AlfalfaGEDB | Msa0662330

M. sativa cultivar zhongmu-4 / Msa0662330

KEGG: -
GO: GO:0000151 GO:0000152 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010639 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031519 GO:0031935 GO:0031936 GO:0031974 GO:0031981 GO:0032991 GO:0033043 GO:0033044 GO:0034708 GO:0035097 GO:0035098 GO:0035102 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045815 GO:0045893 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0080090 GO:1902275 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:1990234 GO:2000112 GO:2001141 GO:2001251
PFAM: PF13359.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0662330	XP_024625946.1	98.025	405	8	0	1	405	1	405	0.0	829

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0662330	sp\|Q94K49\|ALP1_ARATH	70.492	366	104	2	22	386	32	394	0.0	550

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0047030	Msa0662330	0.829100	6.218615e-55	-8.615850e-47
Msa0063890	Msa0662330	0.813330	2.703097e-51	-8.615850e-47
Msa0089630	Msa0662330	0.810933	9.010755e-51	-8.615850e-47
Msa0101440	Msa0662330	0.815842	7.515905e-52	-8.615850e-47
Msa0662330	Msa0722810	0.802412	5.680586e-49	-8.615850e-47
Msa0662330	Msa0730430	0.804309	2.298438e-49	-8.615850e-47
Msa0662330	Msa0919770	0.807370	5.224436e-50	-8.615850e-47
Msa0662330	Msa0945110	0.827398	1.599638e-54	-8.615850e-47
Msa0662330	Msa1035970	0.927854	6.573995e-92	-8.615850e-47
Msa0662330	Msa1045140	0.814821	1.267164e-51	-8.615850e-47
Msa0662330	Msa1065390	0.800375	1.484688e-48	-8.615850e-47
Msa0662330	Msa1084960	0.829914	3.942178e-55	-8.615850e-47
Msa0662330	Msa1111090	0.827545	1.474478e-54	-8.615850e-47
Msa0662330	Msa1209460	0.811107	8.258173e-51	-8.615850e-47
Msa0662330	Msa1225700	0.815027	1.140720e-51	-8.615850e-47
Msa0662330	Msa1387870	0.813315	2.723860e-51	-8.615850e-47
Msa0662330	Msa1419370	0.816696	4.839930e-52	-8.615850e-47
Msa0168500	Msa0662330	0.802328	5.911156e-49	-8.615850e-47
Msa0428150	Msa0662330	0.812608	3.892305e-51	-8.615850e-47
Msa0462500	Msa0662330	0.819667	1.029885e-52	-8.615850e-47
Msa0255090	Msa0662330	0.819752	9.847654e-53	-8.615850e-47
Msa0259380	Msa0662330	0.821855	3.233705e-53	-8.615850e-47
Msa0292400	Msa0662330	0.824975	6.031973e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0662330	MtrunA17_Chr7g0260171	98.025	405	8	0	1	405	1	405	0.0	829
Msa0662330	MtrunA17_Chr2g0327831	45.707	396	193	9	1	387	1	383	3.05e-110	328
Msa0662330	MtrunA17_Chr1g0212591	44.330	388	204	7	7	386	8	391	2.24e-109	327
Msa0662330	MtrunA17_Chr2g0327851	50.000	330	157	6	64	386	2	330	5.80e-108	321
Msa0662330	MtrunA17_Chr1g0150771	29.041	365	210	10	51	401	204	533	2.33e-40	150
Msa0662330	MtrunA17_Chr4g0070891	27.473	364	225	9	33	388	144	476	4.21e-38	143
Msa0662330	MtrunA17_Chr4g0045251	31.599	269	176	5	89	354	136	399	2.11e-31	124
Msa0662330	MtrunA17_Chr4g0064951	30.060	336	204	11	62	388	103	416	7.25e-30	119
Msa0662330	MtrunA17_Chr4g0044711	28.041	296	192	8	50	343	74	350	1.63e-25	107
Msa0662330	MtrunA17_Chr2g0299751	31.210	157	92	5	33	188	171	312	2.45e-16	79.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0662330	AT3G63270.1	70.492	366	104	2	22	386	32	394	0.0	550
Msa0662330	AT3G55350.1	47.222	360	173	6	32	386	52	399	3.65e-114	340
Msa0662330	AT5G12010.1	27.887	355	220	9	56	401	173	500	4.91e-40	149
Msa0662330	AT4G29780.1	25.946	370	234	13	28	388	193	531	4.10e-30	122
Msa0662330	AT3G19120.1	29.043	303	202	8	96	390	146	443	2.25e-27	113
Msa0662330	AT1G72275.1	26.804	291	170	10	61	347	100	351	3.32e-20	92.4
Msa0662330	AT1G72275.2	26.804	291	170	10	61	347	100	351	3.65e-20	92.0

Find 103 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGATTGGTGGGAATCTTTC+TGG	0.139911	4_3:+74438788	Msa0662330:CDS
AATGGAAATGTTAGAAATTT+AGG	0.151189	4_3:+74439881	Msa0662330:CDS
CCAATCAACTTCATTGGTTT+TGG	0.153961	4_3:-74438773	None:intergenic
CAATGCAACCTCTGGATTTA+AGG	0.161356	4_3:-74440182	None:intergenic
TCTTCTTCTTTGGTTTCTTC+TGG	0.190103	4_3:-74438705	None:intergenic
CGTCTCAGCTGAAGCTGGTC+TGG	0.256990	4_3:+74438653	Msa0662330:five_prime_UTR
AAGGGTTTAAGTACTTCTTT+AGG	0.258988	4_3:+74439306	Msa0662330:CDS
AAGGACCGTGCGAGAAAATT+TGG	0.269963	4_3:+74440264	Msa0662330:CDS
GTCTCGGTTGGAGCTTCTTT+TGG	0.280937	4_3:+74439485	Msa0662330:CDS
CTTATTTAGAATTTGACTTT+TGG	0.318338	4_3:+74440349	Msa0662330:exon
CTTCTTTGGTTTCTTCTGGA+TGG	0.323168	4_3:-74438701	None:intergenic
TTGTCTGATCATCATGATTC+AGG	0.330253	4_3:+74440202	Msa0662330:CDS
TTCTTTGGTTTCTTCTGGAT+GGG	0.350645	4_3:-74438700	None:intergenic
CGGCATTCTATTGTTCAACT+TGG	0.364932	4_3:+74440629	Msa0662330:three_prime_UTR
