AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0048000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0048000 MtrunA17_Chr2g0322591 84.080 402 4 2 1 342 1 402 0.0 673
Msa0048000 MtrunA17_Chr4g0024631 66.339 407 72 4 1 342 1 407 0.0 550
Msa0048000 MtrunA17_Chr3g0115251 50.769 390 126 7 15 342 9 394 3.04e-133 385
Msa0048000 MtrunA17_Chr4g0004991 56.679 277 59 3 127 342 18 294 1.78e-107 316
Msa0048000 MtrunA17_Chr4g0017871 50.847 236 68 2 153 340 12 247 8.13e-88 264
Msa0048000 MtrunA17_Chr5g0396961 36.466 266 101 7 88 292 74 332 5.26e-43 152
Msa0048000 MtrunA17_Chr3g0126221 36.538 260 97 7 94 292 80 332 2.46e-41 147
Msa0048000 MtrunA17_Chr1g0149521 33.080 263 107 6 90 292 83 336 5.91e-33 125
Msa0048000 MtrunA17_Chr8g0360581 25.954 262 124 9 128 329 77 328 6.49e-18 83.6
Msa0048000 MtrunA17_Chr2g0316241 26.255 259 119 9 131 328 74 321 7.86e-18 83.2
Msa0048000 MtrunA17_Chr4g0017861 37.681 138 73 4 16 152 17 142 1.32e-16 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0048000 AT1G05170.2 62.899 407 86 4 1 342 1 407 0.0 522
Msa0048000 AT2G32430.1 61.369 409 91 6 1 342 1 409 7.49e-173 486
Msa0048000 AT4G26940.1 59.747 395 92 5 12 342 16 407 8.87e-166 468
Msa0048000 AT1G05170.1 59.831 356 79 3 1 292 1 356 9.52e-152 431
Msa0048000 AT1G11730.1 50.493 406 113 8 1 341 1 383 6.17e-134 387
Msa0048000 AT1G32930.1 48.724 392 135 6 13 342 12 399 2.46e-126 368
Msa0048000 AT1G77810.2 48.477 394 122 9 10 339 5 381 2.40e-123 360
Msa0048000 AT1G77810.1 48.111 397 122 10 10 339 5 384 2.16e-121 355
Msa0048000 AT1G33430.1 47.074 393 136 11 16 342 7 393 2.51e-110 327
Msa0048000 AT1G33430.2 46.135 401 136 12 16 342 7 401 3.36e-107 319
Msa0048000 AT1G22015.1 43.257 393 150 8 15 342 11 395 1.39e-105 315
Msa0048000 AT4G26940.2 58.559 222 72 3 12 216 16 234 3.87e-81 249
Msa0048000 AT1G33430.3 42.857 308 105 10 16 258 7 308 1.28e-62 202
Msa0048000 AT5G53340.1 35.556 270 100 9 94 301 76 333 4.16e-45 157
Msa0048000 AT5G53340.2 36.293 259 95 8 94 290 76 326 5.24e-45 157
Msa0048000 AT4G32120.1 34.082 267 106 6 90 296 83 339 3.54e-36 134
Msa0048000 AT2G25300.2 33.208 265 103 7 90 292 6 258 3.00e-34 127
Msa0048000 AT2G25300.1 33.208 265 103 7 90 292 84 336 8.03e-34 127
Msa0048000 AT2G26100.1 29.457 258 112 9 131 328 107 354 4.09e-22 96.3

Find 89 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAAATTTGGTGTGATTT+TGG 0.176647 1_1:+81237502 None:intergenic
TCATTAGGAGCTTGGTTTAT+TGG 0.181423 1_1:-81234019 Msa0048000:CDS
AGACAAGACTATTTCAAATT+TGG 0.187361 1_1:-81235720 Msa0048000:CDS
ATTATCATCCGCTTTGTAAT+TGG 0.210456 1_1:-81235189 Msa0048000:CDS
CTTTCTGTGTCTGTCTTTGC+AGG 0.212494 1_1:+81237697 None:intergenic
ATCAGTAGTATTTATTTATT+AGG 0.229630 1_1:+81233010 None:intergenic
GAACCAGAATACTGGAAATT+TGG 0.236437 1_1:-81234242 Msa0048000:CDS
TCACCAAATTTCCAGTATTC+TGG 0.244223 1_1:+81234239 None:intergenic
TCTGTTCACTCTGATTCTTC+TGG 0.287945 1_1:-81237466 Msa0048000:five_prime_UTR
GTGCAGAAAAGAAGAAAATT+TGG 0.306097 1_1:+81237491 None:intergenic
TAACATATATAGTAATAAAA+TGG 0.313971 1_1:+81233055 None:intergenic
CATGTGTTGCTTCATTTGAT+TGG 0.320410 1_1:-81233489 Msa0048000:CDS
AATTATAATCTTCCTGAGTT+AGG 0.333642 1_1:+81233349 None:intergenic
TTTGTGGAGTGCTTCTTTCT+AGG 0.339012 1_1:-81233392 Msa0048000:exon
TTAAATGTAGCAATGAAATT+AGG 0.343261 1_1:-81233328 Msa0048000:three_prime_UTR
ATTTCCAGTATTCTGGTTCA+TGG 0.346108 1_1:+81234246 None:intergenic
GTTGTCCTCGCAAGTCCTTT+AGG 0.352932 1_1:+81236033 None:intergenic
GACTATTTCAAATTTGGAAA+TGG 0.359715 1_1:-81235714 Msa0048000:CDS
GCAAATGAGGATGTTTCATT+AGG 0.363722 1_1:-81234034 Msa0048000:CDS
CTCGCAAGTCCTTTAGGTTC+AGG 0.363890 1_1:+81236039 None:intergenic
ACAGAGTAAGTACTCTGTTT+TGG 0.365386 1_1:+81237541 None:intergenic
AGAAGGTACCTAATGGTTAT+AGG 0.369031 1_1:-81235602 Msa0048000:CDS
TTGTCTTTGCTGATAATTCA+AGG 0.373953 1_1:+81234762 None:intergenic
ATCTTCATATCTTCTGATAC+AGG 0.403107 1_1:+81235644 None:intergenic
