AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1046610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046610 MtrunA17_Chr7g0214551 93.599 578 28 2 1 578 1 569 0.0 1102
Msa1046610 MtrunA17_Chr7g0246701 51.859 538 245 5 39 574 94 619 0.0 609
Msa1046610 MtrunA17_Chr1g0203741 50.089 559 254 5 17 557 46 597 0.0 606
Msa1046610 MtrunA17_Chr6g0472571 53.922 510 223 4 49 557 108 606 0.0 603
Msa1046610 MtrunA17_Chr8g0388881 49.815 542 260 4 33 574 85 614 0.0 597
Msa1046610 MtrunA17_Chr8g0350391 49.543 547 262 6 31 574 89 624 0.0 593
Msa1046610 MtrunA17_Chr4g0055031 50.640 547 248 7 30 575 73 598 0.0 588
Msa1046610 MtrunA17_Chr8g0361791 51.887 530 235 6 46 574 84 594 0.0 578
Msa1046610 MtrunA17_Chr5g0416991 49.720 535 248 6 41 574 79 593 0.0 560
Msa1046610 MtrunA17_Chr3g0092501 49.425 522 241 6 45 566 84 582 0.0 535
Msa1046610 MtrunA17_Chr8g0369481 46.094 512 256 8 46 553 70 565 4.80e-160 470
Msa1046610 MtrunA17_Chr5g0409411 45.577 520 269 7 34 552 60 566 1.91e-155 458
Msa1046610 MtrunA17_Chr7g0246681 42.804 542 270 12 46 578 75 585 8.63e-150 443
Msa1046610 MtrunA17_Chr8g0350351 42.639 523 263 11 43 556 85 579 2.05e-148 440
Msa1046610 MtrunA17_Chr3g0112341 41.989 543 285 13 32 566 137 657 1.77e-142 427
Msa1046610 MtrunA17_Chr1g0159741 43.536 526 263 13 54 571 150 649 2.73e-138 416
Msa1046610 MtrunA17_Chr1g0183721 38.422 583 324 13 8 576 20 581 1.69e-137 412
Msa1046610 MtrunA17_Chr3g0113981 42.998 507 252 14 54 552 174 651 7.93e-135 408
Msa1046610 MtrunA17_Chr1g0187601 42.373 531 273 13 46 566 91 598 3.49e-134 404
Msa1046610 MtrunA17_Chr1g0167381 42.004 519 268 13 46 553 92 588 9.47e-132 398
Msa1046610 MtrunA17_Chr3g0130381 40.842 546 288 12 22 553 232 756 9.42e-131 401
Msa1046610 MtrunA17_Chr5g0435751 39.292 537 278 11 36 566 115 609 1.89e-129 392
Msa1046610 MtrunA17_Chr5g0437501 40.494 526 266 15 46 552 91 588 1.26e-128 390
Msa1046610 MtrunA17_Chr3g0125511 41.154 520 265 15 50 553 228 722 5.10e-126 387
Msa1046610 MtrunA17_Chr8g0384431 39.964 548 292 14 22 553 260 786 6.81e-125 386
Msa1046610 MtrunA17_Chr8g0372471 40.351 513 271 12 51 553 383 870 1.99e-120 377
Msa1046610 MtrunA17_Chr1g0171781 37.982 545 296 12 23 553 63 579 1.04e-116 359
Msa1046610 MtrunA17_Chr1g0155141 35.907 518 285 17 46 553 199 679 6.92e-93 300
Msa1046610 MtrunA17_Chr3g0115931 33.813 556 311 16 41 565 149 678 3.49e-92 298
Msa1046610 MtrunA17_Chr5g0426281 32.337 569 300 15 37 565 137 660 1.21e-88 288
Msa1046610 MtrunA17_Chr5g0404771 46.903 226 116 2 51 274 325 548 1.01e-68 233
Msa1046610 MtrunA17_Chr4g0043121 31.818 286 182 4 42 320 82 361 3.06e-49 176
Msa1046610 MtrunA17_Chr5g0404761 35.714 266 150 9 297 553 1 254 1.11e-42 154
Msa1046610 MtrunA17_Chr4g0043131 50.394 127 59 3 434 557 40 165 1.82e-35 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1046610 AT2G43200.2 56.554 534 217 6 45 577 90 609 0.0 647
Msa1046610 AT2G43200.1 56.554 534 217 6 45 577 90 609 0.0 647
Msa1046610 AT4G10440.1 50.826 545 253 5 33 574 78 610 0.0 602
Msa1046610 AT1G33170.1 50.838 537 252 4 39 574 103 628 0.0 601
Msa1046610 AT2G45750.1 51.481 540 245 6 34 568 75 602 0.0 596
Msa1046610 AT1G26850.2 52.052 536 243 5 40 574 80 602 0.0 594
Msa1046610 AT1G26850.1 52.052 536 243 5 40 574 80 602 0.0 594
Msa1046610 AT4G00750.1 50.943 530 246 5 49 575 99 617 0.0 587
Msa1046610 AT4G18030.1 48.411 535 256 7 42 574 81 597 0.0 536
Msa1046610 AT4G19120.1 46.911 518 253 10 41 552 65 566 2.54e-164 481
Msa1046610 AT4G19120.2 46.911 518 253 10 41 552 65 566 2.54e-164 481
Msa1046610 AT1G26850.3 50.577 433 205 3 40 472 80 503 2.68e-162 473
Msa1046610 AT1G31850.1 45.472 519 267 8 37 552 67 572 9.75e-162 475
Msa1046610 AT1G31850.2 45.472 519 267 8 37 552 67 572 9.75e-162 475
Msa1046610 AT1G31850.4 45.472 519 267 8 37 552 67 572 9.75e-162 475
Msa1046610 AT1G31850.3 45.472 519 267 8 37 552 67 572 9.75e-162 475
Msa1046610 AT4G00740.1 42.222 540 276 11 46 578 81 591 6.02e-150 444
Msa1046610 AT4G00740.2 42.222 540 276 11 46 578 81 591 6.02e-150 444
Msa1046610 AT5G06050.1 43.494 538 270 12 39 566 140 653 2.72e-146 438
Msa1046610 AT2G39750.1 41.959 541 278 12 36 568 167 679 3.56e-143 430
Msa1046610 AT1G77260.1 40.901 555 287 14 31 575 127 650 2.38e-140 422
Msa1046610 AT4G19120.3 46.785 451 218 10 41 485 65 499 3.65e-138 411
Msa1046610 AT1G04430.1 43.071 534 268 13 46 568 84 592 3.42e-134 405
Msa1046610 AT1G04430.3 43.071 534 268 13 46 568 84 592 3.42e-134 405