AAGTTGCTATTGCTCTTAGA+AGG	0.366769	4_3:+74439441	Msa0662330:CDS
TCCTGCATTCTATCGGAATC+AGG	0.375908	4_3:-74439590	None:intergenic
CTTGCTTGCAATACTGTTCT+CGG	0.380182	4_3:-74440228	None:intergenic
TGCAAGCAAGTTGATCCTTC+AGG	0.383951	4_3:+74440241	Msa0662330:CDS
GATATTGTGACAGGTTTGCC+TGG	0.385360	4_3:+74439788	Msa0662330:CDS
TTCCCACCAATCAACTTCAT+TGG	0.388446	4_3:-74438779	None:intergenic
GCAATAATAATGAAGACATT+AGG	0.401588	4_3:-74440542	None:intergenic
AACCCTTGTGACTCATCATT+AGG	0.406907	4_3:-74439290	None:intergenic
GCGCTAAACGTCATCTGAAT+TGG	0.409730	4_3:+74439567	Msa0662330:CDS
AGGGTTTAAGTACTTCTTTA+GGG	0.410115	4_3:+74439307	Msa0662330:CDS
GTCTCAGCTGAAGCTGGTCT+GGG	0.422629	4_3:+74438654	Msa0662330:five_prime_UTR
GAGGGCACTTTCACTGTTGA+AGG	0.440423	4_3:+74440048	Msa0662330:CDS
TCAATAGCTCCACAGCAATT+AGG	0.444465	4_3:-74439647	None:intergenic
CAAAACGGGGAGCGTTTGAA+TGG	0.450386	4_3:+74439863	Msa0662330:CDS
GCTCTTAGAAGGTTGGCATC+TGG	0.451342	4_3:+74439452	Msa0662330:CDS
GACATTAGGATTCATTGAGC+TGG	0.455254	4_3:-74440528	None:intergenic
ACAGTTATCCTCTTCTTCCA+TGG	0.457258	4_3:+74439939	Msa0662330:CDS
TTTCACTGTTGAAGGGGAGT+TGG	0.458436	4_3:+74440056	Msa0662330:CDS
CGACGGTTTCACAGGTGACT+TGG	0.459760	4_3:+74439519	Msa0662330:CDS
CTTAATTTCCTGCATTCTAT+CGG	0.462253	4_3:-74439597	None:intergenic
TGCTATTGCTCTTAGAAGGT+TGG	0.463845	4_3:+74439445	Msa0662330:CDS
CATTCCATGTTGTATATGCT+TGG	0.469743	4_3:-74440287	None:intergenic
AGCTTGACTTCACTGTTCAC+TGG	0.470417	4_3:+74438627	Msa0662330:five_prime_UTR
AGATTCATTGATATTGTGAC+AGG	0.471542	4_3:+74439779	Msa0662330:CDS
TGATCAGACAATGCAACCTC+TGG	0.476463	4_3:-74440190	None:intergenic
AGAATGCAGGAAATTAAGTC+TGG	0.479770	4_3:+74439602	Msa0662330:CDS
TTCGTGTTTGTGATTAAAAG+TGG	0.489358	4_3:-74440005	None:intergenic
CCAAAACCAATGAAGTTGAT+TGG	0.489737	4_3:+74438773	Msa0662330:CDS
AATACATATGTTCTCTTGTG+AGG	0.490441	4_3:+74439348	Msa0662330:CDS
TCATCTGAGGTTTGAACAGC+CGG	0.490914	4_3:-74439695	None:intergenic
AAGTCAAATTCTAAATAAGA+TGG	0.492131	4_3:-74440345	None:intergenic
GAGTTGGAAAATCCTTAGTA+AGG	0.496899	4_3:+74440072	Msa0662330:CDS
AATTACAGCATGTTGTTACA+AGG	0.500789	4_3:+74439737	Msa0662330:CDS
GATCCAACACTAGTTTCATA+AGG	0.505076	4_3:-74439971	None:intergenic
ATCTGGCGAATCTCAAGTCT+CGG	0.506199	4_3:+74439469	Msa0662330:CDS
CAACATGTCAAGATAATGCT+TGG	0.509028	4_3:-74440124	None:intergenic
GGCGAATCTCAAGTCTCGGT+TGG	0.515282	4_3:+74439473	Msa0662330:CDS
CATAATATAATTATTGATTG+TGG	0.515654	4_3:+74440154	Msa0662330:CDS
TCTCGCACGGTCCTTCCTGA+AGG	0.518419	4_3:-74440256	None:intergenic
TGGCCAGTCGACGGTTTCAC+AGG	0.522158	4_3:+74439511	Msa0662330:CDS
CGGTTTCACAGGTGACTTGG+AGG	0.522564	4_3:+74439522	Msa0662330:CDS
CTGTTCAAACCTCAGATGAT+TGG	0.525541	4_3:+74439699	Msa0662330:CDS
CTCATATCAAGACCTCCATC+AGG	0.527080	4_3:+74439377	Msa0662330:CDS
GGCATTCTATTGTTCAACTT+GGG	0.527630	4_3:+74440630	Msa0662330:three_prime_UTR
GGTCTCGTCTCAGCTGAAGC+TGG	0.529882	4_3:+74438648	Msa0662330:five_prime_UTR
TGCAAGACTACTTGCAGTGA+GGG	0.530387	4_3:+74440030	Msa0662330:CDS
TCAGGACTTATCAACATTGA+AGG	0.531009	4_3:+74439395	Msa0662330:CDS
GTGATAAGAGAATATGTAGT+TGG	0.536303	4_3:+74439911	Msa0662330:CDS
GTCTCCACATAACCTTACTA+AGG	0.538553	4_3:-74440084	None:intergenic
TCACCTGTGAAACCGTCGAC+TGG	0.539753	4_3:-74439514	None:intergenic
ACATGTCGTGATGACACTTC+CGG	0.548584	4_3:+74439676	Msa0662330:CDS
TATGGTTTGCCTAATTGCTG+TGG	0.550020	4_3:+74439638	Msa0662330:CDS
AACCAATGAAGTTGATTGGT+GGG	0.551092	4_3:+74438777	Msa0662330:CDS
AAATCCTTAGTAAGGTTATG+TGG	0.551795	4_3:+74440080	Msa0662330:CDS
GCCTGATTCCGATAGAATGC+AGG	0.554122	4_3:+74439589	Msa0662330:CDS
GGAACAACCGAGTCAATCAA+TGG	0.556579	4_3:+74438675	Msa0662330:exon
ACGCCTTATGAAACTAGTGT+TGG	0.566953	4_3:+74439968	Msa0662330:CDS
ATACATATGTTCTCTTGTGA+GGG	0.574807	4_3:+74439349	Msa0662330:CDS
AGGGCACTTTCACTGTTGAA+GGG	0.575665	4_3:+74440049	Msa0662330:CDS
GAGGTTTGTTGAGGCGCTTG+AGG	0.580047	4_3:+74439541	Msa0662330:CDS
GGTGACTTGGAGGTTTGTTG+AGG	0.580262	4_3:+74439532	Msa0662330:CDS
CATATGTTCTCTTGTGAGGG+AGG	0.581427	4_3:+74439352	Msa0662330:CDS
AAACCAATGAAGTTGATTGG+TGG	0.581459	4_3:+74438776	Msa0662330:CDS
GACTTATCAACATTGAAGGA+AGG	0.586003	4_3:+74439399	Msa0662330:CDS
GGAAATGTTAGAAATTTAGG+TGG	0.586192	4_3:+74439884	Msa0662330:CDS
ATATTGTGACAGGTTTGCCT+GGG	0.589924	4_3:+74439789	Msa0662330:CDS
TCAATGTTGATAAGTCCTGA+TGG	0.594934	4_3:-74439392	None:intergenic
GTCATAAGCCATGGAAGAAG+AGG	0.595419	4_3:-74439947	None:intergenic
TTGATCACACCAATCATCTG+AGG	0.598185	4_3:-74439708	None:intergenic
GGGCACTTTCACTGTTGAAG+GGG	0.601744	4_3:+74440050	Msa0662330:CDS
ATGGGTGCCATTGATTGACT+CGG	0.605252	4_3:-74438682	None:intergenic
