Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686200 | XP_003606908.2 | 96.596 | 617 | 21 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686200 | sp|F4IHL3|MTEF2_ARATH | 60.202 | 593 | 221 | 3 | 32 | 609 | 24 | 616 | 0.0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686200 | A0A396I8Z7 | 96.596 | 617 | 21 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1230 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0686200 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020630 | Msa0686200 | 0.803021 | 4.253453e-49 | -8.615850e-47 |
| Msa0044710 | Msa0686200 | 0.813135 | 2.983302e-51 | -8.615850e-47 |
| Msa0050720 | Msa0686200 | 0.801018 | 1.097619e-48 | -8.615850e-47 |
| Msa0050770 | Msa0686200 | 0.825388 | 4.817171e-54 | -8.615850e-47 |
| Msa0064550 | Msa0686200 | 0.806966 | 6.361527e-50 | -8.615850e-47 |
| Msa0109490 | Msa0686200 | 0.807309 | 5.382862e-50 | -8.615850e-47 |
| Msa0686200 | Msa0760890 | 0.810385 | 1.183400e-50 | -8.615850e-47 |
| Msa0686200 | Msa0775580 | 0.801102 | 1.054821e-48 | -8.615850e-47 |
| Msa0686200 | Msa0780140 | 0.804613 | 1.986446e-49 | -8.615850e-47 |
| Msa0686200 | Msa0824140 | 0.801548 | 8.547247e-49 | -8.615850e-47 |
| Msa0686200 | Msa0863250 | 0.813219 | 2.859360e-51 | -8.615850e-47 |
| Msa0686200 | Msa0909710 | 0.803415 | 3.524961e-49 | -8.615850e-47 |
| Msa0686200 | Msa0938420 | 0.800806 | 1.212471e-48 | -8.615850e-47 |
| Msa0686200 | Msa1004210 | 0.818583 | 1.817548e-52 | -8.615850e-47 |
| Msa0686200 | Msa1004260 | 0.803361 | 3.616204e-49 | -8.615850e-47 |
| Msa0686200 | Msa1046610 | 0.827044 | 1.944569e-54 | -8.615850e-47 |
| Msa0686200 | Msa1130650 | 0.830165 | 3.423367e-55 | -8.615850e-47 |
| Msa0686200 | Msa1182830 | 0.819863 | 9.288809e-53 | -8.615850e-47 |
| Msa0686200 | Msa1418200 | 0.805127 | 1.550839e-49 | -8.615850e-47 |
| Msa0686200 | Msa1440610 | 0.803951 | 2.728524e-49 | -8.615850e-47 |
| Msa0153440 | Msa0686200 | 0.808115 | 3.628772e-50 | -8.615850e-47 |
| Msa0154240 | Msa0686200 | 0.806911 | 6.535347e-50 | -8.615850e-47 |
| Msa0159750 | Msa0686200 | 0.804626 | 1.973671e-49 | -8.615850e-47 |
| Msa0160520 | Msa0686200 | 0.810192 | 1.302506e-50 | -8.615850e-47 |
| Msa0171920 | Msa0686200 | 0.801170 | 1.021434e-48 | -8.615850e-47 |
| Msa0182930 | Msa0686200 | 0.810238 | 1.273075e-50 | -8.615850e-47 |
| Msa0240780 | Msa0686200 | 0.812037 | 5.185602e-51 | -8.615850e-47 |
| Msa0326670 | Msa0686200 | 0.810499 | 1.118058e-50 | -8.615850e-47 |
| Msa0354390 | Msa0686200 | 0.808964 | 2.391175e-50 | -8.615850e-47 |
| Msa0540070 | Msa0686200 | 0.815347 | 9.683152e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686200 | MtrunA17_Chr4g0034981 | 96.596 | 617 | 21 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1230 |
| Msa0686200 | MtrunA17_Chr5g0428941 | 27.324 | 355 | 250 | 4 | 235 | 587 | 136 | 484 | 7.82e-36 | 141 |
| Msa0686200 | MtrunA17_Chr1g0212691 | 24.859 | 354 | 256 | 4 | 235 | 585 | 104 | 450 | 4.83e-33 | 133 |
| Msa0686200 | MtrunA17_Chr6g0448821 | 27.726 | 321 | 228 | 4 | 266 | 585 | 39 | 356 | 2.47e-32 | 128 |
| Msa0686200 | MtrunA17_Chr4g0043941 | 25.714 | 315 | 194 | 6 | 275 | 586 | 42 | 319 | 4.12e-31 | 124 |
| Msa0686200 | MtrunA17_Chr2g0294671 | 28.114 | 281 | 165 | 5 | 349 | 595 | 215 | 492 | 1.28e-25 | 110 |
| Msa0686200 | MtrunA17_Chr2g0294671 | 25.000 | 236 | 165 | 5 | 271 | 504 | 244 | 469 | 7.36e-18 | 87.0 |
| Msa0686200 | MtrunA17_Chr2g0294671 | 32.000 | 150 | 98 | 2 | 414 | 560 | 208 | 356 | 2.50e-14 | 75.9 |
| Msa0686200 | MtrunA17_Chr2g0311181 | 29.070 | 258 | 169 | 7 | 347 | 602 | 71 | 316 | 2.09e-23 | 101 |
| Msa0686200 | MtrunA17_Chr8g0391881 | 23.970 | 267 | 198 | 2 | 298 | 562 | 111 | 374 | 1.27e-22 | 100 |
| Msa0686200 | MtrunA17_Chr2g0304101 | 28.448 | 232 | 160 | 5 | 361 | 590 | 82 | 309 | 6.77e-20 | 90.9 |
| Msa0686200 | MtrunA17_Chr5g0445491 | 23.746 | 299 | 186 | 6 | 274 | 566 | 187 | 449 | 6.65e-19 | 90.1 |
| Msa0686200 | MtrunA17_Chr5g0445491 | 23.529 | 272 | 198 | 6 | 198 | 462 | 182 | 450 | 2.79e-12 | 69.3 |
| Msa0686200 | MtrunA17_Chr5g0417641 | 28.511 | 235 | 160 | 5 | 357 | 587 | 64 | 294 | 1.88e-17 | 83.6 |
| Msa0686200 | MtrunA17_Chr7g0250261 | 27.670 | 206 | 142 | 5 | 384 | 585 | 77 | 279 | 1.56e-14 | 74.7 |
| Msa0686200 | MtrunA17_Chr0c29g0494001 | 27.670 | 206 | 142 | 5 | 384 | 585 | 77 | 279 | 1.56e-14 | 74.7 |
| Msa0686200 | MtrunA17_Chr3g0127891 | 21.975 | 405 | 248 | 14 | 210 | 564 | 83 | 469 | 4.39e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0686200 | AT2G21710.1 | 60.202 | 593 | 221 | 3 | 32 | 609 | 24 | 616 | 0.0 | 754 |
| Msa0686200 | AT2G21710.2 | 60.976 | 533 | 193 | 3 | 32 | 549 | 24 | 556 | 0.0 | 682 |
| Msa0686200 | AT2G21710.3 | 61.090 | 532 | 192 | 3 | 32 | 548 | 24 | 555 | 0.0 | 681 |
| Msa0686200 | AT4G02990.2 | 27.841 | 352 | 246 | 4 | 236 | 585 | 145 | 490 | 1.26e-34 | 138 |
| Msa0686200 | AT4G02990.1 | 27.841 | 352 | 246 | 4 | 236 | 585 | 145 | 490 | 1.26e-34 | 138 |
| Msa0686200 | AT1G78930.1 | 29.296 | 355 | 241 | 7 | 234 | 585 | 227 | 574 | 1.43e-33 | 136 |
| Msa0686200 | AT1G78930.1 | 23.774 | 265 | 196 | 3 | 203 | 462 | 260 | 523 | 4.42e-15 | 79.0 |
| Msa0686200 | AT2G44020.1 | 24.737 | 380 | 266 | 5 | 235 | 611 | 109 | 471 | 3.46e-33 | 134 |
| Msa0686200 | AT4G38160.4 | 26.786 | 336 | 202 | 8 | 257 | 586 | 24 | 321 | 1.33e-31 | 125 |
| Msa0686200 | AT4G38160.1 | 26.786 | 336 | 202 | 8 | 257 | 586 | 24 | 321 | 1.33e-31 | 125 |
| Msa0686200 | AT4G38160.2 | 26.786 | 336 | 202 | 8 | 257 | 586 | 24 | 321 | 2.81e-31 | 125 |
| Msa0686200 | AT4G38160.3 | 26.786 | 336 | 202 | 8 | 257 | 586 | 24 | 321 | 4.11e-31 | 125 |
| Msa0686200 | AT4G14605.2 | 24.206 | 252 | 183 | 5 | 336 | 585 | 222 | 467 | 2.26e-21 | 98.2 |
| Msa0686200 | AT4G14605.2 | 25.824 | 182 | 128 | 2 | 274 | 455 | 268 | 442 | 3.71e-14 | 75.9 |
| Msa0686200 | AT4G14605.1 | 24.206 | 252 | 183 | 5 | 336 | 585 | 222 | 467 | 2.26e-21 | 98.2 |
| Msa0686200 | AT4G14605.1 | 25.824 | 182 | 128 | 2 | 274 | 455 | 268 | 442 | 3.71e-14 | 75.9 |
| Msa0686200 | AT5G55580.2 | 27.863 | 262 | 140 | 8 | 349 | 567 | 82 | 337 | 2.28e-20 | 94.0 |
| Msa0686200 | AT5G55580.2 | 24.113 | 282 | 204 | 5 | 198 | 472 | 69 | 347 | 2.33e-12 | 69.7 |
| Msa0686200 | AT2G34620.1 | 27.600 | 250 | 172 | 6 | 344 | 591 | 54 | 296 | 2.60e-20 | 92.4 |
| Msa0686200 | AT5G55580.1 | 27.863 | 262 | 140 | 8 | 349 | 567 | 188 | 443 | 2.70e-20 | 95.1 |
| Msa0686200 | AT5G55580.1 | 24.823 | 282 | 202 | 4 | 198 | 472 | 175 | 453 | 1.63e-12 | 70.5 |
| Msa0686200 | AT2G36000.1 | 28.400 | 250 | 159 | 9 | 348 | 590 | 76 | 312 | 4.45e-18 | 86.3 |
| Msa0686200 | AT2G36000.2 | 28.400 | 250 | 159 | 9 | 348 | 590 | 76 | 312 | 4.75e-18 | 85.9 |
| Msa0686200 | AT2G03050.2 | 27.984 | 243 | 165 | 6 | 348 | 587 | 36 | 271 | 6.23e-17 | 82.0 |
| Msa0686200 | AT2G03050.1 | 27.984 | 243 | 165 | 6 | 348 | 587 | 35 | 270 | 6.55e-17 | 82.0 |
| Msa0686200 | AT5G54180.1 | 23.708 | 329 | 199 | 10 | 269 | 592 | 214 | 495 | 9.23e-17 | 84.0 |
| Msa0686200 | AT3G46950.1 | 27.507 | 349 | 224 | 13 | 267 | 604 | 111 | 441 | 5.98e-15 | 78.2 |
| Msa0686200 | AT5G55580.3 | 29.167 | 192 | 123 | 7 | 349 | 533 | 188 | 373 | 8.45e-15 | 77.0 |
| Msa0686200 | AT5G55580.3 | 23.267 | 202 | 152 | 3 | 277 | 476 | 187 | 387 | 9.49e-13 | 70.9 |
| Msa0686200 | AT5G55580.3 | 23.295 | 176 | 128 | 4 | 276 | 446 | 221 | 394 | 3.78e-12 | 68.9 |
| Msa0686200 | AT3G18870.1 | 26.471 | 204 | 143 | 5 | 385 | 585 | 69 | 268 | 6.19e-14 | 73.2 |
| Msa0686200 | AT1G79220.1 | 23.438 | 256 | 187 | 5 | 320 | 575 | 91 | 337 | 7.31e-13 | 71.2 |
| Msa0686200 | AT1G62110.1 | 24.340 | 341 | 219 | 11 | 266 | 585 | 112 | 434 | 5.07e-11 | 65.9 |
Find 149 sgRNAs with CRISPR-Local
Find 538 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATTACTTGAAAGAATT+TGG | 0.111467 | 4_4:-50526702 | Msa0686200:CDS |
| GTTAAGTATCTGTACTATTA+TGG | 0.143456 | 4_4:-50526594 | Msa0686200:CDS |
| TGACAGTAGATTGAAGTTTA+TGG | 0.164656 | 4_4:+50525527 | None:intergenic |
| GGTTTAGATGCGAAGGATTT+TGG | 0.193478 | 4_4:-50526916 | Msa0686200:CDS |
| CTTCTTCATCACACCGAAAA+AGG | 0.200244 | 4_4:+50528234 | None:intergenic |
| GCACTGTCTAAGATGGTTTA+AGG | 0.204913 | 4_4:-50525108 | Msa0686200:intron |
| AATTACTTATACTGGTAATT+TGG | 0.209026 | 4_4:-50528123 | Msa0686200:CDS |
| CGGCGTACGTCTTCGGCAAC+TGG | 0.234628 | 4_4:-50525932 | Msa0686200:CDS |
| GCAATGAGAAAGGGTAAATT+TGG | 0.250404 | 4_4:-50528146 | Msa0686200:CDS |
| TGTGCAGTTCTATCTGGATA+TGG | 0.253475 | 4_4:-50526938 | Msa0686200:CDS |
| TTGACGATGGTGGTGAGTTT+TGG | 0.269650 | 4_4:+50528530 | None:intergenic |
| AATTTGAGTGTTGATCTTTC+AGG | 0.274900 | 4_4:+50524611 | None:intergenic |
| TTGTTAAGGGAGAGTTTATT+GGG | 0.275265 | 4_4:-50527128 | Msa0686200:CDS |
| TTCTGGGAATTGGTTGGTTT+TGG | 0.280150 | 4_4:+50528483 | None:intergenic |
