1_1:62141795-62141814 Msa0034210:CDS 25.0%
! AGGATTAAGAAGAATTTAAG+AGG - chr1_1:62141815-62141834 Msa0034210:CDS 25.0%
!!! GTTACATTGTTGTTTTGTTT+TGG - chr1_1:62141837-62141856 Msa0034210:CDS 25.0%
!!! TTTTGGTTAGTTGTTTGTTA+TGG - chr1_1:62141854-62141873 Msa0034210:CDS 25.0%
!! TATCATTTTCTCTCTGATAT+TGG - chr1_1:62141990-62142009 Msa0034210:intron 25.0%
! TCTTTGTAATGTTCTTAACA+AGG - chr1_1:62142204-62142223 Msa0034210:CDS 25.0%
! AGTAAATCAAATCAAGACTA+TGG + chr1_1:62142257-62142276 None:intergenic 25.0%
! AAATACTGAAAAGCAGATAA+TGG + chr1_1:62142383-62142402 None:intergenic 25.0%
! TGAAAATGTTAGAAACTTTC+TGG - chr1_1:62142403-62142422 Msa0034210:CDS 25.0%
!!! AGTTCAATAAATGTTGACTT+TGG - chr1_1:62142596-62142615 Msa0034210:CDS 25.0%
! ATCAAATACAAAACCCTATT+TGG - chr1_1:62143125-62143144 Msa0034210:CDS 25.0%
! TTAAACGGTTTATCCAAATA+GGG + chr1_1:62143141-62143160 None:intergenic 25.0%
! ATTAAACGGTTTATCCAAAT+AGG + chr1_1:62143142-62143161 None:intergenic 25.0%
!! GTATCTAAAACAGTCATTAA+GGG - chr1_1:62143260-62143279 Msa0034210:intron 25.0%
!! TATCTAAAACAGTCATTAAG+GGG - chr1_1:62143261-62143280 Msa0034210:intron 25.0%
! AATAACCAATTCTGCATTTA+GGG + chr1_1:62143343-62143362 None:intergenic 25.0%
!! CTTTAAGAAAGTAATCTCAA+AGG + chr1_1:62143449-62143468 None:intergenic 25.0%
!! AGCAAAGTATTTACCTAAAT+TGG + chr1_1:62144167-62144186 None:intergenic 25.0%
! GTGAAAACTAAAATATGATG+AGG + chr1_1:62144253-62144272 None:intergenic 25.0%
!! AAGGTTAACTTTGTTTAATC+AGG - chr1_1:62144459-62144478 Msa0034210:intron 25.0%
!!! TTGTTTAATCAGGAAGTATT+AGG - chr1_1:62144469-62144488 Msa0034210:intron 25.0%
!!! TGTTTAATCAGGAAGTATTA+GGG - chr1_1:62144470-62144489 Msa0034210:intron 25.0%
! CTAAAATATAGTAATCTTGC+AGG + chr1_1:62144685-62144704 None:intergenic 25.0%
!!! ATTTTTTGTCTATTGTGTTC+AGG - chr1_1:62144716-62144735 Msa0034210:intron 25.0%
!!! TTTTTTGTCTATTGTGTTCA+GGG - chr1_1:62144717-62144736 Msa0034210:intron 25.0%
! AATGTTTGCATATTTGCTTA+CGG - chr1_1:62144791-62144810 Msa0034210:CDS 25.0%
!! AATTTTGTTGAAATGCAGAA+CGG - chr1_1:62144896-62144915 Msa0034210:intron 25.0%
! TCTAATGTATGAATGGTTAA+GGG + chr1_1:62145309-62145328 None:intergenic 25.0%
! TTCTAATGTATGAATGGTTA+AGG + chr1_1:62145310-62145329 None:intergenic 25.0%
! ACGAATTTCTAATGTATGAA+TGG + chr1_1:62145316-62145335 None:intergenic 25.0%
! TGTTATTGAACTAATGAACT+TGG - chr1_1:62145401-62145420 Msa0034210:intron 25.0%
! GTTATTGAACTAATGAACTT+GGG - chr1_1:62145402-62145421 Msa0034210:intron 25.0%
! TGATAGAATTGTATAACTGA+GGG + chr1_1:62145892-62145911 None:intergenic 25.0%
! ATGATAGAATTGTATAACTG+AGG + chr1_1:62145893-62145912 None:intergenic 25.0%
!!! TGTTTTTCATTATGTTGCTT+GGG - chr1_1:62145918-62145937 Msa0034210:intron 25.0%
! TAAGACTATTATGAAGAACT+AGG + chr1_1:62146140-62146159 None:intergenic 25.0%
! AGATATCAATAAGAAATAGC+CGG + chr1_1:62146502-62146521 None:intergenic 25.0%
! ACCCAGCAAAAAAATATATA+TGG + chr1_1:62147547-62147566 None:intergenic 25.0%
! TGTTGTATTTACACAGATAA+TGG - chr1_1:62147592-62147611 Msa0034210:five_prime_UTR 25.0%
! TATTTAACATTAGAGCTTTC+AGG - chr1_1:62147657-62147676 Msa0034210:five_prime_UTR 25.0%
TCTCTCTATGATCTTATAGT+TGG + chr1_1:62141683-62141702 None:intergenic 30.0%
TCGTCTTAAAGATCTTGATT+TGG - chr1_1:62141935-62141954 Msa0034210:intron 30.0%
!!! CTGTATTTTCTTTAAGGTTG+TGG - chr1_1:62142319-62142338 Msa0034210:CDS 30.0%
AAATGTTAGAAACTTTCTGG+TGG - chr1_1:62142406-62142425 Msa0034210:CDS 30.0%
! GATCTAGAACAAGTATGTAA+AGG - chr1_1:62142467-62142486 Msa0034210:CDS 30.0%
!!! ATTGATTCATGTTTTTAGGG+AGG - chr1_1:62142633-62142652 Msa0034210:intron 30.0%
CCATTCACTATAGGATTTAA+GGG + chr1_1:62142691-62142710 None:intergenic 30.0%
TCCATTCACTATAGGATTTA+AGG + chr1_1:62142692-62142711 None:intergenic 30.0%
! AGTTTGTTTCCATTCACTAT+AGG + chr1_1:62142700-62142719 None:intergenic 30.0%
TATAGTGAATGGAAACAAAC+TGG - chr1_1:62142699-62142718 Msa0034210:intron 30.0%
ATAGTGAATGGAAACAAACT+GGG - chr1_1:62142700-62142719 Msa0034210:intron 30.0%
CTTGACAAAGAATTGGTAAA+TGG + chr1_1:62142804-62142823 None:intergenic 30.0%
CATTTACCAATTCTTTGTCA+AGG - chr1_1:62142802-62142821 Msa0034210:CDS 30.0%
! AGATTTTTCATTGATGGAAG+AGG + chr1_1:62142829-62142848 None:intergenic 30.0%
! AGTCACAGATTTTTCATTGA+TGG + chr1_1:62142835-62142854 None:intergenic 30.0%
TGATGTCGAGTCTAATAAAA+TGG - chr1_1:62142866-62142885 Msa0034210:CDS 30.0%
! TATGTGCTATGATTTTGTCT+AGG - chr1_1:62142916-62142935 Msa0034210:CDS 30.0%
AGCTTATACATAAGCACTTA+TGG + chr1_1:62143177-62143196 None:intergenic 30.0%
! GGTATCTAAAACAGTCATTA+AGG - chr1_1:62143259-62143278 Msa0034210:intron 30.0%
