Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617410 | XP_039685507.1 | 95.072 | 345 | 17 | 0 | 11 | 355 | 26 | 370 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617410 | sp|Q8VYP6|NOL9_ARATH | 53.868 | 349 | 146 | 7 | 13 | 355 | 29 | 368 | 5.78e-124 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617410 | A0A396GMT2 | 95.072 | 345 | 17 | 0 | 11 | 355 | 26 | 370 | 0.0 | 667 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048000 | Msa0617410 | -0.829117 | 6.159367e-55 | -8.615850e-47 |
| Msa0050730 | Msa0617410 | -0.815299 | 9.925793e-52 | -8.615850e-47 |
| Msa0050760 | Msa0617410 | -0.826432 | 2.721888e-54 | -8.615850e-47 |
| Msa0120370 | Msa0617410 | 0.800904 | 1.158015e-48 | -8.615850e-47 |
| Msa0617410 | Msa0651190 | -0.800867 | 1.178077e-48 | -8.615850e-47 |
| Msa0617410 | Msa0737800 | -0.812915 | 3.333469e-51 | -8.615850e-47 |
| Msa0617410 | Msa0817270 | -0.811040 | 8.541147e-51 | -8.615850e-47 |
| Msa0617410 | Msa0908170 | -0.858149 | 1.004154e-62 | -8.615850e-47 |
| Msa0617410 | Msa0946690 | 0.803777 | 2.965043e-49 | -8.615850e-47 |
| Msa0617410 | Msa1040520 | -0.818767 | 1.650651e-52 | -8.615850e-47 |
| Msa0617410 | Msa1073070 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0617410 | Msa1080160 | -0.800930 | 1.143698e-48 | -8.615850e-47 |
| Msa0617410 | Msa1087470 | -0.803933 | 2.751949e-49 | -8.615850e-47 |
| Msa0617410 | Msa1130270 | 0.800807 | 1.212039e-48 | -8.615850e-47 |
| Msa0617410 | Msa1214880 | -0.806950 | 6.411462e-50 | -8.615850e-47 |
| Msa0617410 | Msa1331920 | -0.808629 | 2.819116e-50 | -8.615850e-47 |
| Msa0617410 | Msa1404540 | -0.816385 | 5.683016e-52 | -8.615850e-47 |
| Msa0617410 | Msa1417810 | 0.800313 | 1.528131e-48 | -8.615850e-47 |
| Msa0617410 | Msa1431060 | -0.816733 | 4.750197e-52 | -8.615850e-47 |
| Msa0617410 | Msa1440600 | -0.826227 | 3.046312e-54 | -8.615850e-47 |
| Msa0617410 | Msa1449350 | 0.804267 | 2.345354e-49 | -8.615850e-47 |
| Msa0163620 | Msa0617410 | 0.804292 | 2.317196e-49 | -8.615850e-47 |
| Msa0212750 | Msa0617410 | 0.817678 | 2.910670e-52 | -8.615850e-47 |
| Msa0236700 | Msa0617410 | 0.802913 | 4.477546e-49 | -8.615850e-47 |
| Msa0464900 | Msa0617410 | -0.842657 | 2.261528e-58 | -8.615850e-47 |
| Msa0260810 | Msa0617410 | -0.827604 | 1.427127e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617410 | MtrunA17_Chr8g0377011 | 95.072 | 345 | 17 | 0 | 11 | 355 | 26 | 370 | 0.0 | 667 |
| Msa0617410 | MtrunA17_Chr8g0377031 | 60.417 | 144 | 48 | 3 | 12 | 154 | 30 | 165 | 5.29e-53 | 173 |
| Msa0617410 | MtrunA17_Chr8g0377021 | 82.353 | 34 | 6 | 0 | 307 | 340 | 1 | 34 | 1.87e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617410 | AT5G11010.4 | 53.868 | 349 | 146 | 7 | 13 | 355 | 29 | 368 | 5.88e-125 | 364 |
| Msa0617410 | AT5G11010.2 | 53.868 | 349 | 146 | 7 | 13 | 355 | 29 | 368 | 5.88e-125 | 364 |
| Msa0617410 | AT5G11010.3 | 53.868 | 349 | 146 | 7 | 13 | 355 | 29 | 368 | 5.88e-125 | 364 |
| Msa0617410 | AT5G11010.1 | 51.379 | 290 | 126 | 7 | 13 | 296 | 29 | 309 | 4.85e-97 | 291 |
Find 113 sgRNAs with CRISPR-Local
Find 480 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATAAACAAGTAGGAATT+TGG | 0.234721 | 4_2:+67859662 | None:intergenic |
| CACCGTGTCTAATTTAAATT+AGG | 0.238683 | 4_2:+67857484 | None:intergenic |
| AATACTTCTGGCTGGGTTAA+AGG | 0.244134 | 4_2:-67862823 | Msa0617410:intron |
| GTTGCGGGTTTGTTACAAAT+TGG | 0.257826 | 4_2:-67857590 | Msa0617410:three_prime_UTR |
| ATTTACCTGCTGGAAAATTC+TGG | 0.277149 | 4_2:-67862558 | Msa0617410:CDS |
| TCTTGCATCTGGTTGCTAAT+AGG | 0.301989 | 4_2:+67863843 | None:intergenic |
| AATTCCTACTTGTTTATTGC+AGG | 0.309415 | 4_2:-67859659 | Msa0617410:intron |
| CGAGATAGATTCAGTTCTTA+AGG | 0.329341 | 4_2:-67862500 | Msa0617410:CDS |
| CAAACTGAGTTTACTCCTCT+TGG | 0.341189 | 4_2:-67863791 | Msa0617410:CDS |
| GCTGGAAAATTCTGGTTAGA+TGG | 0.341592 | 4_2:-67862550 | Msa0617410:CDS |
| ATAAGCTACTTTCTTGCATC+TGG | 0.349894 | 4_2:+67863832 | None:intergenic |
| GCAGCTTGTGACCATTCATC+TGG | 0.352128 | 4_2:+67863962 | None:intergenic |
| CCCCAGGGAGTTTGTTCAAA+AGG | 0.361346 | 4_2:-67862372 | Msa0617410:intron |
| GTTGATTTGCCAACACTTCC+AGG | 0.361840 | 4_2:+67863890 | None:intergenic |
| AGTACTTGAAACCATCAAAA+AGG | 0.368009 | 4_2:-67863615 | Msa0617410:intron |
| TGGTTGCTAATAGGAGATTA+AGG | 0.374760 | 4_2:+67863852 | None:intergenic |
| AACACTGATGGATCTATCTT+AGG | 0.381453 | 4_2:+67862946 | None:intergenic |
| CCCACACATGTTGTTAAGAT+AGG | 0.383733 | 4_2:-67862610 | Msa0617410:CDS |
| ATTTGCCTCTGTATTGTTGC+GGG | 0.383905 | 4_2:-67857605 | Msa0617410:three_prime_UTR |
| CCTCTTATAGTGAATACTTC+TGG | 0.384908 | 4_2:-67862835 | Msa0617410:CDS |
| TCATCTGGGATGAAAATATC+TGG | 0.385934 | 4_2:+67863977 | None:intergenic |
| TTGCGGGTTTGTTACAAATT+GGG | 0.391680 | 4_2:-67857589 | Msa0617410:three_prime_UTR |
| AGCCAACAATACTAGCATTC+AGG | 0.392276 | 4_2:+67861774 | None:intergenic |
| TTACCCTGGTGCCTTGGTCT+TGG | 0.393880 | 4_2:-67861722 | Msa0617410:intron |
| GTTGTATTTGAACCATTTGC+AGG | 0.396603 | 4_2:+67857531 | None:intergenic |
| GTCGTACTCGTTTGTGGACC+TGG | 0.396974 | 4_2:-67863908 | Msa0617410:CDS |
| CCAGAAGTATTCACTATAAG+AGG | 0.406197 | 4_2:+67862835 | None:intergenic |
| GGCCTGAATGCTAGTATTGT+TGG | 0.412902 | 4_2:-67861776 | Msa0617410:CDS |
| TTATAGTGAATACTTCTGGC+TGG | 0.413967 | 4_2:-67862831 | Msa0617410:CDS |
| GTGGACATGCTAAAATATAT+TGG | 0.414066 | 4_2:-67862634 | Msa0617410:CDS |
| CAAGAGGAGTAAACTCAGTT+TGG | 0.425282 | 4_2:+67863792 | None:intergenic |
| AAAAGTCAACCTCTTGCTAC+AGG | 0.438339 | 4_2:-67859692 | Msa0617410:CDS |
| CCTGCGTGGCGAACGGATAG+TGG | 0.442876 | 4_2:-67862339 | Msa0617410:CDS |
| CCGTAGAATATTTCAGAGCT+TGG | 0.444402 | 4_2:+67861797 | None:intergenic |
| TATATTCTACTTCCTGCAAA+TGG | 0.444424 | 4_2:-67857543 | Msa0617410:three_prime_UTR |
| CCTCCCGTCGTACTCGTTTG+TGG | 0.446281 | 4_2:-67863914 | Msa0617410:CDS |
| GGAGATTTACCCTGGTGCCT+TGG | 0.462451 | 4_2:-67861728 | Msa0617410:CDS |
| CGAATCTTTATGCTTGCAAT+GGG | 0.463513 | 4_2:+67862224 | None:intergenic |
| TGTTGGTTATGAAGTATTAG+TGG | 0.466461 | 4_2:-67862653 | Msa0617410:CDS |
| CGTAGAATATTTCAGAGCTT+GGG | 0.466484 | 4_2:+67861798 | None:intergenic |
| CTGGAAAATTCTGGTTAGAT+GGG | 0.476615 | 4_2:-67862549 | Msa0617410:CDS |
| CTTGCAATGGGAACTTGATA+AGG | 0.478521 | 4_2:+67862236 | None:intergenic |
| AAATTTAAGAATTTACCTGC+TGG | 0.484367 | 4_2:-67862568 | Msa0617410:CDS |
| TTCAGAGAAACAAATGGCAC+AGG | 0.495894 | 4_2:+67859715 | None:intergenic |
| TGTAAGGTGATAAGCGTCCT+TGG | 0.498324 | 4_2:+67857746 | None:intergenic |
| ACGGCGCGCGGCAGCGATGA+GGG | 0.498934 | 4_2:+67864186 | None:intergenic |
| CTTACCTGCAATAAACAAGT+AGG | 0.503057 | 4_2:+67859655 | None:intergenic |
| AATACATTCTCTGATATGTA+AGG | 0.508201 | 4_2:+67857730 | None:intergenic |
| ACAGACAGAGAGACAGCAAT+GGG | 0.510444 | 4_2:-67864013 | Msa0617410:intron |
| CAGCTTGTGACCATTCATCT+GGG | 0.510594 | 4_2:+67863963 | None:intergenic |
| CAGCGGAGCAACGGCGGTGA+GGG | 0.511141 | 4_2:+67864219 | None:intergenic |
| CTCGTCTCCTGCGTGGCGAA+CGG | 0.511504 | 4_2:-67862346 | Msa0617410:CDS |
| ATGAGGGAAGCTGTAGGCAG+CGG | 0.514006 | 4_2:+67864202 | None:intergenic |
| TAGATTCAGTTCTTAAGGAC+CGG | 0.517139 | 4_2:-67862495 | Msa0617410:intron |
