Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160520 | BAT79859.1 | 56.186 | 388 | 95 | 7 | 1 | 387 | 9 | 322 | 1.07e-140 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160520 | sp|Q9SQ68|COR13_PAPSO | 40.420 | 381 | 152 | 6 | 1 | 381 | 1 | 306 | 6.88e-76 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160520 | A0A0S3RGU0 | 56.186 | 388 | 95 | 7 | 1 | 387 | 9 | 322 | 5.12e-141 | 413 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002140 | Msa0160520 | 0.902905 | 6.006357e-79 | -8.615850e-47 |
| Msa0004610 | Msa0160520 | 0.832484 | 9.206106e-56 | -8.615850e-47 |
| Msa0006700 | Msa0160520 | 0.851471 | 8.688504e-61 | -8.615850e-47 |
| Msa0020630 | Msa0160520 | 0.825737 | 3.981668e-54 | -8.615850e-47 |
| Msa0021740 | Msa0160520 | 0.893635 | 5.230759e-75 | -8.615850e-47 |
| Msa0041000 | Msa0160520 | 0.804126 | 2.508423e-49 | -8.615850e-47 |
| Msa0055280 | Msa0160520 | 0.801865 | 7.360719e-49 | -8.615850e-47 |
| Msa0064550 | Msa0160520 | 0.817125 | 3.877336e-52 | -8.615850e-47 |
| Msa0069930 | Msa0160520 | 0.828013 | 1.137969e-54 | -8.615850e-47 |
| Msa0088550 | Msa0160520 | 0.809814 | 1.571182e-50 | -8.615850e-47 |
| Msa0101060 | Msa0160520 | 0.822261 | 2.603478e-53 | -8.615850e-47 |
| Msa0104360 | Msa0160520 | 0.847357 | 1.217158e-59 | -8.615850e-47 |
| Msa0104390 | Msa0160520 | 0.810077 | 1.379297e-50 | -8.615850e-47 |
| Msa0109490 | Msa0160520 | 0.833418 | 5.395789e-56 | -8.615850e-47 |
| Msa0135360 | Msa0160520 | 0.807497 | 4.909894e-50 | -8.615850e-47 |
| Msa0140910 | Msa0160520 | 0.804045 | 2.608039e-49 | -8.615850e-47 |
| Msa0153440 | Msa0160520 | 0.833844 | 4.222083e-56 | -8.615850e-47 |
| Msa0154240 | Msa0160520 | 0.839917 | 1.189242e-57 | -8.615850e-47 |
| Msa0159750 | Msa0160520 | 0.822479 | 2.317506e-53 | -8.615850e-47 |
| Msa0160520 | Msa0169960 | 0.800244 | 1.578143e-48 | -8.615850e-47 |
| Msa0160520 | Msa0179860 | 0.811996 | 5.294435e-51 | -8.615850e-47 |
| Msa0160520 | Msa0185640 | -0.817167 | 3.795251e-52 | -8.615850e-47 |
| Msa0160520 | Msa0198440 | 0.824355 | 8.444300e-54 | -8.615850e-47 |
| Msa0160520 | Msa0211010 | 0.801414 | 9.107958e-49 | -8.615850e-47 |
| Msa0160520 | Msa0213090 | 0.804674 | 1.929104e-49 | -8.615850e-47 |
| Msa0160520 | Msa0232860 | 0.840966 | 6.323889e-58 | -8.615850e-47 |
| Msa0160520 | Msa0235550 | 0.816372 | 5.721366e-52 | -8.615850e-47 |
| Msa0160520 | Msa0240780 | 0.805922 | 1.056180e-49 | -8.615850e-47 |
| Msa0160520 | Msa0253370 | 0.822472 | 2.326443e-53 | -8.615850e-47 |
| Msa0160520 | Msa0278670 | 0.823142 | 1.623781e-53 | -8.615850e-47 |
| Msa0160520 | Msa0282170 | 0.817384 | 3.390660e-52 | -8.615850e-47 |
| Msa0160520 | Msa0290650 | 0.802064 | 6.699517e-49 | -8.615850e-47 |
| Msa0160520 | Msa0292180 | 0.819466 | 1.144685e-52 | -8.615850e-47 |