ACATGGAGATTTCCTGAGAT+TGG 0.407780 1_1:-81234905 Msa0048000:intron
TGTGTCTGTCTTTGCAGGTA+AGG 0.408929 1_1:+81237702 None:intergenic
TGAGAAAAGAAAGAAGTTAG+AGG 0.413201 1_1:-81235223 Msa0048000:intron
TGTTAATTCCTATAACCATT+AGG 0.414080 1_1:+81235594 None:intergenic
TACTGGAAATTTGGTGAGAC+AGG 0.417346 1_1:-81234233 Msa0048000:CDS
TTATTTATTAGGAGCTTGAT+AGG 0.423650 1_1:+81233021 None:intergenic
GGACATGCAGTGGAATTTGT+AGG 0.432142 1_1:-81233468 Msa0048000:CDS
GTTAACAGCAGTAGCAAAGT+AGG 0.436177 1_1:+81234736 None:intergenic
CTGCCTCAATAGCTCGATCT+AGG 0.448168 1_1:+81234938 None:intergenic
AAAGAAGTTAGAGGAAGAGA+AGG 0.449533 1_1:-81235214 Msa0048000:intron
GTGTCTGTCTTTGCAGGTAA+GGG 0.450432 1_1:+81237703 None:intergenic
GGTACCATGAACCAGAATAC+TGG 0.454852 1_1:-81234250 Msa0048000:CDS
AGGATGTTTCATTAGGAGCT+TGG 0.461834 1_1:-81234027 Msa0048000:CDS
ATCCGCTTTGTAATTGGTCA+TGG 0.467305 1_1:-81235183 Msa0048000:CDS
AGATAAGTGAATCAACTGTT+AGG 0.471693 1_1:-81235625 Msa0048000:CDS
AGACTATGCTGTGGTACAAC+AGG 0.477338 1_1:-81233968 Msa0048000:intron
AAGTGATCATTACCAATCTC+AGG 0.483099 1_1:+81234893 None:intergenic
TGTATTGGAAGCTTCTGTGC+TGG 0.490184 1_1:-81237253 Msa0048000:CDS
AAAATTCTTGCAGAGGAGTA+AGG 0.491081 1_1:-81234271 Msa0048000:intron
TATAGAAAATGAAAATGAAA+AGG 0.494005 1_1:+81233287 None:intergenic
TAAAATTGCAGAAGGGTCCA+TGG 0.515054 1_1:+81233170 None:intergenic
ACCATGGTAGCTACTAGAAT+AGG 0.523561 1_1:-81233129 Msa0048000:three_prime_UTR
TGTTAGGAGAAGGTACCTAA+TGG 0.531626 1_1:-81235609 Msa0048000:CDS
CCAAAACCATGTTCAAAACA+TGG 0.532445 1_1:+81237413 None:intergenic
GAGAAGGTGAGAAAGCTTTG+TGG 0.536239 1_1:-81233408 Msa0048000:CDS
AAGTACTTTCGTCATGCGAC+AGG 0.539105 1_1:-81234206 Msa0048000:CDS
GCTACTAGAATAGGAAAGCA+TGG 0.541689 1_1:-81233120 Msa0048000:three_prime_UTR
TTCTCTAGTGCCACGACAGG+TGG 0.546041 1_1:-81234964 Msa0048000:intron
TCCATCATGCAGATTGTGAA+TGG 0.546325 1_1:-81233531 Msa0048000:intron
AAGTAAAAGGTGTTGTCCCA+TGG 0.548136 1_1:-81233187 Msa0048000:three_prime_UTR
TGGACTATTCCTGAACCTAA+AGG 0.548621 1_1:-81236048 Msa0048000:CDS
TCCGCTTTGTAATTGGTCAT+GGG 0.549475 1_1:-81235182 Msa0048000:intron
AAGAAGTTAGAGGAAGAGAA+GGG 0.551717 1_1:-81235213 Msa0048000:CDS
CTTCAAGTTCTTCCTAACTC+AGG 0.552458 1_1:-81233361 Msa0048000:three_prime_UTR
ATTGTGCAGGATCATGTTGA+AGG 0.557008 1_1:-81234788 Msa0048000:intron
TTGGTTTATTGGTCTTGATG+TGG 0.560157 1_1:-81234008 Msa0048000:CDS
CCTTTCTCTAGTGCCACGAC+AGG 0.562439 1_1:-81234967 Msa0048000:intron
TCTTCACAAGTATGCAAATG+AGG 0.564981 1_1:-81234047 Msa0048000:CDS
TATCCTAGATCGAGCTATTG+AGG 0.566969 1_1:-81234941 Msa0048000:CDS
CAATTAAATTTAGTTACAGA+GGG 0.567403 1_1:-81235994 Msa0048000:CDS
AAGCAAATAAAGCTATGACT+TGG 0.572489 1_1:-81237336 Msa0048000:exon
TCATGCAGATTGTGAATGGA+AGG 0.579298 1_1:-81233527 Msa0048000:intron
TCATTTGATTGGACATGCAG+TGG 0.579796 1_1:-81233478 Msa0048000:CDS
GGAGTGCTTCTTTCTAGGAG+AGG 0.580835 1_1:-81233387 Msa0048000:exon
TATTAGGAGCTTGATAGGCG+TGG 0.586397 1_1:+81233026 None:intergenic
TGTGAATGGAAGGCTCAAGC+GGG 0.589727 1_1:-81233517 Msa0048000:CDS
TCTTCTTTAGTTGCAAGAGA+AGG 0.590624 1_1:-81235883 Msa0048000:intron
TCCTATTCTAGTAGCTACCA+TGG 0.594371 1_1:+81233128 None:intergenic
AAAATTGCAGAAGGGTCCAT+GGG 0.596137 1_1:+81233171 None:intergenic
GTGAATCAACTGTTAGGAGA+AGG 0.596720 1_1:-81235619 Msa0048000:CDS
CTACTAGAATAGGAAAGCAT+GGG 0.603257 1_1:-81233119 Msa0048000:three_prime_UTR
ACAAGTATAACGTGGCACAT+AGG 0.604489 1_1:-81237612 Msa0048000:five_prime_UTR
ACAATTAAATTTAGTTACAG+AGG 0.607776 1_1:-81235995 Msa0048000:CDS
TTGTGAATGGAAGGCTCAAG+CGG 0.615812 1_1:-81233518 Msa0048000:CDS
ACTTGCGAGGACAACAGCAA+TGG 0.618474 1_1:-81236025 Msa0048000:CDS
GCTATGACTTGGAAAAGTAG+AGG 0.624639 1_1:-81237325 Msa0048000:CDS
GACTTGGAAAAGTAGAGGAG+AGG 0.626837 1_1:-81237320 Msa0048000:CDS
ATCTAGGATACCACCTGTCG+TGG 0.640845 1_1:+81234954 None:intergenic
AAAATTAAGGAGATTGACCA+TGG 0.643375 1_1:-81233145 Msa0048000:three_prime_UTR
GAGGCAGAAGATAGTAAACA+TGG 0.646324 1_1:-81234922 Msa0048000:CDS