| TCGAATCTTTATGCTTGCAA+TGG | 0.517870 | 4_2:+67862223 | None:intergenic |
| AGCTGTAGGCAGCGGAGCAA+CGG | 0.519519 | 4_2:+67864210 | None:intergenic |
| TGGTTAGATGGGGAAGATGA+TGG | 0.521887 | 4_2:-67862538 | Msa0617410:CDS |
| CTTAAATTTATAAAATTCAG+TGG | 0.522288 | 4_2:+67862582 | None:intergenic |
| TATAGTGAATACTTCTGGCT+GGG | 0.525760 | 4_2:-67862830 | Msa0617410:CDS |
| CCTACCAAGACCAAGGCACC+AGG | 0.529524 | 4_2:+67861718 | None:intergenic |
| GTTGTTTACGAAGTTACTCC+AGG | 0.545994 | 4_2:-67863752 | Msa0617410:intron |
| CCAAGCTCTGAAATATTCTA+CGG | 0.547357 | 4_2:-67861797 | Msa0617410:CDS |
| GCCTATCTTAACAACATGTG+TGG | 0.557846 | 4_2:+67862609 | None:intergenic |
| AGGCACCAGGGTAAATCTCC+AGG | 0.558138 | 4_2:+67861731 | None:intergenic |
| AATTTGCCTCTGTATTGTTG+CGG | 0.558483 | 4_2:-67857606 | Msa0617410:three_prime_UTR |
| GCAGTTGAATCTGAAGTACC+TGG | 0.560619 | 4_2:-67861749 | Msa0617410:CDS |
| TTCAGATATGTCATCGGACA+AGG | 0.564343 | 4_2:-67862288 | Msa0617410:CDS |
| GGGATGAAAATATCTGGTGA+AGG | 0.564972 | 4_2:+67863983 | None:intergenic |
| TAGGAGATTAAGGAGATAGC+GGG | 0.565444 | 4_2:+67863862 | None:intergenic |
| AGGGGCATTGACACGGTCAA+AGG | 0.567190 | 4_2:-67859757 | Msa0617410:CDS |
| ACACTAATGACGGCGAGGCT+AGG | 0.569762 | 4_2:+67864242 | None:intergenic |
| GGTCCACAAACGAGTACGAC+GGG | 0.570389 | 4_2:+67863911 | None:intergenic |
| GACGGCGCGCGGCAGCGATG+AGG | 0.572173 | 4_2:+67864185 | None:intergenic |
| GCAGCGGAGCAACGGCGGTG+AGG | 0.578323 | 4_2:+67864218 | None:intergenic |
| GTCTCATCACCGTTCATCTG+AGG | 0.578983 | 4_2:-67864165 | Msa0617410:intron |
| CTTGTGACACAGGAATTGTG+AGG | 0.582422 | 4_2:-67859777 | Msa0617410:intron |
| ACATACTCTAAGAACACTGA+TGG | 0.583221 | 4_2:+67862934 | None:intergenic |
| GGATGAAAATATCTGGTGAA+GGG | 0.583452 | 4_2:+67863984 | None:intergenic |
| ATAAGGACAGTGAGATGTCA+AGG | 0.584321 | 4_2:+67862253 | None:intergenic |
| TTCATGGAAGCAGTAGCACA+TGG | 0.584672 | 4_2:-67857684 | Msa0617410:three_prime_UTR |
| CCACTATCCGTTCGCCACGC+AGG | 0.585492 | 4_2:+67862339 | None:intergenic |
| TTGTGACACAGGAATTGTGA+GGG | 0.589012 | 4_2:-67859776 | Msa0617410:intron |
| AACGGTGATGAGACGGCGCG+CGG | 0.592233 | 4_2:+67864174 | None:intergenic |
| TGTAGGCAGCGGAGCAACGG+CGG | 0.592781 | 4_2:+67864213 | None:intergenic |
| CAGGGAGTTTGTTCAAAAGG+AGG | 0.595105 | 4_2:-67862369 | Msa0617410:CDS |
| GGATATCACCCTGTAGCAAG+AGG | 0.602061 | 4_2:+67859683 | None:intergenic |
| ATTAAGGAGATAGCGGGCGA+AGG | 0.607891 | 4_2:+67863868 | None:intergenic |
| TCAGATGAACGGTGATGAGA+CGG | 0.609180 | 4_2:+67864167 | None:intergenic |
| GATTCGACATGTTCATCGTG+AGG | 0.617943 | 4_2:-67862207 | Msa0617410:intron |
| CCTATCTTAACAACATGTGT+GGG | 0.620818 | 4_2:+67862610 | None:intergenic |
| GCTTATCTTGATACCGACGT+TGG | 0.626457 | 4_2:-67863815 | Msa0617410:CDS |
| AAGTACCTGGAGATTTACCC+TGG | 0.626705 | 4_2:-67861736 | Msa0617410:CDS |
| GTTTGTGGACCTGGAAGTGT+TGG | 0.628940 | 4_2:-67863899 | Msa0617410:CDS |
| TAGTGATTCAGATATGTCAT+CGG | 0.630930 | 4_2:-67862294 | Msa0617410:CDS |
| AATTGTGAGGGGCATTGACA+CGG | 0.634135 | 4_2:-67859764 | Msa0617410:CDS |
| GCAGCGATGAGGGAAGCTGT+AGG | 0.641779 | 4_2:+67864196 | None:intergenic |
| AAAGTCAACCTCTTGCTACA+GGG | 0.642893 | 4_2:-67859691 | Msa0617410:CDS |
| GTTAGAGAGATTAAACCAAG+AGG | 0.643471 | 4_2:+67863776 | None:intergenic |
| TGGAAAATTCTGGTTAGATG+GGG | 0.652558 | 4_2:-67862548 | Msa0617410:CDS |
| GACAGACAGAGAGACAGCAA+TGG | 0.654238 | 4_2:-67864014 | Msa0617410:intron |
| AGGAGTATACCTCAGATGAA+CGG | 0.659634 | 4_2:+67864156 | None:intergenic |
| ATAGGAGATTAAGGAGATAG+CGG | 0.661098 | 4_2:+67863861 | None:intergenic |
| AAGGAGGCTCGTCTCCTGCG+TGG | 0.674748 | 4_2:-67862353 | Msa0617410:CDS |
| CCACAAACGAGTACGACGGG+AGG | 0.678624 | 4_2:+67863914 | None:intergenic |
| TGTGACACAGGAATTGTGAG+GGG | 0.679439 | 4_2:-67859775 | Msa0617410:intron |
| GATGACATATCTGAATCACT+AGG | 0.681511 | 4_2:+67862296 | None:intergenic |
| CAAGTTACCTACCAAGACCA+AGG | 0.684244 | 4_2:+67861711 | None:intergenic |
| GCGGTGAGGGACACTAATGA+CGG | 0.685487 | 4_2:+67864232 | None:intergenic |
| AGGTCCACAAACGAGTACGA+CGG | 0.697355 | 4_2:+67863910 | None:intergenic |
| AAACTCAGTTTGGCCAACGT+CGG | 0.697748 | 4_2:+67863802 | None:intergenic |
| GAGGGACACTAATGACGGCG+AGG | 0.712205 | 4_2:+67864237 | None:intergenic |
| CTACCAAGACCAAGGCACCA+GGG | 0.712305 | 4_2:+67861719 | None:intergenic |
| ACAAACCCGCAACAATACAG+AGG | 0.718925 | 4_2:+67857600 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTGTTTATTTTTATATAA+AGG | - | chr4_2:67859903-67859922 | Msa0617410:intron | 10.0% |
| !!! | GTTTTTTTTTTTTTAATTGA+AGG | - | chr4_2:67863015-67863034 | Msa0617410:intron | 10.0% |
| !!! | TATTTGAAATTTCAAAAGAA+CGG | - | chr4_2:67858411-67858430 | Msa0617410:intron | 15.0% |
| !! | CTTAAATTTATAAAATTCAG+TGG | + | chr4_2:67859187-67859206 | None:intergenic | 15.0% |
| !!! | AAAATATTTGAAATTCAAAG+TGG | + | chr4_2:67859803-67859822 | None:intergenic | 15.0% |
| !!! | AATTCTCTAAAATTATAAAG+GGG | + | chr4_2:67862385-67862404 | None:intergenic | 15.0% |
| !!! | GAATTCTCTAAAATTATAAA+GGG | + | chr4_2:67862386-67862405 | None:intergenic | 15.0% |
| !!! | TGAATTCTCTAAAATTATAA+AGG | + | chr4_2:67862387-67862406 | None:intergenic | 15.0% |
| !!! | CAATATTTTATTTGATTAAG+AGG | - | chr4_2:67863201-67863220 | Msa0617410:intron | 15.0% |
| !!! | ACTTTTTATATGACAATTTA+TGG | - | chr4_2:67863250-67863269 | Msa0617410:intron | 15.0% |
| !!! | CTTTTTATATGACAATTTAT+GGG | - | chr4_2:67863251-67863270 | Msa0617410:intron | 15.0% |
| !! | TAAAACTATAGTAATAGTAA+TGG | + | chr4_2:67863396-67863415 | None:intergenic | 15.0% |
| !! | ACGAAAATAAAAATAGTATT+AGG | + | chr4_2:67864125-67864144 | None:intergenic | 15.0% |
| !! | GTAAAAATGAAGATTAAGAT+AGG | + | chr4_2:67858058-67858077 | None:intergenic | 20.0% |
| !!! | TGAATTTGAAATATTTGACA+AGG | - | chr4_2:67858220-67858239 | Msa0617410:intron | 20.0% |
| !!! | TCTTAATGATTGGTTATTTA+TGG | + | chr4_2:67858511-67858530 | None:intergenic | 20.0% |
| !! | TATATGACATTCTTAATGAT+TGG | + | chr4_2:67858521-67858540 | None:intergenic | 20.0% |
| !! | TAATAACAATGAAATAGACT+AGG | + | chr4_2:67858619-67858638 | None:intergenic | 20.0% |
| !!! | CTTTTGATAATGATCATAAA+TGG | + | chr4_2:67858863-67858882 | None:intergenic | 20.0% |
| !! | TACAAAATGTATGATTCAAA+AGG | + | chr4_2:67859002-67859021 | None:intergenic | 20.0% |
| !! | AATAAAACCAAGCATATAAA+GGG | + | chr4_2:67859771-67859790 | None:intergenic | 20.0% |
| !! | TCTATATATACACAAGAATA+AGG | - | chr4_2:67860184-67860203 | Msa0617410:intron | 20.0% |
| !! | AATAAATTTAAACTTCGATC+TGG | - | chr4_2:67861269-67861288 | Msa0617410:intron | 20.0% |
| !! | AATAAATTTAAACTTCGATC+TGG | - | chr4_2:67861269-67861288 | Msa0617410:intron | 20.0% |
| !!! | ATCTATTTCTTGATTTCAAT+AGG | - | chr4_2:67862460-67862479 | Msa0617410:intron | 20.0% |
| !! | TATCTTATTATTAGTGTGTT+TGG | - | chr4_2:67862486-67862505 | Msa0617410:intron | 20.0% |
| !! | ATCTTATTATTAGTGTGTTT+GGG | - | chr4_2:67862487-67862506 | Msa0617410:intron | 20.0% |
| !! | ATAGTATATATATGAGTATC+AGG | - | chr4_2:67862544-67862563 | Msa0617410:CDS | 20.0% |
| !! | AATCAAGAGTTATAATCTTT+GGG | + | chr4_2:67862646-67862665 | None:intergenic | 20.0% |
| !! | AAAGATTATAACTCTTGATT+GGG | - | chr4_2:67862646-67862665 | Msa0617410:CDS | 20.0% |