TAAGAGAATATGTAGTTGGT+GGG	0.609887	4_3:+74439915	Msa0662330:CDS
TCATAAGGCGTCATAAGCCA+TGG	0.610829	4_3:-74439956	None:intergenic
GTACCTAATGATGAGTCACA+AGG	0.636305	4_3:+74439287	Msa0662330:CDS
TTTCAAGCTCTCACAAAACG+GGG	0.644673	4_3:+74439850	Msa0662330:CDS
TGGGTTCAACAGGAACAACA+AGG	0.649619	4_3:-74438753	None:intergenic
ATAAGAGAATATGTAGTTGG+TGG	0.654010	4_3:+74439914	Msa0662330:CDS
TTGGCCAAGCATATACAACA+TGG	0.657249	4_3:+74440283	Msa0662330:CDS
GGAATGCAATTAGATGCTCA+TGG	0.658512	4_3:+74440304	Msa0662330:CDS
ATTCTAAATAAGATGGACAG+AGG	0.659752	4_3:-74440338	None:intergenic
TGGAGACACCTTAAATCCAG+AGG	0.660988	4_3:+74440174	Msa0662330:CDS
AGCAAGTTGATCCTTCAGGA+AGG	0.663505	4_3:+74440245	Msa0662330:CDS
TACCTAATGATGAGTCACAA+GGG	0.675869	4_3:+74439288	Msa0662330:CDS
CTGCAAGACTACTTGCAGTG+AGG	0.676253	4_3:+74440029	Msa0662330:CDS
AGTTGAACAATAGAATGCCG+AGG	0.689789	4_3:-74440626	None:intergenic
TATTGTGACAGGTTTGCCTG+GGG	0.690512	4_3:+74439790	Msa0662330:CDS
ATGTTGATAAGTCCTGATGG+AGG	0.717185	4_3:-74439389	None:intergenic
ATTGTGACAGGTTTGCCTGG+GGG	0.725993	4_3:+74439791	Msa0662330:CDS
AGTTGAACAACAAAATCCTG+AGG	0.726146	4_3:-74440372	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTACTCATTAATTAATTTT+TGG	+	chr4_3:74439209-74439228	Msa0662330:intron	10.0%
!!!	TTTACTCATTAATTAATTTT+TGG	+	chr4_3:74439209-74439228	Msa0662330:intron	10.0%
!!	AGATGATAATATAATACAAA+GGG	-	chr4_3:74438926-74438945	None:intergenic	15.0%
!!!	CATAATATAATTATTGATTG+TGG	+	chr4_3:74440154-74440173	Msa0662330:CDS	15.0%
!!	AGATGATAATATAATACAAA+GGG	-	chr4_3:74438926-74438945	None:intergenic	15.0%
!!!	CATAATATAATTATTGATTG+TGG	+	chr4_3:74440154-74440173	Msa0662330:CDS	15.0%
!!	ACAAAGATTGAAAATTTGAA+GGG	-	chr4_3:74438873-74438892	None:intergenic	20.0%
!!	AACAAAGATTGAAAATTTGA+AGG	-	chr4_3:74438874-74438893	None:intergenic	20.0%
!!	GAGATGATAATATAATACAA+AGG	-	chr4_3:74438927-74438946	None:intergenic	20.0%
!!	AAGAAAATCCATATATTGAA+TGG	-	chr4_3:74438966-74438985	None:intergenic	20.0%
!!!	CATTAATTAATTTTTGGAGA+CGG	+	chr4_3:74439215-74439234	Msa0662330:intron	20.0%
!!	AATGGAAATGTTAGAAATTT+AGG	+	chr4_3:74439881-74439900	Msa0662330:CDS	20.0%
!!	AAGTCAAATTCTAAATAAGA+TGG	-	chr4_3:74440348-74440367	None:intergenic	20.0%
!!!	CTTATTTAGAATTTGACTTT+TGG	+	chr4_3:74440349-74440368	Msa0662330:exon	20.0%
!!	ACAAAGATTGAAAATTTGAA+GGG	-	chr4_3:74438873-74438892	None:intergenic	20.0%
!!	AACAAAGATTGAAAATTTGA+AGG	-	chr4_3:74438874-74438893	None:intergenic	20.0%
!!	GAGATGATAATATAATACAA+AGG	-	chr4_3:74438927-74438946	None:intergenic	20.0%
!!	AAGAAAATCCATATATTGAA+TGG	-	chr4_3:74438966-74438985	None:intergenic	20.0%
!!!	CATTAATTAATTTTTGGAGA+CGG	+	chr4_3:74439215-74439234	Msa0662330:intron	20.0%
!!	AATGGAAATGTTAGAAATTT+AGG	+	chr4_3:74439881-74439900	Msa0662330:CDS	20.0%
!!	AAGTCAAATTCTAAATAAGA+TGG	-	chr4_3:74440348-74440367	None:intergenic	20.0%
!!!	CTTATTTAGAATTTGACTTT+TGG	+	chr4_3:74440349-74440368	Msa0662330:exon	20.0%
!	ATTGAAAATTTGAAGGGAAA+TGG	-	chr4_3:74438867-74438886	None:intergenic	25.0%
!	ATGTCATTCCATTCAATATA+TGG	+	chr4_3:74438955-74438974	Msa0662330:intron	25.0%
!!	TTTTTGTCGAAGTCTAAATT+GGG	-	chr4_3:74439069-74439088	None:intergenic	25.0%
!!!	TTTTTTGTCGAAGTCTAAAT+TGG	-	chr4_3:74439070-74439089	None:intergenic	25.0%
!!!	TTGTTTCTGACATTTTCATT+AGG	+	chr4_3:74439102-74439121	Msa0662330:intron	25.0%
!	TAATCTCTGGCATTTATATA+TGG	-	chr4_3:74439149-74439168	None:intergenic	25.0%
!	ATAAATGCCAGAGATTAAAT+TGG	+	chr4_3:74439152-74439171	Msa0662330:intron	25.0%
!	TAACATTCACCAAAAACAAT+GGG	-	chr4_3:74440447-74440466	None:intergenic	25.0%
!	TTAACATTCACCAAAAACAA+TGG	-	chr4_3:74440448-74440467	None:intergenic	25.0%
!	GCAATAATAATGAAGACATT+AGG	-	chr4_3:74440545-74440564	None:intergenic	25.0%
!	ATTGAAAATTTGAAGGGAAA+TGG	-	chr4_3:74438867-74438886	None:intergenic	25.0%
!	ATGTCATTCCATTCAATATA+TGG	+	chr4_3:74438955-74438974	Msa0662330:intron	25.0%
!!	TTTTTGTCGAAGTCTAAATT+GGG	-	chr4_3:74439069-74439088	None:intergenic	25.0%
!!!	TTTTTTGTCGAAGTCTAAAT+TGG	-	chr4_3:74439070-74439089	None:intergenic	25.0%
!!!	TTGTTTCTGACATTTTCATT+AGG	+	chr4_3:74439102-74439121	Msa0662330:intron	25.0%
!	TAATCTCTGGCATTTATATA+TGG	-	chr4_3:74439149-74439168	None:intergenic	25.0%
!	ATAAATGCCAGAGATTAAAT+TGG	+	chr4_3:74439152-74439171	Msa0662330:intron	25.0%
!	TAACATTCACCAAAAACAAT+GGG	-	chr4_3:74440447-74440466	None:intergenic	25.0%
!	TTAACATTCACCAAAAACAA+TGG	-	chr4_3:74440448-74440467	None:intergenic	25.0%
!	GCAATAATAATGAAGACATT+AGG	-	chr4_3:74440545-74440564	None:intergenic	25.0%
!!	TTCTTTTTGGTCTTCTTCTT+TGG	-	chr4_3:74438718-74438737	None:intergenic	30.0%