GAAGTGAAGCGCGATACGAA+AGG 0.667111 1_1:-81235861 Msa0048000:CDS
ACCCATGACCAATTACAAAG+CGG 0.684488 1_1:+81235181 None:intergenic
GATGATCGTAGACTATGCTG+TGG 0.703632 1_1:-81233977 Msa0048000:CDS
CTGAACCTAAAGGACTTGCG+AGG 0.714939 1_1:-81236038 Msa0048000:CDS
AGCAAAGAACAAGTATAACG+TGG 0.730502 1_1:-81237620 Msa0048000:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCACTATTTTATAATAATT+AGG + chr1_1:81234380-81234399 None:intergenic 10.0%
!! TTATTAAACTCAAAAATATA+AGG + chr1_1:81235216-81235235 None:intergenic 10.0%
!!! ATTTTTTATATAAGCTATAT+AGG - chr1_1:81236075-81236094 Msa0048000:intron 10.0%
!! ATACAAATAAAAATTATATC+TGG - chr1_1:81236800-81236819 Msa0048000:intron 10.0%
!! TAAAACAAATAAAGATTTAT+AGG + chr1_1:81237119-81237138 None:intergenic 10.0%
!!! ATAATTTTAAATTCTTGAAT+TGG - chr1_1:81237151-81237170 Msa0048000:intron 10.0%
!! TAACATATATAGTAATAAAA+TGG + chr1_1:81237653-81237672 None:intergenic 10.0%
!!! TAGAAAAATCAAGTTTTTAT+TGG + chr1_1:81233817-81233836 None:intergenic 15.0%
!! TTTAAACCAAAAATTGTTAA+TGG + chr1_1:81233988-81234007 None:intergenic 15.0%
!! TGAGATTATATATATGATAA+TGG + chr1_1:81234218-81234237 None:intergenic 15.0%
!!! TTTGATGTTTTATTTAACAT+AGG - chr1_1:81234426-81234445 Msa0048000:intron 15.0%
!! TTAAATAAAAAGATGGATAA+AGG + chr1_1:81236360-81236379 None:intergenic 15.0%
!!! TCTTTTGTTAAATAAAAAGA+TGG + chr1_1:81236367-81236386 None:intergenic 15.0%
!! TATAATTGAAGTGAAATTAA+TGG - chr1_1:81236609-81236628 Msa0048000:intron 15.0%
!! AATCAATCATCTATTAATAT+AGG + chr1_1:81236775-81236794 None:intergenic 15.0%
!! TATAGAAAATGAAAATGAAA+AGG + chr1_1:81237421-81237440 None:intergenic 15.0%
!!! ATTTTATTAAAATTGCAGAA+GGG + chr1_1:81237545-81237564 None:intergenic 15.0%
!!! AATTTTATTAAAATTGCAGA+AGG + chr1_1:81237546-81237565 None:intergenic 15.0%
!!! CTGCAATTTTAATAAAATTA+AGG - chr1_1:81237547-81237566 Msa0048000:five_prime_UTR 15.0%
!! ATCAGTAGTATTTATTTATT+AGG + chr1_1:81237698-81237717 None:intergenic 15.0%
!! AACAAAAAAAATCTTCTACA+TGG + chr1_1:81233329-81233348 None:intergenic 20.0%
!! CAATCATCAATAAAAAAAAC+AGG + chr1_1:81233535-81233554 None:intergenic 20.0%
!! TCAATGAAAAACAAAGTTTA+AGG + chr1_1:81233700-81233719 None:intergenic 20.0%
!! GGAACTAAATTCATAAAAAT+TGG + chr1_1:81233727-81233746 None:intergenic 20.0%
!!! AAAAATCAAGTTTTTATTGG+TGG + chr1_1:81233814-81233833 None:intergenic 20.0%
!!! TTTAAGCCATTAACAATTTT+TGG - chr1_1:81233979-81233998 Msa0048000:CDS 20.0%
!!! ATAGATGGATCTTTTATTTT+TGG - chr1_1:81234348-81234367 Msa0048000:intron 20.0%
!!! TAGATGGATCTTTTATTTTT+GGG - chr1_1:81234349-81234368 Msa0048000:intron 20.0%
!! AAAAGACCTAAAAAATAAGT+TGG + chr1_1:81234406-81234425 None:intergenic 20.0%
!!! ATGTTTTATTTAACATAGGA+TGG - chr1_1:81234430-81234449 Msa0048000:intron 20.0%
!!! TGTAATATAAGATTTTCATG+TGG + chr1_1:81234456-81234475 None:intergenic 20.0%
!! ACAATTAAATTTAGTTACAG+AGG - chr1_1:81234710-81234729 Msa0048000:intron 20.0%
!! CAATTAAATTTAGTTACAGA+GGG - chr1_1:81234711-81234730 Msa0048000:intron 20.0%
!! ATAAGATGGTAATATATGAA+TGG + chr1_1:81235269-81235288 None:intergenic 20.0%
!! AATAGTATGATATGATAAGA+TGG + chr1_1:81235283-81235302 None:intergenic 20.0%
!!! TTTATAAACTATTGATTCTC+TGG - chr1_1:81235440-81235459 Msa0048000:intron 20.0%
!!! TTTTTTACTTCATAAGTAAG+AGG + chr1_1:81236589-81236608 None:intergenic 20.0%
!! GAGTACAATAATAGAATTTA+GGG + chr1_1:81237080-81237099 None:intergenic 20.0%
!! TGAGTACAATAATAGAATTT+AGG + chr1_1:81237081-81237100 None:intergenic 20.0%
!! TTAAATGTAGCAATGAAATT+AGG - chr1_1:81237377-81237396 Msa0048000:five_prime_UTR 20.0%
!!! TAAAAAAAAGAATGGATTGA+GGG + chr1_1:81237618-81237637 None:intergenic 20.0%
!!! TTAAAAAAAAGAATGGATTG+AGG + chr1_1:81237619-81237638 None:intergenic 20.0%
!! TCAAGCATTAAAAAAAAGAA+TGG + chr1_1:81237626-81237645 None:intergenic 20.0%
!!! TTCTTTTTTTTAATGCTTGA+AGG - chr1_1:81237626-81237645 Msa0048000:five_prime_UTR 20.0%
!!! TCTTTTTTTTAATGCTTGAA+GGG - chr1_1:81237627-81237646 Msa0048000:five_prime_UTR 20.0%