| !! | TTATTACTTGTAATAAGGAA+GGG | - | chr4_2:67863101-67863120 | Msa0617410:intron | 20.0% |
| !!! | TATTTTATTTGATTAAGAGG+AGG | - | chr4_2:67863204-67863223 | Msa0617410:intron | 20.0% |
| !!! | ATTTTATTTGATTAAGAGGA+GGG | - | chr4_2:67863205-67863224 | Msa0617410:intron | 20.0% |
| !!! | TTTCATTTTTTAATCCAAGT+AGG | - | chr4_2:67863899-67863918 | Msa0617410:CDS | 20.0% |
| !!! | TTCATTTTTTAATCCAAGTA+GGG | - | chr4_2:67863900-67863919 | Msa0617410:CDS | 20.0% |
| !!! | AAAAAACATTACTTCTTTTC+AGG | - | chr4_2:67863996-67864015 | Msa0617410:five_prime_UTR | 20.0% |
| !!! | AAAAGGTTTCTAGTTTAGTT+AGG | + | chr4_2:67857729-67857748 | None:intergenic | 25.0% |
| ! | ATGAAGATTAAGATAGGTAA+TGG | + | chr4_2:67858052-67858071 | None:intergenic | 25.0% |
| ! | TTAAGATAGTTGGTTACTAT+TGG | - | chr4_2:67858336-67858355 | Msa0617410:intron | 25.0% |
| ! | TAAGATAGTTGGTTACTATT+GGG | - | chr4_2:67858337-67858356 | Msa0617410:intron | 25.0% |
| ! | TTATTTATGGTATGTTTGGA+TGG | + | chr4_2:67858498-67858517 | None:intergenic | 25.0% |
| ! | TTGGTTATTTATGGTATGTT+TGG | + | chr4_2:67858502-67858521 | None:intergenic | 25.0% |
| ! | TATTATGTTACTCATTCAGT+TGG | - | chr4_2:67859071-67859090 | Msa0617410:intron | 25.0% |
| ! | AAATTTAAGAATTTACCTGC+TGG | - | chr4_2:67859198-67859217 | Msa0617410:intron | 25.0% |
| ! | CAATAAAACCAAGCATATAA+AGG | + | chr4_2:67859772-67859791 | None:intergenic | 25.0% |
| !!! | TGACCTATGAATATTTTTGT+AGG | - | chr4_2:67859944-67859963 | Msa0617410:intron | 25.0% |
| ! | TTCTCAACATTGAAAAGATT+AGG | - | chr4_2:67860135-67860154 | Msa0617410:intron | 25.0% |
| ! | TGTATATATAGAAAACCCAT+AGG | + | chr4_2:67860176-67860195 | None:intergenic | 25.0% |
| ! | TTCATTGAGTTAAATTCGTT+TGG | + | chr4_2:67860286-67860305 | None:intergenic | 25.0% |
| ! | TCTGCATCATTTACAAAATA+AGG | - | chr4_2:67860311-67860330 | Msa0617410:intron | 25.0% |
| !! | ACGTTTTATCAAAGAAAACT+TGG | + | chr4_2:67860532-67860551 | None:intergenic | 25.0% |
| ! | TTACTTGTAACAGATACAAA+CGG | + | chr4_2:67860889-67860908 | None:intergenic | 25.0% |
| ! | GACATTTGGATTCTAATAAA+AGG | - | chr4_2:67861068-67861087 | Msa0617410:intron | 25.0% |
| ! | TTTCATTAGAATCCAAATGT+CGG | + | chr4_2:67861248-67861267 | None:intergenic | 25.0% |
| ! | CAAAAGGAATATACATTTGT+GGG | - | chr4_2:67861336-67861355 | Msa0617410:intron | 25.0% |
| ! | CAAAAGGAATATACATTTGT+GGG | - | chr4_2:67861336-67861355 | Msa0617410:intron | 25.0% |
| !! | TTAAGTTGTAACACATCTTA+AGG | - | chr4_2:67861557-67861576 | Msa0617410:intron | 25.0% |
| !!! | ACTTTTTTCAGAGAAACAAA+TGG | + | chr4_2:67862060-67862079 | None:intergenic | 25.0% |
| !!! | TTGGTAACACTTTTTTAACA+AGG | + | chr4_2:67862199-67862218 | None:intergenic | 25.0% |
| !! | ATAATTTGTCATAAAATGCG+TGG | - | chr4_2:67862249-67862268 | Msa0617410:CDS | 25.0% |
| ! | TCTTATTATTAGTGTGTTTG+GGG | - | chr4_2:67862488-67862507 | Msa0617410:intron | 25.0% |
| ! | CAATCAAGAGTTATAATCTT+TGG | + | chr4_2:67862647-67862666 | None:intergenic | 25.0% |
| ! | CAAAGATTATAACTCTTGAT+TGG | - | chr4_2:67862645-67862664 | Msa0617410:CDS | 25.0% |
| !!! | ATATTTTTAGCTAGTAGAGA+AGG | - | chr4_2:67862886-67862905 | Msa0617410:CDS | 25.0% |
| !!! | TATTTTTAGCTAGTAGAGAA+GGG | - | chr4_2:67862887-67862906 | Msa0617410:CDS | 25.0% |
| ! | TTGGCTTATTACTTGTAATA+AGG | - | chr4_2:67863096-67863115 | Msa0617410:intron | 25.0% |
| ! | CTTATTACTTGTAATAAGGA+AGG | - | chr4_2:67863100-67863119 | Msa0617410:intron | 25.0% |
| ! | TATTACTTGTAATAAGGAAG+GGG | - | chr4_2:67863102-67863121 | Msa0617410:intron | 25.0% |
| ! | TATTTGATGCAAAAGAATAG+AGG | - | chr4_2:67863137-67863156 | Msa0617410:intron | 25.0% |
| ! | ATTTGATGCAAAAGAATAGA+GGG | - | chr4_2:67863138-67863157 | Msa0617410:intron | 25.0% |
| !!! | TTTTATTTGATTAAGAGGAG+GGG | - | chr4_2:67863206-67863225 | Msa0617410:intron | 25.0% |
| ! | GACAATTTATGGGTATATTT+AGG | - | chr4_2:67863261-67863280 | Msa0617410:intron | 25.0% |
| !! | TATAGTAATAGTAATGGAGA+GGG | + | chr4_2:67863390-67863409 | None:intergenic | 25.0% |
| !! | AAACACAATTATGCAAGTTT+TGG | + | chr4_2:67863455-67863474 | None:intergenic | 25.0% |
| ! | GTGTTTATATTCTCAAAACA+TGG | - | chr4_2:67863469-67863488 | Msa0617410:intron | 25.0% |
| ! | TTGAGAAAAAATGAAAAGAG+GGG | + | chr4_2:67863538-67863557 | None:intergenic | 25.0% |
| ! | GTTGAGAAAAAATGAAAAGA+GGG | + | chr4_2:67863539-67863558 | None:intergenic | 25.0% |
| !!! | GTTTTAGTCTTACTTCTATT+TGG | - | chr4_2:67863624-67863643 | Msa0617410:CDS | 25.0% |
| !! | TGTTAAGAAGTATAGGTTTA+GGG | + | chr4_2:67863803-67863822 | None:intergenic | 25.0% |
| !! | ATGTTAAGAAGTATAGGTTT+AGG | + | chr4_2:67863804-67863823 | None:intergenic | 25.0% |
| !! | AGATTGATGTTAAGAAGTAT+AGG | + | chr4_2:67863810-67863829 | None:intergenic | 25.0% |
| !! | ACATTGAAAGTTTGAAACAT+GGG | + | chr4_2:67863863-67863882 | None:intergenic | 25.0% |
| !! | TACATTGAAAGTTTGAAACA+TGG | + | chr4_2:67863864-67863883 | None:intergenic | 25.0% |
| ! | AATACATTCTCTGATATGTA+AGG | + | chr4_2:67864039-67864058 | None:intergenic | 25.0% |
| !!! | ACCTAGTTTTTTCTTTTTCA+TGG | - | chr4_2:67864066-67864085 | Msa0617410:intron | 25.0% |
| ! | TCCATGAAAAAGAAAAAACT+AGG | + | chr4_2:67864070-67864089 | None:intergenic | 25.0% |
| ACAAAGTGAAGAAAAAGAAG+AGG | + | chr4_2:67857633-67857652 | None:intergenic | 30.0% | |
| ! | ATATTTTCATCCCAGATGAA+TGG | - | chr4_2:67857793-67857812 | Msa0617410:intron | 30.0% |
| AGTACTTGAAACCATCAAAA+AGG | - | chr4_2:67858151-67858170 | Msa0617410:intron | 30.0% | |
| ! | CATAGTCTATACCTTTTTGA+TGG | + | chr4_2:67858165-67858184 | None:intergenic | 30.0% |
| GCACATAATCACTATTCATT+AGG | - | chr4_2:67858268-67858287 | Msa0617410:intron | 30.0% | |
| CATTAGGTACATGTAAAGTT+TGG | - | chr4_2:67858284-67858303 | Msa0617410:intron | 30.0% | |
| ! | GTGTTATTCAATTGCTAGTT+AGG | - | chr4_2:67858313-67858332 | Msa0617410:intron | 30.0% |
| AAGATAGTTGGTTACTATTG+GGG | - | chr4_2:67858338-67858357 | Msa0617410:intron | 30.0% | |
| ! | GTTTTCTATATACAGTGAAG+TGG | - | chr4_2:67858640-67858659 | Msa0617410:intron | 30.0% |
| AGGATATATTTGACTCTGTT+AGG | - | chr4_2:67858685-67858704 | Msa0617410:intron | 30.0% | |
| GGATATATTTGACTCTGTTA+GGG | - | chr4_2:67858686-67858705 | Msa0617410:intron | 30.0% | |
| ATGTTCGTTCAAATAAGACT+TGG | + | chr4_2:67858721-67858740 | None:intergenic | 30.0% | |
| ! | ACGAACATGTTTACTTGTTA+TGG | - | chr4_2:67858733-67858752 | Msa0617410:intron | 30.0% |
| ! | TCTGTCATTTATTCCATAAC+AGG | - | chr4_2:67858773-67858792 | Msa0617410:intron | 30.0% |
| !!! | AGCATTTTTTCGCTTATCAA+AGG | + | chr4_2:67858896-67858915 | None:intergenic | 30.0% |
| AATTGATATGTTGTTAGTCC+AGG | + | chr4_2:67859052-67859071 | None:intergenic | 30.0% | |
| ! | TGTTGGTTATGAAGTATTAG+TGG | - | chr4_2:67859113-67859132 | Msa0617410:intron | 30.0% |
| GTGGACATGCTAAAATATAT+TGG | - | chr4_2:67859132-67859151 | Msa0617410:intron | 30.0% | |
| ACCATCTTTAACTGCTAATT+TGG | - | chr4_2:67859315-67859334 | Msa0617410:intron | 30.0% | |
| ACCAAATTAGCAGTTAAAGA+TGG | + | chr4_2:67859319-67859338 | None:intergenic | 30.0% | |
| TAATAGAATATTGTTTCCCC+AGG | - | chr4_2:67859378-67859397 | Msa0617410:intron | 30.0% | |
| AATAGAATATTGTTTCCCCA+GGG | - | chr4_2:67859379-67859398 | Msa0617410:intron | 30.0% | |