!	CACTTGTTTGTGTTTCTTTT+TGG	-	chr4_3:74438731-74438750	None:intergenic	30.0%
!!!	CAATCAACTTCATTGGTTTT+GGG	-	chr4_3:74438775-74438794	None:intergenic	30.0%
!!	TTCATTCTAGAACAACAACA+TGG	-	chr4_3:74438902-74438921	None:intergenic	30.0%
	TTACCACACCTCATTATTAA+AGG	+	chr4_3:74438984-74439003	Msa0662330:intron	30.0%
	TACCACACCTCATTATTAAA+GGG	+	chr4_3:74438985-74439004	Msa0662330:intron	30.0%
	ATCAATGCCCTTTAATAATG+AGG	-	chr4_3:74438995-74439014	None:intergenic	30.0%
	ATTGTTGCAAAAATGTACAC+AGG	+	chr4_3:74439257-74439276	Msa0662330:intron	30.0%
	AAGGGTTTAAGTACTTCTTT+AGG	+	chr4_3:74439306-74439325	Msa0662330:CDS	30.0%
	AGGGTTTAAGTACTTCTTTA+GGG	+	chr4_3:74439307-74439326	Msa0662330:CDS	30.0%
	AATACATATGTTCTCTTGTG+AGG	+	chr4_3:74439348-74439367	Msa0662330:CDS	30.0%
	ATACATATGTTCTCTTGTGA+GGG	+	chr4_3:74439349-74439368	Msa0662330:CDS	30.0%
	CTTAATTTCCTGCATTCTAT+CGG	-	chr4_3:74439600-74439619	None:intergenic	30.0%
	AATTACAGCATGTTGTTACA+AGG	+	chr4_3:74439737-74439756	Msa0662330:CDS	30.0%
	AGATTCATTGATATTGTGAC+AGG	+	chr4_3:74439779-74439798	Msa0662330:CDS	30.0%
!!!	TTTTTCAAGCTCTCACAAAA+CGG	+	chr4_3:74439848-74439867	Msa0662330:CDS	30.0%
	GGAAATGTTAGAAATTTAGG+TGG	+	chr4_3:74439884-74439903	Msa0662330:CDS	30.0%
	GTGATAAGAGAATATGTAGT+TGG	+	chr4_3:74439911-74439930	Msa0662330:CDS	30.0%
	ATAAGAGAATATGTAGTTGG+TGG	+	chr4_3:74439914-74439933	Msa0662330:CDS	30.0%
	TAAGAGAATATGTAGTTGGT+GGG	+	chr4_3:74439915-74439934	Msa0662330:CDS	30.0%
	TTCGTGTTTGTGATTAAAAG+TGG	-	chr4_3:74440008-74440027	None:intergenic	30.0%
	AAATCCTTAGTAAGGTTATG+TGG	+	chr4_3:74440080-74440099	Msa0662330:CDS	30.0%
!	CTTGGCAATTTCTTTTTATC+AGG	-	chr4_3:74440109-74440128	None:intergenic	30.0%
	ATTCTAAATAAGATGGACAG+AGG	-	chr4_3:74440341-74440360	None:intergenic	30.0%
!	TTCTCTTATCCCATTGTTTT+TGG	+	chr4_3:74440435-74440454	Msa0662330:three_prime_UTR	30.0%
!!	TTCTTTTTGGTCTTCTTCTT+TGG	-	chr4_3:74438718-74438737	None:intergenic	30.0%
!	CACTTGTTTGTGTTTCTTTT+TGG	-	chr4_3:74438731-74438750	None:intergenic	30.0%
!!!	CAATCAACTTCATTGGTTTT+GGG	-	chr4_3:74438775-74438794	None:intergenic	30.0%
!!	TTCATTCTAGAACAACAACA+TGG	-	chr4_3:74438902-74438921	None:intergenic	30.0%
	TTACCACACCTCATTATTAA+AGG	+	chr4_3:74438984-74439003	Msa0662330:intron	30.0%
	TACCACACCTCATTATTAAA+GGG	+	chr4_3:74438985-74439004	Msa0662330:intron	30.0%
	ATCAATGCCCTTTAATAATG+AGG	-	chr4_3:74438995-74439014	None:intergenic	30.0%
	ATTGTTGCAAAAATGTACAC+AGG	+	chr4_3:74439257-74439276	Msa0662330:intron	30.0%
	AAGGGTTTAAGTACTTCTTT+AGG	+	chr4_3:74439306-74439325	Msa0662330:CDS	30.0%
	AGGGTTTAAGTACTTCTTTA+GGG	+	chr4_3:74439307-74439326	Msa0662330:CDS	30.0%
	AATACATATGTTCTCTTGTG+AGG	+	chr4_3:74439348-74439367	Msa0662330:CDS	30.0%
	ATACATATGTTCTCTTGTGA+GGG	+	chr4_3:74439349-74439368	Msa0662330:CDS	30.0%
	CTTAATTTCCTGCATTCTAT+CGG	-	chr4_3:74439600-74439619	None:intergenic	30.0%
	AATTACAGCATGTTGTTACA+AGG	+	chr4_3:74439737-74439756	Msa0662330:CDS	30.0%
	AGATTCATTGATATTGTGAC+AGG	+	chr4_3:74439779-74439798	Msa0662330:CDS	30.0%
!!!	TTTTTCAAGCTCTCACAAAA+CGG	+	chr4_3:74439848-74439867	Msa0662330:CDS	30.0%
	GGAAATGTTAGAAATTTAGG+TGG	+	chr4_3:74439884-74439903	Msa0662330:CDS	30.0%
	GTGATAAGAGAATATGTAGT+TGG	+	chr4_3:74439911-74439930	Msa0662330:CDS	30.0%
	ATAAGAGAATATGTAGTTGG+TGG	+	chr4_3:74439914-74439933	Msa0662330:CDS	30.0%
	TAAGAGAATATGTAGTTGGT+GGG	+	chr4_3:74439915-74439934	Msa0662330:CDS	30.0%
	TTCGTGTTTGTGATTAAAAG+TGG	-	chr4_3:74440008-74440027	None:intergenic	30.0%
	AAATCCTTAGTAAGGTTATG+TGG	+	chr4_3:74440080-74440099	Msa0662330:CDS	30.0%
!	CTTGGCAATTTCTTTTTATC+AGG	-	chr4_3:74440109-74440128	None:intergenic	30.0%
	ATTCTAAATAAGATGGACAG+AGG	-	chr4_3:74440341-74440360	None:intergenic	30.0%
!	TTCTCTTATCCCATTGTTTT+TGG	+	chr4_3:74440435-74440454	Msa0662330:three_prime_UTR	30.0%
!	TTCTTTGGTTTCTTCTGGAT+GGG	-	chr4_3:74438703-74438722	None:intergenic	35.0%
!	TCTTCTTCTTTGGTTTCTTC+TGG	-	chr4_3:74438708-74438727	None:intergenic	35.0%
!!!	CCAATCAACTTCATTGGTTT+TGG	-	chr4_3:74438776-74438795	None:intergenic	35.0%
!	CCAAAACCAATGAAGTTGAT+TGG	+	chr4_3:74438773-74438792	Msa0662330:CDS	35.0%
!	AAACCAATGAAGTTGATTGG+TGG	+	chr4_3:74438776-74438795	Msa0662330:CDS	35.0%
!	AACCAATGAAGTTGATTGGT+GGG	+	chr4_3:74438777-74438796	Msa0662330:CDS	35.0%
	AAAGAGAAGAAACCAAACCT+GGG	-	chr4_3:74438831-74438850	None:intergenic	35.0%
	AAAAGAGAAGAAACCAAACC+TGG	-	chr4_3:74438832-74438851	None:intergenic	35.0%
!	AAAGACCCATGATTTTCTCA+CGG	+	chr4_3:74439043-74439062	Msa0662330:intron	35.0%
	TACCTAATGATGAGTCACAA+GGG	+	chr4_3:74439288-74439307	Msa0662330:CDS	35.0%
!	TCAATGTTGATAAGTCCTGA+TGG	-	chr4_3:74439395-74439414	None:intergenic	35.0%