!!! AAGAAAATTTGGTGTGATTT+TGG + chr1_1:81233206-81233225 None:intergenic 25.0%
!!! TTTTTAAGCTTAGAAAACCA+TGG + chr1_1:81233574-81233593 None:intergenic 25.0%
! TTCTGATGGAACATAAAATA+GGG + chr1_1:81233917-81233936 None:intergenic 25.0%
! AATTGAGAGATATTAAGATG+AGG + chr1_1:81234082-81234101 None:intergenic 25.0%
!! TTTTGTGAACATTTAATCAC+TGG - chr1_1:81234100-81234119 Msa0048000:intron 25.0%
! TATATAATCTCACTCATCAA+TGG - chr1_1:81234226-81234245 Msa0048000:CDS 25.0%
!! TTGAAATGTTGATAGATAGA+TGG - chr1_1:81234333-81234352 Msa0048000:intron 25.0%
!!! GATAGTCCAACTTATTTTTT+AGG - chr1_1:81234397-81234416 Msa0048000:intron 25.0%
! AAGAAATTTATATGTGTGAC+AGG - chr1_1:81234631-81234650 Msa0048000:intron 25.0%
! AGACAAGACTATTTCAAATT+TGG - chr1_1:81234985-81235004 Msa0048000:intron 25.0%
! GACTATTTCAAATTTGGAAA+TGG - chr1_1:81234991-81235010 Msa0048000:intron 25.0%
! TGTTAATTCCTATAACCATT+AGG + chr1_1:81235114-81235133 None:intergenic 25.0%
! ACGTATGTGTAAAATGTTAT+CGG + chr1_1:81235246-81235265 None:intergenic 25.0%
! GATGATGTTCATGTAAATAT+AGG - chr1_1:81236025-81236044 Msa0048000:CDS 25.0%
! TTTCGAAGAGATTATAGAAA+CGG + chr1_1:81236160-81236179 None:intergenic 25.0%
! TTGCTGAAAATAGATTGAAT+TGG + chr1_1:81236238-81236257 None:intergenic 25.0%
! AATTATAATCTTCCTGAGTT+AGG + chr1_1:81237359-81237378 None:intergenic 25.0%
! AGAGAGAAAAAGAAAGTAAA+AGG - chr1_1:81237505-81237524 Msa0048000:five_prime_UTR 25.0%
!!! AAAAAAAAGAATGGATTGAG+GGG + chr1_1:81237617-81237636 None:intergenic 25.0%
! TTATTTATTAGGAGCTTGAT+AGG + chr1_1:81237687-81237706 None:intergenic 25.0%
GTGCAGAAAAGAAGAAAATT+TGG + chr1_1:81233217-81233236 None:intergenic 30.0%
!!! ATGTTTCTTCAGTTTTGTTC+TGG - chr1_1:81233266-81233285 Msa0048000:three_prime_UTR 30.0%
!! CATGTTTTGAACATGGTTTT+GGG - chr1_1:81233293-81233312 Msa0048000:three_prime_UTR 30.0%
AAGCAAATAAAGCTATGACT+TGG - chr1_1:81233369-81233388 Msa0048000:three_prime_UTR 30.0%
!!! TTTTGAGACATAAAGCTTCT+AGG + chr1_1:81233416-81233435 None:intergenic 30.0%
! GAAGCTTTATGTCTCAAAAA+TGG - chr1_1:81233417-81233436 Msa0048000:CDS 30.0%
! TGGATGATTTTCTTGTGTAT+TGG - chr1_1:81233437-81233456 Msa0048000:CDS 30.0%
AAGAAAATTCATGTACCTGT+TGG + chr1_1:81233489-81233508 None:intergenic 30.0%
!! GCTTTATTATGTGTTTTCCA+TGG - chr1_1:81233554-81233573 Msa0048000:intron 30.0%
!! TCATAAGAGTATTCTATCAC+TGG - chr1_1:81233630-81233649 Msa0048000:intron 30.0%
TGACTCAAATGAATTAGCAA+TGG + chr1_1:81233660-81233679 None:intergenic 30.0%
TGCTAATTCATTTGAGTCAT+TGG - chr1_1:81233661-81233680 Msa0048000:intron 30.0%
TATTGGTGGAACATAAGATA+GGG + chr1_1:81233800-81233819 None:intergenic 30.0%
TTATTGGTGGAACATAAGAT+AGG + chr1_1:81233801-81233820 None:intergenic 30.0%
GGAACTAAGCTCATAAAAAT+TGG + chr1_1:81233847-81233866 None:intergenic 30.0%
TCTGATGGAACATAAAATAG+GGG + chr1_1:81233916-81233935 None:intergenic 30.0%
CTTCTGATGGAACATAAAAT+AGG + chr1_1:81233918-81233937 None:intergenic 30.0%
TTCCATCAGAAGAAATGAAA+TGG - chr1_1:81233926-81233945 Msa0048000:intron 30.0%
ATCCATTTCATTTCTTCTGA+TGG + chr1_1:81233931-81233950 None:intergenic 30.0%
! TGGATCTGAAATGAATTGAT+TGG - chr1_1:81233946-81233965 Msa0048000:intron 30.0%
!! TAGAATTGACTTGACATTGA+GGG + chr1_1:81234035-81234054 None:intergenic 30.0%
AATTCATTATTAGGTGTCAG+AGG + chr1_1:81234261-81234280 None:intergenic 30.0%
TCTGACACCTAATAATGAAT+TGG - chr1_1:81234260-81234279 Msa0048000:CDS 30.0%
AGATGTGCCAATTCATTATT+AGG + chr1_1:81234270-81234289 None:intergenic 30.0%
AAAAACACCACAATAACTCA+AGG + chr1_1:81234606-81234625 None:intergenic 30.0%
GTTATATGTAACTCACTGTA+TGG + chr1_1:81234890-81234909 None:intergenic 30.0%
ATCTTCATATCTTCTGATAC+AGG + chr1_1:81235064-81235083 None:intergenic 30.0%
AGATAAGTGAATCAACTGTT+AGG - chr1_1:81235080-81235099 Msa0048000:intron 30.0%
TGAGAAAAGAAAGAAGTTAG+AGG - chr1_1:81235482-81235501 Msa0048000:intron 30.0%
ATTATCATCCGCTTTGTAAT+TGG - chr1_1:81235516-81235535 Msa0048000:intron 30.0%