| TAGTGATTCAGATATGTCAT+CGG | - | chr4_2:67859472-67859491 | Msa0617410:intron | 30.0% | |
| GGACCTACAAAAATATTCAT+AGG | + | chr4_2:67859950-67859969 | None:intergenic | 30.0% | |
| TAGTAAATCCCAAACATCAT+CGG | + | chr4_2:67860246-67860265 | None:intergenic | 30.0% | |
| TGGAATATTGTATACATGCT+GGG | + | chr4_2:67860423-67860442 | None:intergenic | 30.0% | |
| GTATACAATATTCCAGAACA+TGG | - | chr4_2:67860428-67860447 | Msa0617410:intron | 30.0% | |
| ATCAAAGAAAACTTGGAAAG+TGG | + | chr4_2:67860525-67860544 | None:intergenic | 30.0% | |
| TTAATTTCATGTTCTGCCTT+AGG | + | chr4_2:67860756-67860775 | None:intergenic | 30.0% | |
| GACTTGTGATTATGTCTAAA+TGG | - | chr4_2:67860789-67860808 | Msa0617410:intron | 30.0% | |
| ! | ACATCATTTTACTAATTCCG+TGG | - | chr4_2:67860961-67860980 | Msa0617410:intron | 30.0% |
| !!! | AATGTCGATTTTTGTTTACG+AGG | + | chr4_2:67861054-67861073 | None:intergenic | 30.0% |
| CGTAAACAAAAATCGACATT+TGG | - | chr4_2:67861054-67861073 | Msa0617410:intron | 30.0% | |
| ! | CCACAAATGTATATTCCTTT+TGG | + | chr4_2:67861338-67861357 | None:intergenic | 30.0% |
| CCAAAAGGAATATACATTTG+TGG | - | chr4_2:67861335-67861354 | Msa0617410:intron | 30.0% | |
| TTCACTGTATCTCATACATT+TGG | - | chr4_2:67861391-67861410 | Msa0617410:intron | 30.0% | |
| GGATATCATTAAACACCAAA+AGG | - | chr4_2:67861448-67861467 | Msa0617410:intron | 30.0% | |
| ! | CCACAAATGTATATTCCTTT+TGG | + | chr4_2:67861338-67861357 | None:intergenic | 30.0% |
| CCAAAAGGAATATACATTTG+TGG | - | chr4_2:67861335-67861354 | Msa0617410:intron | 30.0% | |
| TTCTTTATCTTCTGTATCTG+TGG | + | chr4_2:67861612-67861631 | None:intergenic | 30.0% | |
| ! | TGATCTTCTAGTTATGCATT+TGG | - | chr4_2:67861696-67861715 | Msa0617410:intron | 30.0% |
| ! | GATCTTCTAGTTATGCATTT+GGG | - | chr4_2:67861697-67861716 | Msa0617410:intron | 30.0% |
| ATTTGGGAAATTCTAAGTGT+TGG | - | chr4_2:67861713-67861732 | Msa0617410:intron | 30.0% | |
| ! | ATGCTTAGTGTTGAAATTTG+GGG | + | chr4_2:67861943-67861962 | None:intergenic | 30.0% |
| ! | GATGCTTAGTGTTGAAATTT+GGG | + | chr4_2:67861944-67861963 | None:intergenic | 30.0% |
| ! | TGATGCTTAGTGTTGAAATT+TGG | + | chr4_2:67861945-67861964 | None:intergenic | 30.0% |
| GCAATAAACAAGTAGGAATT+TGG | + | chr4_2:67862107-67862126 | None:intergenic | 30.0% | |
| AATTCCTACTTGTTTATTGC+AGG | - | chr4_2:67862107-67862126 | Msa0617410:intron | 30.0% | |
| ACAAGTTAATGTTGAGAAGA+AGG | + | chr4_2:67862161-67862180 | None:intergenic | 30.0% | |
| GACAACATAATAAAGCTGTT+TGG | + | chr4_2:67862218-67862237 | None:intergenic | 30.0% | |
| AATGAACAGAACTGATAGAA+GGG | + | chr4_2:67862755-67862774 | None:intergenic | 30.0% | |
| CATTATGTTACGTTTGAATC+AGG | - | chr4_2:67862814-67862833 | Msa0617410:intron | 30.0% | |
| TCATCTTAAGATTCTGATGA+AGG | - | chr4_2:67862966-67862985 | Msa0617410:CDS | 30.0% | |
| TTGCTAGGTTCTTTACTATA+TGG | - | chr4_2:67862989-67863008 | Msa0617410:intron | 30.0% | |
| TGCTAGGTTCTTTACTATAT+GGG | - | chr4_2:67862990-67863009 | Msa0617410:intron | 30.0% | |
| !! | TTTTTAATTGAAGGAAGCAC+TGG | - | chr4_2:67863024-67863043 | Msa0617410:intron | 30.0% |
| ! | TGTTCTTTTTCTTATGCTCT+TGG | - | chr4_2:67863077-67863096 | Msa0617410:intron | 30.0% |
| TTTGATGCAAAAGAATAGAG+GGG | - | chr4_2:67863139-67863158 | Msa0617410:intron | 30.0% | |
| TTTATTTGATTAAGAGGAGG+GGG | - | chr4_2:67863207-67863226 | Msa0617410:intron | 30.0% | |
| ! | CTATAGTAATAGTAATGGAG+AGG | + | chr4_2:67863391-67863410 | None:intergenic | 30.0% |
| !! | ACAATTATGCAAGTTTTGGT+GGG | + | chr4_2:67863451-67863470 | None:intergenic | 30.0% |
| ATATTCTCAAAACATGGAGA+AGG | - | chr4_2:67863475-67863494 | Msa0617410:intron | 30.0% | |
| GAGAAGGTTAAAAAATGAAG+AGG | - | chr4_2:67863491-67863510 | Msa0617410:intron | 30.0% | |
| TGAGAAAAAATGAAAAGAGG+GGG | + | chr4_2:67863537-67863556 | None:intergenic | 30.0% | |
| GGTTGAGAAAAAATGAAAAG+AGG | + | chr4_2:67863540-67863559 | None:intergenic | 30.0% | |
| ATCTAAATATGTCCTGCATA+GGG | + | chr4_2:67863566-67863585 | None:intergenic | 30.0% | |
| AATCTAAATATGTCCTGCAT+AGG | + | chr4_2:67863567-67863586 | None:intergenic | 30.0% | |
| ! | GTCTTACTTCTATTTGGTTT+AGG | - | chr4_2:67863630-67863649 | Msa0617410:CDS | 30.0% |
| ! | GTACTGATAATTAGTACTAC+CGG | + | chr4_2:67863668-67863687 | None:intergenic | 30.0% |
| ! | TTTTTAATCCAAGTAGGGAA+AGG | - | chr4_2:67863905-67863924 | Msa0617410:CDS | 30.0% |
| TATATTCTACTTCCTGCAAA+TGG | - | chr4_2:67864223-67864242 | Msa0617410:five_prime_UTR | 30.0% | |
| TAGGCATATTTGCAAACAGT+TGG | + | chr4_2:67857710-67857729 | None:intergenic | 35.0% | |
| TCTCTCTGTCTGTCAAAAAA+AGG | + | chr4_2:67857746-67857765 | None:intergenic | 35.0% | |
| GGATGAAAATATCTGGTGAA+GGG | + | chr4_2:67857785-67857804 | None:intergenic | 35.0% | |
| ! | TCATCTGGGATGAAAATATC+TGG | + | chr4_2:67857792-67857811 | None:intergenic | 35.0% |
| ATAGGAGATTAAGGAGATAG+CGG | + | chr4_2:67857908-67857927 | None:intergenic | 35.0% | |
| TGGTTGCTAATAGGAGATTA+AGG | + | chr4_2:67857917-67857936 | None:intergenic | 35.0% | |
| ! | ATAAGCTACTTTCTTGCATC+TGG | + | chr4_2:67857937-67857956 | None:intergenic | 35.0% |
| GTTAGAGAGATTAAACCAAG+AGG | + | chr4_2:67857993-67858012 | None:intergenic | 35.0% | |
| ! | CTCTACTTGTTAAGTTGTGA+TGG | - | chr4_2:67858246-67858265 | Msa0617410:intron | 35.0% |
| GCTAGTTAGGTTAAGATAGT+TGG | - | chr4_2:67858326-67858345 | Msa0617410:intron | 35.0% | |
| AGATAGTTGGTTACTATTGG+GGG | - | chr4_2:67858339-67858358 | Msa0617410:intron | 35.0% | |
| AGTCGAACTGTCAAAACATT+AGG | - | chr4_2:67858378-67858397 | Msa0617410:intron | 35.0% | |
| GTCGAACTGTCAAAACATTA+GGG | - | chr4_2:67858379-67858398 | Msa0617410:intron | 35.0% | |
| CTTACAGCATCTTCAAAAAC+AGG | + | chr4_2:67858586-67858605 | None:intergenic | 35.0% | |
| TCTATATACAGTGAAGTGGA+TGG | - | chr4_2:67858644-67858663 | Msa0617410:intron | 35.0% | |
| GGTATTTATTGTCTGTTTGC+AGG | - | chr4_2:67858665-67858684 | Msa0617410:intron | 35.0% | |
| GTTCAAATAAGACTTGGATC+AGG | + | chr4_2:67858715-67858734 | None:intergenic | 35.0% | |
| CAAAGAAAAGAGACCTGTTA+TGG | + | chr4_2:67858789-67858808 | None:intergenic | 35.0% | |
| ! | CATAACAGGTCTCTTTTCTT+TGG | - | chr4_2:67858787-67858806 | Msa0617410:intron | 35.0% |
| ! | AACACTGATGGATCTATCTT+AGG | + | chr4_2:67858823-67858842 | None:intergenic | 35.0% |
| ! | ACATACTCTAAGAACACTGA+TGG | + | chr4_2:67858835-67858854 | None:intergenic | 35.0% |
| !! | CCAGAAGTATTCACTATAAG+AGG | + | chr4_2:67858934-67858953 | None:intergenic | 35.0% |
| CCTCTTATAGTGAATACTTC+TGG | - | chr4_2:67858931-67858950 | Msa0617410:intron | 35.0% | |
| TTATAGTGAATACTTCTGGC+TGG | - | chr4_2:67858935-67858954 | Msa0617410:intron | 35.0% | |
| ! | TATAGTGAATACTTCTGGCT+GGG | - | chr4_2:67858936-67858955 | Msa0617410:intron | 35.0% |
| !!! | TTGGTTTTGTCTTGCATTTC+AGG | - | chr4_2:67859090-67859109 | Msa0617410:intron | 35.0% |
| CCTATCTTAACAACATGTGT+GGG | + | chr4_2:67859159-67859178 | None:intergenic | 35.0% | |
| ATTTACCTGCTGGAAAATTC+TGG | - | chr4_2:67859208-67859227 | Msa0617410:intron | 35.0% | |
| ! | CTGGAAAATTCTGGTTAGAT+GGG | - | chr4_2:67859217-67859236 | Msa0617410:intron | 35.0% |
| ! | TGGAAAATTCTGGTTAGATG+GGG | - | chr4_2:67859218-67859237 | Msa0617410:intron | 35.0% |
| CGAGATAGATTCAGTTCTTA+AGG | - | chr4_2:67859266-67859285 | Msa0617410:intron | 35.0% | |