Msa1046610 AT1G04430.2 43.071 534 268 13 46 568 84 592 3.42e-134 405
Msa1046610 AT3G23300.2 40.926 540 286 14 46 574 79 596 5.51e-132 399
Msa1046610 AT3G23300.1 40.926 540 286 14 46 574 79 596 5.51e-132 399
Msa1046610 AT4G14360.1 42.582 519 265 14 46 553 76 572 5.68e-132 399
Msa1046610 AT4G14360.2 42.582 519 265 14 46 553 76 572 5.68e-132 399
Msa1046610 AT5G64030.1 42.278 518 266 13 48 553 300 796 2.02e-131 404
Msa1046610 AT2G40280.1 40.713 533 270 14 36 556 70 568 3.40e-131 396
Msa1046610 AT3G56080.1 40.945 508 268 12 55 556 114 595 7.49e-131 396
Msa1046610 AT5G14430.1 41.860 516 269 11 48 553 82 576 2.36e-127 387
Msa1046610 AT1G29470.1 39.633 545 289 15 23 552 217 736 8.97e-126 388
Msa1046610 AT1G29470.2 39.633 545 289 15 23 552 217 736 8.97e-126 388
Msa1046610 AT5G14430.2 41.279 516 272 11 48 553 82 576 2.76e-125 382
Msa1046610 AT2G34300.2 39.671 547 286 15 35 563 227 747 3.63e-125 386
Msa1046610 AT2G34300.3 39.671 547 286 15 35 563 227 747 3.63e-125 386
Msa1046610 AT2G34300.1 39.671 547 286 15 35 563 227 747 3.63e-125 386
Msa1046610 AT5G04060.1 39.187 541 286 13 26 553 63 573 6.77e-125 380
Msa1046610 AT3G10200.1 38.745 542 288 13 26 553 52 563 1.03e-121 372
Msa1046610 AT3G51070.1 39.922 516 276 11 50 553 376 869 5.74e-119 374
Msa1046610 AT3G56080.2 42.140 458 233 12 55 506 114 545 3.50e-118 361
Msa1046610 AT3G10200.2 38.878 517 272 13 26 528 52 538 1.89e-113 350
Msa1046610 AT3G51070.2 40.938 469 243 11 50 506 376 822 1.31e-106 339
Msa1046610 AT1G19430.1 34.535 527 297 16 46 561 221 710 1.65e-89 291
Msa1046610 AT1G19430.3 34.535 527 297 16 46 561 221 710 1.65e-89 291
Msa1046610 AT1G78240.1 32.799 561 314 17 45 574 145 673 2.47e-87 285
Msa1046610 AT1G78240.2 32.799 561 314 17 45 574 145 673 2.47e-87 285
Msa1046610 AT1G13860.4 31.760 551 307 15 45 565 80 591 1.17e-86 281
Msa1046610 AT1G13860.3 31.760 551 307 15 45 565 80 591 1.17e-86 281
Msa1046610 AT1G13860.1 31.760 551 307 15 45 565 80 591 1.17e-86 281
Msa1046610 AT1G13860.5 31.760 551 307 15 45 565 80 591 1.17e-86 281
Msa1046610 AT2G03480.2 30.713 547 305 11 45 565 85 583 3.92e-83 271
Msa1046610 AT2G03480.1 30.713 547 316 12 45 565 85 594 4.68e-81 266
Msa1046610 AT1G13860.2 33.258 445 242 13 148 565 19 435 2.49e-75 247
Msa1046610 AT1G19430.2 30.170 411 241 14 46 446 221 595 4.77e-49 180
Msa1046610 AT2G03480.3 32.155 283 180 4 45 320 85 362 9.40e-46 167

Find 104 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGAACCATAATCATTTC+TGG 0.166933 7_2:-7226226 None:intergenic
GAAGCTTCTTCCTGTGAATT+TGG 0.175630 7_2:+7222338 Msa1046610:CDS
CTTCCTGTGAATTTGGAGTC+TGG 0.252938 7_2:+7222345 Msa1046610:CDS
CCCTTCAAAATCATTTGATA+TGG 0.266363 7_2:+7223304 Msa1046610:CDS
TAGTTAACCCTCCAGTTTAT+AGG 0.271919 7_2:-7224014 None:intergenic
TCATCGATGTCTTTCACTTC+TGG 0.275668 7_2:-7224727 None:intergenic
TATTCCACAAGCTTAGTAAA+AGG 0.284054 7_2:-7222210 None:intergenic
TTCTCACCCAGAAATGATTA+TGG 0.315884 7_2:+7226219 Msa1046610:CDS
CATGCATTGTCCTTACTCTT+AGG 0.317866 7_2:-7222174 None:intergenic
TTCTTGTACCCTATTGGTTT+AGG 0.320016 7_2:-7222138 None:intergenic
AAACCTATAGTGAAGATAAT+AGG 0.330407 7_2:+7224842 Msa1046610:CDS
GGTGAATCATTCAATCTTAT+AGG 0.330952 7_2:-7224778 None:intergenic
TATCCTATTATCTTCACTAT+AGG 0.342075 7_2:-7224845 None:intergenic
CAATGGTGAAATATCCAGTT+TGG 0.345411 7_2:+7224974 Msa1046610:CDS
ATATCCTGTCAATCTCTCTT+AGG 0.350584 7_2:-7223956 None:intergenic
AAAGGCTTCTTGTACCCTAT+TGG 0.351569 7_2:-7222144 None:intergenic
TGTCTTATTCCTAAACCAAT+AGG 0.352703 7_2:+7222129 Msa1046610:CDS
TTCCTGTGAATTTGGAGTCT+GGG 0.359094 7_2:+7222346 Msa1046610:CDS
TATGACTTGATACATGCTTA+TGG 0.378779 7_2:+7225881 Msa1046610:CDS
CTAATAATAACAGTTCCTTC+TGG 0.382335 7_2:-7226100 None:intergenic
ACAACATTCATAACCCAAAC+TGG 0.384154 7_2:-7224988 None:intergenic
TGTTCTTGGGTAAGTTGAAA+AGG 0.390698 7_2:-7225858 None:intergenic
ATTTATGAAAGAGGCCTCAT+AGG 0.392033 7_2:+7225045 Msa1046610:CDS
ATAGTGAAGATAATAGGATA+TGG 0.398371 7_2:+7224848 Msa1046610:CDS
TCAGATGAATTGCAAAACTT+TGG 0.400648 7_2:-7224206 None:intergenic
TTTCTGGACCACCTATAAAC+TGG 0.402233 7_2:+7224003 Msa1046610:CDS
TGGTAAATATAGAAATGTTA+TGG 0.402597 7_2:+7224918 Msa1046610:CDS
TGTATCAAGTCATATGTTCT+TGG 0.405750 7_2:-7225872 None:intergenic
ATGGATATGAATGCTGGCTT+TGG 0.406035 7_2:+7224937 Msa1046610:CDS
TAATTGAAGGTAGCAAGCTT+TGG 0.406799 7_2:+7223146 Msa1046610:intron
GCTCTAGATGCCTTGTCCCT+TGG 0.411319 7_2:+7223333 Msa1046610:CDS
ATTAGAACTGTTCTTGATGT+TGG 0.413977 7_2:+7222372 Msa1046610:CDS