| Msa0160520 | Msa0302990 | -0.804863 | 1.761325e-49 | -8.615850e-47 |
| Msa0160520 | Msa0318070 | 0.821631 | 3.643644e-53 | -8.615850e-47 |
| Msa0160520 | Msa0323630 | 0.818849 | 1.581495e-52 | -8.615850e-47 |
| Msa0160520 | Msa0326670 | 0.800756 | 1.241214e-48 | -8.615850e-47 |
| Msa0160520 | Msa0330400 | 0.815806 | 7.653076e-52 | -8.615850e-47 |
| Msa0160520 | Msa0340550 | 0.802762 | 4.809479e-49 | -8.615850e-47 |
| Msa0160520 | Msa0342340 | -0.809476 | 1.856704e-50 | -8.615850e-47 |
| Msa0160520 | Msa0350020 | 0.809414 | 1.914735e-50 | -8.615850e-47 |
| Msa0160520 | Msa0354390 | 0.805730 | 1.159163e-49 | -8.615850e-47 |
| Msa0160520 | Msa0363460 | 0.822318 | 2.526303e-53 | -8.615850e-47 |
| Msa0160520 | Msa0377280 | 0.818709 | 1.701498e-52 | -8.615850e-47 |
| Msa0160520 | Msa0389050 | 0.823661 | 1.228194e-53 | -8.615850e-47 |
| Msa0160520 | Msa0389060 | 0.827762 | 1.308212e-54 | -8.615850e-47 |
| Msa0160520 | Msa0404690 | 0.822605 | 2.166757e-53 | -8.615850e-47 |
| Msa0160520 | Msa0409820 | 0.802214 | 6.240077e-49 | -8.615850e-47 |
| Msa0160520 | Msa0411000 | 0.830212 | 3.334649e-55 | -8.615850e-47 |
| Msa0160520 | Msa0414070 | 0.807524 | 4.847785e-50 | -8.615850e-47 |
| Msa0160520 | Msa0431830 | 0.807761 | 4.315980e-50 | -8.615850e-47 |
| Msa0160520 | Msa0455230 | 0.827515 | 1.499606e-54 | -8.615850e-47 |
| Msa0160520 | Msa0457290 | 0.805927 | 1.053952e-49 | -8.615850e-47 |
| Msa0160520 | Msa0462590 | 0.825315 | 5.012461e-54 | -8.615850e-47 |
| Msa0160520 | Msa0530930 | 0.805236 | 1.471718e-49 | -8.615850e-47 |
| Msa0160520 | Msa0533460 | 0.817908 | 2.583094e-52 | -8.615850e-47 |
| Msa0160520 | Msa0540070 | 0.803917 | 2.772956e-49 | -8.615850e-47 |
| Msa0160520 | Msa0543900 | 0.802122 | 6.516258e-49 | -8.615850e-47 |
| Msa0160520 | Msa0549740 | 0.812467 | 4.178231e-51 | -8.615850e-47 |
| Msa0160520 | Msa0563140 | 0.840023 | 1.116034e-57 | -8.615850e-47 |
| Msa0160520 | Msa0589610 | 0.828414 | 9.112995e-55 | -8.615850e-47 |
| Msa0160520 | Msa0600820 | 0.841085 | 5.884691e-58 | -8.615850e-47 |
| Msa0160520 | Msa0620640 | 0.823569 | 1.291065e-53 | -8.615850e-47 |
| Msa0160520 | Msa0641020 | 0.811906 | 5.538569e-51 | -8.615850e-47 |
| Msa0160520 | Msa0657860 | 0.803875 | 2.828504e-49 | -8.615850e-47 |
| Msa0160520 | Msa0675010 | 0.807582 | 4.710122e-50 | -8.615850e-47 |
| Msa0160520 | Msa0686200 | 0.810192 | 1.302506e-50 | -8.615850e-47 |
| Msa0160520 | Msa0731710 | 0.815016 | 1.147096e-51 | -8.615850e-47 |
| Msa0160520 | Msa0744500 | 0.817573 | 3.075179e-52 | -8.615850e-47 |
| Msa0160520 | Msa0752580 | 0.856944 | 2.283405e-62 | -8.615850e-47 |
| Msa0160520 | Msa0754500 | 0.851197 | 1.038182e-60 | -8.615850e-47 |
| Msa0160520 | Msa0756480 | 0.806144 | 9.486979e-50 | -8.615850e-47 |
| Msa0160520 | Msa0760890 | 0.829613 | 4.667332e-55 | -8.615850e-47 |