TTGAAACTATAGAGATGAGA+TGG + chr1_1:81235553-81235572 None:intergenic 30.0%
ACTAAACTCGAGATAGTTAT+AGG + chr1_1:81235587-81235606 None:intergenic 30.0%
!! GTATGATCCTATTGATTTGA+AGG - chr1_1:81235855-81235874 Msa0048000:CDS 30.0%
!!! AATTTGTGTTTTGATTGTGC+AGG - chr1_1:81235904-81235923 Msa0048000:intron 30.0%
TTGTCTTTGCTGATAATTCA+AGG + chr1_1:81235946-81235965 None:intergenic 30.0%
TTTGTTTCCACGAGAATTTA+TGG - chr1_1:81236098-81236117 Msa0048000:intron 30.0%
CATATTTCCATAAATTCTCG+TGG + chr1_1:81236108-81236127 None:intergenic 30.0%
! AATCTATTTTCAGCAACACT+CGG - chr1_1:81236242-81236261 Msa0048000:intron 30.0%
TCATAAGTAAGAGGAAAAAG+TGG + chr1_1:81236580-81236599 None:intergenic 30.0%
AAAGAAGTCCACAAAAAATG+TGG - chr1_1:81237275-81237294 Msa0048000:CDS 30.0%
AAAATTAAGGAGATTGACCA+TGG - chr1_1:81237560-81237579 Msa0048000:five_prime_UTR 30.0%
AGCAAAGAACAAGTATAACG+TGG - chr1_1:81233085-81233104 Msa0048000:three_prime_UTR 35.0%
!! TTTACTTTTCACTTCTCGCT+TGG + chr1_1:81233134-81233153 None:intergenic 35.0%
! ACAGAGTAAGTACTCTGTTT+TGG + chr1_1:81233167-81233186 None:intergenic 35.0%
!! TGGAAACCATGTTTTGAACA+TGG - chr1_1:81233286-81233305 Msa0048000:three_prime_UTR 35.0%
CCAAAACCATGTTCAAAACA+TGG + chr1_1:81233295-81233314 None:intergenic 35.0%
!! CCATGTTTTGAACATGGTTT+TGG - chr1_1:81233292-81233311 Msa0048000:three_prime_UTR 35.0%
AGATAGGGTGAGAAAGTTTA+AGG + chr1_1:81233785-81233804 None:intergenic 35.0%
CTGATGGAACATAAAATAGG+GGG + chr1_1:81233915-81233934 None:intergenic 35.0%
!! CTAGAATTGACTTGACATTG+AGG + chr1_1:81234036-81234055 None:intergenic 35.0%
GAGAGATATTAAGATGAGGT+TGG + chr1_1:81234078-81234097 None:intergenic 35.0%
TTTATATGTGTGACAGGATG+TGG - chr1_1:81234637-81234656 Msa0048000:intron 35.0%
TCTTCTTTAGTTGCAAGAGA+AGG - chr1_1:81234822-81234841 Msa0048000:intron 35.0%
!! AGAAGGTACCTAATGGTTAT+AGG - chr1_1:81235103-81235122 Msa0048000:intron 35.0%
TGATCGAATTATGAACCTTG+TGG + chr1_1:81235187-81235206 None:intergenic 35.0%
AAAGTGTGCACAAGAATAGA+AGG + chr1_1:81235423-81235442 None:intergenic 35.0%
AAAGAAGTTAGAGGAAGAGA+AGG - chr1_1:81235491-81235510 Msa0048000:intron 35.0%
AAGAAGTTAGAGGAAGAGAA+GGG - chr1_1:81235492-81235511 Msa0048000:intron 35.0%
AAGTGATCATTACCAATCTC+AGG + chr1_1:81235815-81235834 None:intergenic 35.0%
!! TGATCCTATTGATTTGAAGG+AGG - chr1_1:81235858-81235877 Msa0048000:CDS 35.0%
CTTTCCTCCTTCAAATCAAT+AGG + chr1_1:81235865-81235884 None:intergenic 35.0%
ACATGTCAAAATTCTTGCAG+AGG - chr1_1:81236427-81236446 Msa0048000:intron 35.0%
AAAATTCTTGCAGAGGAGTA+AGG - chr1_1:81236434-81236453 Msa0048000:intron 35.0%
!! ATTTCCAGTATTCTGGTTCA+TGG + chr1_1:81236462-81236481 None:intergenic 35.0%
GAACCAGAATACTGGAAATT+TGG - chr1_1:81236463-81236482 Msa0048000:intron 35.0%
TCACCAAATTTCCAGTATTC+TGG + chr1_1:81236469-81236488 None:intergenic 35.0%
TCTTCACAAGTATGCAAATG+AGG - chr1_1:81236658-81236677 Msa0048000:intron 35.0%
GCAAATGAGGATGTTTCATT+AGG - chr1_1:81236671-81236690 Msa0048000:intron 35.0%
TCATTAGGAGCTTGGTTTAT+TGG - chr1_1:81236686-81236705 Msa0048000:intron 35.0%
!! TTGGTTTATTGGTCTTGATG+TGG - chr1_1:81236697-81236716 Msa0048000:intron 35.0%
! ACTTAAAACCCAACTTGCTT+GGG - chr1_1:81236969-81236988 Msa0048000:intron 35.0%
!! CATGTGTTGCTTCATTTGAT+TGG - chr1_1:81237216-81237235 Msa0048000:intron 35.0%
!!! CATTTTAATTACACGAGAGC+AGG - chr1_1:81237466-81237485 Msa0048000:five_prime_UTR 35.0%
! CTACTAGAATAGGAAAGCAT+GGG - chr1_1:81237586-81237605 Msa0048000:five_prime_UTR 35.0%
ACAAGTATAACGTGGCACAT+AGG - chr1_1:81233093-81233112 Msa0048000:three_prime_UTR 40.0%
TCTGTTCACTCTGATTCTTC+TGG - chr1_1:81233239-81233258 Msa0048000:three_prime_UTR 40.0%
! GCTATGACTTGGAAAAGTAG+AGG - chr1_1:81233380-81233399 Msa0048000:exon 40.0%
! CTGGAATGTTTTTCACCAAC+AGG - chr1_1:81233471-81233490 Msa0048000:CDS 40.0%
! GCTTTGTTACCAACTTACCA+TGG - chr1_1:81234578-81234597 Msa0048000:intron 40.0%
! CACAATAACTCAAGGTACCA+TGG + chr1_1:81234598-81234617 None:intergenic 40.0%