CAATAACCAATTCTGCATTT+AGG + chr1_1:62143344-62143363 None:intergenic 30.0%
AGTAATATTGTTCTTCTGCA+TGG - chr1_1:62143467-62143486 Msa0034210:CDS 30.0%
TAGCTAATGGCATTACTTAA+AGG + chr1_1:62143582-62143601 None:intergenic 30.0%
!!! AGCTGTAGCAAAGTTTTTTA+TGG - chr1_1:62143743-62143762 Msa0034210:CDS 30.0%
!!! GTTTTTTATGGCACGTAAAA+AGG - chr1_1:62143755-62143774 Msa0034210:CDS 30.0%
AATGCTTGATTCTTATACTG+TGG - chr1_1:62143831-62143850 Msa0034210:CDS 30.0%
TTGTTATCCACCTAATCAAT+CGG + chr1_1:62143860-62143879 None:intergenic 30.0%
TCCTACAAAAAACACAAAGA+TGG + chr1_1:62144073-62144092 None:intergenic 30.0%
! TAGTTTTCACCTCTCTTTAT+AGG - chr1_1:62144263-62144282 Msa0034210:intron 30.0%
CTTAAGGGTAATAAGATTAC+TGG - chr1_1:62144374-62144393 Msa0034210:CDS 30.0%
ATTAATGTTCCCTCAAAGAA+TGG - chr1_1:62144576-62144595 Msa0034210:CDS 30.0%
TTAATGTTCCCTCAAAGAAT+GGG - chr1_1:62144577-62144596 Msa0034210:CDS 30.0%
AAAGACTTTGTTGAAGTTGA+AGG + chr1_1:62144616-62144635 None:intergenic 30.0%
TTCAACTTCAACAAAGTCTT+TGG - chr1_1:62144615-62144634 Msa0034210:CDS 30.0%
! TTTTTGTCTATTGTGTTCAG+GGG - chr1_1:62144718-62144737 Msa0034210:intron 30.0%
! AGAACGGACTTAAAAAACAA+TGG - chr1_1:62144912-62144931 Msa0034210:intron 30.0%
! TTCGTATTTGAAATGTAGAC+TGG - chr1_1:62144992-62145011 Msa0034210:intron 30.0%
!!! CTTTTTTCTGTGATCTCTTT+TGG + chr1_1:62145019-62145038 None:intergenic 30.0%
TTATACAGCGAATCAAAGAA+AGG - chr1_1:62145075-62145094 Msa0034210:CDS 30.0%
ACAATGAAAACAGCCTTTAT+TGG - chr1_1:62145274-62145293 Msa0034210:CDS 30.0%
!! TTGTTGATGATACTTGAACA+AGG + chr1_1:62145377-62145396 None:intergenic 30.0%
TGGATAACAGGACAATAAAT+AGG + chr1_1:62145496-62145515 None:intergenic 30.0%
AAATGTCACAAAAACAGTTG+TGG + chr1_1:62145516-62145535 None:intergenic 30.0%
TAACAAATCTCTTTCAGCTT+TGG - chr1_1:62145728-62145747 Msa0034210:intron 30.0%
AACAAATCTCTTTCAGCTTT+GGG - chr1_1:62145729-62145748 Msa0034210:intron 30.0%
!! TGAGTTTGCTATTTCTGTAA+GGG + chr1_1:62145794-62145813 None:intergenic 30.0%
AAAACTTACCAAGTGAATCT+TGG + chr1_1:62145827-62145846 None:intergenic 30.0%
!!! TCACTTGGTAAGTTTTAAGT+TGG - chr1_1:62145831-62145850 Msa0034210:intron 30.0%
! GTGTTTTTCATTATGTTGCT+TGG - chr1_1:62145917-62145936 Msa0034210:intron 30.0%
!! TTTTATTTGGATGATCCCTT+TGG - chr1_1:62146473-62146492 Msa0034210:CDS 30.0%
TTTGAACAAGACTATTCACT+GGG + chr1_1:62146632-62146651 None:intergenic 30.0%
! TTTTGAACAAGACTATTCAC+TGG + chr1_1:62146633-62146652 None:intergenic 30.0%
!! TAGTCTTGTTCAAAATTGTG+TGG - chr1_1:62146638-62146657 Msa0034210:intron 30.0%
TCCTATAATATGTTCATGAG+AGG - chr1_1:62146834-62146853 Msa0034210:intron 30.0%
ATGTTCAAAATTGTATGCAC+AGG + chr1_1:62147237-62147256 None:intergenic 30.0%
TTGACATGAAACGTAAAACT+GGG - chr1_1:62147392-62147411 Msa0034210:intron 30.0%
CTCGAACTAAAAAATTGTGA+AGG + chr1_1:62147495-62147514 None:intergenic 30.0%
!!! CTTCACAATTTTTTAGTTCG+AGG - chr1_1:62147493-62147512 Msa0034210:intron 30.0%
! GATGATGTTTGGAACATAGT+GGG - chr1_1:62141440-62141459 Msa0034210:three_prime_UTR 35.0%
! ATGATGTTTGGAACATAGTG+GGG - chr1_1:62141441-62141460 Msa0034210:three_prime_UTR 35.0%
! ACTATCTCTCTTTGTTGCTT+CGG + chr1_1:62141504-62141523 None:intergenic 35.0%
AAGCAACAAAGAGAGATAGT+GGG - chr1_1:62141504-62141523 Msa0034210:three_prime_UTR 35.0%
TCTAGAAAATCAGAAGAAGC+TGG - chr1_1:62141960-62141979 Msa0034210:intron 35.0%
TTAAGAAGATATGAAGCAGC+AGG - chr1_1:62142085-62142104 Msa0034210:intron 35.0%
TAAGAAGATATGAAGCAGCA+GGG - chr1_1:62142086-62142105 Msa0034210:intron 35.0%
TGTTCTTAACAAGGTTCATC+CGG - chr1_1:62142213-62142232 Msa0034210:CDS 35.0%
AATTGGAATTCCTACCTTTG+AGG - chr1_1:62142439-62142458 Msa0034210:CDS 35.0%
TTTAGGGAGGAAAATCATCA+AGG - chr1_1:62142646-62142665 Msa0034210:intron 35.0%
AAGGATTGTGAGTAGTGTAT+TGG - chr1_1:62142665-62142684 Msa0034210:intron 35.0%
CCCTTAAATCCTATAGTGAA+TGG - chr1_1:62142688-62142707 Msa0034210:intron 35.0%
TAGTGAATGGAAACAAACTG+GGG - chr1_1:62142701-62142720 Msa0034210:intron 35.0%
GCTAATGGTGTATGGAAATT+TGG - chr1_1:62142723-62142742 Msa0034210:intron 35.0%
AATGGTGTATGGAAATTTGG+TGG - chr1_1:62142726-62142745 Msa0034210:intron 35.0%
! AAAGATTTTGCAGTGATTGC+TGG + chr1_1:62142762-62142781 None:intergenic 35.0%
CAAAGAATTGGTAAATGGCT+CGG + chr1_1:62142799-62142818 None:intergenic 35.0%
TTTATTAGACTCGACATCAG+AGG + chr1_1:62142865-62142884 None:intergenic 35.0%
GTCGAGTCTAATAAAATGGT+TGG - chr1_1:62142870-62142889 Msa0034210:CDS 35.0%
! ATGATTTTGTCTAGGTGAGA+AGG - chr1_1:62142924-62142943 Msa0034210:CDS 35.0%
!! CAGTCTAGTTCTCATTCTTT+GGG - chr1_1:62142983-62143002 Msa0034210:intron 35.0%