| Msa0160520 | Msa0775580 | 0.831849 | 1.322112e-55 | -8.615850e-47 |
| Msa0160520 | Msa0788360 | 0.820827 | 5.582438e-53 | -8.615850e-47 |
| Msa0160520 | Msa0792510 | 0.821985 | 3.017458e-53 | -8.615850e-47 |
| Msa0160520 | Msa0811000 | 0.802810 | 4.700635e-49 | -8.615850e-47 |
| Msa0160520 | Msa0812970 | 0.810298 | 1.235651e-50 | -8.615850e-47 |
| Msa0160520 | Msa0813030 | 0.825575 | 4.349831e-54 | -8.615850e-47 |
| Msa0160520 | Msa0826650 | 0.818739 | 1.674952e-52 | -8.615850e-47 |
| Msa0160520 | Msa0828570 | 0.836108 | 1.135430e-56 | -8.615850e-47 |
| Msa0160520 | Msa0830900 | 0.838219 | 3.274316e-57 | -8.615850e-47 |
| Msa0160520 | Msa0835510 | 0.800321 | 1.522231e-48 | -8.615850e-47 |
| Msa0160520 | Msa0835920 | 0.814957 | 1.182126e-51 | -8.615850e-47 |
| Msa0160520 | Msa0843280 | 0.802854 | 4.603583e-49 | -8.615850e-47 |
| Msa0160520 | Msa0853500 | 0.842339 | 2.747284e-58 | -8.615850e-47 |
| Msa0160520 | Msa0864690 | 0.817965 | 2.507713e-52 | -8.615850e-47 |
| Msa0160520 | Msa0883450 | 0.822037 | 2.934708e-53 | -8.615850e-47 |
| Msa0160520 | Msa0899700 | 0.813519 | 2.456608e-51 | -8.615850e-47 |
| Msa0160520 | Msa0903730 | 0.805866 | 1.085598e-49 | -8.615850e-47 |
| Msa0160520 | Msa0909710 | 0.821863 | 3.219600e-53 | -8.615850e-47 |
| Msa0160520 | Msa0938420 | 0.812160 | 4.875554e-51 | -8.615850e-47 |
| Msa0160520 | Msa0951720 | 0.810207 | 1.293049e-50 | -8.615850e-47 |
| Msa0160520 | Msa0964680 | 0.838543 | 2.701780e-57 | -8.615850e-47 |
| Msa0160520 | Msa0970050 | 0.828343 | 9.475003e-55 | -8.615850e-47 |
| Msa0160520 | Msa0984000 | 0.825115 | 5.588038e-54 | -8.615850e-47 |
| Msa0160520 | Msa1004210 | 0.814867 | 1.238223e-51 | -8.615850e-47 |
| Msa0160520 | Msa1004260 | 0.803389 | 3.569234e-49 | -8.615850e-47 |
| Msa0160520 | Msa1036390 | 0.826200 | 3.091609e-54 | -8.615850e-47 |
| Msa0160520 | Msa1046610 | 0.816114 | 6.534104e-52 | -8.615850e-47 |
| Msa0160520 | Msa1054410 | 0.805600 | 1.234301e-49 | -8.615850e-47 |
| Msa0160520 | Msa1073500 | 0.800622 | 1.322072e-48 | -8.615850e-47 |
| Msa0160520 | Msa1076680 | 0.838973 | 2.092224e-57 | -8.615850e-47 |
| Msa0160520 | Msa1093390 | 0.817078 | 3.974084e-52 | -8.615850e-47 |
| Msa0160520 | Msa1095480 | 0.812490 | 4.130852e-51 | -8.615850e-47 |
| Msa0160520 | Msa1130650 | 0.807109 | 5.934587e-50 | -8.615850e-47 |
| Msa0160520 | Msa1138450 | 0.819695 | 1.014906e-52 | -8.615850e-47 |
| Msa0160520 | Msa1142500 | 0.803057 | 4.180043e-49 | -8.615850e-47 |
| Msa0160520 | Msa1148720 | 0.800603 | 1.334109e-48 | -8.615850e-47 |
| Msa0160520 | Msa1182830 | 0.873036 | 2.006758e-67 | -8.615850e-47 |
| Msa0160520 | Msa1184050 | 0.802100 | 6.584853e-49 | -8.615850e-47 |
| Msa0160520 | Msa1191390 | 0.800709 | 1.269292e-48 | -8.615850e-47 |
| Msa0160520 | Msa1195750 | 0.802217 | 6.228530e-49 | -8.615850e-47 |