| CTCAAGTTGTGCCACTTATC+AGG | 0.283792 | 4_4:-50527983 | Msa0686200:intron |
| GTTGATTATTTAGAGTTTAC+TGG | 0.287836 | 4_4:-50527042 | Msa0686200:CDS |
| TATATCTTGCAAATTATCTT+AGG | 0.288526 | 4_4:+50524402 | None:intergenic |
| ATCATAATTCTTCTTCTCTA+AGG | 0.288793 | 4_4:-50525345 | Msa0686200:three_prime_UTR |
| TTAAGTATCTGTACTATTAT+GGG | 0.290110 | 4_4:-50526593 | Msa0686200:CDS |
| TTACGTCTGGGCTGTAGATT+GGG | 0.309402 | 4_4:+50525483 | None:intergenic |
| AGAAGAAGAGGGAATGATTA+TGG | 0.309975 | 4_4:-50528216 | Msa0686200:CDS |
| AAATTTGGAATTACTTATAC+TGG | 0.310485 | 4_4:-50528131 | Msa0686200:CDS |
| AGAGATAGCCATGTTATATA+TGG | 0.319981 | 4_4:+50524350 | None:intergenic |
| GGTAATTTGGTTGATAGGTT+GGG | 0.326740 | 4_4:-50528110 | Msa0686200:CDS |
| TTTACGTCTGGGCTGTAGAT+TGG | 0.328647 | 4_4:+50525482 | None:intergenic |
| ATACTGGTAATTTGGTTGAT+AGG | 0.329853 | 4_4:-50528115 | Msa0686200:CDS |
| GTATAGTGACCGAGAGCTTT+AGG | 0.334085 | 4_4:+50526874 | None:intergenic |
| TTTGTTAAGGGAGAGTTTAT+TGG | 0.337774 | 4_4:-50527129 | Msa0686200:CDS |
| TGTCTCTCGGCGTACGTCTT+CGG | 0.342879 | 4_4:-50525939 | Msa0686200:CDS |
| GATTCGTGTGCAGTTCTATC+TGG | 0.345662 | 4_4:-50526944 | Msa0686200:CDS |
| TTGATTACTTGAAAGAATTT+GGG | 0.348366 | 4_4:-50526701 | Msa0686200:CDS |
| AGAATTTGGGCTTGAAAGTA+AGG | 0.349816 | 4_4:-50526688 | Msa0686200:CDS |
| TGCTAATTTGAAAAGATTGC+CGG | 0.361400 | 4_4:-50528057 | Msa0686200:CDS |
| ATTCCAAAGGTTATAGCTCT+TGG | 0.363130 | 4_4:-50526021 | Msa0686200:CDS |
| GTTGAAGTCGGTGTTTGTTA+AGG | 0.364469 | 4_4:-50527142 | Msa0686200:CDS |
| GAGGGAAACTTGAGTCTATA+AGG | 0.365728 | 4_4:-50527179 | Msa0686200:CDS |
| AGCTCTTGGACCTGAGCTCT+TGG | 0.369738 | 4_4:-50526007 | Msa0686200:CDS |
| TGCATTTCGGCCACAATTGA+TGG | 0.374643 | 4_4:-50526649 | Msa0686200:CDS |
| AAAAGAACCCCACAGTTTCC+AGG | 0.379101 | 4_4:-50528320 | Msa0686200:CDS |
| GTCTCCGCAATTCTATTCAT+TGG | 0.380242 | 4_4:+50525149 | None:intergenic |
| GGTGTTGTTCGTTTGGGTTT+TGG | 0.381963 | 4_4:+50528504 | None:intergenic |
| GCATTGTGTCTTCTGGGAAT+TGG | 0.382568 | 4_4:+50528473 | None:intergenic |
| GGTCCAAGAGCTATAACCTT+TGG | 0.387818 | 4_4:+50526018 | None:intergenic |
| CCATTGTTCTTCAATGCTGC+AGG | 0.389577 | 4_4:+50526626 | None:intergenic |
| TTGAAGTCGGTGTTTGTTAA+GGG | 0.394753 | 4_4:-50527141 | Msa0686200:CDS |
| TATTCCAAGACACAAGGTTC+TGG | 0.399312 | 4_4:-50525641 | Msa0686200:CDS |
| ATTTAGAGTTTACTGGAGTC+AGG | 0.408619 | 4_4:-50527035 | Msa0686200:CDS |
| TTCTTCAGTGACTCCAGCCT+TGG | 0.412260 | 4_4:+50526047 | None:intergenic |
| AAAGTCGAATTCGAATATTC+CGG | 0.417158 | 4_4:+50528038 | None:intergenic |
| ATATTCTTGTTGACCAAGGC+TGG | 0.418781 | 4_4:-50526060 | Msa0686200:CDS |
| GTGCAGTTCTATCTGGATAT+GGG | 0.421836 | 4_4:-50526937 | Msa0686200:CDS |
| ACAGCCTTTACAAGAAGATT+AGG | 0.424005 | 4_4:-50526252 | Msa0686200:CDS |
| TTGGTAAGTTGCTTGCATTT+CGG | 0.429654 | 4_4:-50526662 | Msa0686200:CDS |
| TCCACCAGAACCTTGTGTCT+TGG | 0.429802 | 4_4:+50525637 | None:intergenic |
| GCTCTTGGACCTGAGCTCTT+GGG | 0.443260 | 4_4:-50526006 | Msa0686200:CDS |
| ACTTGCAATTTATCATCCGC+TGG | 0.450052 | 4_4:-50525240 | Msa0686200:three_prime_UTR |
| CAATTGCTAAAGAGTGTGCT+TGG | 0.452936 | 4_4:-50525194 | Msa0686200:three_prime_UTR |
| TTGCGCAAATAAGTATACTT+AGG | 0.455182 | 4_4:+50525853 | None:intergenic |
| TGGTAATTTGGTTGATAGGT+TGG | 0.459689 | 4_4:-50528111 | Msa0686200:CDS |
| GAAATAACTCAGTAGAGAAA+AGG | 0.460875 | 4_4:-50525293 | Msa0686200:three_prime_UTR |
| TCTTACTGTATTAACTTCAC+TGG | 0.469433 | 4_4:-50525390 | Msa0686200:three_prime_UTR |
| GTAAAGTATTATTTGTCTCT+CGG | 0.471517 | 4_4:-50525952 | Msa0686200:CDS |
| TGGAGTCAGGAGGGAATGGA+TGG | 0.477188 | 4_4:-50527022 | Msa0686200:CDS |
| CAATGACATCGTGCAAAGTT+CGG | 0.479808 | 4_4:+50525821 | None:intergenic |
| ACTTCTTGCACTGTCTAAGA+TGG | 0.480138 | 4_4:-50525115 | Msa0686200:three_prime_UTR |
| AGCTCTCGGTCACTATACTT+TGG | 0.485000 | 4_4:-50526869 | Msa0686200:CDS |
| TTTAAAGAAGCAATGAGAAA+GGG | 0.490109 | 4_4:-50528155 | Msa0686200:CDS |
| TATTGTATCTGAGCAGCATT+GGG | 0.494643 | 4_4:+50525890 | None:intergenic |
| GGGCTTGAAAGTAAGGATGT+TGG | 0.497791 | 4_4:-50526681 | Msa0686200:CDS |
| CGGTGTGATGAAGAAGAAGA+GGG | 0.499032 | 4_4:-50528227 | Msa0686200:CDS |
| TGTGTCTTCTGGGAATTGGT+TGG | 0.500366 | 4_4:+50528477 | None:intergenic |
| TAATTCTTCTTCTCTAAGGC+AGG | 0.504149 | 4_4:-50525341 | Msa0686200:three_prime_UTR |
| GAAGTTGTTATCTTACAGCT+TGG | 0.512987 | 4_4:-50526977 | Msa0686200:CDS |
| GCTGCGGAGTGACGGGGAGT+TGG | 0.513594 | 4_4:-50527073 | Msa0686200:CDS |
| TCAATCTACTGTCATGAAAG+AGG | 0.513691 | 4_4:-50525518 | Msa0686200:CDS |
| CATTCTCCTCATCCCATCTC+GGG | 0.520803 | 4_4:+50526566 | None:intergenic |
| GGAAGAGAAGAACCCACATC+AGG | 0.521378 | 4_4:+50528269 | None:intergenic |
| TGTTGGGTCTTGTAGTGAAG+TGG | 0.522719 | 4_4:+50528388 | None:intergenic |
| GCATTCTCCTCATCCCATCT+CGG | 0.523104 | 4_4:+50526565 | None:intergenic |
| ACTTAGGGGTTCAAAATGAC+GGG | 0.524701 | 4_4:-50526315 | Msa0686200:CDS |
| TTACTGGAGTCAGGAGGGAA+TGG | 0.529512 | 4_4:-50527026 | Msa0686200:CDS |
| AGCATAGTACATAAGCTTGA+AGG | 0.532239 | 4_4:-50525979 | Msa0686200:CDS |
| TAACCATGATACCTGATAAG+TGG | 0.532585 | 4_4:+50527972 | None:intergenic |
| GGATTACCCGAGATGGGATG+AGG | 0.534187 | 4_4:-50526572 | Msa0686200:CDS |
| AGGCTGTAAGTGAGTAGAGT+GGG | 0.534347 | 4_4:+50526268 | None:intergenic |
| CAGGCCTAATCTTCTTGTAA+AGG | 0.535894 | 4_4:+50526248 | None:intergenic |
| TCGGTGTGATGAAGAAGAAG+AGG | 0.537290 | 4_4:-50528228 | Msa0686200:CDS |
| AATTGCTAAAGAGTGTGCTT+GGG | 0.539072 | 4_4:-50525193 | Msa0686200:three_prime_UTR |
| ATCTCCAAGTGATCCTGATG+TGG | 0.539338 | 4_4:-50528282 | Msa0686200:CDS |
| AATTTGGTTGATAGGTTGGG+TGG | 0.539654 | 4_4:-50528107 | Msa0686200:CDS |
| ATGCTGCATCCCAAGAGCTC+AGG | 0.539681 | 4_4:+50525997 | None:intergenic |
| GAACCCACATCAGGATCACT+TGG | 0.546534 | 4_4:+50528278 | None:intergenic |
| TATTATGGGATTACCCGAGA+TGG | 0.548665 | 4_4:-50526579 | Msa0686200:CDS |
| TCGTAGGAAGGTTACTGAAG+AGG | 0.548898 | 4_4:-50528180 | Msa0686200:CDS |
| AGCTATTGAGATTCGTAGGA+AGG | 0.552352 | 4_4:-50528192 | Msa0686200:CDS |
| TCCAAGACACAAGGTTCTGG+TGG | 0.555314 | 4_4:-50525638 | Msa0686200:CDS |
| GGCGTACGTCTTCGGCAACT+GGG | 0.557742 | 4_4:-50525931 | Msa0686200:CDS |
| CTTGCAATTTATCATCCGCT+GGG | 0.560833 | 4_4:-50525239 | Msa0686200:three_prime_UTR |
| GTATTGTATCTGAGCAGCAT+TGG | 0.561020 | 4_4:+50525889 | None:intergenic |
| ATGCTGCAGGCCATCAATTG+TGG | 0.563869 | 4_4:+50526639 | None:intergenic |
| ATTATGGGATTACCCGAGAT+GGG | 0.565768 | 4_4:-50526578 | Msa0686200:CDS |
| GGATATGGGTTTAGATGCGA+AGG | 0.566566 | 4_4:-50526923 | Msa0686200:CDS |
| GACTTAGGGGTTCAAAATGA+CGG | 0.569313 | 4_4:-50526316 | Msa0686200:CDS |
| TGGAAGCTATTGAGATTCGT+AGG | 0.571096 | 4_4:-50528196 | Msa0686200:CDS |
| TACTTATTTGCGCAAAACCA+TGG | 0.571905 | 4_4:-50525845 | Msa0686200:CDS |
| TTACCTTGAGCCGTCTATCA+CGG | 0.574361 | 4_4:-50524658 | Msa0686200:three_prime_UTR |
| TACGTCTGGGCTGTAGATTG+GGG | 0.575774 | 4_4:+50525484 | None:intergenic |
| TAAATTGAACCTGGAAACTG+TGG | 0.577201 | 4_4:+50528311 | None:intergenic |
| AATGCTTACAATTAAACCAA+TGG | 0.584764 | 4_4:-50526547 | Msa0686200:CDS |
| TGATGCTTAGCCGTGATAGA+CGG | 0.584847 | 4_4:+50524648 | None:intergenic |
| TGTTAAGGGAGAGTTTATTG+GGG | 0.585317 | 4_4:-50527127 | Msa0686200:CDS |
| TAGTACAGATACTTAACAAG+AGG | 0.586183 | 4_4:+50526600 | None:intergenic |
| TAGCCGTGATAGACGGCTCA+AGG | 0.586751 | 4_4:+50524655 | None:intergenic |
| AGAGATGACTATTGTGCCAA+AGG | 0.586961 | 4_4:-50526508 | Msa0686200:intron |
| AAGTCAACACAAAAGACCAT+TGG | 0.588974 | 4_4:+50526531 | None:intergenic |
| TCTTAACTGCGATGATATGT+CGG | 0.590311 | 4_4:+50524684 | None:intergenic |
| GCAAGAAGATATCATTCTCA+AGG | 0.592078 | 4_4:-50524444 | Msa0686200:three_prime_UTR |
| GATTGAGCGTAAATTGAACC+TGG | 0.592608 | 4_4:+50528302 | None:intergenic |
| TGGAATAATTCGACCCTCGA+GGG | 0.595008 | 4_4:+50525657 | None:intergenic |
| GGGGATGCAATGTTAAAGAG+TGG | 0.597352 | 4_4:-50527108 | Msa0686200:CDS |
| AAGGCTGTAAGTGAGTAGAG+TGG | 0.599774 | 4_4:+50526267 | None:intergenic |
| TCTTGTAGTGAAGTGGATGA+AGG | 0.600616 | 4_4:+50528395 | None:intergenic |
| TTACAAGAAGATTAGGCCTG+TGG | 0.602463 | 4_4:-50526245 | Msa0686200:intron |
| GGATGGGTTATGTTGTGAGT+CGG | 0.603970 | 4_4:-50527005 | Msa0686200:CDS |
| CCTGCAGCATTGAAGAACAA+TGG | 0.605000 | 4_4:-50526626 | Msa0686200:CDS |
| AGAGTTTACTGGAGTCAGGA+GGG | 0.605540 | 4_4:-50527031 | Msa0686200:CDS |
| TCTCCAAGTGATCCTGATGT+GGG | 0.605585 | 4_4:-50528281 | Msa0686200:CDS |
| CACTGAAGAAAATATTCCAA+AGG | 0.608783 | 4_4:-50526034 | Msa0686200:CDS |
| TAGAGTTTACTGGAGTCAGG+AGG | 0.614457 | 4_4:-50527032 | Msa0686200:CDS |
| TAGACAGTGCAAGAAGTACA+CGG | 0.614958 | 4_4:+50525121 | None:intergenic |
| ATCGTGCAAAGTTCGGACCA+TGG | 0.622950 | 4_4:+50525828 | None:intergenic |
