Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387870 | XP_013466057.1 | 99.558 | 226 | 1 | 0 | 1 | 226 | 1 | 226 | 9.34e-164 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387870 | A0A072VE50 | 99.558 | 226 | 1 | 0 | 1 | 226 | 1 | 226 | 4.46e-164 | 461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa1387870 | 0.806515 | 7.925177e-50 | -8.615850e-47 |
| Msa0003890 | Msa1387870 | 0.804394 | 2.206518e-49 | -8.615850e-47 |
| Msa0010890 | Msa1387870 | 0.818984 | 1.473853e-52 | -8.615850e-47 |
| Msa0012080 | Msa1387870 | 0.826372 | 2.812878e-54 | -8.615850e-47 |
| Msa0017510 | Msa1387870 | 0.818254 | 2.157538e-52 | -8.615850e-47 |
| Msa0021510 | Msa1387870 | 0.810968 | 8.853558e-51 | -8.615850e-47 |
| Msa0024550 | Msa1387870 | 0.834484 | 2.917815e-56 | -8.615850e-47 |
| Msa0026800 | Msa1387870 | 0.809874 | 1.524666e-50 | -8.615850e-47 |
| Msa0027230 | Msa1387870 | 0.801353 | 9.373132e-49 | -8.615850e-47 |
| Msa0027820 | Msa1387870 | 0.834195 | 3.448900e-56 | -8.615850e-47 |
| Msa0028420 | Msa1387870 | 0.801089 | 1.061399e-48 | -8.615850e-47 |
| Msa0032090 | Msa1387870 | 0.810132 | 1.341677e-50 | -8.615850e-47 |
| Msa0032430 | Msa1387870 | 0.808928 | 2.433087e-50 | -8.615850e-47 |
| Msa0032920 | Msa1387870 | -0.811424 | 7.051316e-51 | -8.615850e-47 |
| Msa0032960 | Msa1387870 | -0.801384 | 9.237799e-49 | -8.615850e-47 |
| Msa0047030 | Msa1387870 | 0.817933 | 2.550153e-52 | -8.615850e-47 |
| Msa0047070 | Msa1387870 | 0.814917 | 1.206962e-51 | -8.615850e-47 |
| Msa0050390 | Msa1387870 | 0.805407 | 1.355020e-49 | -8.615850e-47 |
| Msa0063890 | Msa1387870 | 0.979138 | 2.576173e-147 | -8.615850e-47 |
| Msa0075220 | Msa1387870 | 0.809164 | 2.165954e-50 | -8.615850e-47 |
| Msa0078900 | Msa1387870 | 0.829407 | 5.237316e-55 | -8.615850e-47 |
| Msa0079070 | Msa1387870 | 0.809982 | 1.445526e-50 | -8.615850e-47 |
| Msa0079380 | Msa1387870 | 0.803491 | 3.398869e-49 | -8.615850e-47 |
| Msa0080090 | Msa1387870 | 0.803658 | 3.138036e-49 | -8.615850e-47 |
| Msa0089630 | Msa1387870 | 0.825958 | 3.529170e-54 | -8.615850e-47 |
| Msa0090570 | Msa1387870 | 0.807088 | 5.996661e-50 | -8.615850e-47 |
| Msa0092790 | Msa1387870 | 0.812735 | 3.650385e-51 | -8.615850e-47 |
| Msa0101440 | Msa1387870 | 0.978704 | 2.193749e-146 | -8.615850e-47 |
| Msa0110970 | Msa1387870 | 0.803304 | 3.716715e-49 | -8.615850e-47 |
| Msa0120400 | Msa1387870 | 0.846184 | 2.547818e-59 | -8.615850e-47 |
| Msa1360440 | Msa1387870 | 0.809423 | 1.906420e-50 | -8.615850e-47 |
| Msa1366340 | Msa1387870 | 0.802984 | 4.327406e-49 | -8.615850e-47 |
| Msa1369550 | Msa1387870 | 0.834058 | 3.733175e-56 | -8.615850e-47 |
| Msa1375380 | Msa1387870 | 0.806750 | 7.067853e-50 | -8.615850e-47 |
| Msa1387870 | Msa1392240 | 0.833975 | 3.915841e-56 | -8.615850e-47 |
| Msa1387870 | Msa1393570 | 0.823429 | 1.391694e-53 | -8.615850e-47 |
| Msa1387870 | Msa1398340 | 0.808008 | 3.823835e-50 | -8.615850e-47 |
| Msa1387870 | Msa1414520 | 0.818277 | 2.131834e-52 | -8.615850e-47 |
| Msa1387870 | Msa1417420 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa1387870 | Msa1418090 | 0.817077 | 3.975661e-52 | -8.615850e-47 |
| Msa1387870 | Msa1419370 | 0.984188 | 7.733190e-160 | -8.615850e-47 |
| Msa1387870 | Msa1423350 | 0.800406 | 1.463279e-48 | -8.615850e-47 |
| Msa1387870 | Msa1424750 | 0.802701 | 4.951412e-49 | -8.615850e-47 |
| Msa1387870 | Msa1425880 | 0.802933 | 4.434823e-49 | -8.615850e-47 |
| Msa1387870 | Msa1432500 | 0.810885 | 9.227126e-51 | -8.615850e-47 |
| Msa1387870 | Msa1435160 | 0.815103 | 1.097395e-51 | -8.615850e-47 |
| Msa1387870 | Msa1440560 | 0.831797 | 1.361711e-55 | -8.615850e-47 |
| Msa1387870 | Msa1440960 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa1387870 | Msa1445390 | -0.801746 | 7.783969e-49 | -8.615850e-47 |
| Msa1387870 | Msa1446950 | 0.808362 | 3.214456e-50 | -8.615850e-47 |
| Msa1387870 | Msa1449340 | -0.812398 | 4.326572e-51 | -8.615850e-47 |
| Msa1387870 | Msa1464810 | 0.837433 | 5.212974e-57 | -8.615850e-47 |
| Msa1387870 | Msa1466540 | 0.804121 | 2.514312e-49 | -8.615850e-47 |
| Msa0608320 | Msa1387870 | 0.805622 | 1.221535e-49 | -8.615850e-47 |
| Msa0615710 | Msa1387870 | 0.816137 | 6.457392e-52 | -8.615850e-47 |
| Msa0625190 | Msa1387870 | 0.823347 | 1.454549e-53 | -8.615850e-47 |
| Msa0625720 | Msa1387870 | 0.820327 | 7.272611e-53 | -8.615850e-47 |
| Msa0626450 | Msa1387870 | 0.835004 | 2.159932e-56 | -8.615850e-47 |
| Msa0626490 | Msa1387870 | 0.836792 | 7.602728e-57 | -8.615850e-47 |
| Msa0643570 | Msa1387870 | 0.802182 | 6.332873e-49 | -8.615850e-47 |
| Msa0661650 | Msa1387870 | 0.844247 | 8.509495e-59 | -8.615850e-47 |
| Msa0661790 | Msa1387870 | 0.821064 | 4.925019e-53 | -8.615850e-47 |
| Msa0662330 | Msa1387870 | 0.813315 | 2.723860e-51 | -8.615850e-47 |
| Msa0663390 | Msa1387870 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
| Msa0664600 | Msa1387870 | 0.834152 | 3.535196e-56 | -8.615850e-47 |
| Msa0677410 | Msa1387870 | 0.809037 | 2.305922e-50 | -8.615850e-47 |
| Msa0688390 | Msa1387870 | 0.806898 | 6.578752e-50 | -8.615850e-47 |
| Msa0698920 | Msa1387870 | 0.813369 | 2.650339e-51 | -8.615850e-47 |
| Msa0707250 | Msa1387870 | 0.816672 | 4.901727e-52 | -8.615850e-47 |