! TGTTCTTTTGTGTCTCACAT+AGG - chr1_1:62143076-62143095 Msa0034210:CDS 35.0%
TGTGCATCTAAAAATTGGAC+AGG - chr1_1:62143238-62143257 Msa0034210:intron 35.0%
!!! TCTCTTCCTTTTAGTTTCTG+TGG - chr1_1:62143284-62143303 Msa0034210:intron 35.0%
AAATGGCCACAGAAACTAAA+AGG + chr1_1:62143293-62143312 None:intergenic 35.0%
! ACAGTTGGTTGAATCTGTTT+TGG - chr1_1:62143491-62143510 Msa0034210:CDS 35.0%
AGTATCATACCAGTTCATCT+TGG + chr1_1:62143554-62143573 None:intergenic 35.0%
AGTGAAATGTCTCAAAGAGA+TGG - chr1_1:62143720-62143739 Msa0034210:CDS 35.0%
TCCTATGGTAACAAAGAAAG+AGG - chr1_1:62143883-62143902 Msa0034210:intron 35.0%
TCCTCTTTCTTTGTTACCAT+AGG + chr1_1:62143887-62143906 None:intergenic 35.0%
AGCAAATGCTCTTTGATCAA+CGG - chr1_1:62143963-62143982 Msa0034210:intron 35.0%
!!! GCCATCTTTGTGTTTTTTGT+AGG - chr1_1:62144069-62144088 Msa0034210:CDS 35.0%
CATGCAAATGAAATTTCACG+AGG - chr1_1:62144135-62144154 Msa0034210:CDS 35.0%
TTTATAGGCATGCACATTCA+CGG - chr1_1:62144278-62144297 Msa0034210:intron 35.0%
CAAACTATACAATGAAGTCC+AGG - chr1_1:62144349-62144368 Msa0034210:CDS 35.0%
AATGAAGTCCAGGATCTTAA+GGG - chr1_1:62144359-62144378 Msa0034210:CDS 35.0%
TCTTATTACCCTTAAGATCC+TGG + chr1_1:62144370-62144389 None:intergenic 35.0%
AGGGTAATAAGATTACTGGT+TGG - chr1_1:62144378-62144397 Msa0034210:CDS 35.0%
! TAATAAGATTACTGGTTGGC+TGG - chr1_1:62144382-62144401 Msa0034210:CDS 35.0%
TTTGGTTGTCCAGATAAGAA+AGG + chr1_1:62144513-62144532 None:intergenic 35.0%
CAGGTAAGAGATAACTGAAA+AGG + chr1_1:62144666-62144685 None:intergenic 35.0%
! AAGTTTTTCCTGATCCTGTT+TGG + chr1_1:62144817-62144836 None:intergenic 35.0%
ATCAGGAAAAACTTTCACCA+TGG - chr1_1:62144823-62144842 Msa0034210:CDS 35.0%
ACTTCAACTGTATCTTACCA+TGG + chr1_1:62144843-62144862 None:intergenic 35.0%
AAAGCCAAGGTGTAAATTAC+AGG - chr1_1:62145035-62145054 Msa0034210:CDS 35.0%
AAGCCAAGGTGTAAATTACA+GGG - chr1_1:62145036-62145055 Msa0034210:CDS 35.0%
! AGAGATCTATTGGTTACTGA+TGG - chr1_1:62145154-62145173 Msa0034210:intron 35.0%
ATGAAAACAGCCTTTATTGG+TGG - chr1_1:62145277-62145296 Msa0034210:CDS 35.0%
ATTCGTAGTAACTCTCAAAG+AGG - chr1_1:62145330-62145349 Msa0034210:intron 35.0%
TTCGTAGTAACTCTCAAAGA+GGG - chr1_1:62145331-62145350 Msa0034210:intron 35.0%
CAAAAACAGTTGTGGATAAC+AGG + chr1_1:62145508-62145527 None:intergenic 35.0%
!!! ATGTTGGTTTTTCTGAGCAA+GGG + chr1_1:62145769-62145788 None:intergenic 35.0%
! TATTTCTGTAAGGGACATGT+TGG + chr1_1:62145785-62145804 None:intergenic 35.0%
!! GTGAGTTTGCTATTTCTGTA+AGG + chr1_1:62145795-62145814 None:intergenic 35.0%
CAATTACTCCAAGATTCACT+TGG - chr1_1:62145816-62145835 Msa0034210:intron 35.0%
GTGAACAAACATTAGTGTCT+TGG + chr1_1:62145963-62145982 None:intergenic 35.0%
! AATTGTTTCTCCAACAGCAT+TGG + chr1_1:62145999-62146018 None:intergenic 35.0%
GACTATTATGAAGAACTAGG+AGG + chr1_1:62146137-62146156 None:intergenic 35.0%
TAAACTTAACTGACGCAGTA+AGG + chr1_1:62146168-62146187 None:intergenic 35.0%
TTGAGTTCTTTGTCTCGATA+TGG + chr1_1:62146565-62146584 None:intergenic 35.0%
TTGAACAAGACTATTCACTG+GGG + chr1_1:62146631-62146650 None:intergenic 35.0%
AAATTGTGTGGAAGACGATA+AGG - chr1_1:62146650-62146669 Msa0034210:intron 35.0%
AAGTTAGATGTGAACAAGAC+TGG - chr1_1:62146714-62146733 Msa0034210:CDS 35.0%
AACAAGACTGGTAACATGTT+AGG - chr1_1:62146726-62146745 Msa0034210:CDS 35.0%
ACAAGACTGGTAACATGTTA+GGG - chr1_1:62146727-62146746 Msa0034210:CDS 35.0%
!! AGATAATGGGAACTTATCTG+AGG - chr1_1:62146761-62146780 Msa0034210:CDS 35.0%
GCCTCTCATGAACATATTAT+AGG + chr1_1:62146838-62146857 None:intergenic 35.0%
TCTTCTTTAGTAATGCTCGT+AGG - chr1_1:62147052-62147071 Msa0034210:CDS 35.0%
CTTCTTTAGTAATGCTCGTA+GGG - chr1_1:62147053-62147072 Msa0034210:CDS 35.0%
CCATTTGTTTGTTTCCTTGA+AGG + chr1_1:62147334-62147353 None:intergenic 35.0%
CCTTCAAGGAAACAAACAAA+TGG - chr1_1:62147331-62147350 Msa0034210:intron 35.0%
! GTTTTACGTTTCATGTCAAC+TGG + chr1_1:62147391-62147410 None:intergenic 35.0%
GTTGACATGAAACGTAAAAC+TGG - chr1_1:62147391-62147410 Msa0034210:intron 35.0%
! GGATGATGTTTGGAACATAG+TGG - chr1_1:62141439-62141458 Msa0034210:three_prime_UTR 40.0%
GAAGCAACAAAGAGAGATAG+TGG - chr1_1:62141503-62141522 Msa0034210:three_prime_UTR 40.0%
! TTTAGGCTTGGTTTGAGAAG+TGG - chr1_1:62142175-62142194 Msa0034210:CDS 40.0%
! TTAGGCTTGGTTTGAGAAGT+GGG - chr1_1:62142176-62142195 Msa0034210:CDS 40.0%
GTTCTTAACAAGGTTCATCC+GGG - chr1_1:62142214-62142233 Msa0034210:CDS 40.0%
AATCAAGACTATGGTCACCT+TGG + chr1_1:62142248-62142267 None:intergenic 40.0%
AGGTAGGAATTCCAATTTCC+TGG + chr1_1:62142436-62142455 None:intergenic 40.0%
TTCTAGATCAGATGCCTCAA+AGG + chr1_1:62142456-62142475 None:intergenic 40.0%