| TAGATTCAGTTCTTAAGGAC+CGG | - | chr4_2:67859271-67859290 | Msa0617410:intron | 35.0% | |
| GATGACATATCTGAATCACT+AGG | + | chr4_2:67859473-67859492 | None:intergenic | 35.0% | |
| CGAATCTTTATGCTTGCAAT+GGG | + | chr4_2:67859545-67859564 | None:intergenic | 35.0% | |
| TCGAATCTTTATGCTTGCAA+TGG | + | chr4_2:67859546-67859565 | None:intergenic | 35.0% | |
| ! | AGTTGATGCTTGTAACTTGA+TGG | - | chr4_2:67859643-67859662 | Msa0617410:intron | 35.0% |
| CGTAGAATATTTCAGAGCTT+GGG | + | chr4_2:67859971-67859990 | None:intergenic | 35.0% | |
| !! | CCAAGCTCTGAAATATTCTA+CGG | - | chr4_2:67859969-67859988 | Msa0617410:intron | 35.0% |
| !!! | TGACGACACATTTTGGAATT+TGG | + | chr4_2:67860089-67860108 | None:intergenic | 35.0% |
| ! | CAAGATATGACGACACATTT+TGG | + | chr4_2:67860096-67860115 | None:intergenic | 35.0% |
| CATATCTTGCTCTCAAATAG+AGG | - | chr4_2:67860107-67860126 | Msa0617410:intron | 35.0% | |
| ATCCAAAACAGAACACCTAT+GGG | - | chr4_2:67860158-67860177 | Msa0617410:intron | 35.0% | |
| TGACTAAATCCGATGATGTT+TGG | - | chr4_2:67860234-67860253 | Msa0617410:intron | 35.0% | |
| GACTAAATCCGATGATGTTT+GGG | - | chr4_2:67860235-67860254 | Msa0617410:intron | 35.0% | |
| TGGGATTTACTAACTGACTA+AGG | - | chr4_2:67860254-67860273 | Msa0617410:intron | 35.0% | |
| AAATACCTTCATCAGCTTGA+GGG | + | chr4_2:67860394-67860413 | None:intergenic | 35.0% | |
| TAAATACCTTCATCAGCTTG+AGG | + | chr4_2:67860395-67860414 | None:intergenic | 35.0% | |
| TATTGTATACATGCTGGGAA+TGG | + | chr4_2:67860418-67860437 | None:intergenic | 35.0% | |
| CTGGAATATTGTATACATGC+TGG | + | chr4_2:67860424-67860443 | None:intergenic | 35.0% | |
| TTGCTGATGTACTTACCAAA+GGG | + | chr4_2:67860464-67860483 | None:intergenic | 35.0% | |
| TTATCACGACAAAGTCTCAT+TGG | - | chr4_2:67860621-67860640 | Msa0617410:intron | 35.0% | |
| ATTGGAAGATCACATAGGAT+GGG | + | chr4_2:67860647-67860666 | None:intergenic | 35.0% | |
| TGAAGATTGGAAGATCACAT+AGG | + | chr4_2:67860652-67860671 | None:intergenic | 35.0% | |
| ATGTGATCTTCCAATCTTCA+CGG | - | chr4_2:67860652-67860671 | Msa0617410:intron | 35.0% | |
| TAAAGATCATCCGTGAAGAT+TGG | + | chr4_2:67860665-67860684 | None:intergenic | 35.0% | |
| CACGAAAACCACAAAATAGA+GGG | + | chr4_2:67861013-67861032 | None:intergenic | 35.0% | |
| !! | GATTTTTGTTTACGAGGCAT+TGG | + | chr4_2:67861048-67861067 | None:intergenic | 35.0% |
| ATAAAAGGATTCCTTACGCA+TGG | - | chr4_2:67861083-67861102 | Msa0617410:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr4_2:67861148-67861167 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr4_2:67861147-67861166 | Msa0617410:intron | 35.0% |
| ATTAGAATCCAAATGTCGGA+GGG | + | chr4_2:67861244-67861263 | None:intergenic | 35.0% | |
| CTGGATATCATTCAAACTCT+CGG | - | chr4_2:67861288-67861307 | Msa0617410:intron | 35.0% | |
| AGGAATATACATTTGTGGGT+TGG | - | chr4_2:67861340-67861359 | Msa0617410:intron | 35.0% | |
| ACTGTATCTCATACGTTTGT+TGG | - | chr4_2:67861367-67861386 | Msa0617410:intron | 35.0% | |
| ACTGTATCTCATACGTTTGT+TGG | - | chr4_2:67861367-67861386 | Msa0617410:intron | 35.0% | |
| !! | CATACGTTTGTTGGCTTTAA+CGG | - | chr4_2:67861504-67861523 | Msa0617410:intron | 35.0% |
| !! | ATACGTTTGTTGGCTTTAAC+GGG | - | chr4_2:67861505-67861524 | Msa0617410:intron | 35.0% |
| TGCATAACTAGAAGATCAGA+TGG | + | chr4_2:67861694-67861713 | None:intergenic | 35.0% | |
| CTTGAGAAGAGTTCATAAAG+AGG | - | chr4_2:67861872-67861891 | Msa0617410:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr4_2:67861919-67861938 | None:intergenic | 35.0% | |
| ATCTTGATTTCTTGTGACAC+AGG | - | chr4_2:67861979-67861998 | Msa0617410:intron | 35.0% | |
| CTTACCTGCAATAAACAAGT+AGG | + | chr4_2:67862114-67862133 | None:intergenic | 35.0% | |
| ! | GTGGTGTCAAACATTAGAAA+AGG | - | chr4_2:67862268-67862287 | Msa0617410:CDS | 35.0% |
| TAATTTCATGTCATCTGCCA+TGG | - | chr4_2:67862338-67862357 | Msa0617410:CDS | 35.0% | |
| AATTTCATGTCATCTGCCAT+GGG | - | chr4_2:67862339-67862358 | Msa0617410:CDS | 35.0% | |
| !! | CTCTAAAATTATAAAGGGGC+AGG | + | chr4_2:67862381-67862400 | None:intergenic | 35.0% |
| TATATATGAGTATCAGGTCG+AGG | - | chr4_2:67862550-67862569 | Msa0617410:CDS | 35.0% | |
| ATTCTATTGTGGTCTCTGTA+TGG | + | chr4_2:67862687-67862706 | None:intergenic | 35.0% | |
| GAATGAACAGAACTGATAGA+AGG | + | chr4_2:67862756-67862775 | None:intergenic | 35.0% | |
| TCTGTTCATTCTTCTTGATG+TGG | - | chr4_2:67862765-67862784 | Msa0617410:intron | 35.0% | |
| TTACGTTTGAATCAGGAGAA+AGG | - | chr4_2:67862821-67862840 | Msa0617410:intron | 35.0% | |
| TAGGTTCTTTACTATATGGG+TGG | - | chr4_2:67862993-67863012 | Msa0617410:intron | 35.0% | |
| ! | GGTTGTTTAAGTTATCTGTC+AGG | - | chr4_2:67863045-67863064 | Msa0617410:intron | 35.0% |
| TTATTTGATTAAGAGGAGGG+GGG | - | chr4_2:67863208-67863227 | Msa0617410:intron | 35.0% | |
| ! | AATTGAGTCAGGAGAGATTT+TGG | - | chr4_2:67863341-67863360 | Msa0617410:intron | 35.0% |
| ! | ATAGTAATGGAGAGGGAAAA+TGG | + | chr4_2:67863383-67863402 | None:intergenic | 35.0% |
| !! | CACAATTATGCAAGTTTTGG+TGG | + | chr4_2:67863452-67863471 | None:intergenic | 35.0% |
| ! | AGAGGATCTTAACTTGATCT+TGG | - | chr4_2:67863509-67863528 | Msa0617410:intron | 35.0% |
| GAGAAAAAATGAAAAGAGGG+GGG | + | chr4_2:67863536-67863555 | None:intergenic | 35.0% | |
| !! | GTTTAGGTTTTTGCTAGTAC+CGG | - | chr4_2:67863646-67863665 | Msa0617410:intron | 35.0% |
| !!! | ATTACTTCTTTTCAGGTCCA+AGG | - | chr4_2:67864003-67864022 | Msa0617410:five_prime_UTR | 35.0% |
| AATTTGCCTCTGTATTGTTG+CGG | - | chr4_2:67864160-67864179 | Msa0617410:intron | 35.0% | |
| !! | TTGCGGGTTTGTTACAAATT+GGG | - | chr4_2:67864177-67864196 | Msa0617410:five_prime_UTR | 35.0% |
| GTTGTATTTGAACCATTTGC+AGG | + | chr4_2:67864238-67864257 | None:intergenic | 35.0% | |
| ! | AGGAGTATACCTCAGATGAA+CGG | + | chr4_2:67857613-67857632 | None:intergenic | 40.0% |
| GGGATGAAAATATCTGGTGA+AGG | + | chr4_2:67857786-67857805 | None:intergenic | 40.0% | |
| TAGGAGATTAAGGAGATAGC+GGG | + | chr4_2:67857907-67857926 | None:intergenic | 40.0% | |
| TCTTGCATCTGGTTGCTAAT+AGG | + | chr4_2:67857926-67857945 | None:intergenic | 40.0% | |
| CAAGAGGAGTAAACTCAGTT+TGG | + | chr4_2:67857977-67857996 | None:intergenic | 40.0% | |
| CAAACTGAGTTTACTCCTCT+TGG | - | chr4_2:67857975-67857994 | Msa0617410:intron | 40.0% | |
| GTTGTTTACGAAGTTACTCC+AGG | - | chr4_2:67858014-67858033 | Msa0617410:intron | 40.0% | |
| TTTACGAAGTTACTCCAGGT+AGG | - | chr4_2:67858018-67858037 | Msa0617410:intron | 40.0% | |
| TAATGGCTAGAAAACCTACC+TGG | + | chr4_2:67858035-67858054 | None:intergenic | 40.0% | |
| GATAGTTGGTTACTATTGGG+GGG | - | chr4_2:67858340-67858359 | Msa0617410:intron | 40.0% | |
| GAAGATGCTGTAAGACTCTA+AGG | - | chr4_2:67858592-67858611 | Msa0617410:intron | 40.0% | |
| ! | AATACTTCTGGCTGGGTTAA+AGG | - | chr4_2:67858943-67858962 | Msa0617410:intron | 40.0% |
| CACATAAACTACTGCTTTCC+TGG | - | chr4_2:67859031-67859050 | Msa0617410:intron | 40.0% | |
| ! | TTGTCTTGCATTTCAGGTGT+TGG | - | chr4_2:67859096-67859115 | Msa0617410:intron | 40.0% |
| CCCACACATGTTGTTAAGAT+AGG | - | chr4_2:67859156-67859175 | Msa0617410:intron | 40.0% | |
| GCCTATCTTAACAACATGTG+TGG | + | chr4_2:67859160-67859179 | None:intergenic | 40.0% | |
| ! | TCTAACCAGAATTTTCCAGC+AGG | + | chr4_2:67859216-67859235 | None:intergenic | 40.0% |