| Msa0710800 | Msa1387870 | 0.813535 | 2.436645e-51 | -8.615850e-47 |
| Msa0712270 | Msa1387870 | 0.807335 | 5.316409e-50 | -8.615850e-47 |
| Msa0713000 | Msa1387870 | 0.810112 | 1.355449e-50 | -8.615850e-47 |
| Msa0722810 | Msa1387870 | 0.806087 | 9.753251e-50 | -8.615850e-47 |
| Msa0722960 | Msa1387870 | 0.804977 | 1.666841e-49 | -8.615850e-47 |
| Msa0725000 | Msa1387870 | 0.824993 | 5.971088e-54 | -8.615850e-47 |
| Msa0725050 | Msa1387870 | 0.849932 | 2.353809e-60 | -8.615850e-47 |
| Msa0730430 | Msa1387870 | 0.816415 | 5.595223e-52 | -8.615850e-47 |
| Msa0756460 | Msa1387870 | 0.801515 | 8.681324e-49 | -8.615850e-47 |
| Msa0763830 | Msa1387870 | 0.811804 | 5.829451e-51 | -8.615850e-47 |
| Msa0765270 | Msa1387870 | 0.809642 | 1.710690e-50 | -8.615850e-47 |
| Msa0769180 | Msa1387870 | 0.805407 | 1.355169e-49 | -8.615850e-47 |
| Msa0770720 | Msa1387870 | 0.817621 | 2.998245e-52 | -8.615850e-47 |
| Msa0785210 | Msa1387870 | 0.812303 | 4.538219e-51 | -8.615850e-47 |
| Msa0789100 | Msa1387870 | 0.803736 | 3.023573e-49 | -8.615850e-47 |
| Msa0807280 | Msa1387870 | 0.807563 | 4.756109e-50 | -8.615850e-47 |
| Msa0807820 | Msa1387870 | 0.805819 | 1.110142e-49 | -8.615850e-47 |
| Msa0828560 | Msa1387870 | 0.822533 | 2.251685e-53 | -8.615850e-47 |
| Msa0841340 | Msa1387870 | 0.805253 | 1.459703e-49 | -8.615850e-47 |
| Msa0124060 | Msa1387870 | 0.855617 | 5.595275e-62 | -8.615850e-47 |
| Msa0126610 | Msa1387870 | 0.819265 | 1.272089e-52 | -8.615850e-47 |
| Msa0127800 | Msa1387870 | 0.804843 | 1.778162e-49 | -8.615850e-47 |
| Msa0131900 | Msa1387870 | 0.817735 | 2.827096e-52 | -8.615850e-47 |
| Msa0136070 | Msa1387870 | 0.811325 | 7.407061e-51 | -8.615850e-47 |
| Msa0137880 | Msa1387870 | 0.806628 | 7.500451e-50 | -8.615850e-47 |
| Msa0139060 | Msa1387870 | 0.806961 | 6.378896e-50 | -8.615850e-47 |
| Msa0140500 | Msa1387870 | -0.802372 | 5.787650e-49 | -8.615850e-47 |
| Msa0145440 | Msa1387870 | 0.818648 | 1.756907e-52 | -8.615850e-47 |
| Msa0157290 | Msa1387870 | 0.818775 | 1.643769e-52 | -8.615850e-47 |
| Msa0159340 | Msa1387870 | 0.813118 | 3.009111e-51 | -8.615850e-47 |
| Msa0164330 | Msa1387870 | 0.818350 | 2.051744e-52 | -8.615850e-47 |
| Msa0166560 | Msa1387870 | 0.810881 | 9.247375e-51 | -8.615850e-47 |
| Msa0168500 | Msa1387870 | 0.849806 | 2.553208e-60 | -8.615850e-47 |
| Msa0171540 | Msa1387870 | 0.830227 | 3.307210e-55 | -8.615850e-47 |
| Msa0172070 | Msa1387870 | 0.807231 | 5.591068e-50 | -8.615850e-47 |
| Msa0175780 | Msa1387870 | 0.811256 | 7.668400e-51 | -8.615850e-47 |
| Msa0192510 | Msa1387870 | 0.808449 | 3.079893e-50 | -8.615850e-47 |
| Msa0211150 | Msa1387870 | 0.848102 | 7.589145e-60 | -8.615850e-47 |
| Msa0212990 | Msa1387870 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0216910 | Msa1387870 | 0.802583 | 5.237228e-49 | -8.615850e-47 |
| Msa0221470 | Msa1387870 | 0.802884 | 4.539674e-49 | -8.615850e-47 |
| Msa0225100 | Msa1387870 | 0.828528 | 8.550304e-55 | -8.615850e-47 |
| Msa0225680 | Msa1387870 | 0.810531 | 1.100519e-50 | -8.615850e-47 |
| Msa0234600 | Msa1387870 | 0.817464 | 3.252768e-52 | -8.615850e-47 |
| Msa1225700 | Msa1387870 | 0.848448 | 6.089069e-60 | -8.615850e-47 |
| Msa1229500 | Msa1387870 | 0.838182 | 3.347343e-57 | -8.615850e-47 |
| Msa1239920 | Msa1387870 | 0.803765 | 2.982097e-49 | -8.615850e-47 |
| Msa1242670 | Msa1387870 | 0.847101 | 1.430973e-59 | -8.615850e-47 |
| Msa1269480 | Msa1387870 | 0.806877 | 6.643610e-50 | -8.615850e-47 |
| Msa1271990 | Msa1387870 | 0.829316 | 5.509770e-55 | -8.615850e-47 |
| Msa1286800 | Msa1387870 | 0.814981 | 1.168169e-51 | -8.615850e-47 |
| Msa1287460 | Msa1387870 | 0.807393 | 5.165919e-50 | -8.615850e-47 |
| Msa1291890 | Msa1387870 | 0.819568 | 1.084854e-52 | -8.615850e-47 |
| Msa1297230 | Msa1387870 | 0.849960 | 2.312351e-60 | -8.615850e-47 |
| Msa1300970 | Msa1387870 | 0.831147 | 1.968120e-55 | -8.615850e-47 |
| Msa1302830 | Msa1387870 | 0.802749 | 4.840085e-49 | -8.615850e-47 |
| Msa1314650 | Msa1387870 | 0.827332 | 1.658780e-54 | -8.615850e-47 |
| Msa1320410 | Msa1387870 | 0.805639 | 1.211332e-49 | -8.615850e-47 |
| Msa1323710 | Msa1387870 | 0.849316 | 3.497524e-60 | -8.615850e-47 |
| Msa1330420 | Msa1387870 | 0.811011 | 8.663871e-51 | -8.615850e-47 |
| Msa1332070 | Msa1387870 | 0.832496 | 9.145140e-56 | -8.615850e-47 |
| Msa1333480 | Msa1387870 | 0.800480 | 1.413303e-48 | -8.615850e-47 |
| Msa1340470 | Msa1387870 | 0.803637 | 3.170301e-49 | -8.615850e-47 |
| Msa1343430 | Msa1387870 | 0.821403 | 4.114096e-53 | -8.615850e-47 |
| Msa0367870 | Msa1387870 | 0.838502 | 2.769072e-57 | -8.615850e-47 |
| Msa0378720 | Msa1387870 | 0.836799 | 7.571749e-57 | -8.615850e-47 |
| Msa0381610 | Msa1387870 | -0.820951 | 5.229716e-53 | -8.615850e-47 |
| Msa0386090 | Msa1387870 | 0.832451 | 9.382269e-56 | -8.615850e-47 |
| Msa0386850 | Msa1387870 | 0.829591 | 4.724950e-55 | -8.615850e-47 |
| Msa0393080 | Msa1387870 | 0.811240 | 7.728458e-51 | -8.615850e-47 |
| Msa0404190 | Msa1387870 | 0.813824 | 2.104371e-51 | -8.615850e-47 |
| Msa0417880 | Msa1387870 | 0.800505 | 1.396912e-48 | -8.615850e-47 |
| Msa0422850 | Msa1387870 | 0.805864 | 1.086724e-49 | -8.615850e-47 |
| Msa0422930 | Msa1387870 | 0.808716 | 2.701131e-50 | -8.615850e-47 |