AGAGGTCCTTGACAAAGAAT+TGG + chr1_1:62142811-62142830 None:intergenic 40.0%
! ATTTTGTCTAGGTGAGAAGG+CGG - chr1_1:62142927-62142946 Msa0034210:CDS 40.0%
GAGAAGGCGGAATAACTAAA+TGG - chr1_1:62142940-62142959 Msa0034210:CDS 40.0%
!! GCAGTCTAGTTCTCATTCTT+TGG - chr1_1:62142982-62143001 Msa0034210:intron 40.0%
TTCCTACGGTAAGGACTAAA+TGG - chr1_1:62143050-62143069 Msa0034210:intron 40.0%
ATCCATTTAGTCCTTACCGT+AGG + chr1_1:62143055-62143074 None:intergenic 40.0%
AGCGTTTCAGGAAAACGAAA+TGG + chr1_1:62143310-62143329 None:intergenic 40.0%
CTAGTGCAGTACTACTAGAT+GGG + chr1_1:62143372-62143391 None:intergenic 40.0%
ACTAGTGCAGTACTACTAGA+TGG + chr1_1:62143373-62143392 None:intergenic 40.0%
CATTACAAGCCAAGATGAAC+TGG - chr1_1:62143542-62143561 Msa0034210:CDS 40.0%
ACTGTGGTTTCCGATTGATT+AGG - chr1_1:62143847-62143866 Msa0034210:intron 40.0%
GGTGGATAACAAGATTCCTA+TGG - chr1_1:62143868-62143887 Msa0034210:intron 40.0%
TAAAAACCATGTTGCTGACG+AGG - chr1_1:62143916-62143935 Msa0034210:intron 40.0%
GGCAGAGAGATATTCAAGTA+GGG - chr1_1:62143984-62144003 Msa0034210:intron 40.0%
ATGTGCATGCCTATAAAGAG+AGG + chr1_1:62144275-62144294 None:intergenic 40.0%
CAATGAAGTCCAGGATCTTA+AGG - chr1_1:62144358-62144377 Msa0034210:CDS 40.0%
CGAGTAAGACCTTTCTTATC+TGG - chr1_1:62144501-62144520 Msa0034210:intron 40.0%
ACCATCTTCTATGTTCTCCA+CGG + chr1_1:62144547-62144566 None:intergenic 40.0%
TTCCCTCAAAGAATGGGAAA+GGG - chr1_1:62144583-62144602 Msa0034210:CDS 40.0%
CTGAAAAGGAAACCAACCTT+GGG + chr1_1:62144652-62144671 None:intergenic 40.0%
ACTGAAAAGGAAACCAACCT+TGG + chr1_1:62144653-62144672 None:intergenic 40.0%
ATATTTGCTTACGGCCAAAC+AGG - chr1_1:62144800-62144819 Msa0034210:CDS 40.0%
GAGATCACAGAAAAAAGCCA+AGG - chr1_1:62145022-62145041 Msa0034210:CDS 40.0%
TGAGCAAGTCAGAGATCTAT+TGG - chr1_1:62145144-62145163 Msa0034210:intron 40.0%
AGGATATACACCTGTGAGAT+CGG + chr1_1:62145476-62145495 None:intergenic 40.0%
TGCTTGACTGTACATGTTCA+AGG - chr1_1:62145585-62145604 Msa0034210:intron 40.0%
!!! CATGTTGGTTTTTCTGAGCA+AGG + chr1_1:62145770-62145789 None:intergenic 40.0%
! ATGTTGCTTGGGATAACTTC+AGG - chr1_1:62145929-62145948 Msa0034210:intron 40.0%
AGAGTTGCTACAGTTGAACT+TGG - chr1_1:62146040-62146059 Msa0034210:intron 40.0%
CATTCTATATCTGGAAGCTC+TGG - chr1_1:62146257-62146276 Msa0034210:intron 40.0%
GATATCATGGATGATCCCTT+TGG - chr1_1:62146338-62146357 Msa0034210:CDS 40.0%
AAGTTGCCAACATCAATCAC+TGG + chr1_1:62146374-62146393 None:intergenic 40.0%
GATTGATGTTGGCAACTTAG+AGG - chr1_1:62146376-62146395 Msa0034210:CDS 40.0%
CATTAACAAATTCACCACCC+TGG - chr1_1:62146604-62146623 Msa0034210:intron 40.0%
TGAACAAGACTATTCACTGG+GGG + chr1_1:62146630-62146649 None:intergenic 40.0%
!! AGAGTGGGTTGATAAGGTTA+TGG - chr1_1:62146686-62146705 Msa0034210:intron 40.0%
! TGGTAACATGTTAGGGTGTT+GGG - chr1_1:62146734-62146753 Msa0034210:CDS 40.0%
! GGATCGTTCTGAGTATACTT+TGG + chr1_1:62146817-62146836 None:intergenic 40.0%
! CCAGTTTAACATTGCTGGTT+CGG - chr1_1:62146860-62146879 Msa0034210:intron 40.0%
GTCATGTTCTGATGAATCAC+TGG + chr1_1:62146913-62146932 None:intergenic 40.0%
!! CATCAGAACATGACTTGCTT+TGG - chr1_1:62146919-62146938 Msa0034210:intron 40.0%
AAAGTTACAAGCGTAGCCAA+CGG - chr1_1:62146957-62146976 Msa0034210:CDS 40.0%
! CAGCTAAAAGCACAGAATTG+AGG - chr1_1:62147015-62147034 Msa0034210:CDS 40.0%
GTTTGTTTCCTTGAAGGTGA+AGG + chr1_1:62147328-62147347 None:intergenic 40.0%
! GTTTGGAACATAGTGGGGTT+CGG - chr1_1:62141446-62141465 Msa0034210:three_prime_UTR 45.0%
!! CAACAAAGAGAGATAGTGGG+AGG - chr1_1:62141507-62141526 Msa0034210:three_prime_UTR 45.0%
GTGTACAGAGCAAAAGCCAA+AGG - chr1_1:62141587-62141606 Msa0034210:three_prime_UTR 45.0%
!!! GGCAGCATTGTCATTTTCAG+TGG - chr1_1:62141875-62141894 Msa0034210:intron 45.0%
TTCAGTGGCATCTGTTGTTG+AGG - chr1_1:62141890-62141909 Msa0034210:intron 45.0%
GAGGATGTTCTTCAACAGCA+TGG - chr1_1:62141909-62141928 Msa0034210:intron 45.0%
AGCAGGGTGGTTGAGAAAAA+TGG - chr1_1:62142102-62142121 Msa0034210:intron 45.0%
GGGTGGTTGAGAAAAATGGT+TGG - chr1_1:62142106-62142125 Msa0034210:intron 45.0%
! AGCCTTCTGAGGAAGAGTTT+AGG - chr1_1:62142158-62142177 Msa0034210:CDS 45.0%
AGCCTAAACTCTTCCTCAGA+AGG + chr1_1:62142163-62142182 None:intergenic 45.0%
TCTGAGGAAGAGTTTAGGCT+TGG - chr1_1:62142163-62142182 Msa0034210:CDS 45.0%
! GGGATTAGTGCAGAATCAAC+AGG + chr1_1:62142350-62142369 None:intergenic 45.0%
! AAACTTTCTGGTGGCTATCC+AGG - chr1_1:62142415-62142434 Msa0034210:CDS 45.0%
AGATCAGATGCCTCAAAGGT+AGG + chr1_1:62142452-62142471 None:intergenic 45.0%
TGGAAACAAACTGGGGCTAA+TGG - chr1_1:62142708-62142727 Msa0034210:intron 45.0%