TGTCAATATACATACTGAAT+AGG 0.421085 7_2:-7225904 None:intergenic
CTTGGCATTATTTATGAAAG+AGG 0.422782 7_2:+7225036 Msa1046610:CDS
TGAGAACCATAATCATTTCT+GGG 0.427890 7_2:-7226225 None:intergenic
AGGGAGGACAAATTGCTATA+TGG 0.430166 7_2:+7224129 Msa1046610:CDS
CTTGTCCCTTGGACTGCTAA+TGG 0.434823 7_2:+7223344 Msa1046610:CDS
CCGGCGGTGTTCTTGAGAAA+TGG 0.435372 7_2:+7224755 Msa1046610:CDS
GATATGAATGCTGGCTTTGG+TGG 0.443506 7_2:+7224940 Msa1046610:CDS
ACATAACCCTTTACACCATC+AGG 0.447571 7_2:-7222303 None:intergenic
AAAGCTATGAACTATTGAAC+AGG 0.451357 7_2:+7224671 Msa1046610:intron
AATGGTGAAATATCCAGTTT+GGG 0.456007 7_2:+7224975 Msa1046610:CDS
ATGTCTTTCACTTCTGGAAG+AGG 0.457490 7_2:-7224721 None:intergenic
AATAACAGATAGAATGAGAT+GGG 0.458438 7_2:+7226156 Msa1046610:CDS
ATGCTCAAATCACTCTCATC+TGG 0.459974 7_2:+7224898 Msa1046610:CDS
TTGGAGTATTCAGCACTCAT+AGG 0.463802 7_2:+7223273 Msa1046610:CDS
GTCTTATTCCTAAACCAATA+GGG 0.464159 7_2:+7222130 Msa1046610:CDS
TTGAGAAAAGAGAATGATGA+TGG 0.465341 7_2:+7224808 Msa1046610:CDS
GTATCAAGTCATATGTTCTT+GGG 0.478299 7_2:-7225871 None:intergenic
GTGATGTTTGCACTTGAAAG+AGG 0.484883 7_2:+7223236 Msa1046610:CDS
ACTGTTCTTGATGTTGGATG+TGG 0.485077 7_2:+7222378 Msa1046610:CDS
TATACCTAAGAGAGATTGAC+AGG 0.491017 7_2:+7223952 Msa1046610:CDS
AAAGGAACAGAACAGTTTAG+AGG 0.493506 7_2:+7224070 Msa1046610:CDS
GTTCTTGGGTAAGTTGAAAA+GGG 0.494722 7_2:-7225857 None:intergenic
TGGTGGATTTGCAGCTGCAA+TGG 0.501062 7_2:+7224957 Msa1046610:CDS
AAAAGTCACAGAATTGGATA+AGG 0.502761 7_2:+7222235 Msa1046610:CDS
TTACTCTTAGGCCAAGGAAA+AGG 0.503744 7_2:-7222162 None:intergenic
AGAGGACTTCCTGCTATGCT+TGG 0.504822 7_2:+7223254 Msa1046610:CDS
GTCACAGAATTGGATAAGGT+TGG 0.505287 7_2:+7222239 Msa1046610:CDS
GTTAATCTTTCATTGTTTCG+TGG 0.506844 7_2:-7222105 None:intergenic
TCATAGGAACTTACATGGAT+TGG 0.511002 7_2:+7225061 Msa1046610:CDS
AAGCTTTGGATCAGCTATGA+TGG 0.521435 7_2:+7223160 Msa1046610:CDS
CTGAATACTCCAAGCATAGC+AGG 0.524451 7_2:-7223263 None:intergenic
ACAGATAGAATGAGATGGGA+AGG 0.525765 7_2:+7226160 Msa1046610:CDS
GATAGAATGAGATGGGAAGG+AGG 0.526208 7_2:+7226163 Msa1046610:CDS
TCTTTGTACGACAACATGCT+TGG 0.526690 7_2:+7226283 Msa1046610:three_prime_UTR
AGAGCCAACAGTGTTGGAAA+AGG 0.527030 7_2:+7224052 Msa1046610:CDS
ACTTGCAATGCAAATGTGTT+GGG 0.533222 7_2:+7224094 Msa1046610:CDS
AACTTGCAATGCAAATGTGT+TGG 0.534357 7_2:+7224093 Msa1046610:CDS
AATTCATCTGACTCTGATGC+TGG 0.536773 7_2:+7224218 Msa1046610:CDS
TGAGCATCATGTTCATCACT+TGG 0.541880 7_2:-7223212 None:intergenic
CTCCCAGACTCCAAATTCAC+AGG 0.544163 7_2:-7222348 None:intergenic
AAATAACAGATAGAATGAGA+TGG 0.551015 7_2:+7226155 Msa1046610:CDS
AGTTGAACAAAATTCAAAGT+GGG 0.553005 7_2:-7221995 None:intergenic
CTGTGAATTTGGAGTCTGGG+AGG 0.554896 7_2:+7222349 Msa1046610:CDS
GCAAACAGAGCCAACAGTGT+TGG 0.557287 7_2:+7224046 Msa1046610:CDS
ATATTGTTATTGAGATGCAT+CGG 0.562461 7_2:+7226068 Msa1046610:CDS
AGGCCTCATAGGAACTTACA+TGG 0.568438 7_2:+7225056 Msa1046610:CDS
CTGTTCTTGATGTTGGATGT+GGG 0.573901 7_2:+7222379 Msa1046610:CDS
AATGTTATGGATATGAATGC+TGG 0.574824 7_2:+7224931 Msa1046610:CDS
AAGTTACCATTAGCAGTCCA+AGG 0.575360 7_2:-7223350 None:intergenic
GAAAGTACCCAAAATCCGCC+AGG 0.575494 7_2:-7223984 None:intergenic
TTGTCCTTACTCTTAGGCCA+AGG 0.579345 7_2:-7222168 None:intergenic
CAGAATTGGATAAGGTTGGA+TGG 0.581572 7_2:+7222243 Msa1046610:CDS
CATCGGATTCTTCGTCCAGA+AGG 0.581866 7_2:+7226085 Msa1046610:CDS
CACCACCAGGAAACACAAAA+CGG 0.582482 7_2:-7222269 None:intergenic
AATCCATGTAAGTTCCTATG+AGG 0.584131 7_2:-7225059 None:intergenic
CATTAGCAGTCCAAGGGACA+AGG 0.591170 7_2:-7223343 None:intergenic
CCATTTCTCAAGAACACCGC+CGG 0.608620 7_2:-7224755 None:intergenic
CTGGACCACCTATAAACTGG+AGG 0.610529 7_2:+7224006 Msa1046610:CDS
CATCTGACTCTGATGCTGGA+TGG 0.616421 7_2:+7224222 Msa1046610:CDS
ATTGACAGGATATTGCGTCC+TGG 0.625000 7_2:+7223966 Msa1046610:CDS
AAAGACATCGATGAAATCGC+CGG 0.630243 7_2:+7224736 Msa1046610:CDS
TAGTTGAACAAAATTCAAAG+TGG 0.632000 7_2:-7221996 None:intergenic
TTAACCCTCCAGTTTATAGG+TGG 0.632189 7_2:-7224011 None:intergenic
GGAGGGTTAACTATAAAGCA+TGG 0.632607 7_2:+7224024 Msa1046610:CDS
CTAAGAGTAAGGACAATGCA+TGG 0.638483 7_2:+7222175 Msa1046610:CDS
TGGACCACCTATAAACTGGA+GGG 0.642876 7_2:+7224007 Msa1046610:CDS
GGAAAAGAAGTACCACCACC+AGG 0.648807 7_2:-7222282 None:intergenic
TGTTCTTGATGTTGGATGTG+GGG 0.648977 7_2:+7222380 Msa1046610:CDS
GACAGGATATTGCGTCCTGG+CGG 0.665990 7_2:+7223969 Msa1046610:CDS
AGTTACCATTAGCAGTCCAA+GGG 0.675724 7_2:-7223349 None:intergenic