	TCAGGACTTATCAACATTGA+AGG	+	chr4_3:74439395-74439414	Msa0662330:CDS	35.0%
	GACTTATCAACATTGAAGGA+AGG	+	chr4_3:74439399-74439418	Msa0662330:CDS	35.0%
!	AAGTTGCTATTGCTCTTAGA+AGG	+	chr4_3:74439441-74439460	Msa0662330:CDS	35.0%
	AGAATGCAGGAAATTAAGTC+TGG	+	chr4_3:74439602-74439621	Msa0662330:CDS	35.0%
!!	TTTTCAAGCTCTCACAAAAC+GGG	+	chr4_3:74439849-74439868	Msa0662330:CDS	35.0%
!	GATCCAACACTAGTTTCATA+AGG	-	chr4_3:74439974-74439993	None:intergenic	35.0%
	GAGTTGGAAAATCCTTAGTA+AGG	+	chr4_3:74440072-74440091	Msa0662330:CDS	35.0%
	CAACATGTCAAGATAATGCT+TGG	-	chr4_3:74440127-74440146	None:intergenic	35.0%
	TTGTCTGATCATCATGATTC+AGG	+	chr4_3:74440202-74440221	Msa0662330:CDS	35.0%
	CATTCCATGTTGTATATGCT+TGG	-	chr4_3:74440290-74440309	None:intergenic	35.0%
	AGTTGAACAACAAAATCCTG+AGG	-	chr4_3:74440375-74440394	None:intergenic	35.0%
!	TAGAATTCGACTTTTTGCCT+CGG	+	chr4_3:74440609-74440628	Msa0662330:three_prime_UTR	35.0%
	GGCATTCTATTGTTCAACTT+GGG	+	chr4_3:74440630-74440649	Msa0662330:three_prime_UTR	35.0%
!	TTGGGCAGAGTTTCTATTTT+TGG	+	chr4_3:74440648-74440667	Msa0662330:three_prime_UTR	35.0%
!	TTCTTTGGTTTCTTCTGGAT+GGG	-	chr4_3:74438703-74438722	None:intergenic	35.0%
!	TCTTCTTCTTTGGTTTCTTC+TGG	-	chr4_3:74438708-74438727	None:intergenic	35.0%
!!!	CCAATCAACTTCATTGGTTT+TGG	-	chr4_3:74438776-74438795	None:intergenic	35.0%
!	CCAAAACCAATGAAGTTGAT+TGG	+	chr4_3:74438773-74438792	Msa0662330:CDS	35.0%
!	AAACCAATGAAGTTGATTGG+TGG	+	chr4_3:74438776-74438795	Msa0662330:CDS	35.0%
!	AACCAATGAAGTTGATTGGT+GGG	+	chr4_3:74438777-74438796	Msa0662330:CDS	35.0%
	AAAGAGAAGAAACCAAACCT+GGG	-	chr4_3:74438831-74438850	None:intergenic	35.0%
	AAAAGAGAAGAAACCAAACC+TGG	-	chr4_3:74438832-74438851	None:intergenic	35.0%
!	AAAGACCCATGATTTTCTCA+CGG	+	chr4_3:74439043-74439062	Msa0662330:intron	35.0%
	TACCTAATGATGAGTCACAA+GGG	+	chr4_3:74439288-74439307	Msa0662330:CDS	35.0%
!	TCAATGTTGATAAGTCCTGA+TGG	-	chr4_3:74439395-74439414	None:intergenic	35.0%
	TCAGGACTTATCAACATTGA+AGG	+	chr4_3:74439395-74439414	Msa0662330:CDS	35.0%
	GACTTATCAACATTGAAGGA+AGG	+	chr4_3:74439399-74439418	Msa0662330:CDS	35.0%
!	AAGTTGCTATTGCTCTTAGA+AGG	+	chr4_3:74439441-74439460	Msa0662330:CDS	35.0%
	AGAATGCAGGAAATTAAGTC+TGG	+	chr4_3:74439602-74439621	Msa0662330:CDS	35.0%
!!	TTTTCAAGCTCTCACAAAAC+GGG	+	chr4_3:74439849-74439868	Msa0662330:CDS	35.0%
!	GATCCAACACTAGTTTCATA+AGG	-	chr4_3:74439974-74439993	None:intergenic	35.0%
	GAGTTGGAAAATCCTTAGTA+AGG	+	chr4_3:74440072-74440091	Msa0662330:CDS	35.0%
	CAACATGTCAAGATAATGCT+TGG	-	chr4_3:74440127-74440146	None:intergenic	35.0%
	TTGTCTGATCATCATGATTC+AGG	+	chr4_3:74440202-74440221	Msa0662330:CDS	35.0%
	CATTCCATGTTGTATATGCT+TGG	-	chr4_3:74440290-74440309	None:intergenic	35.0%
	AGTTGAACAACAAAATCCTG+AGG	-	chr4_3:74440375-74440394	None:intergenic	35.0%
!	TAGAATTCGACTTTTTGCCT+CGG	+	chr4_3:74440609-74440628	Msa0662330:three_prime_UTR	35.0%
	CATTCTATTGTTCAACTT+GGG	+	chr4_3:74440632-74440651	Msa0662330:three_prime_UTR	35.0%
!	TTGGGCAGAGTTTCTATTTT+TGG	+	chr4_3:74440648-74440667	Msa0662330:three_prime_UTR	35.0%
!	CTTCTTTGGTTTCTTCTGGA+TGG	-	chr4_3:74438704-74438723	None:intergenic	40.0%
!!!	TCATTGGTTTTGGGTTCAAC+AGG	-	chr4_3:74438766-74438785	None:intergenic	40.0%
	TTCCCACCAATCAACTTCAT+TGG	-	chr4_3:74438782-74438801	None:intergenic	40.0%
	TTGATTGGTGGGAATCTTTC+TGG	+	chr4_3:74438788-74438807	Msa0662330:CDS	40.0%
	AAGAGAAGAAACCAAACCTG+GGG	-	chr4_3:74438830-74438849	None:intergenic	40.0%
	TGCCCTTTAATAATGAGGTG+TGG	-	chr4_3:74438990-74439009	None:intergenic	40.0%
	TCGTGGTCCAATTTAATCTC+TGG	-	chr4_3:74439162-74439181	None:intergenic	40.0%
!!	TGGAGACGGTGTTATTGATA+TGG	+	chr4_3:74439229-74439248	Msa0662330:intron	40.0%
	GTACCTAATGATGAGTCACA+AGG	+	chr4_3:74439287-74439306	Msa0662330:CDS	40.0%
	AACCCTTGTGACTCATCATT+AGG	-	chr4_3:74439293-74439312	None:intergenic	40.0%
!	ATGTTGATAAGTCCTGATGG+AGG	-	chr4_3:74439392-74439411	None:intergenic	40.0%
	TGCTATTGCTCTTAGAAGGT+TGG	+	chr4_3:74439445-74439464	Msa0662330:CDS	40.0%
!!!	TCTGGTTTTGAAGCGTTGTA+TGG	+	chr4_3:74439620-74439639	Msa0662330:CDS	40.0%
!	TATGGTTTGCCTAATTGCTG+TGG	+	chr4_3:74439638-74439657	Msa0662330:CDS	40.0%
	TCAATAGCTCCACAGCAATT+AGG	-	chr4_3:74439650-74439669	None:intergenic	40.0%
	CTGTTCAAACCTCAGATGAT+TGG	+	chr4_3:74439699-74439718	Msa0662330:CDS	40.0%
	TTGATCACACCAATCATCTG+AGG	-	chr4_3:74439711-74439730	None:intergenic	40.0%
	ATATTGTGACAGGTTTGCCT+GGG	+	chr4_3:74439789-74439808	Msa0662330:CDS	40.0%
	TTTCAAGCTCTCACAAAACG+GGG	+	chr4_3:74439850-74439869	Msa0662330:CDS	40.0%
	ACAGTTATCCTCTTCTTCCA+TGG	+	chr4_3:74439939-74439958	Msa0662330:CDS	40.0%