AAACTGGGGCTAATGGTGTA+TGG - chr1_1:62142715-62142734 Msa0034210:intron 45.0%
GAAGCCAGAAGAAGTTCCTA+CGG - chr1_1:62143036-62143055 Msa0034210:intron 45.0%
CTTACCGTAGGAACTTCTTC+TGG + chr1_1:62143043-62143062 None:intergenic 45.0%
CAGAAGAAGTTCCTACGGTA+AGG - chr1_1:62143041-62143060 Msa0034210:intron 45.0%
ATGCGCCCTAAATGCAGAAT+TGG - chr1_1:62143335-62143354 Msa0034210:intron 45.0%
GTTCTTCTGCATGGAACAGT+TGG - chr1_1:62143476-62143495 Msa0034210:CDS 45.0%
!!! TGTTTTGGCGAAAGTCGTAG+AGG - chr1_1:62143506-62143525 Msa0034210:CDS 45.0%
GTGGTTTCCGATTGATTAGG+TGG - chr1_1:62143850-62143869 Msa0034210:intron 45.0%
CGGCAGAGAGATATTCAAGT+AGG - chr1_1:62143983-62144002 Msa0034210:intron 45.0%
ACAGTTCAAACCACCAAAGC+TGG - chr1_1:62144103-62144122 Msa0034210:CDS 45.0%
CATGAACTGCATACCAGCTT+TGG + chr1_1:62144119-62144138 None:intergenic 45.0%
CACGAGGAGTTCTCCAATTT+AGG - chr1_1:62144151-62144170 Msa0034210:CDS 45.0%
! ACCAAATCATTCGAGTACCG+TGG - chr1_1:62144527-62144546 Msa0034210:intron 45.0%
TCCACGGTACTCGAATGATT+TGG + chr1_1:62144531-62144550 None:intergenic 45.0%
ACCGTGGAGAACATAGAAGA+TGG - chr1_1:62144543-62144562 Msa0034210:CDS 45.0%
GTTCCCTCAAAGAATGGGAA+AGG - chr1_1:62144582-62144601 Msa0034210:CDS 45.0%
TTGTCTATTGTGTTCAGGGG+AGG - chr1_1:62144721-62144740 Msa0034210:intron 45.0%
CTGATATGCAGCCACTTGTT+AGG - chr1_1:62144750-62144769 Msa0034210:intron 45.0%
GAGCCCTGTAATTTACACCT+TGG + chr1_1:62145042-62145061 None:intergenic 45.0%
AGGGATAGCACCACCAATAA+AGG + chr1_1:62145290-62145309 None:intergenic 45.0%
ACTTGAACAAGGCTTGCATC+TGG + chr1_1:62145366-62145385 None:intergenic 45.0%
CAAGGAAGAGACTTGACATC+TGG - chr1_1:62145603-62145622 Msa0034210:intron 45.0%
! TGACATCTGGAGCTGTCTTA+CGG - chr1_1:62145616-62145635 Msa0034210:intron 45.0%
! ATGCATGCATCTCGTTGACT+TGG - chr1_1:62145641-62145660 Msa0034210:CDS 45.0%
TTGCTTGGGATAACTTCAGG+AGG - chr1_1:62145932-62145951 Msa0034210:intron 45.0%
GTTTGTTCACATTAGTCCCG+AGG - chr1_1:62145973-62145992 Msa0034210:intron 45.0%
CGTCAAAGAGCTCAAAGAAC+AGG - chr1_1:62146093-62146112 Msa0034210:intron 45.0%
! TAAGGCTGGCAATCTGAAAC+AGG + chr1_1:62146202-62146221 None:intergenic 45.0%
GTTTCAGATTGCCAGCCTTA+AGG - chr1_1:62146202-62146221 Msa0034210:intron 45.0%
TTCTTGCCAATGCTGCCTTA+AGG + chr1_1:62146220-62146239 None:intergenic 45.0%
!! TAAGGCAGCATTGGCAAGAA+AGG - chr1_1:62146220-62146239 Msa0034210:intron 45.0%
!! CTGGAAGCTCTGGAAAATGT+AGG - chr1_1:62146267-62146286 Msa0034210:intron 45.0%
! CTCTGGAAAATGTAGGACAG+CGG - chr1_1:62146274-62146293 Msa0034210:intron 45.0%
! CAACATCAATCACTGGTTGC+CGG + chr1_1:62146367-62146386 None:intergenic 45.0%
AGAAATAGCCGGCATCCAAA+GGG + chr1_1:62146491-62146510 None:intergenic 45.0%
AAGAAATAGCCGGCATCCAA+AGG + chr1_1:62146492-62146511 None:intergenic 45.0%
GTGGAAGACGATAAGGAAAC+CGG - chr1_1:62146657-62146676 Msa0034210:intron 45.0%
!! TACAGGAGAGTGGGTTGATA+AGG - chr1_1:62146680-62146699 Msa0034210:intron 45.0%
CTGGTAACATGTTAGGGTGT+TGG - chr1_1:62146733-62146752 Msa0034210:CDS 45.0%
! GGTGTTGGGAAGCAGATAAT+GGG - chr1_1:62146748-62146767 Msa0034210:CDS 45.0%
GGCAACCAGTTTAACATTGC+TGG - chr1_1:62146855-62146874 Msa0034210:intron 45.0%
CCGAACCAGCAATGTTAAAC+TGG + chr1_1:62146863-62146882 None:intergenic 45.0%
GGTAGCAGCATCAACATCAT+CGG + chr1_1:62146892-62146911 None:intergenic 45.0%
AGCCAACGGACATGAATCAA+AGG - chr1_1:62146971-62146990 Msa0034210:CDS 45.0%
GCCAACGGACATGAATCAAA+GGG - chr1_1:62146972-62146991 Msa0034210:CDS 45.0%
ACCCTTTGATTCATGTCCGT+TGG + chr1_1:62146976-62146995 None:intergenic 45.0%
ACGGACATGAATCAAAGGGT+AGG - chr1_1:62146976-62146995 Msa0034210:CDS 45.0%
TAATGCCCGTTGCTTGTACA+TGG - chr1_1:62147620-62147639 Msa0034210:five_prime_UTR 45.0%
TCATGCCATGTACAAGCAAC+GGG + chr1_1:62147628-62147647 None:intergenic 45.0%
GTCATGCCATGTACAAGCAA+CGG + chr1_1:62147629-62147648 None:intergenic 45.0%
CAACTCCTTCCCACATGCTT+CGG + chr1_1:62141474-62141493 None:intergenic 50.0%
!! AAGAGAGATAGTGGGAGGAG+AGG - chr1_1:62141512-62141531 Msa0034210:three_prime_UTR 50.0%
GAAGATATGAAGCAGCAGGG+TGG - chr1_1:62142089-62142108 Msa0034210:intron 50.0%
TTTACCAGCAGAGCCTTCTG+AGG - chr1_1:62142147-62142166 Msa0034210:intron 50.0%
TCATCCGGGTTCTGTATCCA+AGG - chr1_1:62142228-62142247 Msa0034210:CDS 50.0%
GTCACCTTGGATACAGAACC+CGG + chr1_1:62142235-62142254 None:intergenic 50.0%
GATTCTGCACTAATCCCCGA+TGG - chr1_1:62142353-62142372 Msa0034210:CDS 50.0%
! AGCAGATAATGGCGCTCCAT+CGG + chr1_1:62142372-62142391 None:intergenic 50.0%
CTGGTGGCTATCCAGGAAAT+TGG - chr1_1:62142422-62142441 Msa0034210:CDS 50.0%