CATGGTACCTTGAGTTATTG+TGG - chr1_1:81234596-81234615 Msa0048000:intron 40.0%
TGGACTATTCCTGAACCTAA+AGG - chr1_1:81234657-81234676 Msa0048000:intron 40.0%
! GCTCAAGAGTCTCTAAAAAG+TGG - chr1_1:81235034-81235053 Msa0048000:intron 40.0%
GTGAATCAACTGTTAGGAGA+AGG - chr1_1:81235086-81235105 Msa0048000:intron 40.0%
!! TGTTAGGAGAAGGTACCTAA+TGG - chr1_1:81235096-81235115 Msa0048000:intron 40.0%
TTGATTCTCTGGTGACATCT+TGG - chr1_1:81235451-81235470 Msa0048000:intron 40.0%
ATCCGCTTTGTAATTGGTCA+TGG - chr1_1:81235522-81235541 Msa0048000:intron 40.0%
TCCGCTTTGTAATTGGTCAT+GGG - chr1_1:81235523-81235542 Msa0048000:intron 40.0%
ACCCATGACCAATTACAAAG+CGG + chr1_1:81235527-81235546 None:intergenic 40.0%
TATCCTAGATCGAGCTATTG+AGG - chr1_1:81235764-81235783 Msa0048000:intron 40.0%
GAGGCAGAAGATAGTAAACA+TGG - chr1_1:81235783-81235802 Msa0048000:intron 40.0%
ACATGGAGATTTCCTGAGAT+TGG - chr1_1:81235800-81235819 Msa0048000:intron 40.0%
ATTGTGCAGGATCATGTTGA+AGG - chr1_1:81235917-81235936 Msa0048000:intron 40.0%
GTTAACAGCAGTAGCAAAGT+AGG + chr1_1:81235972-81235991 None:intergenic 40.0%
! TTGCTACTGCTGTTAACTTG+TGG - chr1_1:81235975-81235994 Msa0048000:intron 40.0%
!! TGCTACTGCTGTTAACTTGT+GGG - chr1_1:81235976-81235995 Msa0048000:intron 40.0%
GCAAAACCACGAGTATACAT+CGG - chr1_1:81236287-81236306 Msa0048000:intron 40.0%
TACATCGGATGCATGAAATC+TGG - chr1_1:81236302-81236321 Msa0048000:intron 40.0%
!! TCTCACTTTTGAGCAAGAAC+CGG + chr1_1:81236329-81236348 None:intergenic 40.0%
! TACTGGAAATTTGGTGAGAC+AGG - chr1_1:81236472-81236491 Msa0048000:intron 40.0%
GGACTTTGTGTGTATGTGTT+AGG - chr1_1:81236630-81236649 Msa0048000:intron 40.0%
AGGATGTTTCATTAGGAGCT+TGG - chr1_1:81236678-81236697 Msa0048000:intron 40.0%
GACCGTCAATACATTCCTAA+GGG - chr1_1:81236822-81236841 Msa0048000:intron 40.0%
AGCCCTTAGGAATGTATTGA+CGG + chr1_1:81236827-81236846 None:intergenic 40.0%
TCTAGATTGCTAGCTAGTTG+AGG + chr1_1:81236926-81236945 None:intergenic 40.0%
! GACTTAAAACCCAACTTGCT+TGG - chr1_1:81236968-81236987 Msa0048000:intron 40.0%
! CTTAAAACCCAACTTGCTTG+GGG - chr1_1:81236970-81236989 Msa0048000:intron 40.0%
ACTTAAACCCCAAGCAAGTT+GGG + chr1_1:81236980-81236999 None:intergenic 40.0%
GGGTATTTATAGCGCTTTGT+GGG + chr1_1:81237017-81237036 None:intergenic 40.0%
! AGCGCTATAAATACCCCTTT+TGG - chr1_1:81237021-81237040 Msa0048000:intron 40.0%
CCTTGAGAATGATCCAAAAG+GGG + chr1_1:81237037-81237056 None:intergenic 40.0%
GCCTTGAGAATGATCCAAAA+GGG + chr1_1:81237038-81237057 None:intergenic 40.0%
TGCCTTGAGAATGATCCAAA+AGG + chr1_1:81237039-81237058 None:intergenic 40.0%
TCCATCATGCAGATTGTGAA+TGG - chr1_1:81237174-81237193 Msa0048000:intron 40.0%
TCCATTCACAATCTGCATGA+TGG + chr1_1:81237178-81237197 None:intergenic 40.0%
TCATGCAGATTGTGAATGGA+AGG - chr1_1:81237178-81237197 Msa0048000:intron 40.0%
TCATTTGATTGGACATGCAG+TGG - chr1_1:81237227-81237246 Msa0048000:intron 40.0%
GTCCACAAAAAATGTGGAGA+AGG - chr1_1:81237281-81237300 Msa0048000:CDS 40.0%
!!! CACCTTCTCCACATTTTTTG+TGG + chr1_1:81237286-81237305 None:intergenic 40.0%
! TTTGTGGAGTGCTTCTTTCT+AGG - chr1_1:81237313-81237332 Msa0048000:CDS 40.0%
! CTTCAAGTTCTTCCTAACTC+AGG - chr1_1:81237344-81237363 Msa0048000:exon 40.0%
!! AAGTAAAAGGTGTTGTCCCA+TGG - chr1_1:81237518-81237537 Msa0048000:five_prime_UTR 40.0%
AAAATTGCAGAAGGGTCCAT+GGG + chr1_1:81237537-81237556 None:intergenic 40.0%
TAAAATTGCAGAAGGGTCCA+TGG + chr1_1:81237538-81237557 None:intergenic 40.0%
ACCATGGTAGCTACTAGAAT+AGG - chr1_1:81237576-81237595 Msa0048000:five_prime_UTR 40.0%
TCCTATTCTAGTAGCTACCA+TGG + chr1_1:81237580-81237599 None:intergenic 40.0%
GCTACTAGAATAGGAAAGCA+TGG - chr1_1:81237585-81237604 Msa0048000:five_prime_UTR 40.0%
GTGTCTGTCTTTGCAGGTAA+GGG + chr1_1:81233005-81233024 None:intergenic 45.0%
TGTGTCTGTCTTTGCAGGTA+AGG + chr1_1:81233006-81233025 None:intergenic 45.0%
CTTTCTGTGTCTGTCTTTGC+AGG + chr1_1:81233011-81233030 None:intergenic 45.0%
GACTTGGAAAAGTAGAGGAG+AGG - chr1_1:81233385-81233404 Msa0048000:exon 45.0%