| Msa0428080 | Msa1387870 | 0.824141 | 9.480249e-54 | -8.615850e-47 |
| Msa0428150 | Msa1387870 | 0.833665 | 4.681276e-56 | -8.615850e-47 |
| Msa0440400 | Msa1387870 | 0.801964 | 7.021903e-49 | -8.615850e-47 |
| Msa0440750 | Msa1387870 | 0.817510 | 3.176975e-52 | -8.615850e-47 |
| Msa0442830 | Msa1387870 | 0.802827 | 4.663702e-49 | -8.615850e-47 |
| Msa0460590 | Msa1387870 | 0.806681 | 7.310334e-50 | -8.615850e-47 |
| Msa0462500 | Msa1387870 | 0.829083 | 6.277395e-55 | -8.615850e-47 |
| Msa0464380 | Msa1387870 | 0.805831 | 1.104081e-49 | -8.615850e-47 |
| Msa0464680 | Msa1387870 | 0.841723 | 3.997464e-58 | -8.615850e-47 |
| Msa0465410 | Msa1387870 | 0.829918 | 3.933969e-55 | -8.615850e-47 |
| Msa0467490 | Msa1387870 | 0.838281 | 3.155763e-57 | -8.615850e-47 |
| Msa0469030 | Msa1387870 | 0.809466 | 1.865945e-50 | -8.615850e-47 |
| Msa0474520 | Msa1387870 | 0.807430 | 5.073666e-50 | -8.615850e-47 |
| Msa0474730 | Msa1387870 | 0.829741 | 4.345106e-55 | -8.615850e-47 |
| Msa0479170 | Msa1387870 | 0.819449 | 1.154533e-52 | -8.615850e-47 |
| Msa0994950 | Msa1387870 | 0.810354 | 1.201943e-50 | -8.615850e-47 |
| Msa0997370 | Msa1387870 | 0.803725 | 3.039949e-49 | -8.615850e-47 |
| Msa1014540 | Msa1387870 | 0.807050 | 6.107263e-50 | -8.615850e-47 |
| Msa1017430 | Msa1387870 | 0.810936 | 8.997380e-51 | -8.615850e-47 |
| Msa1019000 | Msa1387870 | 0.811327 | 7.400203e-51 | -8.615850e-47 |
| Msa1019430 | Msa1387870 | 0.815831 | 7.555683e-52 | -8.615850e-47 |
| Msa1019470 | Msa1387870 | 0.808055 | 3.737518e-50 | -8.615850e-47 |
| Msa1020510 | Msa1387870 | 0.825153 | 5.473310e-54 | -8.615850e-47 |
| Msa1020670 | Msa1387870 | 0.819406 | 1.181069e-52 | -8.615850e-47 |
| Msa1023500 | Msa1387870 | 0.815332 | 9.761320e-52 | -8.615850e-47 |
| Msa1029250 | Msa1387870 | 0.825758 | 3.936998e-54 | -8.615850e-47 |
| Msa1035970 | Msa1387870 | 0.801125 | 1.043540e-48 | -8.615850e-47 |
| Msa1037420 | Msa1387870 | 0.808071 | 3.707615e-50 | -8.615850e-47 |
| Msa1045140 | Msa1387870 | 0.817615 | 3.007480e-52 | -8.615850e-47 |
| Msa1046460 | Msa1387870 | 0.804697 | 1.907469e-49 | -8.615850e-47 |
| Msa1051830 | Msa1387870 | 0.815791 | 7.714766e-52 | -8.615850e-47 |
| Msa1065390 | Msa1387870 | 0.806827 | 6.808530e-50 | -8.615850e-47 |
| Msa1079230 | Msa1387870 | 0.802085 | 6.632319e-49 | -8.615850e-47 |
| Msa1084960 | Msa1387870 | 0.821444 | 4.024110e-53 | -8.615850e-47 |
| Msa1089940 | Msa1387870 | 0.823225 | 1.552920e-53 | -8.615850e-47 |
| Msa1101090 | Msa1387870 | 0.815071 | 1.115202e-51 | -8.615850e-47 |
| Msa1101710 | Msa1387870 | 0.816542 | 5.240855e-52 | -8.615850e-47 |
| Msa1101720 | Msa1387870 | 0.811848 | 5.702381e-51 | -8.615850e-47 |
| Msa1101760 | Msa1387870 | 0.807979 | 3.879194e-50 | -8.615850e-47 |
| Msa1104090 | Msa1387870 | 0.833834 | 4.245912e-56 | -8.615850e-47 |
| Msa1104370 | Msa1387870 | 0.800547 | 1.369185e-48 | -8.615850e-47 |
| Msa1106700 | Msa1387870 | 0.804255 | 2.358135e-49 | -8.615850e-47 |
| Msa0261340 | Msa1387870 | 0.818111 | 2.324368e-52 | -8.615850e-47 |
| Msa0262340 | Msa1387870 | 0.806933 | 6.466753e-50 | -8.615850e-47 |
| Msa0266180 | Msa1387870 | 0.838505 | 2.764020e-57 | -8.615850e-47 |
| Msa0267110 | Msa1387870 | 0.822016 | 2.967710e-53 | -8.615850e-47 |
| Msa0267370 | Msa1387870 | 0.802234 | 6.180544e-49 | -8.615850e-47 |
| Msa0272490 | Msa1387870 | 0.802501 | 5.445325e-49 | -8.615850e-47 |
| Msa0279700 | Msa1387870 | 0.802292 | 6.011269e-49 | -8.615850e-47 |
| Msa0287740 | Msa1387870 | 0.824311 | 8.645129e-54 | -8.615850e-47 |
| Msa0290720 | Msa1387870 | 0.818821 | 1.604852e-52 | -8.615850e-47 |
| Msa0292400 | Msa1387870 | 0.849955 | 2.319262e-60 | -8.615850e-47 |
| Msa0300690 | Msa1387870 | 0.812239 | 4.685163e-51 | -8.615850e-47 |
| Msa0312700 | Msa1387870 | 0.801559 | 8.505681e-49 | -8.615850e-47 |
| Msa0337620 | Msa1387870 | 0.809459 | 1.872372e-50 | -8.615850e-47 |
| Msa0337700 | Msa1387870 | 0.815847 | 7.496493e-52 | -8.615850e-47 |
| Msa0339480 | Msa1387870 | 0.818649 | 1.755938e-52 | -8.615850e-47 |
| Msa0339500 | Msa1387870 | 0.800350 | 1.502188e-48 | -8.615850e-47 |
| Msa0357340 | Msa1387870 | 0.812180 | 4.826496e-51 | -8.615850e-47 |
| Msa0363070 | Msa1387870 | 0.808995 | 2.354646e-50 | -8.615850e-47 |
| Msa0363200 | Msa1387870 | 0.817395 | 3.371915e-52 | -8.615850e-47 |
| Msa1111090 | Msa1387870 | 0.802693 | 4.969242e-49 | -8.615850e-47 |
| Msa1111130 | Msa1387870 | 0.818366 | 2.035593e-52 | -8.615850e-47 |
| Msa1113340 | Msa1387870 | 0.841258 | 5.299219e-58 | -8.615850e-47 |
| Msa1121490 | Msa1387870 | 0.816507 | 5.336435e-52 | -8.615850e-47 |
| Msa1123380 | Msa1387870 | 0.808514 | 2.984011e-50 | -8.615850e-47 |
| Msa1124110 | Msa1387870 | 0.811949 | 5.419502e-51 | -8.615850e-47 |
| Msa1137570 | Msa1387870 | 0.809379 | 1.948486e-50 | -8.615850e-47 |
| Msa1140210 | Msa1387870 | 0.823126 | 1.637795e-53 | -8.615850e-47 |
| Msa1147740 | Msa1387870 | 0.807725 | 4.392972e-50 | -8.615850e-47 |
| Msa1155170 | Msa1387870 | -0.801840 | 7.448484e-49 | -8.615850e-47 |
| Msa1162780 | Msa1387870 | 0.810726 | 9.986260e-51 | -8.615850e-47 |
| Msa1167340 | Msa1387870 | 0.817303 | 3.536293e-52 | -8.615850e-47 |
| Msa1168950 | Msa1387870 | 0.811962 | 5.383759e-51 | -8.615850e-47 |