GATTGAATGATTCACCACCA+AGG 0.701587 7_2:+7224785 Msa1046610:CDS
GACATCGATGAAATCGCCGG+CGG 0.750790 7_2:+7224739 Msa1046610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTAAAAACAATAAATTA+AGG + chr7_2:7225522-7225541 Msa1046610:intron 10.0%
!!! ATGCATTTTATATGATTTAT+TGG - chr7_2:7224161-7224180 None:intergenic 15.0%
!! CATAAATAATAGTAAAATAC+AGG - chr7_2:7224308-7224327 None:intergenic 15.0%
!!! ATATTTGATATAGATTTTGA+AGG - chr7_2:7225325-7225344 None:intergenic 15.0%
!! TTTACTAATATTACCAATAA+TGG + chr7_2:7225957-7225976 Msa1046610:intron 15.0%
!!! TTGCGAAAATAGTTTTTTTT+TGG - chr7_2:7222072-7222091 None:intergenic 20.0%
!! AATATAAAAAGTCACAGAAT+TGG + chr7_2:7222229-7222248 Msa1046610:CDS 20.0%
!! TTAGATAATGCTATTAAAAC+TGG + chr7_2:7222571-7222590 Msa1046610:intron 20.0%
!! AGTTTGAATTTGATATTTGT+TGG + chr7_2:7223082-7223101 Msa1046610:intron 20.0%
!!! TTTTGAATGTGTATAATTGA+AGG + chr7_2:7223133-7223152 Msa1046610:intron 20.0%
!! TTGATTCTTAATTTCTCATA+TGG - chr7_2:7223833-7223852 None:intergenic 20.0%
!! CATATTTAATGTAGAGAAAT+TGG + chr7_2:7223870-7223889 Msa1046610:intron 20.0%
!!! TCAATTTAATTTGTCAAAGA+TGG + chr7_2:7223927-7223946 Msa1046610:intron 20.0%
!! TTTATGATCTGATACATAAA+TGG + chr7_2:7224434-7224453 Msa1046610:intron 20.0%
!! AAAATATGAGTTTATGCTAT+AGG + chr7_2:7224476-7224495 Msa1046610:intron 20.0%
!! GAAATTTGAATATAAGACAT+TGG - chr7_2:7224651-7224670 None:intergenic 20.0%
!! TGGTAAATATAGAAATGTTA+TGG + chr7_2:7224918-7224937 Msa1046610:CDS 20.0%
!!! TTTTTGTTTAACTTCAAACT+TGG + chr7_2:7225273-7225292 Msa1046610:intron 20.0%
!! GATTTAATTAATGCACTATA+AGG - chr7_2:7225415-7225434 None:intergenic 20.0%
!!! ATTGGTAATATTAGTAAACA+TGG - chr7_2:7225955-7225974 None:intergenic 20.0%
! AGTTGAACAAAATTCAAAGT+GGG - chr7_2:7221998-7222017 None:intergenic 25.0%
! TAGTTGAACAAAATTCAAAG+TGG - chr7_2:7221999-7222018 None:intergenic 25.0%
!!! GAAATTTTTTCTGTCTTTTG+GGG - chr7_2:7222050-7222069 None:intergenic 25.0%
!!! GGAAATTTTTTCTGTCTTTT+GGG - chr7_2:7222051-7222070 None:intergenic 25.0%
!!! TGGAAATTTTTTCTGTCTTT+TGG - chr7_2:7222052-7222071 None:intergenic 25.0%
! GTTCAACTAAAACTATACTA+AGG - chr7_2:7222666-7222685 None:intergenic 25.0%
!!! TAGTATAGTTTTAGTTGAAC+CGG + chr7_2:7222666-7222685 Msa1046610:intron 25.0%
!!! TTTGTCATTTTGTTCTACAA+TGG + chr7_2:7222769-7222788 Msa1046610:intron 25.0%
! CTTAATATCACAGCAAAATA+CGG - chr7_2:7222918-7222937 None:intergenic 25.0%
! GAAGCATAAGATATATCATA+TGG - chr7_2:7223048-7223067 None:intergenic 25.0%
! TCAAAACACAGATTCTTTAT+AGG - chr7_2:7223119-7223138 None:intergenic 25.0%
!! CCATATCAAATGATTTTGAA+GGG - chr7_2:7223307-7223326 None:intergenic 25.0%
! AGTGTTATCTAAGTAACAAA+GGG - chr7_2:7223382-7223401 None:intergenic 25.0%
! AAGTGTTATCTAAGTAACAA+AGG - chr7_2:7223383-7223402 None:intergenic 25.0%
! AATCAAACTCTTCTCATATA+AGG - chr7_2:7224410-7224429 None:intergenic 25.0%
! AAACCTATAGTGAAGATAAT+AGG + chr7_2:7224842-7224861 Msa1046610:CDS 25.0%
! TATCCTATTATCTTCACTAT+AGG - chr7_2:7224848-7224867 None:intergenic 25.0%
! ATAGTGAAGATAATAGGATA+TGG + chr7_2:7224848-7224867 Msa1046610:CDS 25.0%
!!! TTGTTGCTTTTTGAATCAAA+CGG - chr7_2:7225015-7225034 None:intergenic 25.0%
!! GAGCAAATAATTTAGCATTT+TGG + chr7_2:7225183-7225202 Msa1046610:intron 25.0%
! TATCAAATATATGTTGCTGT+TGG + chr7_2:7225335-7225354 Msa1046610:intron 25.0%
!!! ACTTTTTGATTGAGAAAAAC+AGG - chr7_2:7225688-7225707 None:intergenic 25.0%
!!! TCCTTTAATTTCTCCTATTT+TGG + chr7_2:7225728-7225747 Msa1046610:intron 25.0%
! TCCAAAATAGGAGAAATTAA+AGG - chr7_2:7225732-7225751 None:intergenic 25.0%
! TGTCAATATACATACTGAAT+AGG - chr7_2:7225907-7225926 None:intergenic 25.0%
!! ATATTGTTATTGAGATGCAT+CGG + chr7_2:7226068-7226087 Msa1046610:CDS 25.0%
! AAATAACAGATAGAATGAGA+TGG + chr7_2:7226155-7226174 Msa1046610:CDS 25.0%
! AATAACAGATAGAATGAGAT+GGG + chr7_2:7226156-7226175 Msa1046610:CDS 25.0%
CACAACAAAAACAGAAAAAG+AGG + chr7_2:7221810-7221829 Msa1046610:five_prime_UTR 30.0%
!! TGGAGAATTTTGTTGATGAA+GGG - chr7_2:7221959-7221978 None:intergenic 30.0%
!! TTGGAGAATTTTGTTGATGA+AGG - chr7_2:7221960-7221979 None:intergenic 30.0%
GTTAATCTTTCATTGTTTCG+TGG - chr7_2:7222108-7222127 None:intergenic 30.0%
! TGTCTTATTCCTAAACCAAT+AGG + chr7_2:7222129-7222148 Msa1046610:CDS 30.0%
! GTCTTATTCCTAAACCAATA+GGG + chr7_2:7222130-7222149 Msa1046610:CDS 30.0%
TATTCCACAAGCTTAGTAAA+AGG - chr7_2:7222213-7222232 None:intergenic 30.0%
AAAAGTCACAGAATTGGATA+AGG + chr7_2:7222235-7222254 Msa1046610:CDS 30.0%