TGTATTGGAAGCTTCTGTGC+TGG - chr1_1:81233452-81233471 Msa0048000:CDS 45.0%
! CTCAAGGTACCATGGTAAGT+TGG + chr1_1:81234590-81234609 None:intergenic 45.0%
CTGGTGACATCTTGGAAAAC+AGG - chr1_1:81235459-81235478 Msa0048000:intron 45.0%
ATGCATCCGATGTATACTCG+TGG + chr1_1:81236296-81236315 None:intergenic 45.0%
GGTACCATGAACCAGAATAC+TGG - chr1_1:81236455-81236474 Msa0048000:intron 45.0%
AAGTACTTTCGTCATGCGAC+AGG - chr1_1:81236499-81236518 Msa0048000:intron 45.0%
GATGATCGTAGACTATGCTG+TGG - chr1_1:81236728-81236747 Msa0048000:intron 45.0%
AGACTATGCTGTGGTACAAC+AGG - chr1_1:81236737-81236756 Msa0048000:intron 45.0%
GGACCGTCAATACATTCCTA+AGG - chr1_1:81236821-81236840 Msa0048000:intron 45.0%
! AATGCCCTCTAGAAAGGCTT+AGG - chr1_1:81236849-81236868 Msa0048000:intron 45.0%
AGATTGCTAGCTAGTTGAGG+AGG + chr1_1:81236923-81236942 None:intergenic 45.0%
GACTTAAACCCCAAGCAAGT+TGG + chr1_1:81236981-81237000 None:intergenic 45.0%
! GGGGTATTTATAGCGCTTTG+TGG + chr1_1:81237018-81237037 None:intergenic 45.0%
! CCCCTTTTGGATCATTCTCA+AGG - chr1_1:81237034-81237053 Msa0048000:intron 45.0%
TTGTGAATGGAAGGCTCAAG+CGG - chr1_1:81237187-81237206 Msa0048000:intron 45.0%
GGACATGCAGTGGAATTTGT+AGG - chr1_1:81237237-81237256 Msa0048000:CDS 45.0%
GAGAAGGTGAGAAAGCTTTG+TGG - chr1_1:81237297-81237316 Msa0048000:CDS 45.0%
TATTAGGAGCTTGATAGGCG+TGG + chr1_1:81237682-81237701 None:intergenic 45.0%
!!! TATTTTTTTTAGTATATATT+TGG - chr1_1:81233594-81233613 Msa0048000:intron 5.0%
!! AAAAATCATATAATATTTAA+AGG + chr1_1:81233748-81233767 None:intergenic 5.0%
!! TTAAAAATCATATAATATAA+AGG + chr1_1:81233868-81233887 None:intergenic 5.0%
! CTCGCAAGTCCTTTAGGTTC+AGG + chr1_1:81234669-81234688 None:intergenic 50.0%
CTGAACCTAAAGGACTTGCG+AGG - chr1_1:81234667-81234686 Msa0048000:intron 50.0%
GTTGTCCTCGCAAGTCCTTT+AGG + chr1_1:81234675-81234694 None:intergenic 50.0%
ACTTGCGAGGACAACAGCAA+TGG - chr1_1:81234680-81234699 Msa0048000:intron 50.0%
GAAGTGAAGCGCGATACGAA+AGG - chr1_1:81234844-81234863 Msa0048000:intron 50.0%
TGAACCTTGTGGCATCCAAG+TGG + chr1_1:81235176-81235195 None:intergenic 50.0%
! ATCTAGGATACCACCTGTCG+TGG + chr1_1:81235754-81235773 None:intergenic 50.0%
CTGCCTCAATAGCTCGATCT+AGG + chr1_1:81235770-81235789 None:intergenic 50.0%
CGGATGCATGAAATCTGGAC+CGG - chr1_1:81236307-81236326 Msa0048000:intron 50.0%
TGTGAATGGAAGGCTCAAGC+GGG - chr1_1:81237188-81237207 Msa0048000:intron 50.0%
! GGAGTGCTTCTTTCTAGGAG+AGG - chr1_1:81237318-81237337 Msa0048000:CDS 50.0%
CCTGTCGTGGCACTAGAGAA+AGG + chr1_1:81235741-81235760 None:intergenic 55.0%
CCTTTCTCTAGTGCCACGAC+AGG - chr1_1:81235738-81235757 Msa0048000:intron 55.0%
TTCTCTAGTGCCACGACAGG+TGG - chr1_1:81235741-81235760 Msa0048000:intron 55.0%
!! TAGAGGGCATTCGAGCCCTT+AGG + chr1_1:81236840-81236859 None:intergenic 55.0%
! GGCTCGAATGCCCTCTAGAA+AGG - chr1_1:81236843-81236862 Msa0048000:intron 55.0%
GGCGCCTAAGCCTTTCTAGA+GGG + chr1_1:81236856-81236875 None:intergenic 55.0%
GAGATTCCGTTCGCGCCACT+TGG - chr1_1:81235158-81235177 Msa0048000:intron 60.0%
TGGCATCCAAGTGGCGCGAA+CGG + chr1_1:81235167-81235186 None:intergenic 60.0%
GGGCGCCTAAGCCTTTCTAG+AGG + chr1_1:81236857-81236876 None:intergenic 60.0%
CTATGCCTCAGGAGCCCTTC+TGG + chr1_1:81236881-81236900 None:intergenic 60.0%
CAGAAGGGCTCCTGAGGCAT+AGG - chr1_1:81236879-81236898 Msa0048000:intron 60.0%
!! TTGAGGAGGCGCCTCTGGAA+GGG + chr1_1:81236909-81236928 None:intergenic 60.0%
CGCGCCACTTGGATGCCACA+AGG - chr1_1:81235169-81235188 Msa0048000:intron 65.0%
AGGCTTAGGCGCCCTCCAGA+AGG - chr1_1:81236863-81236882 Msa0048000:intron 65.0%
GGCTTAGGCGCCCTCCAGAA+GGG - chr1_1:81236864-81236883 Msa0048000:intron 65.0%
GCCTCAGGAGCCCTTCTGGA+GGG + chr1_1:81236877-81236896 None:intergenic 65.0%
TGCCTCAGGAGCCCTTCTGG+AGG + chr1_1:81236878-81236897 None:intergenic 65.0%
!! GTTGAGGAGGCGCCTCTGGA+AGG + chr1_1:81236910-81236929 None:intergenic 65.0%
!! GCTAGTTGAGGAGGCGCCTC+TGG + chr1_1:81236914-81236933 None:intergenic 65.0%
GCCCTCCAGAAGGGCTCCTG+AGG - chr1_1:81236873-81236892 Msa0048000:intron 70.0%