| Msa1171710 | Msa1387870 | 0.833026 | 6.753552e-56 | -8.615850e-47 |
| Msa1183120 | Msa1387870 | 0.806968 | 6.356847e-50 | -8.615850e-47 |
| Msa1192090 | Msa1387870 | 0.829866 | 4.050629e-55 | -8.615850e-47 |
| Msa1203710 | Msa1387870 | 0.802613 | 5.163208e-49 | -8.615850e-47 |
| Msa1205280 | Msa1387870 | 0.824745 | 6.834690e-54 | -8.615850e-47 |
| Msa1209460 | Msa1387870 | 0.818669 | 1.737521e-52 | -8.615850e-47 |
| Msa1211230 | Msa1387870 | -0.803132 | 4.033973e-49 | -8.615850e-47 |
| Msa1215050 | Msa1387870 | 0.818372 | 2.028321e-52 | -8.615850e-47 |
| Msa1223470 | Msa1387870 | 0.802915 | 4.472184e-49 | -8.615850e-47 |
| Msa0487420 | Msa1387870 | 0.828779 | 7.434584e-55 | -8.615850e-47 |
| Msa0498060 | Msa1387870 | 0.815224 | 1.031513e-51 | -8.615850e-47 |
| Msa0509710 | Msa1387870 | 0.828569 | 8.360145e-55 | -8.615850e-47 |
| Msa0511270 | Msa1387870 | 0.830912 | 2.248371e-55 | -8.615850e-47 |
| Msa0511370 | Msa1387870 | 0.819170 | 1.336882e-52 | -8.615850e-47 |
| Msa0529890 | Msa1387870 | 0.817592 | 3.045009e-52 | -8.615850e-47 |
| Msa0569200 | Msa1387870 | 0.808101 | 3.654158e-50 | -8.615850e-47 |
| Msa0572840 | Msa1387870 | 0.816857 | 4.454432e-52 | -8.615850e-47 |
| Msa0585560 | Msa1387870 | 0.810486 | 1.125617e-50 | -8.615850e-47 |
| Msa0602240 | Msa1387870 | 0.802486 | 5.484522e-49 | -8.615850e-47 |
| Msa0602250 | Msa1387870 | 0.801953 | 7.058825e-49 | -8.615850e-47 |
| Msa0845110 | Msa1387870 | 0.819769 | 9.758614e-53 | -8.615850e-47 |
| Msa0871260 | Msa1387870 | 0.808252 | 3.393481e-50 | -8.615850e-47 |
| Msa0875290 | Msa1387870 | 0.825438 | 4.687759e-54 | -8.615850e-47 |
| Msa0876190 | Msa1387870 | 0.825921 | 3.600133e-54 | -8.615850e-47 |
| Msa0880140 | Msa1387870 | 0.810945 | 8.955396e-51 | -8.615850e-47 |
| Msa0892120 | Msa1387870 | 0.806774 | 6.986732e-50 | -8.615850e-47 |
| Msa0897330 | Msa1387870 | 0.810205 | 1.293850e-50 | -8.615850e-47 |
| Msa0925180 | Msa1387870 | 0.812794 | 3.543060e-51 | -8.615850e-47 |
| Msa0938480 | Msa1387870 | 0.806716 | 7.185728e-50 | -8.615850e-47 |
| Msa0945110 | Msa1387870 | 0.856018 | 4.272554e-62 | -8.615850e-47 |
| Msa0947660 | Msa1387870 | 0.808600 | 2.860478e-50 | -8.615850e-47 |
| Msa0959140 | Msa1387870 | 0.804772 | 1.840074e-49 | -8.615850e-47 |
| Msa0967380 | Msa1387870 | 0.831406 | 1.699820e-55 | -8.615850e-47 |
| Msa0967870 | Msa1387870 | 0.825339 | 4.947770e-54 | -8.615850e-47 |
| Msa0974080 | Msa1387870 | 0.802573 | 5.261157e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387870 | MtrunA17_Chr1g0154621 | 99.558 | 226 | 1 | 0 | 1 | 226 | 1 | 226 | 8.59e-168 | 461 |
| Msa1387870 | MtrunA17_Chr3g0141391 | 83.190 | 232 | 32 | 4 | 1 | 226 | 1 | 231 | 1.67e-135 | 379 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387870 | AT1G19330.2 | 76.856 | 229 | 48 | 4 | 1 | 226 | 1 | 227 | 1.07e-110 | 318 |
| Msa1387870 | AT1G19330.3 | 71.489 | 235 | 56 | 6 | 1 | 226 | 1 | 233 | 4.81e-109 | 313 |
| Msa1387870 | AT1G19330.1 | 75.641 | 234 | 47 | 5 | 1 | 226 | 1 | 232 | 8.96e-109 | 313 |
| Msa1387870 | AT1G75060.1 | 69.907 | 216 | 61 | 4 | 11 | 223 | 17 | 231 | 5.04e-100 | 290 |
| Msa1387870 | AT1G75060.2 | 69.444 | 216 | 61 | 5 | 11 | 223 | 17 | 230 | 3.66e-98 | 286 |
| Msa1387870 | AT1G75060.3 | 69.143 | 175 | 50 | 4 | 11 | 182 | 17 | 190 | 3.85e-73 | 221 |
Find 89 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATACCAAAGTTGTTGTTAC+TGG | 0.247333 | tig0020980:-80548 | Msa1387870:CDS |
| GAAGGTTGACTTGAGCAAAT+TGG | 0.273443 | tig0020980:-79223 | Msa1387870:CDS |
| CCTAATGATCTAAGCATTCT+TGG | 0.306623 | tig0020980:+79435 | None:intergenic |
| CATCTGGCATGGATCAGATA+TGG | 0.313436 | tig0020980:-79588 | Msa1387870:CDS |
| AGCTGCTCTTTCGATGGGTT+TGG | 0.323968 | tig0020980:+79068 | None:intergenic |
| CCAAGAATGCTTAGATCATT+AGG | 0.330483 | tig0020980:-79435 | Msa1387870:CDS |
| GATGAGTTGCAAGTTATTAG+AGG | 0.336175 | tig0020980:-78521 | Msa1387870:CDS |
| ACCTTGTGACTTGAATCTTC+AGG | 0.338337 | tig0020980:-78243 | Msa1387870:three_prime_UTR |
| CATTACTAAGTAGTATCTTT+CGG | 0.377739 | tig0020980:-78350 | Msa1387870:three_prime_UTR |
| TTGGTCTTGGTGGTTGGCAT+TGG | 0.389653 | tig0020980:-80469 | Msa1387870:CDS |
| TCTTGGTGGTTGGCATTGGC+TGG | 0.391104 | tig0020980:-80465 | Msa1387870:intron |
| CTCTGTTGATTCACAGTCCA+AGG | 0.394816 | tig0020980:-79382 | Msa1387870:CDS |
| GAGGAGTGGTGGGTGGATAG+AGG | 0.395109 | tig0020980:+80814 | None:intergenic |
| TGTCTGCATTGTGGAGATAT+TGG | 0.404430 | tig0020980:-79197 | Msa1387870:CDS |
| TGAATTGTGTAGTGTGGAAT+TGG | 0.405778 | tig0020980:-78098 | Msa1387870:three_prime_UTR |
| TGGAAATAACCGTACTAAAT+CGG | 0.406762 | tig0020980:-80528 | Msa1387870:CDS |
| TCGGTTCTTGTTGGTCTTCG+TGG | 0.407495 | tig0020980:-80509 | Msa1387870:CDS |
| TCAAAGCTGCAAAGAGGCTT+AGG | 0.412016 | tig0020980:-78493 | Msa1387870:CDS |
| TTAGTAGTAGGTTGATTAAG+AGG | 0.413082 | tig0020980:-78320 | Msa1387870:three_prime_UTR |
| GGGGTCAATTTCTATGCCTC+AGG | 0.418506 | tig0020980:-79361 | Msa1387870:CDS |
| GTTAAGAAAGCTGTTGGTCT+TGG | 0.432909 | tig0020980:-80482 | Msa1387870:CDS |
| CCTTGTGACTTGAATCTTCA+GGG | 0.441569 | tig0020980:-78242 | Msa1387870:three_prime_UTR |
| TTCGGATCTCAATTAGTAGT+AGG | 0.443097 | tig0020980:-78332 | Msa1387870:three_prime_UTR |
| AGAGAATGAAGAGGAGTGGT+GGG | 0.448953 | tig0020980:+80804 | None:intergenic |