	ACGCCTTATGAAACTAGTGT+TGG	+	chr4_3:74439968-74439987	Msa0662330:CDS	40.0%
	GTCTCCACATAACCTTACTA+AGG	-	chr4_3:74440087-74440106	None:intergenic	40.0%
	CAATGCAACCTCTGGATTTA+AGG	-	chr4_3:74440185-74440204	None:intergenic	40.0%
	CTTGCTTGCAATACTGTTCT+CGG	-	chr4_3:74440231-74440250	None:intergenic	40.0%
	TTGGCCAAGCATATACAACA+TGG	+	chr4_3:74440283-74440302	Msa0662330:CDS	40.0%
	GGAATGCAATTAGATGCTCA+TGG	+	chr4_3:74440304-74440323	Msa0662330:CDS	40.0%
!!	AGAATTTGACTTTTGGCCTC+AGG	+	chr4_3:74440356-74440375	Msa0662330:exon	40.0%
	GACATTAGGATTCATTGAGC+TGG	-	chr4_3:74440531-74440550	None:intergenic	40.0%
	AGTTGAACAATAGAATGCCG+AGG	-	chr4_3:74440629-74440648	None:intergenic	40.0%
	CGGCATTCTATTGTTCAACT+TGG	+	chr4_3:74440629-74440648	Msa0662330:three_prime_UTR	40.0%
!	CTTCTTTGGTTTCTTCTGGA+TGG	-	chr4_3:74438704-74438723	None:intergenic	40.0%
!!!	TCATTGGTTTTGGGTTCAAC+AGG	-	chr4_3:74438766-74438785	None:intergenic	40.0%
	TTCCCACCAATCAACTTCAT+TGG	-	chr4_3:74438782-74438801	None:intergenic	40.0%
	TTGATTGGTGGGAATCTTTC+TGG	+	chr4_3:74438788-74438807	Msa0662330:CDS	40.0%
	AAGAGAAGAAACCAAACCTG+GGG	-	chr4_3:74438830-74438849	None:intergenic	40.0%
	TGCCCTTTAATAATGAGGTG+TGG	-	chr4_3:74438990-74439009	None:intergenic	40.0%
	TCGTGGTCCAATTTAATCTC+TGG	-	chr4_3:74439162-74439181	None:intergenic	40.0%
!!	TGGAGACGGTGTTATTGATA+TGG	+	chr4_3:74439229-74439248	Msa0662330:intron	40.0%
	GTACCTAATGATGAGTCACA+AGG	+	chr4_3:74439287-74439306	Msa0662330:CDS	40.0%
	AACCCTTGTGACTCATCATT+AGG	-	chr4_3:74439293-74439312	None:intergenic	40.0%
!	ATGTTGATAAGTCCTGATGG+AGG	-	chr4_3:74439392-74439411	None:intergenic	40.0%
	TGCTATTGCTCTTAGAAGGT+TGG	+	chr4_3:74439445-74439464	Msa0662330:CDS	40.0%
!!!	TCTGGTTTTGAAGCGTTGTA+TGG	+	chr4_3:74439620-74439639	Msa0662330:CDS	40.0%
!	TATGGTTTGCCTAATTGCTG+TGG	+	chr4_3:74439638-74439657	Msa0662330:CDS	40.0%
	TCAATAGCTCCACAGCAATT+AGG	-	chr4_3:74439650-74439669	None:intergenic	40.0%
	CTGTTCAAACCTCAGATGAT+TGG	+	chr4_3:74439699-74439718	Msa0662330:CDS	40.0%
	TTGATCACACCAATCATCTG+AGG	-	chr4_3:74439711-74439730	None:intergenic	40.0%
	ATATTGTGACAGGTTTGCCT+GGG	+	chr4_3:74439789-74439808	Msa0662330:CDS	40.0%
	TTTCAAGCTCTCACAAAACG+GGG	+	chr4_3:74439850-74439869	Msa0662330:CDS	40.0%
	ACAGTTATCCTCTTCTTCCA+TGG	+	chr4_3:74439939-74439958	Msa0662330:CDS	40.0%
	ACGCCTTATGAAACTAGTGT+TGG	+	chr4_3:74439968-74439987	Msa0662330:CDS	40.0%
	GTCTCCACATAACCTTACTA+AGG	-	chr4_3:74440087-74440106	None:intergenic	40.0%
	CAATGCAACCTCTGGATTTA+AGG	-	chr4_3:74440185-74440204	None:intergenic	40.0%
	CTTGCTTGCAATACTGTTCT+CGG	-	chr4_3:74440231-74440250	None:intergenic	40.0%
	TTGGCCAAGCATATACAACA+TGG	+	chr4_3:74440283-74440302	Msa0662330:CDS	40.0%
	GGAATGCAATTAGATGCTCA+TGG	+	chr4_3:74440304-74440323	Msa0662330:CDS	40.0%
!!	AGAATTTGACTTTTGGCCTC+AGG	+	chr4_3:74440356-74440375	Msa0662330:exon	40.0%
	GACATTAGGATTCATTGAGC+TGG	-	chr4_3:74440531-74440550	None:intergenic	40.0%
	AGTTGAACAATAGAATGCCG+AGG	-	chr4_3:74440629-74440648	None:intergenic	40.0%
	CGGCATTCTATTGTTCAACT+TGG	+	chr4_3:74440629-74440648	Msa0662330:three_prime_UTR	40.0%
	AGCTTGACTTCACTGTTCAC+TGG	+	chr4_3:74438627-74438646	Msa0662330:five_prime_UTR	45.0%
	GGAACAACCGAGTCAATCAA+TGG	+	chr4_3:74438675-74438694	Msa0662330:exon	45.0%
!!	ATGGGTGCCATTGATTGACT+CGG	-	chr4_3:74438685-74438704	None:intergenic	45.0%
	TGGGTTCAACAGGAACAACA+AGG	-	chr4_3:74438756-74438775	None:intergenic	45.0%
	CACAAAAATTCTACTGCCCC+AGG	+	chr4_3:74438811-74438830	Msa0662330:CDS	45.0%
	AAATTCTACTGCCCCAGGTT+TGG	+	chr4_3:74438816-74438835	Msa0662330:intron	45.0%
	TTGGGCCGTGAGAAAATCAT+GGG	-	chr4_3:74439051-74439070	None:intergenic	45.0%
	ATTGGGCCGTGAGAAAATCA+TGG	-	chr4_3:74439052-74439071	None:intergenic	45.0%
	TGGACCACGAGAAAATTGTG+AGG	+	chr4_3:74439172-74439191	Msa0662330:intron	45.0%
	GGACCACGAGAAAATTGTGA+GGG	+	chr4_3:74439173-74439192	Msa0662330:intron	45.0%
!	AGTCCCTCACAATTTTCTCG+TGG	-	chr4_3:74439179-74439198	None:intergenic	45.0%
	CATATGTTCTCTTGTGAGGG+AGG	+	chr4_3:74439352-74439371	Msa0662330:CDS	45.0%
	CTCATATCAAGACCTCCATC+AGG	+	chr4_3:74439377-74439396	Msa0662330:CDS	45.0%
	ATCTGGCGAATCTCAAGTCT+CGG	+	chr4_3:74439469-74439488	Msa0662330:CDS	45.0%
!!	GTTGGAGCTTCTTTTGGTGT+TGG	+	chr4_3:74439491-74439510	Msa0662330:CDS	45.0%
	GCGCTAAACGTCATCTGAAT+TGG	+	chr4_3:74439567-74439586	Msa0662330:CDS	45.0%
	TCCTGCATTCTATCGGAATC+AGG	-	chr4_3:74439593-74439612	None:intergenic	45.0%
	ACATGTCGTGATGACACTTC+CGG	+	chr4_3:74439676-74439695	Msa0662330:CDS	45.0%
!	TCATCTGAGGTTTGAACAGC+CGG	-	chr4_3:74439698-74439717	None:intergenic	45.0%
	GATATTGTGACAGGTTTGCC+TGG	+	chr4_3:74439788-74439807	Msa0662330:CDS	45.0%