| ! | GCTGGAAAATTCTGGTTAGA+TGG | - | chr4_2:67859216-67859235 | Msa0617410:intron | 40.0% |
| ! | GATGGTAACGCGTAAGATTT+GGG | + | chr4_2:67859301-67859320 | None:intergenic | 40.0% |
| ! | AGATGGTAACGCGTAAGATT+TGG | + | chr4_2:67859302-67859321 | None:intergenic | 40.0% |
| ! | TCCTTTTGAACAAACTCCCT+GGG | + | chr4_2:67859398-67859417 | None:intergenic | 40.0% |
| TTCAGATATGTCATCGGACA+AGG | - | chr4_2:67859478-67859497 | Msa0617410:intron | 40.0% | |
| ATAAGGACAGTGAGATGTCA+AGG | + | chr4_2:67859516-67859535 | None:intergenic | 40.0% | |
| CTTGCAATGGGAACTTGATA+AGG | + | chr4_2:67859533-67859552 | None:intergenic | 40.0% | |
| TTCGAGTGATAAGGCTGTTT+AGG | + | chr4_2:67859684-67859703 | None:intergenic | 40.0% | |
| ! | CACACAACTTTCGAGTGATA+AGG | + | chr4_2:67859693-67859712 | None:intergenic | 40.0% |
| TGAGCTACCCTTTATATGCT+TGG | - | chr4_2:67859761-67859780 | Msa0617410:CDS | 40.0% | |
| CCGTAGAATATTTCAGAGCT+TGG | + | chr4_2:67859972-67859991 | None:intergenic | 40.0% | |
| AGCCAACAATACTAGCATTC+AGG | + | chr4_2:67859995-67860014 | None:intergenic | 40.0% | |
| GATCCAAAACAGAACACCTA+TGG | - | chr4_2:67860157-67860176 | Msa0617410:intron | 40.0% | |
| ! | AACCCATAGGTGTTCTGTTT+TGG | + | chr4_2:67860163-67860182 | None:intergenic | 40.0% |
| AATACCTTCATCAGCTTGAG+GGG | + | chr4_2:67860393-67860412 | None:intergenic | 40.0% | |
| CTTGCTGATGTACTTACCAA+AGG | + | chr4_2:67860465-67860484 | None:intergenic | 40.0% | |
| TTGACCCTGTGTGTTTACAT+AGG | - | chr4_2:67860485-67860504 | Msa0617410:intron | 40.0% | |
| TGACCCTGTGTGTTTACATA+GGG | - | chr4_2:67860486-67860505 | Msa0617410:intron | 40.0% | |
| ACTCCCTATGTAAACACACA+GGG | + | chr4_2:67860492-67860511 | None:intergenic | 40.0% | |
| TACTCCCTATGTAAACACAC+AGG | + | chr4_2:67860493-67860512 | None:intergenic | 40.0% | |
| AGAAAACTTGGAAAGTGGAC+TGG | + | chr4_2:67860520-67860539 | None:intergenic | 40.0% | |
| GATTGGAAGATCACATAGGA+TGG | + | chr4_2:67860648-67860667 | None:intergenic | 40.0% | |
| TTAGCCAAAGTAGTCCACAT+AGG | - | chr4_2:67860682-67860701 | Msa0617410:intron | 40.0% | |
| ! | AATGCCTATGTGGACTACTT+TGG | + | chr4_2:67860689-67860708 | None:intergenic | 40.0% |
| ! | GTTGAAGACCCTCTATTTTG+TGG | - | chr4_2:67861002-67861021 | Msa0617410:intron | 40.0% |
| GCACGAAAACCACAAAATAG+AGG | + | chr4_2:67861014-67861033 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr4_2:67861122-67861141 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr4_2:67861153-67861172 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr4_2:67861154-67861173 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr4_2:67861198-67861217 | None:intergenic | 40.0% | |
| TTAGAATCCAAATGTCGGAG+GGG | + | chr4_2:67861243-67861262 | None:intergenic | 40.0% | |
| CATTAGAATCCAAATGTCGG+AGG | + | chr4_2:67861245-67861264 | None:intergenic | 40.0% | |
| TCAAACTCTCGGTATCATTG+AGG | - | chr4_2:67861299-67861318 | Msa0617410:intron | 40.0% | |
| GGCACACAAAAAACACCAAA+AGG | - | chr4_2:67861320-67861339 | Msa0617410:intron | 40.0% | |
| !! | GTGTGATCGGCTTTAAAGAT+TGG | + | chr4_2:67861660-67861679 | None:intergenic | 40.0% |
| TGGAAATTCCGCCTTAATTG+CGG | - | chr4_2:67861733-67861752 | Msa0617410:CDS | 40.0% | |
| CTAACCAAAGGTCGCAATTT+AGG | + | chr4_2:67861773-67861792 | None:intergenic | 40.0% | |
| TTGCAATGAAGGCTAACCAA+AGG | + | chr4_2:67861785-67861804 | None:intergenic | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr4_2:67861815-67861834 | Msa0617410:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr4_2:67861816-67861835 | Msa0617410:intron | 40.0% |
| GAGTGTTATCTATCCGATGT+GGG | + | chr4_2:67861853-67861872 | None:intergenic | 40.0% | |
| ! | AGAGTGTTATCTATCCGATG+TGG | + | chr4_2:67861854-67861873 | None:intergenic | 40.0% |
| GAGAAGAGTTCATAAAGAGG+AGG | - | chr4_2:67861875-67861894 | Msa0617410:intron | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr4_2:67861917-67861936 | Msa0617410:intron | 40.0% |
| TTGTGACACAGGAATTGTGA+GGG | - | chr4_2:67861990-67862009 | Msa0617410:intron | 40.0% | |
| TTCAGAGAAACAAATGGCAC+AGG | + | chr4_2:67862054-67862073 | None:intergenic | 40.0% | |
| AAAAGTCAACCTCTTGCTAC+AGG | - | chr4_2:67862074-67862093 | Msa0617410:intron | 40.0% | |
| AAAGTCAACCTCTTGCTACA+GGG | - | chr4_2:67862075-67862094 | Msa0617410:intron | 40.0% | |
| ! | TGTTTGGGGTTTGTGTTAGA+AGG | - | chr4_2:67862502-67862521 | Msa0617410:CDS | 40.0% |
| GAGGAAACAAAGACATCTCA+AGG | + | chr4_2:67862614-67862633 | None:intergenic | 40.0% | |
| AATCTTTGGGCTTAGAGAAG+AGG | + | chr4_2:67862633-67862652 | None:intergenic | 40.0% | |
| TGGTCAAGGCTATTCTATTG+TGG | + | chr4_2:67862698-67862717 | None:intergenic | 40.0% | |
| AAATTAAGTGAACGGCGTAG+TGG | + | chr4_2:67862721-67862740 | None:intergenic | 40.0% | |
| ACTACGCCGTTCACTTAATT+TGG | - | chr4_2:67862720-67862739 | Msa0617410:intron | 40.0% | |
| CTACGCCGTTCACTTAATTT+GGG | - | chr4_2:67862721-67862740 | Msa0617410:intron | 40.0% | |
| GAGTGCCCAAATTAAGTGAA+CGG | + | chr4_2:67862729-67862748 | None:intergenic | 40.0% | |
| GAAAGGTCTGACTATGTTAG+AGG | - | chr4_2:67862838-67862857 | Msa0617410:CDS | 40.0% | |
| AGATTCTGATGAAGGTTGCT+AGG | - | chr4_2:67862974-67862993 | Msa0617410:CDS | 40.0% | |
| TATTTGATTAAGAGGAGGGG+GGG | - | chr4_2:67863209-67863228 | Msa0617410:intron | 40.0% | |
| !! | AGGAGAGATTTTGGTGAGTT+AGG | - | chr4_2:67863350-67863369 | Msa0617410:intron | 40.0% |
| AATGGAGAGGGAAAATGGAA+AGG | + | chr4_2:67863378-67863397 | None:intergenic | 40.0% | |
| AATATGTCCTGCATAGGGTA+TGG | + | chr4_2:67863561-67863580 | None:intergenic | 40.0% | |
| AAGAATAGACGTGCAACTCA+AGG | + | chr4_2:67863762-67863781 | None:intergenic | 40.0% | |
| ATCCAAGTAGGGAAAGGTAA+TGG | - | chr4_2:67863911-67863930 | Msa0617410:CDS | 40.0% | |
| AACCATTACCTTTCCCTACT+TGG | + | chr4_2:67863916-67863935 | None:intergenic | 40.0% | |
| ATTTGCCTCTGTATTGTTGC+GGG | - | chr4_2:67864161-67864180 | Msa0617410:intron | 40.0% | |
| !! | GTTGCGGGTTTGTTACAAAT+TGG | - | chr4_2:67864176-67864195 | Msa0617410:five_prime_UTR | 40.0% |
| TCAGATGAACGGTGATGAGA+CGG | + | chr4_2:67857602-67857621 | None:intergenic | 45.0% | |
| ACAGACAGAGAGACAGCAAT+GGG | - | chr4_2:67857753-67857772 | Msa0617410:intron | 45.0% | |
| CAGCTTGTGACCATTCATCT+GGG | + | chr4_2:67857806-67857825 | None:intergenic | 45.0% | |
| !! | AGGCGTTGAACTGGATACAA+TGG | + | chr4_2:67857835-67857854 | None:intergenic | 45.0% |
| !! | GTTGATTTGCCAACACTTCC+AGG | + | chr4_2:67857879-67857898 | None:intergenic | 45.0% |
| GCTTATCTTGATACCGACGT+TGG | - | chr4_2:67857951-67857970 | Msa0617410:intron | 45.0% | |
| AAACTCAGTTTGGCCAACGT+CGG | + | chr4_2:67857967-67857986 | None:intergenic | 45.0% | |
| !! | ACTATTGGGGGGTGTGTTTT+TGG | - | chr4_2:67858351-67858370 | Msa0617410:intron | 45.0% |
| TGGTTAGATGGGGAAGATGA+TGG | - | chr4_2:67859228-67859247 | Msa0617410:intron | 45.0% | |
| ! | CCTTTTGAACAAACTCCCTG+GGG | + | chr4_2:67859397-67859416 | None:intergenic | 45.0% |
| ! | CTCCTTTTGAACAAACTCCC+TGG | + | chr4_2:67859399-67859418 | None:intergenic | 45.0% |
| ! | CAGGGAGTTTGTTCAAAAGG+AGG | - | chr4_2:67859397-67859416 | Msa0617410:intron | 45.0% |
| GATTCGACATGTTCATCGTG+AGG | - | chr4_2:67859559-67859578 | Msa0617410:intron | 45.0% | |
| CTTTCCTAAGTTCTCCACAG+CGG | - | chr4_2:67859727-67859746 | Msa0617410:CDS | 45.0% | |