!! GGCGCATTTTTCAGCGTTTC+AGG + chr1_1:62143322-62143341 None:intergenic 50.0%
! GAACTGCATACCAGCTTTGG+TGG + chr1_1:62144116-62144135 None:intergenic 50.0%
CGCCCTTTCCCATTCTTTGA+GGG + chr1_1:62144588-62144607 None:intergenic 50.0%
TCGAGCACAGACCTAACAAG+TGG + chr1_1:62144764-62144783 None:intergenic 50.0%
CTTGTTAGGTCTGTGCTCGA+TGG - chr1_1:62144764-62144783 Msa0034210:intron 50.0%
TCGGCTGCTACGGTCATTAA+GGG + chr1_1:62145457-62145476 None:intergenic 50.0%
ATCGGCTGCTACGGTCATTA+AGG + chr1_1:62145458-62145477 None:intergenic 50.0%
! GACATCTGGAGCTGTCTTAC+GGG - chr1_1:62145617-62145636 Msa0034210:intron 50.0%
! ACATCTGGAGCTGTCTTACG+GGG - chr1_1:62145618-62145637 Msa0034210:intron 50.0%
!! ATGCATCTCGTTGACTTGGC+AGG - chr1_1:62145645-62145664 Msa0034210:CDS 50.0%
!! TTGACTTGGCAGGAAGTGAG+AGG - chr1_1:62145655-62145674 Msa0034210:CDS 50.0%
! TGACTTGGCAGGAAGTGAGA+GGG - chr1_1:62145656-62145675 Msa0034210:CDS 50.0%
TGAGAGGGTCGACAAATCTG+AGG - chr1_1:62145671-62145690 Msa0034210:CDS 50.0%
GACGGGCGATAGATTGAAAG+AGG - chr1_1:62145695-62145714 Msa0034210:intron 50.0%
TGGGATAACTTCAGGAGGAC+AGG - chr1_1:62145937-62145956 Msa0034210:intron 50.0%
!! TTCTCCAACAGCATTGGCCT+CGG + chr1_1:62145993-62146012 None:intergenic 50.0%
!! GCAGCATTGGCAAGAAAGGA+AGG - chr1_1:62146224-62146243 Msa0034210:intron 50.0%
CACCTTATCATGCAAGCCAG+CGG - chr1_1:62146309-62146328 Msa0034210:CDS 50.0%
ACCTTATCATGCAAGCCAGC+GGG - chr1_1:62146310-62146329 Msa0034210:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG - chr1_1:62146345-62146364 Msa0034210:CDS 50.0%
CGGCAACCAGTGATTGATGT+TGG - chr1_1:62146365-62146384 Msa0034210:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG - chr1_1:62146345-62146364 Msa0034210:CDS 50.0%
GACGATAAGGAAACCGGTAC+AGG - chr1_1:62146663-62146682 Msa0034210:intron 50.0%
ATCAACCCACTCTCCTGTAC+CGG + chr1_1:62146679-62146698 None:intergenic 50.0%
!! GGGTGTTGGGAAGCAGATAA+TGG - chr1_1:62146747-62146766 Msa0034210:CDS 50.0%
ATTGTATGCACAGGCAGCAC+TGG + chr1_1:62147228-62147247 None:intergenic 50.0%
CTACTGCTCCTTCACCTTCA+AGG - chr1_1:62147317-62147336 Msa0034210:intron 50.0%
TCGCACATCGAACACCAACA+AGG - chr1_1:62147356-62147375 Msa0034210:intron 50.0%
CGTTTCATGTCAACTGGAGC+TGG + chr1_1:62147385-62147404 None:intergenic 50.0%
GGTTCGGAACCGAAGCATGT+GGG - chr1_1:62141462-62141481 Msa0034210:three_prime_UTR 55.0%
CGAAGCATGTGGGAAGGAGT+TGG - chr1_1:62141472-62141491 Msa0034210:three_prime_UTR 55.0%
TCTTCCTCAGAAGGCTCTGC+TGG + chr1_1:62142154-62142173 None:intergenic 55.0%
! CAGATAATGGCGCTCCATCG+GGG + chr1_1:62142370-62142389 None:intergenic 55.0%
! GCAGATAATGGCGCTCCATC+GGG + chr1_1:62142371-62142390 None:intergenic 55.0%
GTGACTCCTCGTCAGCAACA+TGG + chr1_1:62143925-62143944 None:intergenic 55.0%
TTGCTGACGAGGAGTCACAG+AGG - chr1_1:62143927-62143946 Msa0034210:intron 55.0%
! GGCTTAGCTCATGCTGCTTC+TGG - chr1_1:62144299-62144318 Msa0034210:intron 55.0%
GCGCCCTTTCCCATTCTTTG+AGG + chr1_1:62144589-62144608 None:intergenic 55.0%
TTTGGACCATCTGCAGCCCA+AGG - chr1_1:62144633-62144652 Msa0034210:CDS 55.0%
AACCAACCTTGGGCTGCAGA+TGG + chr1_1:62144642-62144661 None:intergenic 55.0%
GCTTACGGCCAAACAGGATC+AGG - chr1_1:62144806-62144825 Msa0034210:CDS 55.0%
ACCTGTGAGATCGGCTGCTA+CGG + chr1_1:62145467-62145486 None:intergenic 55.0%
! GGTCGACAAATCTGAGGCGA+CGG - chr1_1:62145677-62145696 Msa0034210:intron 55.0%
! GTCGACAAATCTGAGGCGAC+GGG - chr1_1:62145678-62145697 Msa0034210:intron 55.0%
!! TCTCCAACAGCATTGGCCTC+GGG + chr1_1:62145992-62146011 None:intergenic 55.0%
CTGCCCGAGTCAACAAGGAT+GGG - chr1_1:62146065-62146084 Msa0034210:intron 55.0%
TGCCCGAGTCAACAAGGATG+GGG - chr1_1:62146066-62146085 Msa0034210:intron 55.0%
!! TGCCCCATCCTTGTTGACTC+GGG + chr1_1:62146071-62146090 None:intergenic 55.0%
! CTGCCCCATCCTTGTTGACT+CGG + chr1_1:62146072-62146091 None:intergenic 55.0%
TGCCAGCCTTAAGGCAGCAT+TGG - chr1_1:62146211-62146230 Msa0034210:intron 55.0%
TGCCAATGCTGCCTTAAGGC+TGG + chr1_1:62146216-62146235 None:intergenic 55.0%
GTAGGACAGCGGCTAGTGAA+CGG - chr1_1:62146285-62146304 Msa0034210:intron 55.0%
ACTGGTTGCCGGCATCCAAA+GGG + chr1_1:62146356-62146375 None:intergenic 55.0%
AGACTATTCACTGGGGGCCA+GGG + chr1_1:62146624-62146643 None:intergenic 55.0%
AAGACTATTCACTGGGGGCC+AGG + chr1_1:62146625-62146644 None:intergenic 55.0%
AGGAAACCGGTACAGGAGAG+TGG - chr1_1:62146670-62146689 Msa0034210:intron 55.0%
GGAAACCGGTACAGGAGAGT+GGG - chr1_1:62146671-62146690 Msa0034210:intron 55.0%
ACTGGAGCTGGTTGCCTTGT+TGG + chr1_1:62147373-62147392 None:intergenic 55.0%
GGGTTCGGAACCGAAGCATG+TGG - chr1_1:62141461-62141480 Msa0034210:three_prime_UTR 60.0%