	TATTGTGACAGGTTTGCCTG+GGG	+	chr4_3:74439790-74439809	Msa0662330:CDS	45.0%
	GTCATAAGCCATGGAAGAAG+AGG	-	chr4_3:74439950-74439969	None:intergenic	45.0%
!	TCATAAGGCGTCATAAGCCA+TGG	-	chr4_3:74439959-74439978	None:intergenic	45.0%
	TGCAAGACTACTTGCAGTGA+GGG	+	chr4_3:74440030-74440049	Msa0662330:CDS	45.0%
!	AGGGCACTTTCACTGTTGAA+GGG	+	chr4_3:74440049-74440068	Msa0662330:CDS	45.0%
	TTTCACTGTTGAAGGGGAGT+TGG	+	chr4_3:74440056-74440075	Msa0662330:CDS	45.0%
	TGGAGACACCTTAAATCCAG+AGG	+	chr4_3:74440174-74440193	Msa0662330:CDS	45.0%
	TGATCAGACAATGCAACCTC+TGG	-	chr4_3:74440193-74440212	None:intergenic	45.0%
!!	TGCAAGCAAGTTGATCCTTC+AGG	+	chr4_3:74440241-74440260	Msa0662330:CDS	45.0%
!!	AGCAAGTTGATCCTTCAGGA+AGG	+	chr4_3:74440245-74440264	Msa0662330:CDS	45.0%
	AAGGACCGTGCGAGAAAATT+TGG	+	chr4_3:74440264-74440283	Msa0662330:CDS	45.0%
!	CTTGGCCAAATTTTCTCGCA+CGG	-	chr4_3:74440272-74440291	None:intergenic	45.0%
	AGCTTGACTTCACTGTTCAC+TGG	+	chr4_3:74438627-74438646	Msa0662330:five_prime_UTR	45.0%
	GGAACAACCGAGTCAATCAA+TGG	+	chr4_3:74438675-74438694	Msa0662330:exon	45.0%
!!	ATGGGTGCCATTGATTGACT+CGG	-	chr4_3:74438685-74438704	None:intergenic	45.0%
	TGGGTTCAACAGGAACAACA+AGG	-	chr4_3:74438756-74438775	None:intergenic	45.0%
	CACAAAAATTCTACTGCCCC+AGG	+	chr4_3:74438811-74438830	Msa0662330:CDS	45.0%
	AAATTCTACTGCCCCAGGTT+TGG	+	chr4_3:74438816-74438835	Msa0662330:intron	45.0%
	TTGGGCCGTGAGAAAATCAT+GGG	-	chr4_3:74439051-74439070	None:intergenic	45.0%
	ATTGGGCCGTGAGAAAATCA+TGG	-	chr4_3:74439052-74439071	None:intergenic	45.0%
	TGGACCACGAGAAAATTGTG+AGG	+	chr4_3:74439172-74439191	Msa0662330:intron	45.0%
	GGACCACGAGAAAATTGTGA+GGG	+	chr4_3:74439173-74439192	Msa0662330:intron	45.0%
!	AGTCCCTCACAATTTTCTCG+TGG	-	chr4_3:74439179-74439198	None:intergenic	45.0%
	CATATGTTCTCTTGTGAGGG+AGG	+	chr4_3:74439352-74439371	Msa0662330:CDS	45.0%
	CTCATATCAAGACCTCCATC+AGG	+	chr4_3:74439377-74439396	Msa0662330:CDS	45.0%
	ATCTGGCGAATCTCAAGTCT+CGG	+	chr4_3:74439469-74439488	Msa0662330:CDS	45.0%
!!	GTTGGAGCTTCTTTTGGTGT+TGG	+	chr4_3:74439491-74439510	Msa0662330:CDS	45.0%
	GCGCTAAACGTCATCTGAAT+TGG	+	chr4_3:74439567-74439586	Msa0662330:CDS	45.0%
	TCCTGCATTCTATCGGAATC+AGG	-	chr4_3:74439593-74439612	None:intergenic	45.0%
	ACATGTCGTGATGACACTTC+CGG	+	chr4_3:74439676-74439695	Msa0662330:CDS	45.0%
!	TCATCTGAGGTTTGAACAGC+CGG	-	chr4_3:74439698-74439717	None:intergenic	45.0%
	GATATTGTGACAGGTTTGCC+TGG	+	chr4_3:74439788-74439807	Msa0662330:CDS	45.0%
	TATTGTGACAGGTTTGCCTG+GGG	+	chr4_3:74439790-74439809	Msa0662330:CDS	45.0%
	GTCATAAGCCATGGAAGAAG+AGG	-	chr4_3:74439950-74439969	None:intergenic	45.0%
!	TCATAAGGCGTCATAAGCCA+TGG	-	chr4_3:74439959-74439978	None:intergenic	45.0%
	TGCAAGACTACTTGCAGTGA+GGG	+	chr4_3:74440030-74440049	Msa0662330:CDS	45.0%
!	AGGGCACTTTCACTGTTGAA+GGG	+	chr4_3:74440049-74440068	Msa0662330:CDS	45.0%
	TTTCACTGTTGAAGGGGAGT+TGG	+	chr4_3:74440056-74440075	Msa0662330:CDS	45.0%
	TGGAGACACCTTAAATCCAG+AGG	+	chr4_3:74440174-74440193	Msa0662330:CDS	45.0%
	TGATCAGACAATGCAACCTC+TGG	-	chr4_3:74440193-74440212	None:intergenic	45.0%
!!	TGCAAGCAAGTTGATCCTTC+AGG	+	chr4_3:74440241-74440260	Msa0662330:CDS	45.0%
!!	AGCAAGTTGATCCTTCAGGA+AGG	+	chr4_3:74440245-74440264	Msa0662330:CDS	45.0%
	AAGGACCGTGCGAGAAAATT+TGG	+	chr4_3:74440264-74440283	Msa0662330:CDS	45.0%
!	CTTGGCCAAATTTTCTCGCA+CGG	-	chr4_3:74440272-74440291	None:intergenic	45.0%
	GCTCTTAGAAGGTTGGCATC+TGG	+	chr4_3:74439452-74439471	Msa0662330:CDS	50.0%
!	GTCTCGGTTGGAGCTTCTTT+TGG	+	chr4_3:74439485-74439504	Msa0662330:CDS	50.0%
!!!	TTTTGGTGTTGGCCAGTCGA+CGG	+	chr4_3:74439502-74439521	Msa0662330:CDS	50.0%
!!	GGTGACTTGGAGGTTTGTTG+AGG	+	chr4_3:74439532-74439551	Msa0662330:CDS	50.0%
	GCCTGATTCCGATAGAATGC+AGG	+	chr4_3:74439589-74439608	Msa0662330:CDS	50.0%
	ATTGTGACAGGTTTGCCTGG+GGG	+	chr4_3:74439791-74439810	Msa0662330:CDS	50.0%
	CGTGAAAATGTCATTCCCCC+AGG	-	chr4_3:74439809-74439828	None:intergenic	50.0%
!!	CAAAACGGGGAGCGTTTGAA+TGG	+	chr4_3:74439863-74439882	Msa0662330:CDS	50.0%
	CTGCAAGACTACTTGCAGTG+AGG	+	chr4_3:74440029-74440048	Msa0662330:CDS	50.0%
!!	GAGGGCACTTTCACTGTTGA+AGG	+	chr4_3:74440048-74440067	Msa0662330:CDS	50.0%
	GGGCACTTTCACTGTTGAAG+GGG	+	chr4_3:74440050-74440069	Msa0662330:CDS	50.0%
	GCTCTTAGAAGGTTGGCATC+TGG	+	chr4_3:74439452-74439471	Msa0662330:CDS	50.0%
!	GTCTCGGTTGGAGCTTCTTT+TGG	+	chr4_3:74439485-74439504	Msa0662330:CDS	50.0%
!!!	TTTTGGTGTTGGCCAGTCGA+CGG	+	chr4_3:74439502-74439521	Msa0662330:CDS	50.0%
!!	GGTGACTTGGAGGTTTGTTG+AGG	+	chr4_3:74439532-74439551	Msa0662330:CDS	50.0%
	GCCTGATTCCGATAGAATGC+AGG	+	chr4_3:74439589-74439608	Msa0662330:CDS	50.0%