| GGCCTGAATGCTAGTATTGT+TGG | - | chr4_2:67859990-67860009 | Msa0617410:intron | 45.0% | |
| ! | GCAGTTGAATCTGAAGTACC+TGG | - | chr4_2:67860017-67860036 | Msa0617410:intron | 45.0% |
| AAGTACCTGGAGATTTACCC+TGG | - | chr4_2:67860030-67860049 | Msa0617410:intron | 45.0% | |
| CAAGTTACCTACCAAGACCA+AGG | + | chr4_2:67860058-67860077 | None:intergenic | 45.0% | |
| ATACCTTCATCAGCTTGAGG+GGG | + | chr4_2:67860392-67860411 | None:intergenic | 45.0% | |
| TTCCAGAACATGGTACTGCT+TGG | - | chr4_2:67860438-67860457 | Msa0617410:intron | 45.0% | |
| TTTGTTCTGTGACGCTGCAT+TGG | - | chr4_2:67860570-67860589 | Msa0617410:intron | 45.0% | |
| ! | CACATAGGCATTTTGTGCTG+CGG | - | chr4_2:67860697-67860716 | Msa0617410:intron | 45.0% |
| ! | TTGTGGTTTTCGTGCCTAGA+AGG | - | chr4_2:67861019-67861038 | Msa0617410:intron | 45.0% |
| GCGTACAATACACCAAATGG+TGG | + | chr4_2:67861123-67861142 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr4_2:67861126-67861145 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_2:67861158-67861177 | Msa0617410:intron | 45.0% |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr4_2:67861191-67861210 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr4_2:67861192-67861211 | None:intergenic | 45.0% | |
| ! | AAGGCATCACTACCTTTGCA+AGG | - | chr4_2:67861576-67861595 | Msa0617410:intron | 45.0% |
| GGACGTTTGATACCTTGCAA+AGG | + | chr4_2:67861591-67861610 | None:intergenic | 45.0% | |
| GGCTGTATGATCTGTGTGAT+CGG | + | chr4_2:67861673-67861692 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr4_2:67861808-67861827 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr4_2:67861806-67861825 | Msa0617410:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | chr4_2:67861811-67861830 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | + | chr4_2:67861817-67861836 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr4_2:67861814-67861833 | Msa0617410:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr4_2:67861817-67861836 | Msa0617410:intron | 45.0% |
| !! | CAAAACCGGCTTGTAAGGTT+AGG | + | chr4_2:67861905-67861924 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_2:67861910-67861929 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_2:67861907-67861926 | Msa0617410:intron | 45.0% |
| CTTGTGACACAGGAATTGTG+AGG | - | chr4_2:67861989-67862008 | Msa0617410:intron | 45.0% | |
| TGTGACACAGGAATTGTGAG+GGG | - | chr4_2:67861991-67862010 | Msa0617410:intron | 45.0% | |
| !! | AATTGTGAGGGGCATTGACA+CGG | - | chr4_2:67862002-67862021 | Msa0617410:intron | 45.0% |
| TTTAGCTAGTAGAGAAGGGC+TGG | - | chr4_2:67862891-67862910 | Msa0617410:CDS | 45.0% | |
| CTTAAGATGAACGAACGACC+AGG | + | chr4_2:67862956-67862975 | None:intergenic | 45.0% | |
| GTAATAAGGAAGGGGAGTCT+TGG | - | chr4_2:67863110-67863129 | Msa0617410:intron | 45.0% | |
| !!! | CCTGACTCAATTTTGACTCG+AGG | + | chr4_2:67863333-67863352 | None:intergenic | 45.0% |
| CCTCGAGTCAAAATTGAGTC+AGG | - | chr4_2:67863330-67863349 | Msa0617410:intron | 45.0% | |
| TTCTCAACCATACCCTATGC+AGG | - | chr4_2:67863551-67863570 | Msa0617410:intron | 45.0% | |
| ! | AGGTTTAGGGTAACAGACGA+AGG | + | chr4_2:67863790-67863809 | None:intergenic | 45.0% |
| TGTAAGGTGATAAGCGTCCT+TGG | + | chr4_2:67864023-67864042 | None:intergenic | 45.0% | |
| TTCATGGAAGCAGTAGCACA+TGG | - | chr4_2:67864082-67864101 | Msa0617410:intron | 45.0% | |
| ACAAACCCGCAACAATACAG+AGG | + | chr4_2:67864169-67864188 | None:intergenic | 45.0% | |
| !!! | AATTTTTATCTTTTTATTTT+TGG | + | chr4_2:67860930-67860949 | None:intergenic | 5.0% |
| GTCTCATCACCGTTCATCTG+AGG | - | chr4_2:67857601-67857620 | Msa0617410:three_prime_UTR | 50.0% | |
| GACAGACAGAGAGACAGCAA+TGG | - | chr4_2:67857752-67857771 | Msa0617410:intron | 50.0% | |
| GCAGCTTGTGACCATTCATC+TGG | + | chr4_2:67857807-67857826 | None:intergenic | 50.0% | |
| AGGTCCACAAACGAGTACGA+CGG | + | chr4_2:67857859-67857878 | None:intergenic | 50.0% | |
| ! | GTTTGTGGACCTGGAAGTGT+TGG | - | chr4_2:67857867-67857886 | Msa0617410:intron | 50.0% |
| !! | ATTAAGGAGATAGCGGGCGA+AGG | + | chr4_2:67857901-67857920 | None:intergenic | 50.0% |
| ATGGAAGACTTCAGAGCGAG+GGG | + | chr4_2:67858479-67858498 | None:intergenic | 50.0% | |
| GATGGAAGACTTCAGAGCGA+GGG | + | chr4_2:67858480-67858499 | None:intergenic | 50.0% | |
| CGCGTAAGATTTGGGCTTAC+CGG | + | chr4_2:67859293-67859312 | None:intergenic | 50.0% | |
| ! | CCCCAGGGAGTTTGTTCAAA+AGG | - | chr4_2:67859394-67859413 | Msa0617410:intron | 50.0% |
| CGACATGTTCATCGTGAGGT+TGG | - | chr4_2:67859563-67859582 | Msa0617410:intron | 50.0% | |
| CGCTGTGGAGAACTTAGGAA+AGG | + | chr4_2:67859729-67859748 | None:intergenic | 50.0% | |
| CGCAGCACAAAATGCCTATG+TGG | + | chr4_2:67860699-67860718 | None:intergenic | 50.0% | |
| ! | TAGGCATTTTGTGCTGCGGT+AGG | - | chr4_2:67860701-67860720 | Msa0617410:intron | 50.0% |
| GGTAGGTGCCCATGAATAGT+CGG | - | chr4_2:67860718-67860737 | Msa0617410:intron | 50.0% | |
| !! | CGCGTGTACCGACTATTCAT+GGG | + | chr4_2:67860729-67860748 | None:intergenic | 50.0% |
| !! | TCGCGTGTACCGACTATTCA+TGG | + | chr4_2:67860730-67860749 | None:intergenic | 50.0% |
| AGTTCGCAACACTACTGCCA+CGG | + | chr4_2:67860981-67861000 | None:intergenic | 50.0% | |
| AGGATTCCTTACGCATGGTC+TGG | - | chr4_2:67861088-67861107 | Msa0617410:intron | 50.0% | |
| GGATTCCTTACGCATGGTCT+GGG | - | chr4_2:67861089-67861108 | Msa0617410:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_2:67861214-67861233 | Msa0617410:intron | 50.0% | |
| AAATGTCGGAGGGGTAACCT+TGG | + | chr4_2:67861234-67861253 | None:intergenic | 50.0% | |
| AAGGTTACCCCTCCGACATT+TGG | - | chr4_2:67861233-67861252 | Msa0617410:intron | 50.0% | |
| GTCGCAATTTAGGCGACTAG+GGG | + | chr4_2:67861763-67861782 | None:intergenic | 50.0% | |
| GGTCGCAATTTAGGCGACTA+GGG | + | chr4_2:67861764-67861783 | None:intergenic | 50.0% | |
| AGGTCGCAATTTAGGCGACT+AGG | + | chr4_2:67861765-67861784 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGCGACCTT+TGG | - | chr4_2:67861766-67861785 | Msa0617410:CDS | 50.0% | |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | + | chr4_2:67861796-67861815 | None:intergenic | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr4_2:67861837-67861856 | Msa0617410:intron | 50.0% |
| GCACTCCTAACCTTACAAGC+CGG | - | chr4_2:67861897-67861916 | Msa0617410:intron | 50.0% | |
| GGATATCACCCTGTAGCAAG+AGG | + | chr4_2:67862086-67862105 | None:intergenic | 50.0% | |
| ATCTGCCATGGGTCTGTTGT+TGG | - | chr4_2:67862350-67862369 | Msa0617410:CDS | 50.0% | |
| TCTGCCATGGGTCTGTTGTT+GGG | - | chr4_2:67862351-67862370 | Msa0617410:CDS | 50.0% | |
| TAGTCCCAACAACAGACCCA+TGG | + | chr4_2:67862358-67862377 | None:intergenic | 50.0% | |
| GGGGTTTGTGTTAGAAGGAG+TGG | - | chr4_2:67862507-67862526 | Msa0617410:CDS | 50.0% | |
| TTAAGTGAACGGCGTAGTGG+TGG | + | chr4_2:67862718-67862737 | None:intergenic | 50.0% | |
| ! | ATGTGAGAGGCTAGTTGCTC+CGG | - | chr4_2:67862916-67862935 | Msa0617410:CDS | 50.0% |
| ATAAGGAAGGGGAGTCTTGG+AGG | - | chr4_2:67863113-67863132 | Msa0617410:intron | 50.0% | |
| ACACTAATGACGGCGAGGCT+AGG | + | chr4_2:67857527-67857546 | None:intergenic | 55.0% | |
| GCGGTGAGGGACACTAATGA+CGG | + | chr4_2:67857537-67857556 | None:intergenic | 55.0% | |