! GAAGGGCGCGCCTATGCCTC+AGG + chr1_1:81236892-81236911 None:intergenic 70.0%
GCATAGGCGCGCCCTTCCAG+AGG - chr1_1:81236895-81236914 Msa0048000:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 81232966 81237761 81232966 ID=Msa0048000;Name=Msa0048000
chr1_1 mRNA 81232966 81237761 81232966 ID=Msa0048000-mRNA-1;Parent=Msa0048000;Name=Msa0048000-mRNA-1;_AED=0.07;_eAED=0.07;_QI=417|0.77|0.7|1|0.88|0.8|10|427|342
chr1_1 exon 81232966 81233541 81232966 ID=Msa0048000-mRNA-1:exon:28027;Parent=Msa0048000-mRNA-1
chr1_1 exon 81233969 81234075 81233969 ID=Msa0048000-mRNA-1:exon:28026;Parent=Msa0048000-mRNA-1
chr1_1 exon 81234155 81234280 81234155 ID=Msa0048000-mRNA-1:exon:28025;Parent=Msa0048000-mRNA-1
chr1_1 exon 81234734 81234801 81234734 ID=Msa0048000-mRNA-1:exon:28024;Parent=Msa0048000-mRNA-1
chr1_1 exon 81234906 81234978 81234906 ID=Msa0048000-mRNA-1:exon:28023;Parent=Msa0048000-mRNA-1
chr1_1 exon 81235183 81235232 81235183 ID=Msa0048000-mRNA-1:exon:28022;Parent=Msa0048000-mRNA-1
chr1_1 exon 81235562 81235748 81235562 ID=Msa0048000-mRNA-1:exon:28021;Parent=Msa0048000-mRNA-1
chr1_1 exon 81235834 81235895 81235834 ID=Msa0048000-mRNA-1:exon:28020;Parent=Msa0048000-mRNA-1
chr1_1 exon 81235978 81236074 81235978 ID=Msa0048000-mRNA-1:exon:28019;Parent=Msa0048000-mRNA-1
chr1_1 exon 81237235 81237761 81237235 ID=Msa0048000-mRNA-1:exon:28018;Parent=Msa0048000-mRNA-1
chr1_1 five_prime_UTR 81237345 81237761 81237345 ID=Msa0048000-mRNA-1:five_prime_utr;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81237235 81237344 81237235 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81235978 81236074 81235978 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81235834 81235895 81235834 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81235562 81235748 81235562 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81235183 81235232 81235183 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81234906 81234978 81234906 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81234734 81234801 81234734 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81234155 81234280 81234155 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81233969 81234075 81233969 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 CDS 81233393 81233541 81233393 ID=Msa0048000-mRNA-1:cds;Parent=Msa0048000-mRNA-1
chr1_1 three_prime_UTR 81232966 81233392 81232966 ID=Msa0048000-mRNA-1:three_prime_utr;Parent=Msa0048000-mRNA-1
Gene Sequence

>Msa0048000

ATGACTTGGAAAAGTAGAGGAGAGGTTGTTCCTAGAAGCTTTATGTCTCAAAAATGGATGATTTTCTTGTGTATTGGAAGCTTCTGTGCTGGAATGTTTTTCACCAACAGGATGTGGACTATTCCTGAACCTAAAGGACTTGCGAGGACAACAGCAATGGAATCTGAACAATTAAATTTAGTTACAGAGGGTTGTAATACAAGAATTTTGCAAGAGAAGGAAGTGAAGCGCGATACGAAAGGCGTTTTCAAGACACAAAAAACCATACAAAACTTAGACAAGACTATTTCAAATTTGGAAATGGAACTAGCTTCTGCTAAAGCAGCTCAAGAGTCTCTAAAAAGTGGTGCTCCTGTATCAGAAGATATGAAGATAAGTGAATCAACTGTTAGGAGAAGGTACCTAATGGTTATAGGAATTAACACTGCTTTTAGCAGCAGAAAAAGAAGAGATTCCAAGTTAGAGGAAGAGAAGGGCATTATCATCCGCTTTGTAATTGGTCATGGTGCCACGACAGGTGGTATCCTAGATCGAGCTATTGAGGCAGAAGATAGTAAACATGGAGATTTCCTGAGATTGGATCATGTTGAAGGATACCTTGAATTATCAGCAAAGACAAAAACCTACTTTGCTACTGCTGTTAACTTAGGAGTAAGGTACCATGAACCAGAATACTGGAAATTTGGTGAGACAGGAAACAAGTACTTTCGTCATGCGACAGGACAATTGTATGTTGTTTCAAAAGATCTTGCTACATACATTGCAACAAACAAGAATGTTCTTCACAAGTATGCAAATGAGGATGTTTCATTAGGAGCTTGGTTTATTGGTCTTGATGTGGAACACATAGATGATCGTAGACTATGCTGTGGTACAACAGATTGTGAATGGAAGGCTCAAGCGGGCAATGCATGTGTTGCTTCATTTGATTGGACATGCAGTGGAATTTGTAGGTCTGCTGAAAGAATTAAAGAAGTCCACAAAAAATGTGGAGAAGGTGAGAAAGCTTTGTGGAGTGCTTCTTTCTAG

Protein sequence

>Msa0048000

MTWKSRGEVVPRSFMSQKWMIFLCIGSFCAGMFFTNRMWTIPEPKGLARTTAMESEQLNLVTEGCNTRILQEKEVKRDTKGVFKTQKTIQNLDKTISNLEMELASAKAAQESLKSGAPVSEDMKISESTVRRRYLMVIGINTAFSSRKRRDSKLEEEKGIIIRFVIGHGATTGGILDRAIEAEDSKHGDFLRLDHVEGYLELSAKTKTYFATAVNLGVRYHEPEYWKFGETGNKYFRHATGQLYVVSKDLATYIATNKNVLHKYANEDVSLGAWFIGLDVEHIDDRRLCCGTTDCEWKAQAGNACVASFDWTCSGICRSAERIKEVHKKCGEGEKALWSASF*