ATTAGAACTGTTCTTGATGT+TGG + chr7_2:7222372-7222391 Msa1046610:CDS 30.0%
!! ATAGTTCTAAATTGTGGTCA+TGG + chr7_2:7222516-7222535 Msa1046610:intron 30.0%
AAACTATACTAAGGTACAAC+CGG - chr7_2:7222657-7222676 None:intergenic 30.0%
!!! AGTATAGTTTTAGTTGAACC+GGG + chr7_2:7222667-7222686 Msa1046610:intron 30.0%
! ACTTTTGATCATGGTTCAAT+TGG - chr7_2:7222800-7222819 None:intergenic 30.0%
! CCATGATCAAAAGTTTTTAC+CGG + chr7_2:7222806-7222825 Msa1046610:intron 30.0%
AAAACTAGACAAAATCGATC+CGG - chr7_2:7222828-7222847 None:intergenic 30.0%
TGCTGTGATATTAAGATTCA+AGG + chr7_2:7222923-7222942 Msa1046610:intron 30.0%
CCCTTCAAAATCATTTGATA+TGG + chr7_2:7223304-7223323 Msa1046610:CDS 30.0%
! GCCATATCAAATGATTTTGA+AGG - chr7_2:7223308-7223327 None:intergenic 30.0%
TCAGATGAATTGCAAAACTT+TGG - chr7_2:7224209-7224228 None:intergenic 30.0%
AAAGCTATGAACTATTGAAC+AGG + chr7_2:7224671-7224690 Msa1046610:intron 30.0%
GGTGAATCATTCAATCTTAT+AGG - chr7_2:7224781-7224800 None:intergenic 30.0%
TTGAGAAAAGAGAATGATGA+TGG + chr7_2:7224808-7224827 Msa1046610:CDS 30.0%
AATGTTATGGATATGAATGC+TGG + chr7_2:7224931-7224950 Msa1046610:CDS 30.0%
AATGGTGAAATATCCAGTTT+GGG + chr7_2:7224975-7224994 Msa1046610:CDS 30.0%
GATTCAAAAAGCAACAATCT+TGG + chr7_2:7225018-7225037 Msa1046610:CDS 30.0%
CTTGGCATTATTTATGAAAG+AGG + chr7_2:7225036-7225055 Msa1046610:CDS 30.0%
!! CTTTTTAAGCTCCTTTCTTA+AGG + chr7_2:7225118-7225137 Msa1046610:intron 30.0%
ACAAGTCAAAACCTTAAGAA+AGG - chr7_2:7225132-7225151 None:intergenic 30.0%
AACAAAAACTCACTGCAAAA+TGG - chr7_2:7225261-7225280 None:intergenic 30.0%
! CATTGTCATTTGTGAATGAA+TGG - chr7_2:7225460-7225479 None:intergenic 30.0%
CATTCATTCACAAATGACAA+TGG + chr7_2:7225458-7225477 Msa1046610:intron 30.0%
AATTCTGACACATCAGATTA+AGG + chr7_2:7225499-7225518 Msa1046610:intron 30.0%
ATTCTGACACATCAGATTAA+GGG + chr7_2:7225500-7225519 Msa1046610:intron 30.0%
TGTATCAAGATGTCCAAAAT+AGG - chr7_2:7225744-7225763 None:intergenic 30.0%
! TTCGTTATTTCGACTTCAAA+GGG - chr7_2:7225805-7225824 None:intergenic 30.0%
GTATCAAGTCATATGTTCTT+GGG - chr7_2:7225874-7225893 None:intergenic 30.0%
TGTATCAAGTCATATGTTCT+TGG - chr7_2:7225875-7225894 None:intergenic 30.0%
TATGACTTGATACATGCTTA+TGG + chr7_2:7225881-7225900 Msa1046610:CDS 30.0%
GACAGATATGTTACCATTAT+TGG - chr7_2:7225973-7225992 None:intergenic 30.0%
! ACAATATGAATGTTTGTTGC+AGG + chr7_2:7226032-7226051 Msa1046610:intron 30.0%
CTAATAATAACAGTTCCTTC+TGG - chr7_2:7226103-7226122 None:intergenic 30.0%
TGAGAACCATAATCATTTCT+GGG - chr7_2:7226228-7226247 None:intergenic 30.0%
TTGAGAACCATAATCATTTC+TGG - chr7_2:7226229-7226248 None:intergenic 30.0%
TGAAGTGAAAAAAGAGGAAG+TGG - chr7_2:7221929-7221948 None:intergenic 35.0%
AAGTGGTGAAGTGAAAAAAG+AGG - chr7_2:7221935-7221954 None:intergenic 35.0%
!! TTTTGTTGATGAAGGGTAAG+TGG - chr7_2:7221952-7221971 None:intergenic 35.0%
!!! TGGGATTGTTTTGTTGTTGT+TGG - chr7_2:7221979-7221998 None:intergenic 35.0%
!! TTCTTGTACCCTATTGGTTT+AGG - chr7_2:7222141-7222160 None:intergenic 35.0%
! TGTTCCTTTTACTAAGCTTG+TGG + chr7_2:7222206-7222225 Msa1046610:CDS 35.0%
!! TTCTTTTCCTGATGGTGTAA+AGG + chr7_2:7222296-7222315 Msa1046610:CDS 35.0%
!! TCTTTTCCTGATGGTGTAAA+GGG + chr7_2:7222297-7222316 Msa1046610:CDS 35.0%
CTCTTTGATATCAAAACTCG+CGG - chr7_2:7222459-7222478 None:intergenic 35.0%
CGTCGATGTTGCAAATATAA+AGG + chr7_2:7222546-7222565 Msa1046610:intron 35.0%
! TTCTTGTTCAACAGGTTGAA+TGG - chr7_2:7222607-7222626 None:intergenic 35.0%
TTAGTCGTTTCTTGTTCAAC+AGG - chr7_2:7222615-7222634 None:intergenic 35.0%
GAAACGACTAATTCACTGAT+TGG + chr7_2:7222624-7222643 Msa1046610:intron 35.0%
!! TTCACTGATTGGTTTGTTTC+CGG + chr7_2:7222635-7222654 Msa1046610:intron 35.0%
! CCGGTAAAAACTTTTGATCA+TGG - chr7_2:7222809-7222828 None:intergenic 35.0%
TAGCAGAGATATATACCTTG+AGG + chr7_2:7223005-7223024 Msa1046610:intron 35.0%
TAAAAATGTATGCTGCCTCA+AGG - chr7_2:7223023-7223042 None:intergenic 35.0%
TAATTGAAGGTAGCAAGCTT+TGG + chr7_2:7223146-7223165 Msa1046610:intron 35.0%
TATACCTAAGAGAGATTGAC+AGG + chr7_2:7223952-7223971 Msa1046610:CDS 35.0%
ATATCCTGTCAATCTCTCTT+AGG - chr7_2:7223959-7223978 None:intergenic 35.0%
TAGTTAACCCTCCAGTTTAT+AGG - chr7_2:7224017-7224036 None:intergenic 35.0%
AAAGGAACAGAACAGTTTAG+AGG + chr7_2:7224070-7224089 Msa1046610:CDS 35.0%
AACTTGCAATGCAAATGTGT+TGG + chr7_2:7224093-7224112 Msa1046610:CDS 35.0%
ACTTGCAATGCAAATGTGTT+GGG + chr7_2:7224094-7224113 Msa1046610:CDS 35.0%
TCACAAGTGTTTACGTTACT+AGG - chr7_2:7224374-7224393 None:intergenic 35.0%