| ATTGAAAATGTTGGAAGCAA+TGG | 0.458146 | tig0020980:-80657 | Msa1387870:exon |
| ATTTCCAGTAACAACAACTT+TGG | 0.459498 | tig0020980:+80544 | None:intergenic |
| CGTACTAAATCGGTTCTTGT+TGG | 0.461204 | tig0020980:-80518 | Msa1387870:CDS |
| AAGAAAGCTGTTGGTCTTGG+TGG | 0.462904 | tig0020980:-80479 | Msa1387870:CDS |
| CTTGCTGCTCACATGGGAAG+TGG | 0.465516 | tig0020980:-78181 | Msa1387870:three_prime_UTR |
| AAGAGAATGAAGAGGAGTGG+TGG | 0.470329 | tig0020980:+80803 | None:intergenic |
| CATTCTTGGCCTTGATCTGT+AGG | 0.480531 | tig0020980:+79449 | None:intergenic |
| TTGAATTTGAAAATACCATC+TGG | 0.487944 | tig0020980:-79604 | Msa1387870:CDS |
| CAGCTTCACTTCAATACCAT+TGG | 0.494520 | tig0020980:+79685 | None:intergenic |
| AGGCATAGAAATTGACCCCT+TGG | 0.495573 | tig0020980:+79365 | None:intergenic |
| TAATGTACTTGCTGCTCACA+TGG | 0.497237 | tig0020980:-78188 | Msa1387870:three_prime_UTR |
| CTACGAGCTGCTCTTTCGAT+GGG | 0.498457 | tig0020980:+79063 | None:intergenic |
| GTCATCGTCTTCCTCGAGAC+CGG | 0.501405 | tig0020980:+79628 | None:intergenic |
| TCTACGAGCTGCTCTTTCGA+TGG | 0.503645 | tig0020980:+79062 | None:intergenic |
| TCTGTTGATTCACAGTCCAA+GGG | 0.503809 | tig0020980:-79381 | Msa1387870:CDS |
| CACAAAAGTCCTACAGATCA+AGG | 0.510418 | tig0020980:-79458 | Msa1387870:CDS |
| ATCTGGCATGGATCAGATAT+GGG | 0.529761 | tig0020980:-79587 | Msa1387870:intron |
| TTCTATGCCTCAGGGGTGGA+CGG | 0.534012 | tig0020980:-79352 | Msa1387870:intron |
| TTGGTTTGTGCATCGACGCA+TGG | 0.534807 | tig0020980:-78079 | Msa1387870:three_prime_UTR |
| TTGCTGCTCACATGGGAAGT+GGG | 0.537063 | tig0020980:-78180 | Msa1387870:three_prime_UTR |
| AGTGTGATTGAACCACCAAC+CGG | 0.537912 | tig0020980:-79647 | Msa1387870:CDS |
| ATATGAATATCCACTTCCCT+TGG | 0.541035 | tig0020980:-78392 | Msa1387870:three_prime_UTR |
| TTACATGGTACCAAGGGAAG+TGG | 0.541130 | tig0020980:+78382 | None:intergenic |
| GAATGAAGAGGAGTGGTGGG+TGG | 0.541696 | tig0020980:+80807 | None:intergenic |
| ATAGATCGAAACTGTGATCA+TGG | 0.542305 | tig0020980:+80730 | None:intergenic |
| GATCATTAGGATCATCTCAC+AGG | 0.547105 | tig0020980:-79422 | Msa1387870:CDS |
| TCAGAGGCATTTCATGTCGC+AGG | 0.548273 | tig0020980:-79033 | Msa1387870:intron |
| AAGCTGCAAAGAGGCTTAGG+AGG | 0.549495 | tig0020980:-78490 | Msa1387870:CDS |
| ACATTATAATCAAAAGCTAA+AGG | 0.551860 | tig0020980:+78205 | None:intergenic |
| TTTGAAAATACCATCTGGCA+TGG | 0.557029 | tig0020980:-79599 | Msa1387870:CDS |
| CAACAAGAACCGATTTAGTA+CGG | 0.559704 | tig0020980:+80519 | None:intergenic |
| ATATTGGCGACACTTCAATC+TGG | 0.569350 | tig0020980:-79181 | Msa1387870:intron |
| AAGCTGTTGGTCTTGGTGGT+TGG | 0.570137 | tig0020980:-80475 | Msa1387870:CDS |
| AATGTGCAGGTTCTTACCAA+TGG | 0.571599 | tig0020980:-79701 | Msa1387870:intron |
| GAGAGAGAAAGAGAATGAAG+AGG | 0.571656 | tig0020980:+80795 | None:intergenic |
| CCCTGAAGATTCAAGTCACA+AGG | 0.571889 | tig0020980:+78242 | None:intergenic |
| TCTTCCTCGAGACCGGTTGG+TGG | 0.579056 | tig0020980:+79635 | None:intergenic |
| GCAATGGAAAGTTCAGTGAA+TGG | 0.583506 | tig0020980:-80641 | Msa1387870:CDS |
| AGAAAGAGAATGAAGAGGAG+TGG | 0.587556 | tig0020980:+80800 | None:intergenic |
| GGGTCAATTTCTATGCCTCA+GGG | 0.589986 | tig0020980:-79360 | Msa1387870:CDS |
| CATATCTGATCCATGCCAGA+TGG | 0.593266 | tig0020980:+79589 | None:intergenic |
| AAATATATTACATGGTACCA+AGG | 0.594090 | tig0020980:+78375 | None:intergenic |
| GGTGTTGTTAAGAAAGCTGT+TGG | 0.600631 | tig0020980:-80488 | Msa1387870:CDS |
| TCGTCTTCCTCGAGACCGGT+TGG | 0.600634 | tig0020980:+79632 | None:intergenic |
| CAATTTCTATGCCTCAGGGG+TGG | 0.610942 | tig0020980:-79356 | Msa1387870:CDS |
| TAGTGATGATCATGCATTGA+GGG | 0.612578 | tig0020980:+80753 | None:intergenic |
| TGAACCACCAACCGGTCTCG+AGG | 0.615263 | tig0020980:-79639 | Msa1387870:CDS |
| CATGAATGAATTGTGTAGTG+TGG | 0.619979 | tig0020980:-78104 | Msa1387870:three_prime_UTR |
| GTATTGAAGTGAAGCTGCAG+AGG | 0.621922 | tig0020980:-79679 | Msa1387870:CDS |
| TTCATTCATGAGAATAAACA+AGG | 0.622932 | tig0020980:+78117 | None:intergenic |
| AATATATTACATGGTACCAA+GGG | 0.622945 | tig0020980:+78376 | None:intergenic |
| GGACTGTGAATCAACAGAGA+AGG | 0.625537 | tig0020980:+79386 | None:intergenic |
| GATTTGTCAAAGCTGCAAAG+AGG | 0.634961 | tig0020980:-78499 | Msa1387870:CDS |
| GTAATGCTAAATATATTACA+TGG | 0.637984 | tig0020980:+78367 | None:intergenic |
| ATGGAAAGTTCAGTGAATGG+TGG | 0.641018 | tig0020980:-80638 | Msa1387870:CDS |
| AATGTACTTGCTGCTCACAT+GGG | 0.650448 | tig0020980:-78187 | Msa1387870:three_prime_UTR |
| AGCTCGTAGATGTTGTTCAG+AGG | 0.657397 | tig0020980:-79049 | Msa1387870:CDS |
| AATTGGAAATGTCTGCATTG+TGG | 0.659073 | tig0020980:-79206 | Msa1387870:CDS |
| TATACACATTCACAAGTCTG+AGG | 0.678875 | tig0020980:+78154 | None:intergenic |
| GTTAGTGAGAGACAGTGCAG+AGG | 0.678948 | tig0020980:+80856 | None:intergenic |
| CTGTTGATTCACAGTCCAAG+GGG | 0.680824 | tig0020980:-79380 | Msa1387870:CDS |
| ACAACAACTTTGGTATGACG+AGG | 0.693978 | tig0020980:+80554 | None:intergenic |
| ATATATACCGTCCACCCCTG+AGG | 0.713549 | tig0020980:+79345 | None:intergenic |
| GGTCAATTTCTATGCCTCAG+GGG | 0.731555 | tig0020980:-79359 | Msa1387870:CDS |