	ATTGTGACAGGTTTGCCTGG+GGG	+	chr4_3:74439791-74439810	Msa0662330:CDS	50.0%
	CGTGAAAATGTCATTCCCCC+AGG	-	chr4_3:74439809-74439828	None:intergenic	50.0%
!!	CAAAACGGGGAGCGTTTGAA+TGG	+	chr4_3:74439863-74439882	Msa0662330:CDS	50.0%
	CTGCAAGACTACTTGCAGTG+AGG	+	chr4_3:74440029-74440048	Msa0662330:CDS	50.0%
!!	GAGGGCACTTTCACTGTTGA+AGG	+	chr4_3:74440048-74440067	Msa0662330:CDS	50.0%
	GGGCACTTTCACTGTTGAAG+GGG	+	chr4_3:74440050-74440069	Msa0662330:CDS	50.0%
!	GTCTCAGCTGAAGCTGGTCT+GGG	+	chr4_3:74438654-74438673	Msa0662330:five_prime_UTR	55.0%
	GGCGAATCTCAAGTCTCGGT+TGG	+	chr4_3:74439473-74439492	Msa0662330:CDS	55.0%
	TCACCTGTGAAACCGTCGAC+TGG	-	chr4_3:74439517-74439536	None:intergenic	55.0%
	CGACGGTTTCACAGGTGACT+TGG	+	chr4_3:74439519-74439538	Msa0662330:CDS	55.0%
!	CGGTTTCACAGGTGACTTGG+AGG	+	chr4_3:74439522-74439541	Msa0662330:CDS	55.0%
!!	GAGGTTTGTTGAGGCGCTTG+AGG	+	chr4_3:74439541-74439560	Msa0662330:CDS	55.0%
!	GTCTCAGCTGAAGCTGGTCT+GGG	+	chr4_3:74438654-74438673	Msa0662330:five_prime_UTR	55.0%
	GGCGAATCTCAAGTCTCGGT+TGG	+	chr4_3:74439473-74439492	Msa0662330:CDS	55.0%
	TCACCTGTGAAACCGTCGAC+TGG	-	chr4_3:74439517-74439536	None:intergenic	55.0%
	CGACGGTTTCACAGGTGACT+TGG	+	chr4_3:74439519-74439538	Msa0662330:CDS	55.0%
!	CGGTTTCACAGGTGACTTGG+AGG	+	chr4_3:74439522-74439541	Msa0662330:CDS	55.0%
!!	GAGGTTTGTTGAGGCGCTTG+AGG	+	chr4_3:74439541-74439560	Msa0662330:CDS	55.0%
	GGTCTCGTCTCAGCTGAAGC+TGG	+	chr4_3:74438648-74438667	Msa0662330:five_prime_UTR	60.0%
	CGTCTCAGCTGAAGCTGGTC+TGG	+	chr4_3:74438653-74438672	Msa0662330:five_prime_UTR	60.0%
	TGGCCAGTCGACGGTTTCAC+AGG	+	chr4_3:74439511-74439530	Msa0662330:CDS	60.0%
	TCTCGCACGGTCCTTCCTGA+AGG	-	chr4_3:74440259-74440278	None:intergenic	60.0%
	GGTCTCGTCTCAGCTGAAGC+TGG	+	chr4_3:74438648-74438667	Msa0662330:five_prime_UTR	60.0%
	CGTCTCAGCTGAAGCTGGTC+TGG	+	chr4_3:74438653-74438672	Msa0662330:five_prime_UTR	60.0%
	TGGCCAGTCGACGGTTTCAC+AGG	+	chr4_3:74439511-74439530	Msa0662330:CDS	60.0%
	TCTCGCACGGTCCTTCCTGA+AGG	-	chr4_3:74440259-74440278	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	74438591	74440677	74438591	ID=Msa0662330;Name=Msa0662330
chr4_3	mRNA	74438591	74440677	74438591	ID=Msa0662330-mRNA-1;Parent=Msa0662330;Name=Msa0662330-mRNA-1;_AED=0.00;_eAED=0.00;_QI=103\|1\|1\|1\|1\|1\|2\|320\|405
chr4_3	exon	74438591	74438832	74438591	ID=Msa0662330-mRNA-1:exon:22397;Parent=Msa0662330-mRNA-1
chr4_3	exon	74439279	74440677	74439279	ID=Msa0662330-mRNA-1:exon:22398;Parent=Msa0662330-mRNA-1
chr4_3	five_prime_UTR	74438591	74438693	74438591	ID=Msa0662330-mRNA-1:five_prime_utr;Parent=Msa0662330-mRNA-1
chr4_3	CDS	74438694	74438832	74438694	ID=Msa0662330-mRNA-1:cds;Parent=Msa0662330-mRNA-1
chr4_3	CDS	74439279	74440357	74439279	ID=Msa0662330-mRNA-1:cds;Parent=Msa0662330-mRNA-1
chr4_3	three_prime_UTR	74440358	74440677	74440358	ID=Msa0662330-mRNA-1:three_prime_utr;Parent=Msa0662330-mRNA-1

Gene Sequence

>Msa0662330

ATGGCACCCATCCAGAAGAAACCAAAGAAGAAGACCAAAAAGAAACACAAACAAGTGAGCCTTGTTGTTCCTGTTGAACCCAAAACCAATGAAGTTGATTGGTGGGAATCTTTCTGGCACAAAAATTCTACTGCCCCAGGATACTCAGTACCTAATGATGAGTCACAAGGGTTTAAGTACTTCTTTAGGGTGTCAGAGACTACATTTGAATACATATGTTCTCTTGTGAGGGAGGATCTCATATCAAGACCTCCATCAGGACTTATCAACATTGAAGGAAGGCTTCTTAGTGTTGAGAAGCAAGTTGCTATTGCTCTTAGAAGGTTGGCATCTGGCGAATCTCAAGTCTCGGTTGGAGCTTCTTTTGGTGTTGGCCAGTCGACGGTTTCACAGGTGACTTGGAGGTTTGTTGAGGCGCTTGAGGAACGCGCTAAACGTCATCTGAATTGGCCTGATTCCGATAGAATGCAGGAAATTAAGTCTGGTTTTGAAGCGTTGTATGGTTTGCCTAATTGCTGTGGAGCTATTGATGCAACACATGTCGTGATGACACTTCCGGCTGTTCAAACCTCAGATGATTGGTGTGATCAAGAAAAGAATTACAGCATGTTGTTACAAGGAATTGTTGATCATGAAATGAGATTCATTGATATTGTGACAGGTTTGCCTGGGGGAATGACATTTTCACGATTATTGAAGTGTTCGACATTTTTCAAGCTCTCACAAAACGGGGAGCGTTTGAATGGAAATGTTAGAAATTTAGGTGGAGATGTGATAAGAGAATATGTAGTTGGTGGGTACAGTTATCCTCTTCTTCCATGGCTTATGACGCCTTATGAAACTAGTGTTGGATCAGATTCAATGTCCACTTTTAATCACAAACACGAAGCTGCAAGACTACTTGCAGTGAGGGCACTTTCACTGTTGAAGGGGAGTTGGAAAATCCTTAGTAAGGTTATGTGGAGACCTGATAAAAAGAAATTGCCAAGCATTATCTTGACATGTTGTTTGCTTCATAATATAATTATTGATTGTGGAGACACCTTAAATCCAGAGGTTGCATTGTCTGATCATCATGATTCAGGATACCGAGAACAGTATTGCAAGCAAGTTGATCCTTCAGGAAGGACCGTGCGAGAAAATTTGGCCAAGCATATACAACATGGAATGCAATTAGATGCTCATGGTACTTCTGCTACCTCTGTCCATCTTATTTAG

Protein sequence

>Msa0662330

MAPIQKKPKKKTKKKHKQVSLVVPVEPKTNEVDWWESFWHKNSTAPGYSVPNDESQGFKYFFRVSETTFEYICSLVREDLISRPPSGLINIEGRLLSVEKQVAIALRRLASGESQVSVGASFGVGQSTVSQVTWRFVEALEERAKRHLNWPDSDRMQEIKSGFEALYGLPNCCGAIDATHVVMTLPAVQTSDDWCDQEKNYSMLLQGIVDHEMRFIDIVTGLPGGMTFSRLLKCSTFFKLSQNGERLNGNVRNLGGDVIREYVVGGYSYPLLPWLMTPYETSVGSDSMSTFNHKHEAARLLAVRALSLLKGSWKILSKVMWRPDKKKLPSIILTCCLLHNIIIDCGDTLNPEVALSDHHDSGYREQYCKQVDPSGRTVRENLAKHIQHGMQLDAHGTSATSVHLI*