TCTACATCAGAGTCTTTGTT+TGG - chr7_2:7224522-7224541 None:intergenic 35.0%
! TCATTCTCTTTTCTCAACCT+TGG - chr7_2:7224805-7224824 None:intergenic 35.0%
CAATGGTGAAATATCCAGTT+TGG + chr7_2:7224974-7224993 Msa1046610:CDS 35.0%
ACAACATTCATAACCCAAAC+TGG - chr7_2:7224991-7225010 None:intergenic 35.0%
ATTTATGAAAGAGGCCTCAT+AGG + chr7_2:7225045-7225064 Msa1046610:CDS 35.0%
AATCCATGTAAGTTCCTATG+AGG - chr7_2:7225062-7225081 None:intergenic 35.0%
TCATAGGAACTTACATGGAT+TGG + chr7_2:7225061-7225080 Msa1046610:CDS 35.0%
AGGAGCTTAAAAAGTCAACA+AGG - chr7_2:7225112-7225131 None:intergenic 35.0%
! TATATGTTGCTGTTGGAACT+TGG + chr7_2:7225342-7225361 Msa1046610:intron 35.0%
! CTTCGTTATTTCGACTTCAA+AGG - chr7_2:7225806-7225825 None:intergenic 35.0%
!! CTTTGAAGTCGAAATAACGA+AGG + chr7_2:7225804-7225823 Msa1046610:intron 35.0%
!!! AACAGCATTGTTTTGTTTGC+AGG + chr7_2:7225828-7225847 Msa1046610:intron 35.0%
! GTTCTTGGGTAAGTTGAAAA+GGG - chr7_2:7225860-7225879 None:intergenic 35.0%
! TGTTCTTGGGTAAGTTGAAA+AGG - chr7_2:7225861-7225880 None:intergenic 35.0%
TTCTCACCCAGAAATGATTA+TGG + chr7_2:7226219-7226238 Msa1046610:CDS 35.0%
AAAGGCTTCTTGTACCCTAT+TGG - chr7_2:7222147-7222166 None:intergenic 40.0%
TTACTCTTAGGCCAAGGAAA+AGG - chr7_2:7222165-7222184 None:intergenic 40.0%
! TTTTCCTTGGCCTAAGAGTA+AGG + chr7_2:7222164-7222183 Msa1046610:CDS 40.0%
CATGCATTGTCCTTACTCTT+AGG - chr7_2:7222177-7222196 None:intergenic 40.0%
CTAAGAGTAAGGACAATGCA+TGG + chr7_2:7222175-7222194 Msa1046610:CDS 40.0%
GTCACAGAATTGGATAAGGT+TGG + chr7_2:7222239-7222258 Msa1046610:CDS 40.0%
CAGAATTGGATAAGGTTGGA+TGG + chr7_2:7222243-7222262 Msa1046610:CDS 40.0%
ACATAACCCTTTACACCATC+AGG - chr7_2:7222306-7222325 None:intergenic 40.0%
GAAGCTTCTTCCTGTGAATT+TGG + chr7_2:7222338-7222357 Msa1046610:CDS 40.0%
! TTCCTGTGAATTTGGAGTCT+GGG + chr7_2:7222346-7222365 Msa1046610:CDS 40.0%
ACTGTTCTTGATGTTGGATG+TGG + chr7_2:7222378-7222397 Msa1046610:CDS 40.0%
CTGTTCTTGATGTTGGATGT+GGG + chr7_2:7222379-7222398 Msa1046610:CDS 40.0%
TGTTCTTGATGTTGGATGTG+GGG + chr7_2:7222380-7222399 Msa1046610:CDS 40.0%
ATTGTAGTCTGATGTGACAG+TGG + chr7_2:7222480-7222499 Msa1046610:intron 40.0%
!!! ATGTGACAGTGGTTTTGATG+CGG + chr7_2:7222491-7222510 Msa1046610:intron 40.0%
!! GCGGCTATAGTTCTAAATTG+TGG + chr7_2:7222510-7222529 Msa1046610:intron 40.0%
CTATTAAAACTGGACCGAAC+CGG + chr7_2:7222581-7222600 Msa1046610:intron 40.0%
ACGGATAAATGAGACTGATG+CGG - chr7_2:7222899-7222918 None:intergenic 40.0%
GCATCCATGATTCTTATGTG+TGG - chr7_2:7222971-7222990 None:intergenic 40.0%
TATCTCTGCTACAGTGATTG+AGG - chr7_2:7222996-7223015 None:intergenic 40.0%
!! AAGCTTTGGATCAGCTATGA+TGG + chr7_2:7223160-7223179 Msa1046610:CDS 40.0%
TGAGCATCATGTTCATCACT+TGG - chr7_2:7223215-7223234 None:intergenic 40.0%
GTGATGTTTGCACTTGAAAG+AGG + chr7_2:7223236-7223255 Msa1046610:CDS 40.0%
! TTGGAGTATTCAGCACTCAT+AGG + chr7_2:7223273-7223292 Msa1046610:CDS 40.0%
AGTTACCATTAGCAGTCCAA+GGG - chr7_2:7223352-7223371 None:intergenic 40.0%
AAGTTACCATTAGCAGTCCA+AGG - chr7_2:7223353-7223372 None:intergenic 40.0%
TGTCGAATACCAACATGTGT+CGG + chr7_2:7223540-7223559 Msa1046610:intron 40.0%
! TGACGTATCAGGTGTTACAT+AGG - chr7_2:7223600-7223619 None:intergenic 40.0%
CACCTGATACGTCATATTGA+AGG + chr7_2:7223606-7223625 Msa1046610:intron 40.0%
CTCCTTCAATATGACGTATC+AGG - chr7_2:7223611-7223630 None:intergenic 40.0%
TATCGTGTCAGTATTGTGTC+TGG + chr7_2:7223731-7223750 Msa1046610:intron 40.0%
TGTGTCTGGTATTTGTACCA+CGG + chr7_2:7223745-7223764 Msa1046610:intron 40.0%
AATATGTAGCATCTACACCG+TGG - chr7_2:7223765-7223784 None:intergenic 40.0%
TTTCTGGACCACCTATAAAC+TGG + chr7_2:7224003-7224022 Msa1046610:CDS 40.0%
TTAACCCTCCAGTTTATAGG+TGG - chr7_2:7224014-7224033 None:intergenic 40.0%
GGAGGGTTAACTATAAAGCA+TGG + chr7_2:7224024-7224043 Msa1046610:CDS 40.0%
! TGTTCCTTTTCCAACACTGT+TGG - chr7_2:7224059-7224078 None:intergenic 40.0%
TGTTGGGAAAAAGTTGCTGA+GGG + chr7_2:7224110-7224129 Msa1046610:CDS 40.0%
AGGGAGGACAAATTGCTATA+TGG + chr7_2:7224129-7224148 Msa1046610:CDS 40.0%
AATTCATCTGACTCTGATGC+TGG + chr7_2:7224218-7224237 Msa1046610:CDS 40.0%
! ATGTCTTTCACTTCTGGAAG+AGG - chr7_2:7224724-7224743 None:intergenic 40.0%
TCATCGATGTCTTTCACTTC+TGG - chr7_2:7224730-7224749 None:intergenic 40.0%
AAAGACATCGATGAAATCGC+CGG + chr7_2:7224736-7224755 Msa1046610:CDS 40.0%
GATTGAATGATTCACCACCA+AGG + chr7_2:7224785-7224804 Msa1046610:CDS 40.0%
! TTCTCTTTTCTCAACCTTGG+TGG - chr7_2:7224802-7224821 None:intergenic 40.0%