| GTAGTGATGATCATGCATTG+AGG | 0.753546 | tig0020980:+80752 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTATCATCAAAAT+TGG | - | tig0020980:78504-78523 | Msa1387870:CDS | 10.0% |
| !!! | AATTATACATTTTTAAGTAT+TGG | - | tig0020980:78695-78714 | Msa1387870:intron | 10.0% |
| !!! | ATTATACATTTTTAAGTATT+GGG | - | tig0020980:78696-78715 | Msa1387870:intron | 10.0% |
| !!! | AGTTTTTTTCATATTTTATT+TGG | - | tig0020980:79096-79115 | Msa1387870:intron | 10.0% |
| !!! | TTTGAAAATATTTAATTTTG+AGG | + | tig0020980:80220-80239 | None:intergenic | 10.0% |
| !!! | CAAAATTAAATATTTTCAAA+TGG | - | tig0020980:80220-80239 | Msa1387870:intron | 10.0% |
| !! | AAAAAAAATCAAAACTTTGA+AGG | + | tig0020980:78237-78256 | None:intergenic | 15.0% |
| !! | TAGGAAAATTTGAATAAAAT+TGG | + | tig0020980:78957-78976 | None:intergenic | 15.0% |
| !!! | AGATTTTTACTCTTTAAAAT+AGG | + | tig0020980:78976-78995 | None:intergenic | 15.0% |
| !!! | TTTTCATTGATTGAAAATGT+TGG | - | tig0020980:78260-78279 | Msa1387870:three_prime_UTR | 20.0% |
| !! | TATTGTTGTGGAAAAAAAAT+TGG | - | tig0020980:78720-78739 | Msa1387870:intron | 20.0% |
| !!! | TGGAAAAAAAATTGGATTTT+TGG | - | tig0020980:78728-78747 | Msa1387870:intron | 20.0% |
| !!! | TTTGGTTTTTGTAATTTGAA+TGG | - | tig0020980:78746-78765 | Msa1387870:intron | 20.0% |
| !! | AATGGAGCTTAATTTATTTA+TGG | - | tig0020980:78764-78783 | Msa1387870:intron | 20.0% |
| !! | TAAGCTTAAACATCAAAATT+GGG | - | tig0020980:79816-79835 | Msa1387870:intron | 20.0% |
| !!! | TTCAGTAAATTCTTTTACTA+GGG | + | tig0020980:80195-80214 | None:intergenic | 20.0% |
| !!! | ATTCAGTAAATTCTTTTACT+AGG | + | tig0020980:80196-80215 | None:intergenic | 20.0% |
| !! | GTAATGCTAAATATATTACA+TGG | + | tig0020980:80562-80581 | None:intergenic | 20.0% |
| !! | ACATTATAATCAAAAGCTAA+AGG | + | tig0020980:80724-80743 | None:intergenic | 20.0% |
| ! | TTCAATTGCTCAATTCATTT+GGG | - | tig0020980:78663-78682 | Msa1387870:intron | 25.0% |
| ! | GCTTAATTTATTTATGGATC+TGG | - | tig0020980:78770-78789 | Msa1387870:intron | 25.0% |
| !! | TGCTTGATTTTGAATTTTGA+TGG | - | tig0020980:78831-78850 | Msa1387870:intron | 25.0% |
| !!! | TTTTGAATTTTGATGGTCAA+TGG | - | tig0020980:78838-78857 | Msa1387870:intron | 25.0% |
| !! | AGATGGTATTTTCAAATTCA+AGG | + | tig0020980:79323-79342 | None:intergenic | 25.0% |
| ! | TTGAATTTGAAAATACCATC+TGG | - | tig0020980:79322-79341 | Msa1387870:intron | 25.0% |
| ! | TATTGAAAATATCGTGTAGA+AGG | - | tig0020980:79685-79704 | Msa1387870:CDS | 25.0% |
| !!! | GTTATTTGACGTATCTTTTT+TGG | - | tig0020980:79775-79794 | Msa1387870:intron | 25.0% |
| ! | GTAAGCTTAAACATCAAAAT+TGG | - | tig0020980:79815-79834 | Msa1387870:intron | 25.0% |
| !! | TCAGTAAATTCTTTTACTAG+GGG | + | tig0020980:80194-80213 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTATGAAGCAAA+TGG | - | tig0020980:80383-80402 | Msa1387870:intron | 25.0% |
| ! | AATATATTACATGGTACCAA+GGG | + | tig0020980:80553-80572 | None:intergenic | 25.0% |
| ! | AAATATATTACATGGTACCA+AGG | + | tig0020980:80554-80573 | None:intergenic | 25.0% |
| ! | CATTACTAAGTAGTATCTTT+CGG | - | tig0020980:80576-80595 | Msa1387870:CDS | 25.0% |
| ! | TTCATTCATGAGAATAAACA+AGG | + | tig0020980:80812-80831 | None:intergenic | 25.0% |
| ATTGAAAATGTTGGAAGCAA+TGG | - | tig0020980:78269-78288 | Msa1387870:three_prime_UTR | 30.0% | |
| !! | CAACATTTTCAAAGCTTTGT+TGG | - | tig0020980:78318-78337 | Msa1387870:three_prime_UTR | 30.0% |
| ATTTCCAGTAACAACAACTT+TGG | + | tig0020980:78385-78404 | None:intergenic | 30.0% | |
| TGGAAATAACCGTACTAAAT+CGG | - | tig0020980:78398-78417 | Msa1387870:three_prime_UTR | 30.0% | |
| CTTCAATTGCTCAATTCATT+TGG | - | tig0020980:78662-78681 | Msa1387870:intron | 30.0% | |
| !! | TAAGTATTGGGTTATTGTTG+TGG | - | tig0020980:78708-78727 | Msa1387870:intron | 30.0% |
| TCATACAATTGTTGCATGTA+TGG | - | tig0020980:79178-79197 | Msa1387870:intron | 30.0% | |
| TTGTTTCATGAAAAATGTGC+AGG | - | tig0020980:79212-79231 | Msa1387870:CDS | 30.0% | |
| ATATGGGTGAGTTTCAATTT+GGG | - | tig0020980:79355-79374 | Msa1387870:CDS | 30.0% | |
| GGTACATTATTGTTTGCATT+AGG | - | tig0020980:79914-79933 | Msa1387870:intron | 30.0% | |
| GTTCCTGTAACAATGTTATT+TGG | - | tig0020980:79969-79988 | Msa1387870:intron | 30.0% | |
| CAACCAAATAACATTGTTAC+AGG | + | tig0020980:79975-79994 | None:intergenic | 30.0% | |
| ! | AGTAAATTCTTTTACTAGGG+GGG | + | tig0020980:80192-80211 | None:intergenic | 30.0% |
| ! | CAGTAAATTCTTTTACTAGG+GGG | + | tig0020980:80193-80212 | None:intergenic | 30.0% |
| !! | TTAGTAGTAGGTTGATTAAG+AGG | - | tig0020980:80606-80625 | Msa1387870:CDS | 30.0% |
| !! | CACCTAGTTTTTATGTAGAT+AGG | - | tig0020980:80658-80677 | Msa1387870:exon | 30.0% |
| AGCCTATCTACATAAAAACT+AGG | + | tig0020980:80663-80682 | None:intergenic | 30.0% | |
| AGGAGAGAGAGAAGAAAAAT+GGG | + | tig0020980:78095-78114 | None:intergenic | 35.0% | |
| TAGTGATGATCATGCATTGA+GGG | + | tig0020980:78176-78195 | None:intergenic | 35.0% | |
| ATAGATCGAAACTGTGATCA+TGG | + | tig0020980:78199-78218 | None:intergenic | 35.0% | |
| ! | CATACCAAAGTTGTTGTTAC+TGG | - | tig0020980:78378-78397 | Msa1387870:three_prime_UTR | 35.0% |
| ! | CAACAAGAACCGATTTAGTA+CGG | + | tig0020980:78410-78429 | None:intergenic | 35.0% |
| !! | GATCTTTGCAACTCACTTTT+TGG | - | tig0020980:78873-78892 | Msa1387870:intron | 35.0% |