| GGTCATATTCTTGTTGACCA+AGG | 0.622996 | 4_4:-50526064 | Msa0686200:CDS |
| AAAATGAGCTTAGCTATCTG+AGG | 0.626607 | 4_4:+50527210 | None:intergenic |
| ACGATGTCATTGAGTTTCCG+AGG | 0.627471 | 4_4:-50525810 | Msa0686200:intron |
| AAGCTGTAAGATAACAACTT+CGG | 0.628272 | 4_4:+50526979 | None:intergenic |
| CCGTGTTGAGTGGTTGAAGT+CGG | 0.637384 | 4_4:-50527154 | Msa0686200:CDS |
| AAATTGAACCTGGAAACTGT+GGG | 0.637519 | 4_4:+50528312 | None:intergenic |
| CTATAAGGAACCGTGTTGAG+TGG | 0.637525 | 4_4:-50527164 | Msa0686200:CDS |
| TCGAATTATTCCAAGACACA+AGG | 0.638216 | 4_4:-50525647 | Msa0686200:CDS |
| CCGACTTCAACCACTCAACA+CGG | 0.641986 | 4_4:+50527154 | None:intergenic |
| GGAGTCAGGAGGGAATGGAT+GGG | 0.644138 | 4_4:-50527021 | Msa0686200:CDS |
| TTGGAATAATTCGACCCTCG+AGG | 0.648302 | 4_4:+50525656 | None:intergenic |
| TTTGGAAGAAATGAGCCGAA+AGG | 0.661203 | 4_4:-50526851 | Msa0686200:intron |
| TGTGCCAATGAATAGAATTG+CGG | 0.666692 | 4_4:-50525153 | Msa0686200:three_prime_UTR |
| AGATGAAGAATTTAACAACA+TGG | 0.681193 | 4_4:-50525572 | Msa0686200:CDS |
| AGACAGTGCAAGAAGTACAC+GGG | 0.687306 | 4_4:+50525122 | None:intergenic |
| TTCATTGGCACACTTCACAG+TGG | 0.725323 | 4_4:+50525164 | None:intergenic |
| ACAAGTGACAAGTGACCCAG+CGG | 0.725382 | 4_4:+50525224 | None:intergenic |
| AATTGAACCTGGAAACTGTG+GGG | 0.731440 | 4_4:+50528313 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAAATTATGTATCTA+TGG | + | chr4_4:50527248-50527267 | None:intergenic | 10.0% |
| !!! | TTTTAAAAATTATGTATCTA+TGG | + | chr4_4:50527248-50527267 | None:intergenic | 10.0% |
| !!! | TAATTTTTGACAAACTTTAT+AGG | - | chr4_4:50526192-50526211 | Msa0686200:intron | 15.0% |
| !!! | AATTTTTGACAAACTTTATA+GGG | - | chr4_4:50526193-50526212 | Msa0686200:intron | 15.0% |
| !! | TTCATAAATAAAATTTCCAA+TGG | - | chr4_4:50526602-50526621 | Msa0686200:CDS | 15.0% |
| !!! | AAGTTTCATTTTTGTTTAAT+AGG | + | chr4_4:50527759-50527778 | None:intergenic | 15.0% |
| !!! | ATTTTAATCCATATATAACA+TGG | - | chr4_4:50528657-50528676 | Msa0686200:intron | 15.0% |
| !!! | TAATTTTTGACAAACTTTAT+AGG | - | chr4_4:50526192-50526211 | Msa0686200:intron | 15.0% |
| !!! | AATTTTTGACAAACTTTATA+GGG | - | chr4_4:50526193-50526212 | Msa0686200:intron | 15.0% |
| !! | TTCATAAATAAAATTTCCAA+TGG | - | chr4_4:50526602-50526621 | Msa0686200:CDS | 15.0% |
| !!! | AAGTTTCATTTTTGTTTAAT+AGG | + | chr4_4:50527759-50527778 | None:intergenic | 15.0% |
| !!! | ATTTTAATCCATATATAACA+TGG | - | chr4_4:50528657-50528676 | Msa0686200:intron | 15.0% |
| !!! | AAATTTGGAATTACTTATAC+TGG | - | chr4_4:50524884-50524903 | Msa0686200:intron | 20.0% |
| !! | AATTACTTATACTGGTAATT+TGG | - | chr4_4:50524892-50524911 | Msa0686200:intron | 20.0% |
| !!! | GAATTCGACTTTTAATTTAA+GGG | - | chr4_4:50524988-50525007 | Msa0686200:intron | 20.0% |
| !!! | TTTTATTGTTTTGAAGTTGT+TGG | - | chr4_4:50525255-50525274 | Msa0686200:three_prime_UTR | 20.0% |
| !!! | AAGTTTTTGTATTTTGATTG+TGG | - | chr4_4:50525736-50525755 | Msa0686200:intron | 20.0% |
| !! | TCAAAAATTAATGTACCTTT+CGG | + | chr4_4:50526182-50526201 | None:intergenic | 20.0% |
| !! | TTGATTACTTGAAAGAATTT+GGG | - | chr4_4:50526314-50526333 | Msa0686200:CDS | 20.0% |
| !! | TTAAGTATCTGTACTATTAT+GGG | - | chr4_4:50526422-50526441 | Msa0686200:intron | 20.0% |
| !! | CTAAAAAATTTACATACCTT+TGG | + | chr4_4:50526526-50526545 | None:intergenic | 20.0% |
| !!! | TGTTACATATTTTATCATGA+AGG | - | chr4_4:50526662-50526681 | Msa0686200:CDS | 20.0% |
| !!! | ATTTAAAGTTGAATATGCAA+TGG | + | chr4_4:50527300-50527319 | None:intergenic | 20.0% |
| !! | TGTAGTAATGAAATTATTTG+AGG | - | chr4_4:50528530-50528549 | Msa0686200:CDS | 20.0% |
| !! | TATATCTTGCAAATTATCTT+AGG | + | chr4_4:50528616-50528635 | None:intergenic | 20.0% |
| !!! | AAATTTGGAATTACTTATAC+TGG | - | chr4_4:50524884-50524903 | Msa0686200:intron | 20.0% |
| !! | AATTACTTATACTGGTAATT+TGG | - | chr4_4:50524892-50524911 | Msa0686200:intron | 20.0% |
| !!! | GAATTCGACTTTTAATTTAA+GGG | - | chr4_4:50524988-50525007 | Msa0686200:intron | 20.0% |
| !!! | TTTTATTGTTTTGAAGTTGT+TGG | - | chr4_4:50525255-50525274 | Msa0686200:three_prime_UTR | 20.0% |
| !!! | AAGTTTTTGTATTTTGATTG+TGG | - | chr4_4:50525736-50525755 | Msa0686200:intron | 20.0% |
| !! | TCAAAAATTAATGTACCTTT+CGG | + | chr4_4:50526182-50526201 | None:intergenic | 20.0% |
| !! | TTGATTACTTGAAAGAATTT+GGG | - | chr4_4:50526314-50526333 | Msa0686200:CDS | 20.0% |
| !! | TTAAGTATCTGTACTATTAT+GGG | - | chr4_4:50526422-50526441 | Msa0686200:intron | 20.0% |
| !! | CTAAAAAATTTACATACCTT+TGG | + | chr4_4:50526526-50526545 | None:intergenic | 20.0% |
| !!! | TGTTACATATTTTATCATGA+AGG | - | chr4_4:50526662-50526681 | Msa0686200:CDS | 20.0% |
| !!! | ATTTAAAGTTGAATATGCAA+TGG | + | chr4_4:50527300-50527319 | None:intergenic | 20.0% |
| !! | TGTAGTAATGAAATTATTTG+AGG | - | chr4_4:50528530-50528549 | Msa0686200:CDS | 20.0% |
| !! | TATATCTTGCAAATTATCTT+AGG | + | chr4_4:50528616-50528635 | None:intergenic | 20.0% |
| !!! | TGTTAGTGTTTTTTTGTGTA+AGG | + | chr4_4:50524595-50524614 | None:intergenic | 25.0% |
| !!! | TTTTAAAGAAGCAATGAGAA+AGG | - | chr4_4:50524859-50524878 | Msa0686200:intron | 25.0% |
| ! | TTTAAAGAAGCAATGAGAAA+GGG | - | chr4_4:50524860-50524879 | Msa0686200:intron | 25.0% |
| !!! | CGAATTCGACTTTTAATTTA+AGG | - | chr4_4:50524987-50525006 | Msa0686200:intron | 25.0% |
| ! | TTATCTATGAAGAATTGACA+CGG | - | chr4_4:50525103-50525122 | Msa0686200:intron | 25.0% |
| ! | ACTCTAATAAAAAATGTGTC+CGG | + | chr4_4:50525219-50525238 | None:intergenic | 25.0% |
| !!! | TCAAAATAGGCATTGAAATT+TGG | + | chr4_4:50525429-50525448 | None:intergenic | 25.0% |
| ! | AGAGTGAATGTAATCAAAAT+AGG | + | chr4_4:50525442-50525461 | None:intergenic | 25.0% |
| !! | GTTGATTATTTAGAGTTTAC+TGG | - | chr4_4:50525973-50525992 | Msa0686200:CDS | 25.0% |
| ! | TTTAGGAAAATCAAAAACCA+TGG | + | chr4_4:50526127-50526146 | None:intergenic | 25.0% |
| ! | ATGCAACAATTGTAAATTTC+AGG | - | chr4_4:50526291-50526310 | Msa0686200:CDS | 25.0% |
| ! | GTTGATTACTTGAAAGAATT+TGG | - | chr4_4:50526313-50526332 | Msa0686200:CDS | 25.0% |
| ! | GTTAAGTATCTGTACTATTA+TGG | - | chr4_4:50526421-50526440 | Msa0686200:intron | 25.0% |
| ! | AATGCTTACAATTAAACCAA+TGG | - | chr4_4:50526468-50526487 | Msa0686200:intron | 25.0% |
| !! | ATTGTCAGTATTTTATCATC+AGG | + | chr4_4:50526642-50526661 | None:intergenic | 25.0% |
| !!! | TAAAGTTTTTTCAGGACTTA+GGG | - | chr4_4:50526685-50526704 | Msa0686200:CDS | 25.0% |
| !! | AATGGTAACAAATTTTGTAG+CGG | + | chr4_4:50526813-50526832 | None:intergenic | 25.0% |
| ! | GCTTCAGAAAAATAACTTAA+TGG | + | chr4_4:50526831-50526850 | None:intergenic | 25.0% |
| !! | GTAAAGTATTATTTGTCTCT+CGG | - | chr4_4:50527063-50527082 | Msa0686200:CDS | 25.0% |
| ! | TCAAAATATCATTGATACCT+CGG | + | chr4_4:50527225-50527244 | None:intergenic | 25.0% |
| ! | AGATGAAGAATTTAACAACA+TGG | - | chr4_4:50527443-50527462 | Msa0686200:intron | 25.0% |
| ! | ATCATAATTCTTCTTCTCTA+AGG | - | chr4_4:50527670-50527689 | Msa0686200:intron | 25.0% |
| !!! | ATTTTTGTTTAATAGGACAG+AGG | + | chr4_4:50527752-50527771 | None:intergenic | 25.0% |
| !! | TAACAATACTAAAGAGCATA+TGG | + | chr4_4:50528074-50528093 | None:intergenic | 25.0% |
| !!! | TGTTAGTGTTTTTTTGTGTA+AGG | + | chr4_4:50524595-50524614 | None:intergenic | 25.0% |
| !!! | TTTTAAAGAAGCAATGAGAA+AGG | - | chr4_4:50524859-50524878 | Msa0686200:intron | 25.0% |
| ! | TTTAAAGAAGCAATGAGAAA+GGG | - | chr4_4:50524860-50524879 | Msa0686200:intron | 25.0% |
| !!! | CGAATTCGACTTTTAATTTA+AGG | - | chr4_4:50524987-50525006 | Msa0686200:intron | 25.0% |
| ! | TTATCTATGAAGAATTGACA+CGG | - | chr4_4:50525103-50525122 | Msa0686200:intron | 25.0% |
| ! | ACTCTAATAAAAAATGTGTC+CGG | + | chr4_4:50525219-50525238 | None:intergenic | 25.0% |
| !!! | TCAAAATAGGCATTGAAATT+TGG | + | chr4_4:50525429-50525448 | None:intergenic | 25.0% |
| ! | AGAGTGAATGTAATCAAAAT+AGG | + | chr4_4:50525442-50525461 | None:intergenic | 25.0% |
| !! | GTTGATTATTTAGAGTTTAC+TGG | - | chr4_4:50525973-50525992 | Msa0686200:CDS | 25.0% |
| ! | TTTAGGAAAATCAAAAACCA+TGG | + | chr4_4:50526127-50526146 | None:intergenic | 25.0% |
| ! | ATGCAACAATTGTAAATTTC+AGG | - | chr4_4:50526291-50526310 | Msa0686200:CDS | 25.0% |
| ! | GTTGATTACTTGAAAGAATT+TGG | - | chr4_4:50526313-50526332 | Msa0686200:CDS | 25.0% |
| ! | GTTAAGTATCTGTACTATTA+TGG | - | chr4_4:50526421-50526440 | Msa0686200:intron | 25.0% |
| ! | AATGCTTACAATTAAACCAA+TGG | - | chr4_4:50526468-50526487 | Msa0686200:intron | 25.0% |
| !! | ATTGTCAGTATTTTATCATC+AGG | + | chr4_4:50526642-50526661 | None:intergenic | 25.0% |
| !!! | TAAAGTTTTTTCAGGACTTA+GGG | - | chr4_4:50526685-50526704 | Msa0686200:CDS | 25.0% |
| !! | AATGGTAACAAATTTTGTAG+CGG | + | chr4_4:50526813-50526832 | None:intergenic | 25.0% |
| ! | GCTTCAGAAAAATAACTTAA+TGG | + | chr4_4:50526831-50526850 | None:intergenic | 25.0% |