ATGCTCAAATCACTCTCATC+TGG + chr7_2:7224898-7224917 Msa1046610:CDS 40.0%
!! ATGGATATGAATGCTGGCTT+TGG + chr7_2:7224937-7224956 Msa1046610:CDS 40.0%
GACTTCAAAGGGTCATACTA+GGG - chr7_2:7225794-7225813 None:intergenic 40.0%
ACAGATAGAATGAGATGGGA+AGG + chr7_2:7226160-7226179 Msa1046610:CDS 40.0%
TCTTTGTACGACAACATGCT+TGG + chr7_2:7226283-7226302 Msa1046610:three_prime_UTR 40.0%
!!! TGTCTTTTGGGGTCTTCACA+TGG - chr7_2:7222039-7222058 None:intergenic 45.0%
! GGTACAAGAAGCCTTTTCCT+TGG + chr7_2:7222151-7222170 Msa1046610:CDS 45.0%
TTGTCCTTACTCTTAGGCCA+AGG - chr7_2:7222171-7222190 None:intergenic 45.0%
CACCACCAGGAAACACAAAA+CGG - chr7_2:7222272-7222291 None:intergenic 45.0%
! GGTGGTACTTCTTTTCCTGA+TGG + chr7_2:7222288-7222307 Msa1046610:CDS 45.0%
! CTTCCTGTGAATTTGGAGTC+TGG + chr7_2:7222345-7222364 Msa1046610:CDS 45.0%
! TGTTCAACAGGTTGAATGGC+CGG - chr7_2:7222603-7222622 None:intergenic 45.0%
AGCATGTGTTGAACCAACTC+TGG - chr7_2:7222699-7222718 None:intergenic 45.0%
! CTATTGCAGATTGGTGGTTG+CGG - chr7_2:7222873-7222892 None:intergenic 45.0%
ATGCGGTCACTATTGCAGAT+TGG - chr7_2:7222882-7222901 None:intergenic 45.0%
TGCGCCACACATAAGAATCA+TGG + chr7_2:7222964-7222983 Msa1046610:intron 45.0%
CTGAATACTCCAAGCATAGC+AGG - chr7_2:7223266-7223285 None:intergenic 45.0%
! GACACATGTTGAAGGTGTGT+CGG - chr7_2:7223511-7223530 None:intergenic 45.0%
GACACACCTTCAACATGTGT+CGG + chr7_2:7223510-7223529 Msa1046610:intron 45.0%
CAAACACCGACACATGTTGA+AGG - chr7_2:7223519-7223538 None:intergenic 45.0%
! CTTCAACATGTGTCGGTGTT+TGG + chr7_2:7223517-7223536 Msa1046610:intron 45.0%
! CTTCATGTTGAAGGCATGTC+TGG - chr7_2:7223569-7223588 None:intergenic 45.0%
ATGCCTTCAACATGAAGCGT+TGG + chr7_2:7223572-7223591 Msa1046610:intron 45.0%
!! CGTCATATTGAAGGAGTGTC+TGG + chr7_2:7223615-7223634 Msa1046610:intron 45.0%
!! ATTGAAGGAGTGTCTGGTGT+CGG + chr7_2:7223621-7223640 Msa1046610:intron 45.0%
CTGACACGATATGTCGACAA+CGG - chr7_2:7223722-7223741 None:intergenic 45.0%
ATTGACAGGATATTGCGTCC+TGG + chr7_2:7223966-7223985 Msa1046610:CDS 45.0%
TGGACCACCTATAAACTGGA+GGG + chr7_2:7224007-7224026 Msa1046610:CDS 45.0%
! AGAGCCAACAGTGTTGGAAA+AGG + chr7_2:7224052-7224071 Msa1046610:CDS 45.0%
GTGTTGGGAAAAAGTTGCTG+AGG + chr7_2:7224109-7224128 Msa1046610:CDS 45.0%
!! GATATGAATGCTGGCTTTGG+TGG + chr7_2:7224940-7224959 Msa1046610:CDS 45.0%
AGGCCTCATAGGAACTTACA+TGG + chr7_2:7225056-7225075 Msa1046610:CDS 45.0%
CGACTTCAAAGGGTCATACT+AGG - chr7_2:7225795-7225814 None:intergenic 45.0%
GATAGAATGAGATGGGAAGG+AGG + chr7_2:7226163-7226182 Msa1046610:CDS 45.0%
!! TATTAAAAACAATAAATTAA+GGG + chr7_2:7225523-7225542 Msa1046610:intron 5.0%
! GGTGACCGTTTTGTGTTTCC+TGG + chr7_2:7222264-7222283 Msa1046610:CDS 50.0%
! GACCGTTTTGTGTTTCCTGG+TGG + chr7_2:7222267-7222286 Msa1046610:CDS 50.0%
! CGTTTTGTGTTTCCTGGTGG+TGG + chr7_2:7222270-7222289 Msa1046610:CDS 50.0%
!! GGAAAAGAAGTACCACCACC+AGG - chr7_2:7222285-7222304 None:intergenic 50.0%
CTCCCAGACTCCAAATTCAC+AGG - chr7_2:7222351-7222370 None:intergenic 50.0%
! CTGTGAATTTGGAGTCTGGG+AGG + chr7_2:7222349-7222368 Msa1046610:CDS 50.0%
! AACAGGTTGAATGGCCGGTT+CGG - chr7_2:7222598-7222617 None:intergenic 50.0%
! AACCAACTCTGGCTCAATCC+CGG - chr7_2:7222688-7222707 None:intergenic 50.0%
CGGTCACTATTGCAGATTGG+TGG - chr7_2:7222879-7222898 None:intergenic 50.0%
AGAGGACTTCCTGCTATGCT+TGG + chr7_2:7223254-7223273 Msa1046610:CDS 50.0%
CATTAGCAGTCCAAGGGACA+AGG - chr7_2:7223346-7223365 None:intergenic 50.0%
CTTGTCCCTTGGACTGCTAA+TGG + chr7_2:7223344-7223363 Msa1046610:CDS 50.0%
CAGTGTTGCGTCTGTGTTAG+TGG - chr7_2:7223477-7223496 None:intergenic 50.0%
GTCTGGTATCCGACACATGT+TGG - chr7_2:7223552-7223571 None:intergenic 50.0%
GCACCAACGCTTCATGTTGA+AGG - chr7_2:7223578-7223597 None:intergenic 50.0%
!!! TATTGCGTCCTGGCGGATTT+TGG + chr7_2:7223976-7223995 Msa1046610:CDS 50.0%
!!! ATTGCGTCCTGGCGGATTTT+GGG + chr7_2:7223977-7223996 Msa1046610:CDS 50.0%
!! GAAAGTACCCAAAATCCGCC+AGG - chr7_2:7223987-7224006 None:intergenic 50.0%
!! GGCGGATTTTGGGTACTTTC+TGG + chr7_2:7223987-7224006 Msa1046610:CDS 50.0%
CTGGACCACCTATAAACTGG+AGG + chr7_2:7224006-7224025 Msa1046610:CDS 50.0%
GCAAACAGAGCCAACAGTGT+TGG + chr7_2:7224046-7224065 Msa1046610:CDS 50.0%
TGGGAAAAAGTTGCTGAGGG+AGG + chr7_2:7224113-7224132 Msa1046610:CDS 50.0%
CATCTGACTCTGATGCTGGA+TGG + chr7_2:7224222-7224241 Msa1046610:CDS 50.0%
CCATTTCTCAAGAACACCGC+CGG - chr7_2:7224758-7224777 None:intergenic 50.0%
!! TGGTGGATTTGCAGCTGCAA+TGG + chr7_2:7224957-7224976 Msa1046610:CDS 50.0%