| !!! | TGCAACTCACTTTTTGGTTT+TGG | - | tig0020980:78879-78898 | Msa1387870:intron | 35.0% |
| TTTGAAAATACCATCTGGCA+TGG | - | tig0020980:79327-79346 | Msa1387870:intron | 35.0% | |
| GATATGGGTGAGTTTCAATT+TGG | - | tig0020980:79354-79373 | Msa1387870:CDS | 35.0% | |
| CACAAACAAAATCAGCAATC+GGG | + | tig0020980:79418-79437 | None:intergenic | 35.0% | |
| GCACAAACAAAATCAGCAAT+CGG | + | tig0020980:79419-79438 | None:intergenic | 35.0% | |
| CCTAATGATCTAAGCATTCT+TGG | + | tig0020980:79494-79513 | None:intergenic | 35.0% | |
| CCAAGAATGCTTAGATCATT+AGG | - | tig0020980:79491-79510 | Msa1387870:intron | 35.0% | |
| AATTGGAAATGTCTGCATTG+TGG | - | tig0020980:79720-79739 | Msa1387870:intron | 35.0% | |
| AACATCAAAATTGGGTATGC+AGG | - | tig0020980:79824-79843 | Msa1387870:intron | 35.0% | |
| ATTTGGTTGAACACTGTATG+TGG | - | tig0020980:79986-80005 | Msa1387870:intron | 35.0% | |
| TATGTGGTTCCAATCAGATT+TGG | - | tig0020980:80002-80021 | Msa1387870:intron | 35.0% | |
| GATGAGTTGCAAGTTATTAG+AGG | - | tig0020980:80405-80424 | Msa1387870:intron | 35.0% | |
| ATATGAATATCCACTTCCCT+TGG | - | tig0020980:80534-80553 | Msa1387870:CDS | 35.0% | |
| TTCGGATCTCAATTAGTAGT+AGG | - | tig0020980:80594-80613 | Msa1387870:CDS | 35.0% | |
| ! | GAATCTTCAGGGATGTTTTA+AGG | - | tig0020980:80695-80714 | Msa1387870:five_prime_UTR | 35.0% |
| TATACACATTCACAAGTCTG+AGG | + | tig0020980:80775-80794 | None:intergenic | 35.0% | |
| CATGAATGAATTGTGTAGTG+TGG | - | tig0020980:80822-80841 | Msa1387870:five_prime_UTR | 35.0% | |
| TGAATTGTGTAGTGTGGAAT+TGG | - | tig0020980:80828-80847 | Msa1387870:five_prime_UTR | 35.0% | |
| GAGGAGAGAGAGAAGAAAAA+TGG | + | tig0020980:78096-78115 | None:intergenic | 40.0% | |
| AGAAAGAGAATGAAGAGGAG+TGG | + | tig0020980:78129-78148 | None:intergenic | 40.0% | |
| GAGAGAGAAAGAGAATGAAG+AGG | + | tig0020980:78134-78153 | None:intergenic | 40.0% | |
| GTAGTGATGATCATGCATTG+AGG | + | tig0020980:78177-78196 | None:intergenic | 40.0% | |
| GCAATGGAAAGTTCAGTGAA+TGG | - | tig0020980:78285-78304 | Msa1387870:three_prime_UTR | 40.0% | |
| ATGGAAAGTTCAGTGAATGG+TGG | - | tig0020980:78288-78307 | Msa1387870:three_prime_UTR | 40.0% | |
| ACAACAACTTTGGTATGACG+AGG | + | tig0020980:78375-78394 | None:intergenic | 40.0% | |
| ! | CGTACTAAATCGGTTCTTGT+TGG | - | tig0020980:78408-78427 | Msa1387870:three_prime_UTR | 40.0% |
| !! | GGTGTTGTTAAGAAAGCTGT+TGG | - | tig0020980:78438-78457 | Msa1387870:three_prime_UTR | 40.0% |
| ! | GTTAAGAAAGCTGTTGGTCT+TGG | - | tig0020980:78444-78463 | Msa1387870:three_prime_UTR | 40.0% |
| AATGTGCAGGTTCTTACCAA+TGG | - | tig0020980:79225-79244 | Msa1387870:CDS | 40.0% | |
| CAGCTTCACTTCAATACCAT+TGG | + | tig0020980:79244-79263 | None:intergenic | 40.0% | |
| ATCTGGCATGGATCAGATAT+GGG | - | tig0020980:79339-79358 | Msa1387870:intron | 40.0% | |
| CAGCAATCGGGAAAATCAAA+AGG | + | tig0020980:79406-79425 | None:intergenic | 40.0% | |
| CACAAAAGTCCTACAGATCA+AGG | - | tig0020980:79468-79487 | Msa1387870:CDS | 40.0% | |
| GATCATTAGGATCATCTCAC+AGG | - | tig0020980:79504-79523 | Msa1387870:intron | 40.0% | |
| !! | TCTGTTGATTCACAGTCCAA+GGG | - | tig0020980:79545-79564 | Msa1387870:intron | 40.0% |
| !! | GAAGGTTGACTTGAGCAAAT+TGG | - | tig0020980:79703-79722 | Msa1387870:intron | 40.0% |
| TGTCTGCATTGTGGAGATAT+TGG | - | tig0020980:79729-79748 | Msa1387870:intron | 40.0% | |
| ATATTGGCGACACTTCAATC+TGG | - | tig0020980:79745-79764 | Msa1387870:intron | 40.0% | |
| ATCAAAATTGGGTATGCAGG+TGG | - | tig0020980:79827-79846 | Msa1387870:intron | 40.0% | |
| ACGAGGAATCCAAATCTGAT+TGG | + | tig0020980:80014-80033 | None:intergenic | 40.0% | |
| AATCAGATTTGGATTCCTCG+TGG | - | tig0020980:80013-80032 | Msa1387870:intron | 40.0% | |
| CATTCACAAAGTCGACACAT+TGG | - | tig0020980:80050-80069 | Msa1387870:intron | 40.0% | |
| GATTTGTCAAAGCTGCAAAG+AGG | - | tig0020980:80427-80446 | Msa1387870:intron | 40.0% | |
| ACCTTGTGACTTGAATCTTC+AGG | - | tig0020980:80683-80702 | Msa1387870:five_prime_UTR | 40.0% | |
| CCTTGTGACTTGAATCTTCA+GGG | - | tig0020980:80684-80703 | Msa1387870:five_prime_UTR | 40.0% | |
| ! | TAATGTACTTGCTGCTCACA+TGG | - | tig0020980:80738-80757 | Msa1387870:five_prime_UTR | 40.0% |
| ! | AATGTACTTGCTGCTCACAT+GGG | - | tig0020980:80739-80758 | Msa1387870:five_prime_UTR | 40.0% |
| AGAGAATGAAGAGGAGTGGT+GGG | + | tig0020980:78125-78144 | None:intergenic | 45.0% | |
| AAGAGAATGAAGAGGAGTGG+TGG | + | tig0020980:78126-78145 | None:intergenic | 45.0% | |
| !! | AAGAAAGCTGTTGGTCTTGG+TGG | - | tig0020980:78447-78466 | Msa1387870:three_prime_UTR | 45.0% |
| GTATTGAAGTGAAGCTGCAG+AGG | - | tig0020980:79247-79266 | Msa1387870:intron | 45.0% | |
| AGTGTGATTGAACCACCAAC+CGG | - | tig0020980:79279-79298 | Msa1387870:intron | 45.0% | |
| CATATCTGATCCATGCCAGA+TGG | + | tig0020980:79340-79359 | None:intergenic | 45.0% | |
| CATCTGGCATGGATCAGATA+TGG | - | tig0020980:79338-79357 | Msa1387870:intron | 45.0% | |
| !! | CATTCTTGGCCTTGATCTGT+AGG | + | tig0020980:79480-79499 | None:intergenic | 45.0% |
| GGACTGTGAATCAACAGAGA+AGG | + | tig0020980:79543-79562 | None:intergenic | 45.0% | |
| !! | CTCTGTTGATTCACAGTCCA+AGG | - | tig0020980:79544-79563 | Msa1387870:intron | 45.0% |
| !! | CTGTTGATTCACAGTCCAAG+GGG | - | tig0020980:79546-79565 | Msa1387870:intron | 45.0% |