CGGAACCGAAGCATGTGGGA+AGG - chr1_1:62141466-62141485 Msa0034210:three_prime_UTR 60.0%
GACCATCTGCAGCCCAAGGT+TGG - chr1_1:62144637-62144656 Msa0034210:CDS 60.0%
ACCGTAGCAGCCGATCTCAC+AGG - chr1_1:62145463-62145482 Msa0034210:CDS 60.0%
AGTCCCGAGGCCAATGCTGT+TGG - chr1_1:62145986-62146005 Msa0034210:intron 60.0%
!! TGGTGCTGCCCGAGTCAACA+AGG - chr1_1:62146060-62146079 Msa0034210:intron 60.0%
GCTGCCCGAGTCAACAAGGA+TGG - chr1_1:62146064-62146083 Msa0034210:intron 60.0%
!! GCCCGCTGGCTTGCATGATA+AGG + chr1_1:62146314-62146333 None:intergenic 60.0%
CCATGATATCTGCAGCCCGC+TGG + chr1_1:62146328-62146347 None:intergenic 60.0%
!! CCAGCGGGCTGCAGATATCA+TGG - chr1_1:62146325-62146344 Msa0034210:CDS 60.0%
! CACTGGTTGCCGGCATCCAA+AGG + chr1_1:62146357-62146376 None:intergenic 60.0%
GGGCTGTTGCTCCGACTGCA+CGG + chr1_1:62145437-62145456 None:intergenic 65.0%
CTATTCACTGGGGGCCAGGG+TGG + chr1_1:62146621-62146640 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 62141433 62147752 62141433 ID=Msa0034210;Name=Msa0034210
chr1_1 mRNA 62141433 62147752 62141433 ID=Msa0034210-mRNA-1;Parent=Msa0034210;Name=Msa0034210-mRNA-1;_AED=0.12;_eAED=0.12;_QI=185|0.89|0.85|1|0.94|0.9|20|326|1016
chr1_1 exon 62141433 62141888 62141433 ID=Msa0034210-mRNA-1:exon:19583;Parent=Msa0034210-mRNA-1
chr1_1 exon 62142149 62142636 62142149 ID=Msa0034210-mRNA-1:exon:19582;Parent=Msa0034210-mRNA-1
chr1_1 exon 62142788 62142976 62142788 ID=Msa0034210-mRNA-1:exon:19581;Parent=Msa0034210-mRNA-1
chr1_1 exon 62143071 62143234 62143071 ID=Msa0034210-mRNA-1:exon:19580;Parent=Msa0034210-mRNA-1
chr1_1 exon 62143348 62143601 62143348 ID=Msa0034210-mRNA-1:exon:19579;Parent=Msa0034210-mRNA-1
chr1_1 exon 62143701 62143857 62143701 ID=Msa0034210-mRNA-1:exon:19578;Parent=Msa0034210-mRNA-1
chr1_1 exon 62143986 62144175 62143986 ID=Msa0034210-mRNA-1:exon:19577;Parent=Msa0034210-mRNA-1
chr1_1 exon 62144341 62144447 62144341 ID=Msa0034210-mRNA-1:exon:19576;Parent=Msa0034210-mRNA-1
chr1_1 exon 62144531 62144704 62144531 ID=Msa0034210-mRNA-1:exon:19575;Parent=Msa0034210-mRNA-1
chr1_1 exon 62144790 62144900 62144790 ID=Msa0034210-mRNA-1:exon:19574;Parent=Msa0034210-mRNA-1
chr1_1 exon 62145013 62145094 62145013 ID=Msa0034210-mRNA-1:exon:19573;Parent=Msa0034210-mRNA-1
chr1_1 exon 62145185 62145316 62145185 ID=Msa0034210-mRNA-1:exon:19572;Parent=Msa0034210-mRNA-1
chr1_1 exon 62145409 62145483 62145409 ID=Msa0034210-mRNA-1:exon:19571;Parent=Msa0034210-mRNA-1
chr1_1 exon 62145622 62145690 62145622 ID=Msa0034210-mRNA-1:exon:19570;Parent=Msa0034210-mRNA-1
chr1_1 exon 62146128 62146199 62146128 ID=Msa0034210-mRNA-1:exon:19569;Parent=Msa0034210-mRNA-1
chr1_1 exon 62146298 62146534 62146298 ID=Msa0034210-mRNA-1:exon:19568;Parent=Msa0034210-mRNA-1
chr1_1 exon 62146707 62146850 62146707 ID=Msa0034210-mRNA-1:exon:19567;Parent=Msa0034210-mRNA-1
chr1_1 exon 62146936 62147102 62146936 ID=Msa0034210-mRNA-1:exon:19566;Parent=Msa0034210-mRNA-1
chr1_1 exon 62147204 62147321 62147204 ID=Msa0034210-mRNA-1:exon:19565;Parent=Msa0034210-mRNA-1
chr1_1 exon 62147577 62147752 62147577 ID=Msa0034210-mRNA-1:exon:19564;Parent=Msa0034210-mRNA-1
chr1_1 five_prime_UTR 62147577 62147752 62147577 ID=Msa0034210-mRNA-1:five_prime_utr;Parent=Msa0034210-mRNA-1
chr1_1 five_prime_UTR 62147313 62147321 62147313 ID=Msa0034210-mRNA-1:five_prime_utr;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62147204 62147312 62147204 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62146936 62147102 62146936 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62146707 62146850 62146707 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62146298 62146534 62146298 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62146128 62146199 62146128 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62145622 62145690 62145622 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62145409 62145483 62145409 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62145185 62145316 62145185 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62145013 62145094 62145013 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62144790 62144900 62144790 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62144531 62144704 62144531 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62144341 62144447 62144341 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62143986 62144175 62143986 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62143701 62143857 62143701 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62143348 62143601 62143348 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62143071 62143234 62143071 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62142788 62142976 62142788 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62142149 62142636 62142149 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 CDS 62141759 62141888 62141759 ID=Msa0034210-mRNA-1:cds;Parent=Msa0034210-mRNA-1