CATCGGATTCTTCGTCCAGA+AGG + chr7_2:7226085-7226104 Msa1046610:CDS 50.0%
AACCGGGATTGAGCCAGAGT+TGG + chr7_2:7222683-7222702 Msa1046610:intron 55.0%
TCTTATGTGTGGCGCAGTCG+CGG - chr7_2:7222960-7222979 None:intergenic 55.0%
! GCTCTAGATGCCTTGTCCCT+TGG + chr7_2:7223333-7223352 Msa1046610:CDS 55.0%
GACAGGATATTGCGTCCTGG+CGG + chr7_2:7223969-7223988 Msa1046610:CDS 55.0%
GACATCGATGAAATCGCCGG+CGG + chr7_2:7224739-7224758 Msa1046610:CDS 55.0%
CCGGCGGTGTTCTTGAGAAA+TGG + chr7_2:7224755-7224774 Msa1046610:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 7221800 7226391 7221800 ID=Msa1046610;Name=Msa1046610
chr7_2 mRNA 7221800 7226391 7221800 ID=Msa1046610-mRNA-1;Parent=Msa1046610;Name=Msa1046610-mRNA-1;_AED=0.07;_eAED=0.07;_QI=65|1|1|1|0.8|0.83|6|127|580
chr7_2 exon 7221800 7222401 7221800 ID=Msa1046610-mRNA-1:exon:1745;Parent=Msa1046610-mRNA-1
chr7_2 exon 7223155 7223365 7223155 ID=Msa1046610-mRNA-1:exon:1746;Parent=Msa1046610-mRNA-1
chr7_2 exon 7223946 7224243 7223946 ID=Msa1046610-mRNA-1:exon:1747;Parent=Msa1046610-mRNA-1
chr7_2 exon 7224675 7225082 7224675 ID=Msa1046610-mRNA-1:exon:1748;Parent=Msa1046610-mRNA-1
chr7_2 exon 7225850 7225927 7225850 ID=Msa1046610-mRNA-1:exon:1749;Parent=Msa1046610-mRNA-1
chr7_2 exon 7226054 7226391 7226054 ID=Msa1046610-mRNA-1:exon:1750;Parent=Msa1046610-mRNA-1
chr7_2 five_prime_UTR 7221800 7221864 7221800 ID=Msa1046610-mRNA-1:five_prime_utr;Parent=Msa1046610-mRNA-1
chr7_2 CDS 7221865 7222401 7221865 ID=Msa1046610-mRNA-1:cds;Parent=Msa1046610-mRNA-1
chr7_2 CDS 7223155 7223365 7223155 ID=Msa1046610-mRNA-1:cds;Parent=Msa1046610-mRNA-1
chr7_2 CDS 7223946 7224243 7223946 ID=Msa1046610-mRNA-1:cds;Parent=Msa1046610-mRNA-1
chr7_2 CDS 7224675 7225082 7224675 ID=Msa1046610-mRNA-1:cds;Parent=Msa1046610-mRNA-1
chr7_2 CDS 7225850 7225927 7225850 ID=Msa1046610-mRNA-1:cds;Parent=Msa1046610-mRNA-1
chr7_2 CDS 7226054 7226264 7226054 ID=Msa1046610-mRNA-1:cds;Parent=Msa1046610-mRNA-1
chr7_2 three_prime_UTR 7226265 7226391 7226265 ID=Msa1046610-mRNA-1:three_prime_utr;Parent=Msa1046610-mRNA-1
Gene Sequence

>Msa1046610

ATGTTCTCAAAATATCTCAACATCTTCTTCATCACTACTCTCTTCATTTTCTTATACATAGCCACTTCCTCTTTTTTCACTTCACCACTTACCCTTCATCAACAAAATTCTCCAACAACAACAAAACAATCCCACTTTGAATTTTGTTCAACTAACTACACAAACTATTGTCCATGTGAAGACCCCAAAAGACAGAAAAAATTTCCAAAAAAAAACTATTTTCGCAAAGAACGTCACTGTCCACGAAACAATGAAAGATTAACATGTCTTATTCCTAAACCAATAGGGTACAAGAAGCCTTTTCCTTGGCCTAAGAGTAAGGACAATGCATGGTTTAGTAATGTTCCTTTTACTAAGCTTGTGGAATATAAAAAGTCACAGAATTGGATAAGGTTGGATGGTGACCGTTTTGTGTTTCCTGGTGGTGGTACTTCTTTTCCTGATGGTGTAAAGGGTTATGTTGATGATTTAAAGAAGCTTCTTCCTGTGAATTTGGAGTCTGGGAGGATTAGAACTGTTCTTGATGTTGGATGTGGGGTAGCAAGCTTTGGATCAGCTATGATGGACTATGATATATTGACAATGTCAATAGCACCAAGTGATGAACATGATGCTCAAGTGATGTTTGCACTTGAAAGAGGACTTCCTGCTATGCTTGGAGTATTCAGCACTCATAGGCTAACATTCCCTTCAAAATCATTTGATATGGCTCATTGCTCTAGATGCCTTGTCCCTTGGACTGCTAATGATGGACTATACCTAAGAGAGATTGACAGGATATTGCGTCCTGGCGGATTTTGGGTACTTTCTGGACCACCTATAAACTGGAGGGTTAACTATAAAGCATGGCAAACAGAGCCAACAGTGTTGGAAAAGGAACAGAACAGTTTAGAGGAACTTGCAATGCAAATGTGTTGGGAAAAAGTTGCTGAGGGAGGACAAATTGCTATATGGCAAAAACCAATAAATCATATAAAATGCATGCAAAAATTGAATACTTTGAGTTCTCCAAAGTTTTGCAATTCATCTGACTCTGATGCTGGATGCTATGAACTATTGAACAGGTATACAAAAATGACTGCATGCATTTTTCCTCTTCCAGAAGTGAAAGACATCGATGAAATCGCCGGCGGTGTTCTTGAGAAATGGCCTATAAGATTGAATGATTCACCACCAAGGTTGAGAAAAGAGAATGATGATGGTTTCACACTCAAAACCTATAGTGAAGATAATAGGATATGGAAAAAGAGATTATCTTACTATGAAGTCATGCTCAAATCACTCTCATCTGGTAAATATAGAAATGTTATGGATATGAATGCTGGCTTTGGTGGATTTGCAGCTGCAATGGTGAAATATCCAGTTTGGGTTATGAATGTTGTTCCGTTTGATTCAAAAAGCAACAATCTTGGCATTATTTATGAAAGAGGCCTCATAGGAACTTACATGGATTGGTGTGAGCCCTTTTCAACTTACCCAAGAACATATGACTTGATACATGCTTATGGCCTATTCAGTATGTATATTGACAAGTGTGACATTACTGATATTGTTATTGAGATGCATCGGATTCTTCGTCCAGAAGGAACTGTTATTATTAGAGACAGTAGAGATGTAATTTTGAAAGTAAAAGAAATAACAGATAGAATGAGATGGGAAGGAGGAATAGTAGTAGTTGCTGATGATCATAATGAATCTTCTCACCCAGAAATGATTATGGTTCTCAACAATAATACAAAGTAG
Protein sequence

>Msa1046610

MFSKYLNIFFITTLFIFLYIATSSFFTSPLTLHQQNSPTTTKQSHFEFCSTNYTNYCPCEDPKRQKKFPKKNYFRKERHCPRNNERLTCLIPKPIGYKKPFPWPKSKDNAWFSNVPFTKLVEYKKSQNWIRLDGDRFVFPGGGTSFPDGVKGYVDDLKKLLPVNLESGRIRTVLDVGCGVASFGSAMMDYDILTMSIAPSDEHDAQVMFALERGLPAMLGVFSTHRLTFPSKSFDMAHCSRCLVPWTANDGLYLREIDRILRPGGFWVLSGPPINWRVNYKAWQTEPTVLEKEQNSLEELAMQMCWEKVAEGGQIAIWQKPINHIKCMQKLNTLSSPKFCNSSDSDAGCYELLNRYTKMTACIFPLPEVKDIDEIAGGVLEKWPIRLNDSPPRLRKENDDGFTLKTYSEDNRIWKKRLSYYEVMLKSLSSGKYRNVMDMNAGFGGFAAAMVKYPVWVMNVVPFDSKSNNLGIIYERGLIGTYMDWCEPFSTYPRTYDLIHAYGLFSMYIDKCDITDIVIEMHRILRPEGTVIIRDSRDVILKVKEITDRMRWEGGIVVVADDHNESSHPEMIMVLNNNTK*