| !! | GTAAAGTATTATTTGTCTCT+CGG | - | chr4_4:50527063-50527082 | Msa0686200:CDS | 25.0% |
| ! | TCAAAATATCATTGATACCT+CGG | + | chr4_4:50527225-50527244 | None:intergenic | 25.0% |
| ! | AGATGAAGAATTTAACAACA+TGG | - | chr4_4:50527443-50527462 | Msa0686200:intron | 25.0% |
| ! | ATCATAATTCTTCTTCTCTA+AGG | - | chr4_4:50527670-50527689 | Msa0686200:intron | 25.0% |
| !!! | ATTTTTGTTTAATAGGACAG+AGG | + | chr4_4:50527752-50527771 | None:intergenic | 25.0% |
| !! | TAACAATACTAAAGAGCATA+TGG | + | chr4_4:50528074-50528093 | None:intergenic | 25.0% |
| !!! | AGTTTGATTTTTTCTTCGTG+AGG | + | chr4_4:50524653-50524672 | None:intergenic | 30.0% |
| ATACTGGTAATTTGGTTGAT+AGG | - | chr4_4:50524900-50524919 | Msa0686200:intron | 30.0% | |
| TGCTAATTTGAAAAGATTGC+CGG | - | chr4_4:50524958-50524977 | Msa0686200:intron | 30.0% | |
| AAAGTCGAATTCGAATATTC+CGG | + | chr4_4:50524980-50524999 | None:intergenic | 30.0% | |
| ! | TGCGTTAAATTATTGATAGC+AGG | - | chr4_4:50525676-50525695 | Msa0686200:intron | 30.0% |
| GATTTCTTCAATTCTCTAGA+TGG | - | chr4_4:50525758-50525777 | Msa0686200:intron | 30.0% | |
| TTTGTTAAGGGAGAGTTTAT+TGG | - | chr4_4:50525886-50525905 | Msa0686200:CDS | 30.0% | |
| TTGTTAAGGGAGAGTTTATT+GGG | - | chr4_4:50525887-50525906 | Msa0686200:CDS | 30.0% | |
| AAGCTGTAAGATAACAACTT+CGG | + | chr4_4:50526039-50526058 | None:intergenic | 30.0% | |
| !! | TTTGATTTTCCTAAAGCTCT+CGG | - | chr4_4:50526132-50526151 | Msa0686200:intron | 30.0% |
| TAGTACAGATACTTAACAAG+AGG | + | chr4_4:50526418-50526437 | None:intergenic | 30.0% | |
| !!! | CATGAAGGTAAAGTTTTTTC+AGG | - | chr4_4:50526677-50526696 | Msa0686200:CDS | 30.0% |
| !!! | GTAAAGTTTTTTCAGGACTT+AGG | - | chr4_4:50526684-50526703 | Msa0686200:CDS | 30.0% |
| !!! | AAAGTTTTTTCAGGACTTAG+GGG | - | chr4_4:50526686-50526705 | Msa0686200:CDS | 30.0% |
| AAAGAAAAAAGACATACCAC+AGG | + | chr4_4:50526789-50526808 | None:intergenic | 30.0% | |
| AATCAGAGTGATAAACTTTG+TGG | + | chr4_4:50526863-50526882 | None:intergenic | 30.0% | |
| TTATAAACTGTCTGATCAAG+AGG | - | chr4_4:50526888-50526907 | Msa0686200:CDS | 30.0% | |
| !! | TGAGTTTGCTTGTTGTATAT+AGG | - | chr4_4:50526930-50526949 | Msa0686200:CDS | 30.0% |
| CACTGAAGAAAATATTCCAA+AGG | - | chr4_4:50526981-50527000 | Msa0686200:CDS | 30.0% | |
| TTGCGCAAATAAGTATACTT+AGG | + | chr4_4:50527165-50527184 | None:intergenic | 30.0% | |
| TGACAGTAGATTGAAGTTTA+TGG | + | chr4_4:50527491-50527510 | None:intergenic | 30.0% | |
| TCTTACTGTATTAACTTCAC+TGG | - | chr4_4:50527625-50527644 | Msa0686200:intron | 30.0% | |
| GAAATAACTCAGTAGAGAAA+AGG | - | chr4_4:50527722-50527741 | Msa0686200:intron | 30.0% | |
| ! | TACTAGTACCCCTTTTATTA+AGG | - | chr4_4:50527976-50527995 | Msa0686200:intron | 30.0% |
| ! | ACTAGTACCCCTTTTATTAA+GGG | - | chr4_4:50527977-50527996 | Msa0686200:intron | 30.0% |
| TTATTTGCATAAGCACTTGT+GGG | - | chr4_4:50528014-50528033 | Msa0686200:CDS | 30.0% | |
| !! | AATTTGAGTGTTGATCTTTC+AGG | + | chr4_4:50528407-50528426 | None:intergenic | 30.0% |
| !!! | TACGTTGCTTGCTTTTTATA+TGG | - | chr4_4:50528494-50528513 | Msa0686200:CDS | 30.0% |
| !!! | ACGTTGCTTGCTTTTTATAT+GGG | - | chr4_4:50528495-50528514 | Msa0686200:CDS | 30.0% |
| AGAGATAGCCATGTTATATA+TGG | + | chr4_4:50528668-50528687 | None:intergenic | 30.0% | |
| !!! | AGTTTGATTTTTTCTTCGTG+AGG | + | chr4_4:50524653-50524672 | None:intergenic | 30.0% |
| ATACTGGTAATTTGGTTGAT+AGG | - | chr4_4:50524900-50524919 | Msa0686200:intron | 30.0% | |
| TGCTAATTTGAAAAGATTGC+CGG | - | chr4_4:50524958-50524977 | Msa0686200:intron | 30.0% | |
| AAAGTCGAATTCGAATATTC+CGG | + | chr4_4:50524980-50524999 | None:intergenic | 30.0% | |
| ! | TGCGTTAAATTATTGATAGC+AGG | - | chr4_4:50525676-50525695 | Msa0686200:intron | 30.0% |
| GATTTCTTCAATTCTCTAGA+TGG | - | chr4_4:50525758-50525777 | Msa0686200:intron | 30.0% | |
| TTTGTTAAGGGAGAGTTTAT+TGG | - | chr4_4:50525886-50525905 | Msa0686200:CDS | 30.0% | |
| TTGTTAAGGGAGAGTTTATT+GGG | - | chr4_4:50525887-50525906 | Msa0686200:CDS | 30.0% | |
| AAGCTGTAAGATAACAACTT+CGG | + | chr4_4:50526039-50526058 | None:intergenic | 30.0% | |
| !! | TTTGATTTTCCTAAAGCTCT+CGG | - | chr4_4:50526132-50526151 | Msa0686200:intron | 30.0% |
| TAGTACAGATACTTAACAAG+AGG | + | chr4_4:50526418-50526437 | None:intergenic | 30.0% | |
| !!! | CATGAAGGTAAAGTTTTTTC+AGG | - | chr4_4:50526677-50526696 | Msa0686200:CDS | 30.0% |
| !!! | GTAAAGTTTTTTCAGGACTT+AGG | - | chr4_4:50526684-50526703 | Msa0686200:CDS | 30.0% |
| !!! | AAAGTTTTTTCAGGACTTAG+GGG | - | chr4_4:50526686-50526705 | Msa0686200:CDS | 30.0% |
| AAAGAAAAAAGACATACCAC+AGG | + | chr4_4:50526789-50526808 | None:intergenic | 30.0% | |
| AATCAGAGTGATAAACTTTG+TGG | + | chr4_4:50526863-50526882 | None:intergenic | 30.0% | |
| TTATAAACTGTCTGATCAAG+AGG | - | chr4_4:50526888-50526907 | Msa0686200:CDS | 30.0% | |
| !! | TGAGTTTGCTTGTTGTATAT+AGG | - | chr4_4:50526930-50526949 | Msa0686200:CDS | 30.0% |
| CACTGAAGAAAATATTCCAA+AGG | - | chr4_4:50526981-50527000 | Msa0686200:CDS | 30.0% | |
| TTGCGCAAATAAGTATACTT+AGG | + | chr4_4:50527165-50527184 | None:intergenic | 30.0% | |
| TGACAGTAGATTGAAGTTTA+TGG | + | chr4_4:50527491-50527510 | None:intergenic | 30.0% | |
| TCTTACTGTATTAACTTCAC+TGG | - | chr4_4:50527625-50527644 | Msa0686200:intron | 30.0% | |
| GAAATAACTCAGTAGAGAAA+AGG | - | chr4_4:50527722-50527741 | Msa0686200:intron | 30.0% | |
| ! | TACTAGTACCCCTTTTATTA+AGG | - | chr4_4:50527976-50527995 | Msa0686200:intron | 30.0% |
| ! | ACTAGTACCCCTTTTATTAA+GGG | - | chr4_4:50527977-50527996 | Msa0686200:intron | 30.0% |
| TTATTTGCATAAGCACTTGT+GGG | - | chr4_4:50528014-50528033 | Msa0686200:CDS | 30.0% | |
| !! | AATTTGAGTGTTGATCTTTC+AGG | + | chr4_4:50528407-50528426 | None:intergenic | 30.0% |
| !!! | TACGTTGCTTGCTTTTTATA+TGG | - | chr4_4:50528494-50528513 | Msa0686200:CDS | 30.0% |
| !!! | ACGTTGCTTGCTTTTTATAT+GGG | - | chr4_4:50528495-50528514 | Msa0686200:CDS | 30.0% |
| AGAGATAGCCATGTTATATA+TGG | + | chr4_4:50528668-50528687 | None:intergenic | 30.0% | |
| ! | GATTTTGCATTGTGTCTTCT+GGG | + | chr4_4:50524551-50524570 | None:intergenic | 35.0% |
| ! | TGATTTTGCATTGTGTCTTC+TGG | + | chr4_4:50524552-50524571 | None:intergenic | 35.0% |
| !!! | TTTTTTCTTCGTGAGGTGTT+GGG | + | chr4_4:50524646-50524665 | None:intergenic | 35.0% |
| !!! | ATTTTTTCTTCGTGAGGTGT+TGG | + | chr4_4:50524647-50524666 | None:intergenic | 35.0% |
| ! | TGGGGTTCTTTTTCTTACTA+AGG | + | chr4_4:50524687-50524706 | None:intergenic | 35.0% |
| AAATTGAACCTGGAAACTGT+GGG | + | chr4_4:50524706-50524725 | None:intergenic | 35.0% | |
| TAAATTGAACCTGGAAACTG+TGG | + | chr4_4:50524707-50524726 | None:intergenic | 35.0% | |
| AGAAGAAGAGGGAATGATTA+TGG | - | chr4_4:50524799-50524818 | Msa0686200:intron | 35.0% | |
| GCAATGAGAAAGGGTAAATT+TGG | - | chr4_4:50524869-50524888 | Msa0686200:intron | 35.0% | |
| !! | TGGTAATTTGGTTGATAGGT+TGG | - | chr4_4:50524904-50524923 | Msa0686200:intron | 35.0% |
| !! | GGTAATTTGGTTGATAGGTT+GGG | - | chr4_4:50524905-50524924 | Msa0686200:intron | 35.0% |
| TAACCATGATACCTGATAAG+TGG | + | chr4_4:50525046-50525065 | None:intergenic | 35.0% | |
| ATACACACAACACAACAAGT+TGG | + | chr4_4:50525316-50525335 | None:intergenic | 35.0% | |
| TGTTGTGTTGTGTGTATTGT+TGG | - | chr4_4:50525319-50525338 | Msa0686200:three_prime_UTR | 35.0% | |
| GTTGTGTGTATTGTTGGAAA+TGG | - | chr4_4:50525325-50525344 | Msa0686200:three_prime_UTR | 35.0% | |
| ACTGTCAGATTTCATTCCAA+CGG | + | chr4_4:50525406-50525425 | None:intergenic | 35.0% | |
| TGAGTCTCATCACTTTATGT+GGG | - | chr4_4:50525482-50525501 | Msa0686200:exon | 35.0% | |
| ! | CTAGCACTCACTCTTTTATT+CGG | + | chr4_4:50525544-50525563 | None:intergenic | 35.0% |
| TGTGATCATTGGATCGAAAT+CGG | + | chr4_4:50525645-50525664 | None:intergenic | 35.0% | |
| CTAACAACAATACGCAAACT+TGG | + | chr4_4:50525706-50525725 | None:intergenic | 35.0% | |
| AAAATGAGCTTAGCTATCTG+AGG | + | chr4_4:50525808-50525827 | None:intergenic | 35.0% | |
| !! | AAGCTCATTTTGATGTCAAG+AGG | - | chr4_4:50525817-50525836 | Msa0686200:CDS | 35.0% |
| !! | AGCTCATTTTGATGTCAAGA+GGG | - | chr4_4:50525818-50525837 | Msa0686200:CDS | 35.0% |
| ! | TTGAAGTCGGTGTTTGTTAA+GGG | - | chr4_4:50525874-50525893 | Msa0686200:CDS | 35.0% |
| TGTTAAGGGAGAGTTTATTG+GGG | - | chr4_4:50525888-50525907 | Msa0686200:CDS | 35.0% | |
| ! | ATTTAGAGTTTACTGGAGTC+AGG | - | chr4_4:50525980-50525999 | Msa0686200:CDS | 35.0% |
| GAAGTTGTTATCTTACAGCT+TGG | - | chr4_4:50526038-50526057 | Msa0686200:CDS | 35.0% | |
| AAGTATGAGAGAAGACAACA+AGG | + | chr4_4:50526241-50526260 | None:intergenic | 35.0% | |
| AGAATTTGGGCTTGAAAGTA+AGG | - | chr4_4:50526327-50526346 | Msa0686200:CDS | 35.0% | |
| TTGGTAAGTTGCTTGCATTT+CGG | - | chr4_4:50526353-50526372 | Msa0686200:intron | 35.0% | |
| AAGTCAACACAAAAGACCAT+TGG | + | chr4_4:50526487-50526506 | None:intergenic | 35.0% | |