| AGGCATAGAAATTGACCCCT+TGG | + | tig0020980:79564-79583 | None:intergenic | 45.0% | |
| GGGTCAATTTCTATGCCTCA+GGG | - | tig0020980:79566-79585 | Msa1387870:intron | 45.0% | |
| GGTCAATTTCTATGCCTCAG+GGG | - | tig0020980:79567-79586 | Msa1387870:intron | 45.0% | |
| !!! | CTTTTTTGGTTGCTGTTGCG+TGG | - | tig0020980:79789-79808 | Msa1387870:intron | 45.0% |
| AGCTCGTAGATGTTGTTCAG+AGG | - | tig0020980:79877-79896 | Msa1387870:intron | 45.0% | |
| ! | GTGTGTAATTTGTGACCACG+AGG | + | tig0020980:80031-80050 | None:intergenic | 45.0% |
| TCGACACATTGGTGAACCTT+TGG | - | tig0020980:80061-80080 | Msa1387870:intron | 45.0% | |
| GCAAAATGCGAGCAAACCAA+AGG | + | tig0020980:80080-80099 | None:intergenic | 45.0% | |
| ATCAGCACATCAGTGATTGC+TGG | + | tig0020980:80120-80139 | None:intergenic | 45.0% | |
| ! | TCTTTTACTAGGGGGGAGAT+TGG | + | tig0020980:80185-80204 | None:intergenic | 45.0% |
| TCAAAGCTGCAAAGAGGCTT+AGG | - | tig0020980:80433-80452 | Msa1387870:intron | 45.0% | |
| TTACATGGTACCAAGGGAAG+TGG | + | tig0020980:80547-80566 | None:intergenic | 45.0% | |
| CCCTGAAGATTCAAGTCACA+AGG | + | tig0020980:80687-80706 | None:intergenic | 45.0% | |
| GTTAGTGAGAGACAGTGCAG+AGG | + | tig0020980:78073-78092 | None:intergenic | 50.0% | |
| !! | TCGGTTCTTGTTGGTCTTCG+TGG | - | tig0020980:78417-78436 | Msa1387870:three_prime_UTR | 50.0% |
| !! | AAGCTGTTGGTCTTGGTGGT+TGG | - | tig0020980:78451-78470 | Msa1387870:three_prime_UTR | 50.0% |
| !! | TTGGTCTTGGTGGTTGGCAT+TGG | - | tig0020980:78457-78476 | Msa1387870:exon | 50.0% |
| GGGGTCAATTTCTATGCCTC+AGG | - | tig0020980:79565-79584 | Msa1387870:intron | 50.0% | |
| CAATTTCTATGCCTCAGGGG+TGG | - | tig0020980:79570-79589 | Msa1387870:intron | 50.0% | |
| ATATATACCGTCCACCCCTG+AGG | + | tig0020980:79584-79603 | None:intergenic | 50.0% | |
| ! | AGCTGCTCTTTCGATGGGTT+TGG | + | tig0020980:79861-79880 | None:intergenic | 50.0% |
| CTACGAGCTGCTCTTTCGAT+GGG | + | tig0020980:79866-79885 | None:intergenic | 50.0% | |
| TCTACGAGCTGCTCTTTCGA+TGG | + | tig0020980:79867-79886 | None:intergenic | 50.0% | |
| !! | TCAGAGGCATTTCATGTCGC+AGG | - | tig0020980:79893-79912 | Msa1387870:intron | 50.0% |
| CTGCATGAGATTGTGTCTGC+AGG | - | tig0020980:80144-80163 | Msa1387870:intron | 50.0% | |
| ! | GGGGGAGATTGGAATGGATT+TGG | + | tig0020980:80174-80193 | None:intergenic | 50.0% |
| TACTAGGGGGGAGATTGGAA+TGG | + | tig0020980:80180-80199 | None:intergenic | 50.0% | |
| AAGCTGCAAAGAGGCTTAGG+AGG | - | tig0020980:80436-80455 | Msa1387870:intron | 50.0% | |
| TTGCTGCTCACATGGGAAGT+GGG | - | tig0020980:80746-80765 | Msa1387870:five_prime_UTR | 50.0% | |
| !! | TTGGTTTGTGCATCGACGCA+TGG | - | tig0020980:80847-80866 | Msa1387870:five_prime_UTR | 50.0% |
| ! | GAATGAAGAGGAGTGGTGGG+TGG | + | tig0020980:78122-78141 | None:intergenic | 55.0% |
| !! | TCTTGGTGGTTGGCATTGGC+TGG | - | tig0020980:78461-78480 | Msa1387870:exon | 55.0% |
| GTCATCGTCTTCCTCGAGAC+CGG | + | tig0020980:79301-79320 | None:intergenic | 55.0% | |
| TTCTATGCCTCAGGGGTGGA+CGG | - | tig0020980:79574-79593 | Msa1387870:intron | 55.0% | |
| CTTGCTGCTCACATGGGAAG+TGG | - | tig0020980:80745-80764 | Msa1387870:five_prime_UTR | 55.0% | |
| !! | GAGGAGTGGTGGGTGGATAG+AGG | + | tig0020980:78115-78134 | None:intergenic | 60.0% |
| TGAACCACCAACCGGTCTCG+AGG | - | tig0020980:79287-79306 | Msa1387870:intron | 60.0% | |
| TCTTCCTCGAGACCGGTTGG+TGG | + | tig0020980:79294-79313 | None:intergenic | 60.0% | |
| TCGTCTTCCTCGAGACCGGT+TGG | + | tig0020980:79297-79316 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020980 | gene | 78068 | 80880 | 78068 | ID=Msa1387870;Name=Msa1387870 |
| tig0020980 | mRNA | 78068 | 80880 | 78068 | ID=Msa1387870-mRNA-1;Parent=Msa1387870;Name=Msa1387870-mRNA-1;_AED=0.16;_eAED=0.16;_QI=208|1|1|1|1|1|6|407|226 |
| tig0020980 | exon | 78068 | 78549 | 78068 | ID=Msa1387870-mRNA-1:exon:10910;Parent=Msa1387870-mRNA-1 |
| tig0020980 | exon | 79034 | 79102 | 79034 | ID=Msa1387870-mRNA-1:exon:10909;Parent=Msa1387870-mRNA-1 |
| tig0020980 | exon | 79182 | 79244 | 79182 | ID=Msa1387870-mRNA-1:exon:10908;Parent=Msa1387870-mRNA-1 |
| tig0020980 | exon | 79353 | 79492 | 79353 | ID=Msa1387870-mRNA-1:exon:10907;Parent=Msa1387870-mRNA-1 |
| tig0020980 | exon | 79588 | 79714 | 79588 | ID=Msa1387870-mRNA-1:exon:10906;Parent=Msa1387870-mRNA-1 |
| tig0020980 | exon | 80466 | 80880 | 80466 | ID=Msa1387870-mRNA-1:exon:10905;Parent=Msa1387870-mRNA-1 |
| tig0020980 | five_prime_UTR | 80673 | 80880 | 80673 | ID=Msa1387870-mRNA-1:five_prime_utr;Parent=Msa1387870-mRNA-1 |
| tig0020980 | CDS | 80466 | 80672 | 80466 | ID=Msa1387870-mRNA-1:cds;Parent=Msa1387870-mRNA-1 |
| tig0020980 | CDS | 79588 | 79714 | 79588 | ID=Msa1387870-mRNA-1:cds;Parent=Msa1387870-mRNA-1 |
| tig0020980 | CDS | 79353 | 79492 | 79353 | ID=Msa1387870-mRNA-1:cds;Parent=Msa1387870-mRNA-1 |
| tig0020980 | CDS | 79182 | 79244 | 79182 | ID=Msa1387870-mRNA-1:cds;Parent=Msa1387870-mRNA-1 |
| tig0020980 | CDS | 79034 | 79102 | 79034 | ID=Msa1387870-mRNA-1:cds;Parent=Msa1387870-mRNA-1 |
| tig0020980 | CDS | 78475 | 78549 | 78475 | ID=Msa1387870-mRNA-1:cds;Parent=Msa1387870-mRNA-1 |
| tig0020980 | three_prime_UTR | 78068 | 78474 | 78068 | ID=Msa1387870-mRNA-1:three_prime_utr;Parent=Msa1387870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