chr1_1 three_prime_UTR 62141433 62141758 62141433 ID=Msa0034210-mRNA-1:three_prime_utr;Parent=Msa0034210-mRNA-1
Gene Sequence

>Msa0034210

ATGGCAGCATTGTCATTTTCAGTGGCATCTGTTGTTGAGGATGTTCTTCAACAGCATGGTACTCGTCTTAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTAAGAAGATATGAAGCAGCAGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTTTGTAATGTTCTTAACAAGGTTCATCCGGGTTCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTAATCCCCGATGGAGCGCCATTATCTGCTTTTCAGTATTTTGAAAATGTTAGAAACTTTCTGGTGGCTATCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTAGAACAAGGAGGAAAATCATCAAGGATTGTGAGTAGTGTATTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTATGGAAATTTGGTGGAACTATCAAACCAGCAATCACTGCAAAATCTTTTGTGAGAAAAAACTCCGAGCCATTTACCAATTCTTTGTCAAGGACCTCTTCCATCAATGAAAAATCTGTGACTTCTTTTACCTCTGATGTCGAGTCTAATAAAATGTCTAGTTCTCATTCTTTGGGTATGCTTGTTCGTGCAATACTTTTCGATAAGAAGCCAGAAGAAGTTCCTACGTTGGTTGAATCTGTTTTGGCGAAAGTCGTAGAGGAGTTTGAGCATCGCATTACAAGCCAAGATGAACTGACAAAAACAACTTCAAGAAGTGAAATGTCTCAAAGAGATGGAGCTGTAGCAAAGTTTTTTATGGCACGTAAAAAGGTGGATAACAAGATTCCTATGGTAACAAAGAAAGAGGAATTCATCTATAAAAACCATGTTGCTGACGAGGAGTCACAGAGGCAACTTCAGAAGCAGCAAATGCTCTTTGATCAACGGCAGAGAGATATTCAAGAATTAAAGCATACAGTTCAAACCACCAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCACGAGGAGTTCTCCAATTTAGGCATGCACATTCACGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGTAATAAGATTACTGGAAGTATTAGGGTTTACTGTCGAGTAAGACCTTTCTTATCTGGACAACCAAATCATTCGAGTACCGTGGAGAACATAGAAGATGGTGTTATCACAATTAATGTTCCCTCAAAGAATGGGAAAGGGCGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAGCCCAAGGGGAGGTCTTCGCTGATATGCAGCCACTTGTTAGGTCTGTGCTCGATGGTTTTAATGTTTGCATATTTGCTTACGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATCTATTTTATACAGCGAATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAGATGATTGAAATATATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATATCCTTTTAAAATTCGTAGTAACTCTCAAAGAGGGCTAAGTGTACCAGATGCAAGCCTTGTTCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACTTGGGTCATAAGAACCGTGCAGTCGGAGCAACAGCCCTTAATGACCGTAGCAGCCGATCTCACAGTTGCTTGACTGTACATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCTTACGGGGATGCATGCATCTCGTTGACTTGGCAGGAAGTGAGAGGGTCGACAAATCTGAGGCGACGGGCGATAGATTGAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATTAGTCCCGAGGCCAATGCTGTTGGAGAAACAATTAGCACATTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCCCGAGTCAACAAGGATGGGGCAGACGTCAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAAATTTAGAACATTCTATATCTGGAAGCTCTGGAAAATGTAGGACAGCGGCTAGTGAACGGTCACCTTATCATGCAAGCCAGCGGGCTGCAGATATCATGGATGATCCCTTTGGATGCCGGCAACCAGTGATTGATGTTGGCAACTTAGAGCTTCAGAGCAATACCATATCGAGACAAAGAACTCAAAGCTTTGATTTTGATGAGACATTAACAAATTCACCACCCTGGCCCCCAGTGAATAGTCTTGTTCAAAATTGTGTGGAAGACGATAAGGAAACCGGTACAGGAGAGTGGGTTGATAAGGTTATGGTAAACAAGTTAGATGTGAACAAGACTGGTAACATGTTAGGGTGTTGGGAAGCAGATAATGGGAACTTATCTGAGGAATTTTATCAGAAATATCTTCAAGATTCTTCCAAAGTATACTCAGAACGATCCTATAATATGTTCATGAGAGGCAACCAGTTTAACATTGCTGGTTCGGATGACACCGATGATGTTGATGCTGCTACCAGTGATTCATCAGAACATGACTTGCTTTGGCAATTTAATCATTCAAAAGTTACAAGCGTAGCCAACGGACATGAATCAAAGGGTAGGAGATTTGTCTCAAAGTCAGCTAAAAGCACAGAATTGAGCAAGAATAGCATTCATTCTTCTACTGCTCCTTCACCTTCAAGGAAACAAACAAATGGTGTCGCACATCGAACACCAACAAGGCAACCAGCTCCAGTTGACATGAAACGTAAAACTGGGACTAGAAAGTGA
Protein sequence

>Msa0034210

MAALSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAALRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVHPGSVSKVVESPVDSALIPDGAPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKSSRIVSSVLALKSYSEWKQTGANGVWKFGGTIKPAITAKSFVRKNSEPFTNSLSRTSSINEKSVTSFTSDVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLAKVVEEFEHRITSQDELTKTTSRSEMSQRDGAVAKFFMARKKVDNKIPMVTKKEEFIYKNHVADEESQRQLQKQQMLFDQRQRDIQELKHTVQTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGNKITGSIRVYCRVRPFLSGQPNHSSTVENIEDGVITINVPSKNGKGRRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFKIRSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAVGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGNLEHSISGSSGKCRTAASERSPYHASQRAADIMDDPFGCRQPVIDVGNLELQSNTISRQRTQSFDFDETLTNSPPWPPVNSLVQNCVEDDKETGTGEWVDKVMVNKLDVNKTGNMLGCWEADNGNLSEEFYQKYLQDSSKVYSERSYNMFMRGNQFNIAGSDDTDDVDAATSDSSEHDLLWQFNHSKVTSVANGHESKGRRFVSKSAKSTELSKNSIHSSTAPSPSRKQTNGVAHRTPTRQPAPVDMKRKTGTRK*