| GGAAACATAACAGAAACCAT+TGG | + | chr4_4:50526621-50526640 | None:intergenic | 35.0% | |
| ! | GGGAAATTTTACAAGCATGT+TGG | + | chr4_4:50526730-50526749 | None:intergenic | 35.0% |
| ACAGCCTTTACAAGAAGATT+AGG | - | chr4_4:50526763-50526782 | Msa0686200:intron | 35.0% | |
| ! | CTCAGCAGATTAGTTAATTC+AGG | + | chr4_4:50526914-50526933 | None:intergenic | 35.0% |
| ATTCCAAAGGTTATAGCTCT+TGG | - | chr4_4:50526994-50527013 | Msa0686200:CDS | 35.0% | |
| AGCATAGTACATAAGCTTGA+AGG | - | chr4_4:50527036-50527055 | Msa0686200:CDS | 35.0% | |
| TATTGTATCTGAGCAGCATT+GGG | + | chr4_4:50527128-50527147 | None:intergenic | 35.0% | |
| TACTTATTTGCGCAAAACCA+TGG | - | chr4_4:50527170-50527189 | Msa0686200:CDS | 35.0% | |
| TCGAATTATTCCAAGACACA+AGG | - | chr4_4:50527368-50527387 | Msa0686200:intron | 35.0% | |
| TCAATCTACTGTCATGAAAG+AGG | - | chr4_4:50527497-50527516 | Msa0686200:intron | 35.0% | |
| !!! | CGGTTTTTGTTTTTACGTCT+GGG | + | chr4_4:50527547-50527566 | None:intergenic | 35.0% |
| !!! | TCGGTTTTTGTTTTTACGTC+TGG | + | chr4_4:50527548-50527567 | None:intergenic | 35.0% |
| GACGTAAAAACAAAAACCGA+TGG | - | chr4_4:50527548-50527567 | Msa0686200:intron | 35.0% | |
| !! | TAATTCTTCTTCTCTAAGGC+AGG | - | chr4_4:50527674-50527693 | Msa0686200:intron | 35.0% |
| ! | AATTGCTAAAGAGTGTGCTT+GGG | - | chr4_4:50527822-50527841 | Msa0686200:intron | 35.0% |
| TGTGCCAATGAATAGAATTG+CGG | - | chr4_4:50527862-50527881 | Msa0686200:intron | 35.0% | |
| CAACAAGCCCTTAATAAAAG+GGG | + | chr4_4:50527987-50528006 | None:intergenic | 35.0% | |
| CCAACAAGCCCTTAATAAAA+GGG | + | chr4_4:50527988-50528007 | None:intergenic | 35.0% | |
| TCCAACAAGCCCTTAATAAA+AGG | + | chr4_4:50527989-50528008 | None:intergenic | 35.0% | |
| !! | TTATTAAGGGCTTGTTGGAT+TGG | - | chr4_4:50527990-50528009 | Msa0686200:CDS | 35.0% |
| CTTATTTGCATAAGCACTTG+TGG | - | chr4_4:50528013-50528032 | Msa0686200:CDS | 35.0% | |
| TCTTAACTGCGATGATATGT+CGG | + | chr4_4:50528334-50528353 | None:intergenic | 35.0% | |
| !!! | CGTTGCTTGCTTTTTATATG+GGG | - | chr4_4:50528496-50528515 | Msa0686200:CDS | 35.0% |
| !!! | GTTGCTTGCTTTTTATATGG+GGG | - | chr4_4:50528497-50528516 | Msa0686200:CDS | 35.0% |
| GCAAGAAGATATCATTCTCA+AGG | - | chr4_4:50528571-50528590 | Msa0686200:intron | 35.0% | |
| ! | GATTTTGCATTGTGTCTTCT+GGG | + | chr4_4:50524551-50524570 | None:intergenic | 35.0% |
| ! | TGATTTTGCATTGTGTCTTC+TGG | + | chr4_4:50524552-50524571 | None:intergenic | 35.0% |
| !!! | TTTTTTCTTCGTGAGGTGTT+GGG | + | chr4_4:50524646-50524665 | None:intergenic | 35.0% |
| !!! | ATTTTTTCTTCGTGAGGTGT+TGG | + | chr4_4:50524647-50524666 | None:intergenic | 35.0% |
| ! | TGGGGTTCTTTTTCTTACTA+AGG | + | chr4_4:50524687-50524706 | None:intergenic | 35.0% |
| AAATTGAACCTGGAAACTGT+GGG | + | chr4_4:50524706-50524725 | None:intergenic | 35.0% | |
| TAAATTGAACCTGGAAACTG+TGG | + | chr4_4:50524707-50524726 | None:intergenic | 35.0% | |
| AGAAGAAGAGGGAATGATTA+TGG | - | chr4_4:50524799-50524818 | Msa0686200:intron | 35.0% | |
| GCAATGAGAAAGGGTAAATT+TGG | - | chr4_4:50524869-50524888 | Msa0686200:intron | 35.0% | |
| !! | TGGTAATTTGGTTGATAGGT+TGG | - | chr4_4:50524904-50524923 | Msa0686200:intron | 35.0% |
| !! | GGTAATTTGGTTGATAGGTT+GGG | - | chr4_4:50524905-50524924 | Msa0686200:intron | 35.0% |
| TAACCATGATACCTGATAAG+TGG | + | chr4_4:50525046-50525065 | None:intergenic | 35.0% | |
| ATACACACAACACAACAAGT+TGG | + | chr4_4:50525316-50525335 | None:intergenic | 35.0% | |
| TGTTGTGTTGTGTGTATTGT+TGG | - | chr4_4:50525319-50525338 | Msa0686200:three_prime_UTR | 35.0% | |
| GTTGTGTGTATTGTTGGAAA+TGG | - | chr4_4:50525325-50525344 | Msa0686200:three_prime_UTR | 35.0% | |
| ACTGTCAGATTTCATTCCAA+CGG | + | chr4_4:50525406-50525425 | None:intergenic | 35.0% | |
| TGAGTCTCATCACTTTATGT+GGG | - | chr4_4:50525482-50525501 | Msa0686200:exon | 35.0% | |
| ! | CTAGCACTCACTCTTTTATT+CGG | + | chr4_4:50525544-50525563 | None:intergenic | 35.0% |
| TGTGATCATTGGATCGAAAT+CGG | + | chr4_4:50525645-50525664 | None:intergenic | 35.0% | |
| CTAACAACAATACGCAAACT+TGG | + | chr4_4:50525706-50525725 | None:intergenic | 35.0% | |
| AAAATGAGCTTAGCTATCTG+AGG | + | chr4_4:50525808-50525827 | None:intergenic | 35.0% | |
| !! | AAGCTCATTTTGATGTCAAG+AGG | - | chr4_4:50525817-50525836 | Msa0686200:CDS | 35.0% |
| !! | AGCTCATTTTGATGTCAAGA+GGG | - | chr4_4:50525818-50525837 | Msa0686200:CDS | 35.0% |
| ! | TTGAAGTCGGTGTTTGTTAA+GGG | - | chr4_4:50525874-50525893 | Msa0686200:CDS | 35.0% |
| TGTTAAGGGAGAGTTTATTG+GGG | - | chr4_4:50525888-50525907 | Msa0686200:CDS | 35.0% | |
| ! | ATTTAGAGTTTACTGGAGTC+AGG | - | chr4_4:50525980-50525999 | Msa0686200:CDS | 35.0% |
| GAAGTTGTTATCTTACAGCT+TGG | - | chr4_4:50526038-50526057 | Msa0686200:CDS | 35.0% | |
| AAGTATGAGAGAAGACAACA+AGG | + | chr4_4:50526241-50526260 | None:intergenic | 35.0% | |
| AGAATTTGGGCTTGAAAGTA+AGG | - | chr4_4:50526327-50526346 | Msa0686200:CDS | 35.0% | |
| TTGGTAAGTTGCTTGCATTT+CGG | - | chr4_4:50526353-50526372 | Msa0686200:intron | 35.0% | |
| AAGTCAACACAAAAGACCAT+TGG | + | chr4_4:50526487-50526506 | None:intergenic | 35.0% | |
| GGAAACATAACAGAAACCAT+TGG | + | chr4_4:50526621-50526640 | None:intergenic | 35.0% | |
| ! | GGGAAATTTTACAAGCATGT+TGG | + | chr4_4:50526730-50526749 | None:intergenic | 35.0% |
| ACAGCCTTTACAAGAAGATT+AGG | - | chr4_4:50526763-50526782 | Msa0686200:intron | 35.0% | |
| ! | CTCAGCAGATTAGTTAATTC+AGG | + | chr4_4:50526914-50526933 | None:intergenic | 35.0% |
| ATTCCAAAGGTTATAGCTCT+TGG | - | chr4_4:50526994-50527013 | Msa0686200:CDS | 35.0% | |
| AGCATAGTACATAAGCTTGA+AGG | - | chr4_4:50527036-50527055 | Msa0686200:CDS | 35.0% | |
| TATTGTATCTGAGCAGCATT+GGG | + | chr4_4:50527128-50527147 | None:intergenic | 35.0% | |
| TACTTATTTGCGCAAAACCA+TGG | - | chr4_4:50527170-50527189 | Msa0686200:CDS | 35.0% | |
| TCGAATTATTCCAAGACACA+AGG | - | chr4_4:50527368-50527387 | Msa0686200:intron | 35.0% | |
| TCAATCTACTGTCATGAAAG+AGG | - | chr4_4:50527497-50527516 | Msa0686200:intron | 35.0% | |
| !!! | CGGTTTTTGTTTTTACGTCT+GGG | + | chr4_4:50527547-50527566 | None:intergenic | 35.0% |
| !!! | TCGGTTTTTGTTTTTACGTC+TGG | + | chr4_4:50527548-50527567 | None:intergenic | 35.0% |
| GACGTAAAAACAAAAACCGA+TGG | - | chr4_4:50527548-50527567 | Msa0686200:intron | 35.0% | |
| !! | TAATTCTTCTTCTCTAAGGC+AGG | - | chr4_4:50527674-50527693 | Msa0686200:intron | 35.0% |
| ! | AATTGCTAAAGAGTGTGCTT+GGG | - | chr4_4:50527822-50527841 | Msa0686200:intron | 35.0% |
| TGTGCCAATGAATAGAATTG+CGG | - | chr4_4:50527862-50527881 | Msa0686200:intron | 35.0% | |
| CAACAAGCCCTTAATAAAAG+GGG | + | chr4_4:50527987-50528006 | None:intergenic | 35.0% | |
| CCAACAAGCCCTTAATAAAA+GGG | + | chr4_4:50527988-50528007 | None:intergenic | 35.0% | |
| TCCAACAAGCCCTTAATAAA+AGG | + | chr4_4:50527989-50528008 | None:intergenic | 35.0% | |
| !! | TTATTAAGGGCTTGTTGGAT+TGG | - | chr4_4:50527990-50528009 | Msa0686200:CDS | 35.0% |
| CTTATTTGCATAAGCACTTG+TGG | - | chr4_4:50528013-50528032 | Msa0686200:CDS | 35.0% | |
| TCTTAACTGCGATGATATGT+CGG | + | chr4_4:50528334-50528353 | None:intergenic | 35.0% | |
| !!! | CGTTGCTTGCTTTTTATATG+GGG | - | chr4_4:50528496-50528515 | Msa0686200:CDS | 35.0% |
| !!! | GTTGCTTGCTTTTTATATGG+GGG | - | chr4_4:50528497-50528516 | Msa0686200:CDS | 35.0% |
| GCAAGAAGATATCATTCTCA+AGG | - | chr4_4:50528571-50528590 | Msa0686200:intron | 35.0% | |
| !!! | GGTGAGTTTTGGGTTTTTGA+GGG | + | chr4_4:50524477-50524496 | None:intergenic | 40.0% |
| !!! | TGGTGAGTTTTGGGTTTTTG+AGG | + | chr4_4:50524478-50524497 | None:intergenic | 40.0% |
| !!! | GGTTTTGGTGTTGTTCGTTT+GGG | + | chr4_4:50524520-50524539 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGTGTTGTTCGTT+TGG | + | chr4_4:50524521-50524540 | None:intergenic | 40.0% |
| !!! | TTCTGGGAATTGGTTGGTTT+TGG | + | chr4_4:50524535-50524554 | None:intergenic | 40.0% |
| TCTTGTAGTGAAGTGGATGA+AGG | + | chr4_4:50524623-50524642 | None:intergenic | 40.0% | |
| AATTGAACCTGGAAACTGTG+GGG | + | chr4_4:50524705-50524724 | None:intergenic | 40.0% | |
| GATTGAGCGTAAATTGAACC+TGG | + | chr4_4:50524716-50524735 | None:intergenic | 40.0% | |
| ! | CTCCACTGAGTAACCTTTTT+CGG | - | chr4_4:50524768-50524787 | Msa0686200:intron | 40.0% |
| CTTCTTCATCACACCGAAAA+AGG | + | chr4_4:50524784-50524803 | None:intergenic | 40.0% | |
| TGGAAGCTATTGAGATTCGT+AGG | - | chr4_4:50524819-50524838 | Msa0686200:intron | 40.0% | |
| AGCTATTGAGATTCGTAGGA+AGG | - | chr4_4:50524823-50524842 | Msa0686200:intron | 40.0% | |
| !! | AATTTGGTTGATAGGTTGGG+TGG | - | chr4_4:50524908-50524927 | Msa0686200:intron | 40.0% |
| TACCGATGTCAATGTGTCAA+TGG | + | chr4_4:50525141-50525160 | None:intergenic | 40.0% | |
| ATTAGAGTTGTCTGTGCAGA+AGG | - | chr4_4:50525231-50525250 | Msa0686200:three_prime_UTR | 40.0% | |
| ! | AATGCGTCGATGACGATTAT+TGG | + | chr4_4:50525361-50525380 | None:intergenic | 40.0% |