| ATGAGGGAAGCTGTAGGCAG+CGG | + | chr4_2:67857567-67857586 | None:intergenic | 55.0% | |
| GGTCCACAAACGAGTACGAC+GGG | + | chr4_2:67857858-67857877 | None:intergenic | 55.0% | |
| GTCGTACTCGTTTGTGGACC+TGG | - | chr4_2:67857858-67857877 | Msa0617410:intron | 55.0% | |
| GGATGGAAGACTTCAGAGCG+AGG | + | chr4_2:67858481-67858500 | None:intergenic | 55.0% | |
| GACTCCGCTGTGGAGAACTT+AGG | + | chr4_2:67859734-67859753 | None:intergenic | 55.0% | |
| TCAGTCACAAGACTCCGCTG+TGG | + | chr4_2:67859744-67859763 | None:intergenic | 55.0% | |
| AGGCACCAGGGTAAATCTCC+AGG | + | chr4_2:67860038-67860057 | None:intergenic | 55.0% | |
| GGAGATTTACCCTGGTGCCT+TGG | - | chr4_2:67860038-67860057 | Msa0617410:intron | 55.0% | |
| TTACCCTGGTGCCTTGGTCT+TGG | - | chr4_2:67860044-67860063 | Msa0617410:intron | 55.0% | |
| ! | CTACCAAGACCAAGGCACCA+GGG | + | chr4_2:67860050-67860069 | None:intergenic | 55.0% |
| GGCCAAGCAGTACCATGTTC+TGG | + | chr4_2:67860443-67860462 | None:intergenic | 55.0% | |
| CATGGTACTGCTTGGCCCTT+TGG | - | chr4_2:67860446-67860465 | Msa0617410:intron | 55.0% | |
| !! | CGAGGCATTGGAAGCCTTCT+AGG | + | chr4_2:67861036-67861055 | None:intergenic | 55.0% |
| TCCTTACGCATGGTCTGGGA+AGG | - | chr4_2:67861093-67861112 | Msa0617410:intron | 55.0% | |
| CCTTACGCATGGTCTGGGAA+GGG | - | chr4_2:67861094-67861113 | Msa0617410:intron | 55.0% | |
| CTTACGCATGGTCTGGGAAG+GGG | - | chr4_2:67861095-67861114 | Msa0617410:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr4_2:67861179-67861198 | None:intergenic | 55.0% | |
| CTAGGGGCAGACCGCAATTA+AGG | + | chr4_2:67861747-67861766 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr4_2:67861820-67861839 | Msa0617410:intron | 55.0% |
| !! | AGGGGCATTGACACGGTCAA+AGG | - | chr4_2:67862009-67862028 | Msa0617410:intron | 55.0% |
| !! | AGAAGGGCTGGCTATGTGAG+AGG | - | chr4_2:67862903-67862922 | Msa0617410:CDS | 55.0% |
| CCAGGACAGCTCTGTTCAAC+CGG | + | chr4_2:67862938-67862957 | None:intergenic | 55.0% | |
| AGGAGGGGGGGTTGAGTAAA+GGG | - | chr4_2:67863221-67863240 | Msa0617410:intron | 55.0% | |
| GAGGGACACTAATGACGGCG+AGG | + | chr4_2:67857532-67857551 | None:intergenic | 60.0% | |
| AGCTGTAGGCAGCGGAGCAA+CGG | + | chr4_2:67857559-67857578 | None:intergenic | 60.0% | |
| GCAGCGATGAGGGAAGCTGT+AGG | + | chr4_2:67857573-67857592 | None:intergenic | 60.0% | |
| !! | TACGACGGGAGGCGTTGAAC+TGG | + | chr4_2:67857844-67857863 | None:intergenic | 60.0% |
| CCACAAACGAGTACGACGGG+AGG | + | chr4_2:67857855-67857874 | None:intergenic | 60.0% | |
| CCTCCCGTCGTACTCGTTTG+TGG | - | chr4_2:67857852-67857871 | Msa0617410:intron | 60.0% | |
| ! | CCTACCAAGACCAAGGCACC+AGG | + | chr4_2:67860051-67860070 | None:intergenic | 60.0% |
| !! | CCTGGTGCCTTGGTCTTGGT+AGG | - | chr4_2:67860048-67860067 | Msa0617410:intron | 60.0% |
| GCTCCCCCTCAAGCTGATGA+AGG | - | chr4_2:67860386-67860405 | Msa0617410:intron | 60.0% | |
| TCGGTACACGCGAGAGCCTA+AGG | - | chr4_2:67860737-67860756 | Msa0617410:intron | 60.0% | |
| CCCTTCCCAGACCATGCGTA+AGG | + | chr4_2:67861097-67861116 | None:intergenic | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | - | chr4_2:67861108-67861127 | Msa0617410:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_2:67861225-67861244 | None:intergenic | 60.0% | |
| GGGGCAGACCGCAATTAAGG+CGG | + | chr4_2:67861744-67861763 | None:intergenic | 60.0% | |
| GAACGGCGTAGTGGTGGTCA+AGG | + | chr4_2:67862712-67862731 | None:intergenic | 60.0% | |
| CCGGTTGAACAGAGCTGTCC+TGG | - | chr4_2:67862935-67862954 | Msa0617410:CDS | 60.0% | |
| GAGGAGGGGGGGTTGAGTAA+AGG | - | chr4_2:67863220-67863239 | Msa0617410:intron | 60.0% | |
| GGAGGGGGGGTTGAGTAAAG+GGG | - | chr4_2:67863222-67863241 | Msa0617410:intron | 60.0% | |
| TGTAGGCAGCGGAGCAACGG+CGG | + | chr4_2:67857556-67857575 | None:intergenic | 65.0% | |
| AACGGTGATGAGACGGCGCG+CGG | + | chr4_2:67857595-67857614 | None:intergenic | 65.0% | |
| AAGGAGGCTCGTCTCCTGCG+TGG | - | chr4_2:67859413-67859432 | Msa0617410:intron | 65.0% | |
| CTCGTCTCCTGCGTGGCGAA+CGG | - | chr4_2:67859420-67859439 | Msa0617410:intron | 65.0% | |
| CCACTATCCGTTCGCCACGC+AGG | + | chr4_2:67859430-67859449 | None:intergenic | 65.0% | |
| CCTGCGTGGCGAACGGATAG+TGG | - | chr4_2:67859427-67859446 | Msa0617410:intron | 65.0% | |
| CAGCGGAGCAACGGCGGTGA+GGG | + | chr4_2:67857550-67857569 | None:intergenic | 70.0% | |
| GCAGCGGAGCAACGGCGGTG+AGG | + | chr4_2:67857551-67857570 | None:intergenic | 75.0% | |
| ACGGCGCGCGGCAGCGATGA+GGG | + | chr4_2:67857583-67857602 | None:intergenic | 75.0% | |
| ! | GACGGCGCGCGGCAGCGATG+AGG | + | chr4_2:67857584-67857603 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 67857491 | 67864297 | 67857491 | ID=Msa0617410;Name=Msa0617410 |
| chr4_2 | mRNA | 67857491 | 67864297 | 67857491 | ID=Msa0617410-mRNA-1;Parent=Msa0617410;Name=Msa0617410-mRNA-1;_AED=0.07;_eAED=0.07;_QI=183|0.88|0.8|1|0.55|0.6|10|226|355 |
| chr4_2 | exon | 67857491 | 67857770 | 67857491 | ID=Msa0617410-mRNA-1:exon:19450;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67859660 | 67859787 | 67859660 | ID=Msa0617410-mRNA-1:exon:19449;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67861723 | 67861822 | 67861723 | ID=Msa0617410-mRNA-1:exon:19448;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67862208 | 67862388 | 67862208 | ID=Msa0617410-mRNA-1:exon:19447;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67862496 | 67862676 | 67862496 | ID=Msa0617410-mRNA-1:exon:19446;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67862824 | 67862993 | 67862824 | ID=Msa0617410-mRNA-1:exon:19445;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67863616 | 67863649 | 67863616 | ID=Msa0617410-mRNA-1:exon:19444;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67863753 | 67863943 | 67863753 | ID=Msa0617410-mRNA-1:exon:19443;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67863952 | 67864031 | 67863952 | ID=Msa0617410-mRNA-1:exon:19442;Parent=Msa0617410-mRNA-1 |
| chr4_2 | exon | 67864166 | 67864297 | 67864166 | ID=Msa0617410-mRNA-1:exon:19441;Parent=Msa0617410-mRNA-1 |
| chr4_2 | five_prime_UTR | 67864166 | 67864297 | 67864166 | ID=Msa0617410-mRNA-1:five_prime_utr;Parent=Msa0617410-mRNA-1 |
| chr4_2 | five_prime_UTR | 67863981 | 67864031 | 67863981 | ID=Msa0617410-mRNA-1:five_prime_utr;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67863952 | 67863980 | 67863952 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67863753 | 67863943 | 67863753 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67863616 | 67863649 | 67863616 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67862824 | 67862993 | 67862824 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67862496 | 67862676 | 67862496 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67862208 | 67862388 | 67862208 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67861723 | 67861822 | 67861723 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67859660 | 67859787 | 67859660 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | CDS | 67857717 | 67857770 | 67857717 | ID=Msa0617410-mRNA-1:cds;Parent=Msa0617410-mRNA-1 |
| chr4_2 | three_prime_UTR | 67857491 | 67857716 | 67857491 | ID=Msa0617410-mRNA-1:three_prime_utr;Parent=Msa0617410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