| TCACTCATTCAGCACATATG+TGG | - | chr4_4:50525380-50525399 | Msa0686200:three_prime_UTR | 40.0% | |
| GTGAGTCTCATCACTTTATG+TGG | - | chr4_4:50525481-50525500 | Msa0686200:exon | 40.0% | |
| GTCAACACATCTGTGATCAT+TGG | + | chr4_4:50525656-50525675 | None:intergenic | 40.0% | |
| GAGGGAAACTTGAGTCTATA+AGG | - | chr4_4:50525836-50525855 | Msa0686200:CDS | 40.0% | |
| ! | GTTGAAGTCGGTGTTTGTTA+AGG | - | chr4_4:50525873-50525892 | Msa0686200:CDS | 40.0% |
| ! | GTGGAGATAATGTTTTGCTG+CGG | - | chr4_4:50525926-50525945 | Msa0686200:CDS | 40.0% |
| TGTGCAGTTCTATCTGGATA+TGG | - | chr4_4:50526077-50526096 | Msa0686200:intron | 40.0% | |
| GTGCAGTTCTATCTGGATAT+GGG | - | chr4_4:50526078-50526097 | Msa0686200:intron | 40.0% | |
| ! | GGTTTAGATGCGAAGGATTT+TGG | - | chr4_4:50526099-50526118 | Msa0686200:intron | 40.0% |
| TTTGGAAGAAATGAGCCGAA+AGG | - | chr4_4:50526164-50526183 | Msa0686200:intron | 40.0% | |
| TATTATGGGATTACCCGAGA+TGG | - | chr4_4:50526436-50526455 | Msa0686200:intron | 40.0% | |
| ATTATGGGATTACCCGAGAT+GGG | - | chr4_4:50526437-50526456 | Msa0686200:intron | 40.0% | |
| AGAGATGACTATTGTGCCAA+AGG | - | chr4_4:50526507-50526526 | Msa0686200:intron | 40.0% | |
| GACTTAGGGGTTCAAAATGA+CGG | - | chr4_4:50526699-50526718 | Msa0686200:CDS | 40.0% | |
| ACTTAGGGGTTCAAAATGAC+GGG | - | chr4_4:50526700-50526719 | Msa0686200:CDS | 40.0% | |
| CAGGCCTAATCTTCTTGTAA+AGG | + | chr4_4:50526770-50526789 | None:intergenic | 40.0% | |
| TTACAAGAAGATTAGGCCTG+TGG | - | chr4_4:50526770-50526789 | Msa0686200:intron | 40.0% | |
| CAGAGTGATAAACTTTGTGG+TGG | + | chr4_4:50526860-50526879 | None:intergenic | 40.0% | |
| GGTCATATTCTTGTTGACCA+AGG | - | chr4_4:50526951-50526970 | Msa0686200:CDS | 40.0% | |
| ATATTCTTGTTGACCAAGGC+TGG | - | chr4_4:50526955-50526974 | Msa0686200:CDS | 40.0% | |
| GTATTGTATCTGAGCAGCAT+TGG | + | chr4_4:50527129-50527148 | None:intergenic | 40.0% | |
| CAATGACATCGTGCAAAGTT+CGG | + | chr4_4:50527197-50527216 | None:intergenic | 40.0% | |
| !! | GCAATTCTCTTGCTGTTATC+AGG | - | chr4_4:50527322-50527341 | Msa0686200:intron | 40.0% |
| !! | TTTTTCAGCTATTCCCTCGA+GGG | - | chr4_4:50527345-50527364 | Msa0686200:intron | 40.0% |
| TATTCCAAGACACAAGGTTC+TGG | - | chr4_4:50527374-50527393 | Msa0686200:intron | 40.0% | |
| ACTTGCAATTTATCATCCGC+TGG | - | chr4_4:50527775-50527794 | Msa0686200:intron | 40.0% | |
| CTTGCAATTTATCATCCGCT+GGG | - | chr4_4:50527776-50527795 | Msa0686200:intron | 40.0% | |
| ! | CAATTGCTAAAGAGTGTGCT+TGG | - | chr4_4:50527821-50527840 | Msa0686200:intron | 40.0% |
| GTCTCCGCAATTCTATTCAT+TGG | + | chr4_4:50527869-50527888 | None:intergenic | 40.0% | |
| ! | TAGACAGTGCAAGAAGTACA+CGG | + | chr4_4:50527897-50527916 | None:intergenic | 40.0% |
| ACTTCTTGCACTGTCTAAGA+TGG | - | chr4_4:50527900-50527919 | Msa0686200:intron | 40.0% | |
| ! | GCACTGTCTAAGATGGTTTA+AGG | - | chr4_4:50527907-50527926 | Msa0686200:intron | 40.0% |
| ! | CCCTTTTATTAAGGGCTTGT+TGG | - | chr4_4:50527985-50528004 | Msa0686200:CDS | 40.0% |
| !!! | TACGACTTTTTTCCCCTGAT+AGG | - | chr4_4:50528265-50528284 | Msa0686200:CDS | 40.0% |
| ! | TTTTCCCCTGATAGGAATTG+TGG | - | chr4_4:50528273-50528292 | Msa0686200:CDS | 40.0% |
| TCTTCCACAATTCCTATCAG+GGG | + | chr4_4:50528280-50528299 | None:intergenic | 40.0% | |
| GTCTTCCACAATTCCTATCA+GGG | + | chr4_4:50528281-50528300 | None:intergenic | 40.0% | |
| AGTCTTCCACAATTCCTATC+AGG | + | chr4_4:50528282-50528301 | None:intergenic | 40.0% | |
| TGATATCTTCTTGCGCTTGT+GGG | + | chr4_4:50528565-50528584 | None:intergenic | 40.0% | |
| ATGATATCTTCTTGCGCTTG+TGG | + | chr4_4:50528566-50528585 | None:intergenic | 40.0% | |
| !!! | GGTGAGTTTTGGGTTTTTGA+GGG | + | chr4_4:50524477-50524496 | None:intergenic | 40.0% |
| !!! | TGGTGAGTTTTGGGTTTTTG+AGG | + | chr4_4:50524478-50524497 | None:intergenic | 40.0% |
| !!! | GGTTTTGGTGTTGTTCGTTT+GGG | + | chr4_4:50524520-50524539 | None:intergenic | 40.0% |
| !!! | TGGTTTTGGTGTTGTTCGTT+TGG | + | chr4_4:50524521-50524540 | None:intergenic | 40.0% |
| !!! | TTCTGGGAATTGGTTGGTTT+TGG | + | chr4_4:50524535-50524554 | None:intergenic | 40.0% |
| TCTTGTAGTGAAGTGGATGA+AGG | + | chr4_4:50524623-50524642 | None:intergenic | 40.0% | |
| AATTGAACCTGGAAACTGTG+GGG | + | chr4_4:50524705-50524724 | None:intergenic | 40.0% | |
| GATTGAGCGTAAATTGAACC+TGG | + | chr4_4:50524716-50524735 | None:intergenic | 40.0% | |
| ! | CTCCACTGAGTAACCTTTTT+CGG | - | chr4_4:50524768-50524787 | Msa0686200:intron | 40.0% |
| CTTCTTCATCACACCGAAAA+AGG | + | chr4_4:50524784-50524803 | None:intergenic | 40.0% | |
| TGGAAGCTATTGAGATTCGT+AGG | - | chr4_4:50524819-50524838 | Msa0686200:intron | 40.0% | |
| AGCTATTGAGATTCGTAGGA+AGG | - | chr4_4:50524823-50524842 | Msa0686200:intron | 40.0% | |
| !! | AATTTGGTTGATAGGTTGGG+TGG | - | chr4_4:50524908-50524927 | Msa0686200:intron | 40.0% |
| TACCGATGTCAATGTGTCAA+TGG | + | chr4_4:50525141-50525160 | None:intergenic | 40.0% | |
| ATTAGAGTTGTCTGTGCAGA+AGG | - | chr4_4:50525231-50525250 | Msa0686200:three_prime_UTR | 40.0% | |
| ! | AATGCGTCGATGACGATTAT+TGG | + | chr4_4:50525361-50525380 | None:intergenic | 40.0% |
| TCACTCATTCAGCACATATG+TGG | - | chr4_4:50525380-50525399 | Msa0686200:three_prime_UTR | 40.0% | |
| GTGAGTCTCATCACTTTATG+TGG | - | chr4_4:50525481-50525500 | Msa0686200:exon | 40.0% | |
| GTCAACACATCTGTGATCAT+TGG | + | chr4_4:50525656-50525675 | None:intergenic | 40.0% | |
| GAGGGAAACTTGAGTCTATA+AGG | - | chr4_4:50525836-50525855 | Msa0686200:CDS | 40.0% | |
| ! | GTTGAAGTCGGTGTTTGTTA+AGG | - | chr4_4:50525873-50525892 | Msa0686200:CDS | 40.0% |
| ! | GTGGAGATAATGTTTTGCTG+CGG | - | chr4_4:50525926-50525945 | Msa0686200:CDS | 40.0% |
| TGTGCAGTTCTATCTGGATA+TGG | - | chr4_4:50526077-50526096 | Msa0686200:intron | 40.0% | |
| GTGCAGTTCTATCTGGATAT+GGG | - | chr4_4:50526078-50526097 | Msa0686200:intron | 40.0% | |
| ! | GGTTTAGATGCGAAGGATTT+TGG | - | chr4_4:50526099-50526118 | Msa0686200:intron | 40.0% |
| TTTGGAAGAAATGAGCCGAA+AGG | - | chr4_4:50526164-50526183 | Msa0686200:intron | 40.0% | |
| TATTATGGGATTACCCGAGA+TGG | - | chr4_4:50526436-50526455 | Msa0686200:intron | 40.0% | |
| ATTATGGGATTACCCGAGAT+GGG | - | chr4_4:50526437-50526456 | Msa0686200:intron | 40.0% | |
| AGAGATGACTATTGTGCCAA+AGG | - | chr4_4:50526507-50526526 | Msa0686200:intron | 40.0% | |
| GACTTAGGGGTTCAAAATGA+CGG | - | chr4_4:50526699-50526718 | Msa0686200:CDS | 40.0% | |
| ACTTAGGGGTTCAAAATGAC+GGG | - | chr4_4:50526700-50526719 | Msa0686200:CDS | 40.0% | |
| CAGGCCTAATCTTCTTGTAA+AGG | + | chr4_4:50526770-50526789 | None:intergenic | 40.0% | |
| TTACAAGAAGATTAGGCCTG+TGG | - | chr4_4:50526770-50526789 | Msa0686200:intron | 40.0% | |
| CAGAGTGATAAACTTTGTGG+TGG | + | chr4_4:50526860-50526879 | None:intergenic | 40.0% | |
| GGTCATATTCTTGTTGACCA+AGG | - | chr4_4:50526951-50526970 | Msa0686200:CDS | 40.0% | |
| ATATTCTTGTTGACCAAGGC+TGG | - | chr4_4:50526955-50526974 | Msa0686200:CDS | 40.0% | |
| GTATTGTATCTGAGCAGCAT+TGG | + | chr4_4:50527129-50527148 | None:intergenic | 40.0% | |
| CAATGACATCGTGCAAAGTT+CGG | + | chr4_4:50527197-50527216 | None:intergenic | 40.0% | |
| !! | GCAATTCTCTTGCTGTTATC+AGG | - | chr4_4:50527322-50527341 | Msa0686200:intron | 40.0% |
| !! | TTTTTCAGCTATTCCCTCGA+GGG | - | chr4_4:50527345-50527364 | Msa0686200:intron | 40.0% |
| TATTCCAAGACACAAGGTTC+TGG | - | chr4_4:50527374-50527393 | Msa0686200:intron | 40.0% | |
| ACTTGCAATTTATCATCCGC+TGG | - | chr4_4:50527775-50527794 | Msa0686200:intron | 40.0% | |
| CTTGCAATTTATCATCCGCT+GGG | - | chr4_4:50527776-50527795 | Msa0686200:intron | 40.0% | |
| ! | CAATTGCTAAAGAGTGTGCT+TGG | - | chr4_4:50527821-50527840 | Msa0686200:intron | 40.0% |
| GTCTCCGCAATTCTATTCAT+TGG | + | chr4_4:50527869-50527888 | None:intergenic | 40.0% | |
| ! | TAGACAGTGCAAGAAGTACA+CGG | + | chr4_4:50527897-50527916 | None:intergenic | 40.0% |
| ACTTCTTGCACTGTCTAAGA+TGG | - | chr4_4:50527900-50527919 | Msa0686200:intron | 40.0% | |
| ! | GCACTGTCTAAGATGGTTTA+AGG | - | chr4_4:50527907-50527926 | Msa0686200:intron | 40.0% |
| ! | CCCTTTTATTAAGGGCTTGT+TGG | - | chr4_4:50527985-50528004 | Msa0686200:CDS | 40.0% |
| !!! | TACGACTTTTTTCCCCTGAT+AGG | - | chr4_4:50528265-50528284 | Msa0686200:CDS | 40.0% |
| ! | TTTTCCCCTGATAGGAATTG+TGG | - | chr4_4:50528273-50528292 | Msa0686200:CDS | 40.0% |
| TCTTCCACAATTCCTATCAG+GGG | + | chr4_4:50528280-50528299 | None:intergenic | 40.0% | |
| GTCTTCCACAATTCCTATCA+GGG | + | chr4_4:50528281-50528300 | None:intergenic | 40.0% | |
| AGTCTTCCACAATTCCTATC+AGG | + | chr4_4:50528282-50528301 | None:intergenic | 40.0% | |
| TGATATCTTCTTGCGCTTGT+GGG | + | chr4_4:50528565-50528584 | None:intergenic | 40.0% | |
| ATGATATCTTCTTGCGCTTG+TGG | + | chr4_4:50528566-50528585 | None:intergenic | 40.0% | |
| !!! | GTTTTGGGTTTTTGAGGGTG+TGG | + | chr4_4:50524472-50524491 | None:intergenic | 45.0% |
| !! | TGACGATGGTGGTGAGTTTT+GGG | + | chr4_4:50524487-50524506 | None:intergenic | 45.0% |
| !! | TTGACGATGGTGGTGAGTTT+TGG | + | chr4_4:50524488-50524507 | None:intergenic | 45.0% |
| !!! | GGTGTTGTTCGTTTGGGTTT+TGG | + | chr4_4:50524514-50524533 | None:intergenic | 45.0% |
| ! | TGTGTCTTCTGGGAATTGGT+TGG | + | chr4_4:50524541-50524560 | None:intergenic | 45.0% |
| ! | GCATTGTGTCTTCTGGGAAT+TGG | + | chr4_4:50524545-50524564 | None:intergenic | 45.0% |
| ! | TGTTGGGTCTTGTAGTGAAG+TGG | + | chr4_4:50524630-50524649 | None:intergenic | 45.0% |
| AAAAGAACCCCACAGTTTCC+AGG | - | chr4_4:50524695-50524714 | Msa0686200:three_prime_UTR | 45.0% | |
| ATCTCCAAGTGATCCTGATG+TGG | - | chr4_4:50524733-50524752 | Msa0686200:intron | 45.0% | |
| TCTCCAAGTGATCCTGATGT+GGG | - | chr4_4:50524734-50524753 | Msa0686200:intron | 45.0% | |
| CGAAAAAGGTTACTCAGTGG+AGG | + | chr4_4:50524770-50524789 | None:intergenic | 45.0% | |
| CACCGAAAAAGGTTACTCAG+TGG | + | chr4_4:50524773-50524792 | None:intergenic | 45.0% | |
| TCGGTGTGATGAAGAAGAAG+AGG | - | chr4_4:50524787-50524806 | Msa0686200:intron | 45.0% | |
| CGGTGTGATGAAGAAGAAGA+GGG | - | chr4_4:50524788-50524807 | Msa0686200:intron | 45.0% | |
| TCGTAGGAAGGTTACTGAAG+AGG | - | chr4_4:50524835-50524854 | Msa0686200:intron | 45.0% | |
| !! | CTCAAGTTGTGCCACTTATC+AGG | - | chr4_4:50525032-50525051 | Msa0686200:intron | 45.0% |
| !! | GTGCCACTTATCAGGTATCA+TGG | - | chr4_4:50525040-50525059 | Msa0686200:intron | 45.0% |
| CGCCATTGACACATTGACAT+CGG | - | chr4_4:50525136-50525155 | Msa0686200:three_prime_UTR | 45.0% | |
| TGTTCGACACTACACACATG+TGG | + | chr4_4:50525196-50525215 | None:intergenic | 45.0% | |
| ! | ATGTGTGTAGTGTCGAACAC+CGG | - | chr4_4:50525197-50525216 | Msa0686200:three_prime_UTR | 45.0% |
| CTATAAGGAACCGTGTTGAG+TGG | - | chr4_4:50525851-50525870 | Msa0686200:CDS | 45.0% | |
| GGGGATGCAATGTTAAAGAG+TGG | - | chr4_4:50525907-50525926 | Msa0686200:CDS | 45.0% | |
| ! | AATGTTTTGCTGCGGAGTGA+CGG | - | chr4_4:50525934-50525953 | Msa0686200:CDS | 45.0% |
| TAGAGTTTACTGGAGTCAGG+AGG | - | chr4_4:50525983-50526002 | Msa0686200:CDS | 45.0% | |
| AGAGTTTACTGGAGTCAGGA+GGG | - | chr4_4:50525984-50526003 | Msa0686200:CDS | 45.0% | |
| !! | GGATGGGTTATGTTGTGAGT+CGG | - | chr4_4:50526010-50526029 | Msa0686200:CDS | 45.0% |
| GATTCGTGTGCAGTTCTATC+TGG | - | chr4_4:50526071-50526090 | Msa0686200:intron | 45.0% | |
| GGATATGGGTTTAGATGCGA+AGG | - | chr4_4:50526092-50526111 | Msa0686200:intron | 45.0% | |
| GTATAGTGACCGAGAGCTTT+AGG | + | chr4_4:50526144-50526163 | None:intergenic | 45.0% | |
| AGCTCTCGGTCACTATACTT+TGG | - | chr4_4:50526146-50526165 | Msa0686200:intron | 45.0% | |
| GGGCTTGAAAGTAAGGATGT+TGG | - | chr4_4:50526334-50526353 | Msa0686200:CDS | 45.0% | |
| TGCATTTCGGCCACAATTGA+TGG | - | chr4_4:50526366-50526385 | Msa0686200:intron | 45.0% | |
| CCATTGTTCTTCAATGCTGC+AGG | + | chr4_4:50526392-50526411 | None:intergenic | 45.0% | |
| ! | CCTGCAGCATTGAAGAACAA+TGG | - | chr4_4:50526389-50526408 | Msa0686200:intron | 45.0% |
| AGGCTGTAAGTGAGTAGAGT+GGG | + | chr4_4:50526750-50526769 | None:intergenic | 45.0% | |
| AAGGCTGTAAGTGAGTAGAG+TGG | + | chr4_4:50526751-50526770 | None:intergenic | 45.0% | |
| GGTCCAAGAGCTATAACCTT+TGG | + | chr4_4:50527000-50527019 | None:intergenic | 45.0% | |
| ACGATGTCATTGAGTTTCCG+AGG | - | chr4_4:50527205-50527224 | Msa0686200:CDS | 45.0% | |
| !! | GTTTTTCAGCTATTCCCTCG+AGG | - | chr4_4:50527344-50527363 | Msa0686200:intron | 45.0% |
| TGGAATAATTCGACCCTCGA+GGG | + | chr4_4:50527361-50527380 | None:intergenic | 45.0% | |
| TTGGAATAATTCGACCCTCG+AGG | + | chr4_4:50527362-50527381 | None:intergenic | 45.0% | |
| TTACGTCTGGGCTGTAGATT+GGG | + | chr4_4:50527535-50527554 | None:intergenic | 45.0% | |
| TTTACGTCTGGGCTGTAGAT+TGG | + | chr4_4:50527536-50527555 | None:intergenic | 45.0% | |
| ! | AACAAAAACCGATGGCTCTG+TGG | - | chr4_4:50527556-50527575 | Msa0686200:intron | 45.0% |
| ! | TCTGTTTTCCACAGAGCCAT+CGG | + | chr4_4:50527567-50527586 | None:intergenic | 45.0% |
| TTCATTGGCACACTTCACAG+TGG | + | chr4_4:50527854-50527873 | None:intergenic | 45.0% | |
| ! | AGACAGTGCAAGAAGTACAC+GGG | + | chr4_4:50527896-50527915 | None:intergenic | 45.0% |
| TAAGCACTTGTGGGAGCTTA+TGG | - | chr4_4:50528023-50528042 | Msa0686200:CDS | 45.0% | |
| TTGTGGGAGCTTATGGAAAG+TGG | - | chr4_4:50528030-50528049 | Msa0686200:CDS | 45.0% | |
| TTACCTTGAGCCGTCTATCA+CGG | - | chr4_4:50528357-50528376 | Msa0686200:CDS | 45.0% | |
| TGATGCTTAGCCGTGATAGA+CGG | + | chr4_4:50528370-50528389 | None:intergenic | 45.0% | |
| ATATCTTCTTGCGCTTGTGG+GGG | + | chr4_4:50528563-50528582 | None:intergenic | 45.0% | |
| GATATCTTCTTGCGCTTGTG+GGG | + | chr4_4:50528564-50528583 | None:intergenic | 45.0% | |
| !!! | GTTTTGGGTTTTTGAGGGTG+TGG | + | chr4_4:50524472-50524491 | None:intergenic | 45.0% |
| !! | TGACGATGGTGGTGAGTTTT+GGG | + | chr4_4:50524487-50524506 | None:intergenic | 45.0% |
| !! | TTGACGATGGTGGTGAGTTT+TGG | + | chr4_4:50524488-50524507 | None:intergenic | 45.0% |
| !!! | GGTGTTGTTCGTTTGGGTTT+TGG | + | chr4_4:50524514-50524533 | None:intergenic | 45.0% |
| ! | TGTGTCTTCTGGGAATTGGT+TGG | + | chr4_4:50524541-50524560 | None:intergenic | 45.0% |
| ! | GCATTGTGTCTTCTGGGAAT+TGG | + | chr4_4:50524545-50524564 | None:intergenic | 45.0% |
| ! | TGTTGGGTCTTGTAGTGAAG+TGG | + | chr4_4:50524630-50524649 | None:intergenic | 45.0% |
| AAAAGAACCCCACAGTTTCC+AGG | - | chr4_4:50524695-50524714 | Msa0686200:three_prime_UTR | 45.0% | |
| ATCTCCAAGTGATCCTGATG+TGG | - | chr4_4:50524733-50524752 | Msa0686200:intron | 45.0% | |
| TCTCCAAGTGATCCTGATGT+GGG | - | chr4_4:50524734-50524753 | Msa0686200:intron | 45.0% | |
| CGAAAAAGGTTACTCAGTGG+AGG | + | chr4_4:50524770-50524789 | None:intergenic | 45.0% | |
| CACCGAAAAAGGTTACTCAG+TGG | + | chr4_4:50524773-50524792 | None:intergenic | 45.0% | |
| TCGGTGTGATGAAGAAGAAG+AGG | - | chr4_4:50524787-50524806 | Msa0686200:intron | 45.0% | |
| CGGTGTGATGAAGAAGAAGA+GGG | - | chr4_4:50524788-50524807 | Msa0686200:intron | 45.0% | |
| TCGTAGGAAGGTTACTGAAG+AGG | - | chr4_4:50524835-50524854 | Msa0686200:intron | 45.0% | |
| !! | CTCAAGTTGTGCCACTTATC+AGG | - | chr4_4:50525032-50525051 | Msa0686200:intron | 45.0% |
| !! | GTGCCACTTATCAGGTATCA+TGG | - | chr4_4:50525040-50525059 | Msa0686200:intron | 45.0% |
| CGCCATTGACACATTGACAT+CGG | - | chr4_4:50525136-50525155 | Msa0686200:three_prime_UTR | 45.0% | |
| TGTTCGACACTACACACATG+TGG | + | chr4_4:50525196-50525215 | None:intergenic | 45.0% | |
| ! | ATGTGTGTAGTGTCGAACAC+CGG | - | chr4_4:50525197-50525216 | Msa0686200:three_prime_UTR | 45.0% |
| CTATAAGGAACCGTGTTGAG+TGG | - | chr4_4:50525851-50525870 | Msa0686200:CDS | 45.0% | |
| GGGGATGCAATGTTAAAGAG+TGG | - | chr4_4:50525907-50525926 | Msa0686200:CDS | 45.0% | |
| ! | AATGTTTTGCTGCGGAGTGA+CGG | - | chr4_4:50525934-50525953 | Msa0686200:CDS | 45.0% |
| TAGAGTTTACTGGAGTCAGG+AGG | - | chr4_4:50525983-50526002 | Msa0686200:CDS | 45.0% | |
| AGAGTTTACTGGAGTCAGGA+GGG | - | chr4_4:50525984-50526003 | Msa0686200:CDS | 45.0% | |
| !! | GGATGGGTTATGTTGTGAGT+CGG | - | chr4_4:50526010-50526029 | Msa0686200:CDS | 45.0% |
| GATTCGTGTGCAGTTCTATC+TGG | - | chr4_4:50526071-50526090 | Msa0686200:intron | 45.0% | |
| GGATATGGGTTTAGATGCGA+AGG | - | chr4_4:50526092-50526111 | Msa0686200:intron | 45.0% | |
| GTATAGTGACCGAGAGCTTT+AGG | + | chr4_4:50526144-50526163 | None:intergenic | 45.0% | |
| AGCTCTCGGTCACTATACTT+TGG | - | chr4_4:50526146-50526165 | Msa0686200:intron | 45.0% | |
| GGGCTTGAAAGTAAGGATGT+TGG | - | chr4_4:50526334-50526353 | Msa0686200:CDS | 45.0% | |
| TGCATTTCGGCCACAATTGA+TGG | - | chr4_4:50526366-50526385 | Msa0686200:intron | 45.0% | |
| CCATTGTTCTTCAATGCTGC+AGG | + | chr4_4:50526392-50526411 | None:intergenic | 45.0% | |
| ! | CCTGCAGCATTGAAGAACAA+TGG | - | chr4_4:50526389-50526408 | Msa0686200:intron | 45.0% |
| AGGCTGTAAGTGAGTAGAGT+GGG | + | chr4_4:50526750-50526769 | None:intergenic | 45.0% | |
| AAGGCTGTAAGTGAGTAGAG+TGG | + | chr4_4:50526751-50526770 | None:intergenic | 45.0% | |
| GGTCCAAGAGCTATAACCTT+TGG | + | chr4_4:50527000-50527019 | None:intergenic | 45.0% | |
| ACGATGTCATTGAGTTTCCG+AGG | - | chr4_4:50527205-50527224 | Msa0686200:CDS | 45.0% | |
| !! | GTTTTTCAGCTATTCCCTCG+AGG | - | chr4_4:50527344-50527363 | Msa0686200:intron | 45.0% |
| TGGAATAATTCGACCCTCGA+GGG | + | chr4_4:50527361-50527380 | None:intergenic | 45.0% | |
| TTGGAATAATTCGACCCTCG+AGG | + | chr4_4:50527362-50527381 | None:intergenic | 45.0% | |
| TTACGTCTGGGCTGTAGATT+GGG | + | chr4_4:50527535-50527554 | None:intergenic | 45.0% | |
| TTTACGTCTGGGCTGTAGAT+TGG | + | chr4_4:50527536-50527555 | None:intergenic | 45.0% | |
| ! | AACAAAAACCGATGGCTCTG+TGG | - | chr4_4:50527556-50527575 | Msa0686200:intron | 45.0% |
| ! | TCTGTTTTCCACAGAGCCAT+CGG | + | chr4_4:50527567-50527586 | None:intergenic | 45.0% |
| TTCATTGGCACACTTCACAG+TGG | + | chr4_4:50527854-50527873 | None:intergenic | 45.0% | |
| ! | AGACAGTGCAAGAAGTACAC+GGG | + | chr4_4:50527896-50527915 | None:intergenic | 45.0% |
| TAAGCACTTGTGGGAGCTTA+TGG | - | chr4_4:50528023-50528042 | Msa0686200:CDS | 45.0% | |
| TTGTGGGAGCTTATGGAAAG+TGG | - | chr4_4:50528030-50528049 | Msa0686200:CDS | 45.0% | |
| TTACCTTGAGCCGTCTATCA+CGG | - | chr4_4:50528357-50528376 | Msa0686200:CDS | 45.0% | |
| TGATGCTTAGCCGTGATAGA+CGG | + | chr4_4:50528370-50528389 | None:intergenic | 45.0% | |
| ATATCTTCTTGCGCTTGTGG+GGG | + | chr4_4:50528563-50528582 | None:intergenic | 45.0% | |
| GATATCTTCTTGCGCTTGTG+GGG | + | chr4_4:50528564-50528583 | None:intergenic | 45.0% | |
| !! | GTTTTGGCAGTTGACGATGG+TGG | + | chr4_4:50524498-50524517 | None:intergenic | 50.0% |
| !! | TGGGTTTTGGCAGTTGACGA+TGG | + | chr4_4:50524501-50524520 | None:intergenic | 50.0% |
| GAACCCACATCAGGATCACT+TGG | + | chr4_4:50524740-50524759 | None:intergenic | 50.0% | |
| GGAAGAGAAGAACCCACATC+AGG | + | chr4_4:50524749-50524768 | None:intergenic | 50.0% | |
| TTCAGCACATATGTGGCCGT+TGG | - | chr4_4:50525387-50525406 | Msa0686200:three_prime_UTR | 50.0% | |
| CCGACTTCAACCACTCAACA+CGG | + | chr4_4:50525864-50525883 | None:intergenic | 50.0% | |
| CCGTGTTGAGTGGTTGAAGT+CGG | - | chr4_4:50525861-50525880 | Msa0686200:CDS | 50.0% | |
| ! | ATGTTTTGCTGCGGAGTGAC+GGG | - | chr4_4:50525935-50525954 | Msa0686200:CDS | 50.0% |
| TTACTGGAGTCAGGAGGGAA+TGG | - | chr4_4:50525989-50526008 | Msa0686200:CDS | 50.0% | |
| !! | TGCGAAGGATTTTGGCACCA+TGG | - | chr4_4:50526107-50526126 | Msa0686200:intron | 50.0% |
| ATGCTGCAGGCCATCAATTG+TGG | + | chr4_4:50526379-50526398 | None:intergenic | 50.0% | |
| CATTCTCCTCATCCCATCTC+GGG | + | chr4_4:50526452-50526471 | None:intergenic | 50.0% | |
| GCATTCTCCTCATCCCATCT+CGG | + | chr4_4:50526453-50526472 | None:intergenic | 50.0% | |
| TTCTTCAGTGACTCCAGCCT+TGG | + | chr4_4:50526971-50526990 | None:intergenic | 50.0% | |
| ATCGTGCAAAGTTCGGACCA+TGG | + | chr4_4:50527190-50527209 | None:intergenic | 50.0% | |
| ! | TCCAAGACACAAGGTTCTGG+TGG | - | chr4_4:50527377-50527396 | Msa0686200:intron | 50.0% |
| TCCACCAGAACCTTGTGTCT+TGG | + | chr4_4:50527381-50527400 | None:intergenic | 50.0% | |
| TACGTCTGGGCTGTAGATTG+GGG | + | chr4_4:50527534-50527553 | None:intergenic | 50.0% | |
| ACAAGTGACAAGTGACCCAG+CGG | + | chr4_4:50527794-50527813 | None:intergenic | 50.0% | |
| !! | GTTTTGGCAGTTGACGATGG+TGG | + | chr4_4:50524498-50524517 | None:intergenic | 50.0% |
| !! | TGGGTTTTGGCAGTTGACGA+TGG | + | chr4_4:50524501-50524520 | None:intergenic | 50.0% |
| GAACCCACATCAGGATCACT+TGG | + | chr4_4:50524740-50524759 | None:intergenic | 50.0% | |
| GGAAGAGAAGAACCCACATC+AGG | + | chr4_4:50524749-50524768 | None:intergenic | 50.0% | |
| TTCAGCACATATGTGGCCGT+TGG | - | chr4_4:50525387-50525406 | Msa0686200:three_prime_UTR | 50.0% | |
| CCGACTTCAACCACTCAACA+CGG | + | chr4_4:50525864-50525883 | None:intergenic | 50.0% | |
| CCGTGTTGAGTGGTTGAAGT+CGG | - | chr4_4:50525861-50525880 | Msa0686200:CDS | 50.0% | |
| ! | ATGTTTTGCTGCGGAGTGAC+GGG | - | chr4_4:50525935-50525954 | Msa0686200:CDS | 50.0% |
| TTACTGGAGTCAGGAGGGAA+TGG | - | chr4_4:50525989-50526008 | Msa0686200:CDS | 50.0% | |
| !! | TGCGAAGGATTTTGGCACCA+TGG | - | chr4_4:50526107-50526126 | Msa0686200:intron | 50.0% |
| ATGCTGCAGGCCATCAATTG+TGG | + | chr4_4:50526379-50526398 | None:intergenic | 50.0% | |
| CATTCTCCTCATCCCATCTC+GGG | + | chr4_4:50526452-50526471 | None:intergenic | 50.0% | |
| GCATTCTCCTCATCCCATCT+CGG | + | chr4_4:50526453-50526472 | None:intergenic | 50.0% | |
| TTCTTCAGTGACTCCAGCCT+TGG | + | chr4_4:50526971-50526990 | None:intergenic | 50.0% | |
| ATCGTGCAAAGTTCGGACCA+TGG | + | chr4_4:50527190-50527209 | None:intergenic | 50.0% | |
| ! | TCCAAGACACAAGGTTCTGG+TGG | - | chr4_4:50527377-50527396 | Msa0686200:intron | 50.0% |
| TCCACCAGAACCTTGTGTCT+TGG | + | chr4_4:50527381-50527400 | None:intergenic | 50.0% | |
| TACGTCTGGGCTGTAGATTG+GGG | + | chr4_4:50527534-50527553 | None:intergenic | 50.0% | |
| ACAAGTGACAAGTGACCCAG+CGG | + | chr4_4:50527794-50527813 | None:intergenic | 50.0% | |
| ! | TGTTTTGCTGCGGAGTGACG+GGG | - | chr4_4:50525936-50525955 | Msa0686200:CDS | 55.0% |
| TGGAGTCAGGAGGGAATGGA+TGG | - | chr4_4:50525993-50526012 | Msa0686200:CDS | 55.0% | |
| GGAGTCAGGAGGGAATGGAT+GGG | - | chr4_4:50525994-50526013 | Msa0686200:CDS | 55.0% | |
| GGATTACCCGAGATGGGATG+AGG | - | chr4_4:50526443-50526462 | Msa0686200:intron | 55.0% | |
| AGCTCTTGGACCTGAGCTCT+TGG | - | chr4_4:50527008-50527027 | Msa0686200:CDS | 55.0% | |
| GCTCTTGGACCTGAGCTCTT+GGG | - | chr4_4:50527009-50527028 | Msa0686200:CDS | 55.0% | |
| ATGCTGCATCCCAAGAGCTC+AGG | + | chr4_4:50527021-50527040 | None:intergenic | 55.0% | |
| TGTCTCTCGGCGTACGTCTT+CGG | - | chr4_4:50527076-50527095 | Msa0686200:CDS | 55.0% | |
| TAGCCGTGATAGACGGCTCA+AGG | + | chr4_4:50528363-50528382 | None:intergenic | 55.0% | |
| ! | TGTTTTGCTGCGGAGTGACG+GGG | - | chr4_4:50525936-50525955 | Msa0686200:CDS | 55.0% |
| TGGAGTCAGGAGGGAATGGA+TGG | - | chr4_4:50525993-50526012 | Msa0686200:CDS | 55.0% | |
| GGAGTCAGGAGGGAATGGAT+GGG | - | chr4_4:50525994-50526013 | Msa0686200:CDS | 55.0% | |
| GGATTACCCGAGATGGGATG+AGG | - | chr4_4:50526443-50526462 | Msa0686200:intron | 55.0% | |
| AGCTCTTGGACCTGAGCTCT+TGG | - | chr4_4:50527008-50527027 | Msa0686200:CDS | 55.0% | |
| GCTCTTGGACCTGAGCTCTT+GGG | - | chr4_4:50527009-50527028 | Msa0686200:CDS | 55.0% | |
| ATGCTGCATCCCAAGAGCTC+AGG | + | chr4_4:50527021-50527040 | None:intergenic | 55.0% | |
| TGTCTCTCGGCGTACGTCTT+CGG | - | chr4_4:50527076-50527095 | Msa0686200:CDS | 55.0% | |
| TAGCCGTGATAGACGGCTCA+AGG | + | chr4_4:50528363-50528382 | None:intergenic | 55.0% | |
| GGCGTACGTCTTCGGCAACT+GGG | - | chr4_4:50527084-50527103 | Msa0686200:CDS | 60.0% | |
| GGCGTACGTCTTCGGCAACT+GGG | - | chr4_4:50527084-50527103 | Msa0686200:CDS | 60.0% | |
| CGGCGTACGTCTTCGGCAAC+TGG | - | chr4_4:50527083-50527102 | Msa0686200:CDS | 65.0% | |
| CGGCGTACGTCTTCGGCAAC+TGG | - | chr4_4:50527083-50527102 | Msa0686200:CDS | 65.0% | |
| ! | GCTGCGGAGTGACGGGGAGT+TGG | - | chr4_4:50525942-50525961 | Msa0686200:CDS | 70.0% |
| ! | GCTGCGGAGTGACGGGGAGT+TGG | - | chr4_4:50525942-50525961 | Msa0686200:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 50524315 | 50528722 | 50524315 | ID=Msa0686200;Name=Msa0686200 |
| chr4_4 | mRNA | 50524315 | 50528722 | 50524315 | ID=Msa0686200-mRNA-1;Parent=Msa0686200;Name=Msa0686200-mRNA-1;_AED=0.08;_eAED=0.08;_QI=4|1|1|1|0.62|0.44|9|713|617 |
| chr4_4 | exon | 50524315 | 50524468 | 50524315 | ID=Msa0686200-mRNA-1:exon:12992;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50524566 | 50524750 | 50524566 | ID=Msa0686200-mRNA-1:exon:12991;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50525109 | 50525693 | 50525109 | ID=Msa0686200-mRNA-1:exon:12990;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50525811 | 50526085 | 50525811 | ID=Msa0686200-mRNA-1:exon:12989;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50526246 | 50526353 | 50526246 | ID=Msa0686200-mRNA-1:exon:12988;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50526509 | 50526724 | 50526509 | ID=Msa0686200-mRNA-1:exon:12987;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50526852 | 50527260 | 50526852 | ID=Msa0686200-mRNA-1:exon:12986;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50527984 | 50528581 | 50527984 | ID=Msa0686200-mRNA-1:exon:12985;Parent=Msa0686200-mRNA-1 |
| chr4_4 | exon | 50528682 | 50528722 | 50528682 | ID=Msa0686200-mRNA-1:exon:12984;Parent=Msa0686200-mRNA-1 |
| chr4_4 | five_prime_UTR | 50528719 | 50528722 | 50528719 | ID=Msa0686200-mRNA-1:five_prime_utr;Parent=Msa0686200-mRNA-1 |
| chr4_4 | CDS | 50528682 | 50528718 | 50528682 | ID=Msa0686200-mRNA-1:cds;Parent=Msa0686200-mRNA-1 |
| chr4_4 | CDS | 50527984 | 50528581 | 50527984 | ID=Msa0686200-mRNA-1:cds;Parent=Msa0686200-mRNA-1 |
| chr4_4 | CDS | 50526852 | 50527260 | 50526852 | ID=Msa0686200-mRNA-1:cds;Parent=Msa0686200-mRNA-1 |
| chr4_4 | CDS | 50526509 | 50526724 | 50526509 | ID=Msa0686200-mRNA-1:cds;Parent=Msa0686200-mRNA-1 |
| chr4_4 | CDS | 50526246 | 50526353 | 50526246 | ID=Msa0686200-mRNA-1:cds;Parent=Msa0686200-mRNA-1 |
| chr4_4 | CDS | 50525811 | 50526085 | 50525811 | ID=Msa0686200-mRNA-1:cds;Parent=Msa0686200-mRNA-1 |
| chr4_4 | CDS | 50525483 | 50525693 | 50525483 | ID=Msa0686200-mRNA-1:cds;Parent=Msa0686200-mRNA-1 |
| chr4_4 | three_prime_UTR | 50525109 | 50525482 | 50525109 | ID=Msa0686200-mRNA-1:three_prime_utr;Parent=Msa0686200-mRNA-1 |
| chr4_4 | three_prime_UTR | 50524566 | 50524750 | 50524566 | ID=Msa0686200-mRNA-1:three_prime_utr;Parent=Msa0686200-mRNA-1 |
| chr4_4 | three_prime_UTR | 50524315 | 50524468 | 50524315 | ID=Msa0686200-mRNA-1:three_prime_utr;Parent=Msa0686200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