| Msa0160520 | Msa1200960 | 0.808758 | 2.645931e-50 | -8.615850e-47 |
| Msa0160520 | Msa1204720 | 0.800909 | 1.155053e-48 | -8.615850e-47 |
| Msa0160520 | Msa1204980 | -0.809350 | 1.975925e-50 | -8.615850e-47 |
| Msa0160520 | Msa1205010 | -0.812938 | 3.295405e-51 | -8.615850e-47 |
| Msa0160520 | Msa1207480 | -0.808542 | 2.942490e-50 | -8.615850e-47 |
| Msa0160520 | Msa1225820 | 0.863529 | 2.332435e-64 | -8.615850e-47 |
| Msa0160520 | Msa1237260 | 0.828276 | 9.838225e-55 | -8.615850e-47 |
| Msa0160520 | Msa1241820 | 0.819075 | 1.404575e-52 | -8.615850e-47 |
| Msa0160520 | Msa1246560 | 0.809928 | 1.484597e-50 | -8.615850e-47 |
| Msa0160520 | Msa1253970 | 0.803003 | 4.288365e-49 | -8.615850e-47 |
| Msa0160520 | Msa1256540 | -0.814439 | 1.540093e-51 | -8.615850e-47 |
| Msa0160520 | Msa1258280 | 0.845852 | 3.136429e-59 | -8.615850e-47 |
| Msa0160520 | Msa1272130 | 0.802624 | 5.135930e-49 | -8.615850e-47 |
| Msa0160520 | Msa1279850 | 0.821710 | 3.493839e-53 | -8.615850e-47 |
| Msa0160520 | Msa1279860 | 0.810451 | 1.145456e-50 | -8.615850e-47 |
| Msa0160520 | Msa1279870 | 0.803430 | 3.498966e-49 | -8.615850e-47 |
| Msa0160520 | Msa1296960 | -0.811661 | 6.262085e-51 | -8.615850e-47 |
| Msa0160520 | Msa1298290 | 0.853360 | 2.516467e-61 | -8.615850e-47 |
| Msa0160520 | Msa1306190 | 0.803409 | 3.534707e-49 | -8.615850e-47 |
| Msa0160520 | Msa1306200 | 0.838216 | 3.281189e-57 | -8.615850e-47 |
| Msa0160520 | Msa1317710 | 0.832387 | 9.733557e-56 | -8.615850e-47 |
| Msa0160520 | Msa1336480 | 0.824425 | 8.129874e-54 | -8.615850e-47 |
| Msa0160520 | Msa1373950 | 0.821445 | 4.022242e-53 | -8.615850e-47 |
| Msa0160520 | Msa1423970 | 0.808740 | 2.670208e-50 | -8.615850e-47 |
| Msa0160520 | Msa1424510 | 0.802080 | 6.646988e-49 | -8.615850e-47 |
| Msa0160520 | Msa1445250 | 0.813784 | 2.147802e-51 | -8.615850e-47 |
| Msa0160520 | Msa1447440 | 0.842703 | 2.199408e-58 | -8.615850e-47 |
| Msa0160520 | Msa1450020 | 0.815754 | 7.860675e-52 | -8.615850e-47 |
| Msa0160520 | Msa1460310 | -0.804801 | 1.814398e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160520 | MtrunA17_Chr1g0173621 | 97.561 | 164 | 4 | 0 | 225 | 388 | 153 | 316 | 1.64e-115 | 339 |
| Msa0160520 | MtrunA17_Chr1g0173621 | 96.203 | 158 | 5 | 1 | 1 | 158 | 1 | 157 | 2.55e-104 | 310 |
| Msa0160520 | MtrunA17_Chr3g0121001 | 64.634 | 164 | 56 | 2 | 225 | 387 | 153 | 315 | 1.71e-70 | 224 |
| Msa0160520 | MtrunA17_Chr3g0121001 | 57.310 | 171 | 63 | 3 | 6 | 176 | 7 | 167 | 2.08e-56 | 187 |
| Msa0160520 | MtrunA17_Chr5g0447941 | 69.281 | 153 | 46 | 1 | 225 | 377 | 151 | 302 | 1.28e-67 | 216 |
| Msa0160520 | MtrunA17_Chr5g0447941 | 56.329 | 158 | 67 | 2 | 1 | 158 | 1 | 156 | 2.75e-47 | 163 |
| Msa0160520 | MtrunA17_Chr5g0447951 | 69.281 | 153 | 46 | 1 | 225 | 377 | 151 | 302 | 1.44e-67 | 216 |
| Msa0160520 | MtrunA17_Chr5g0447951 | 56.329 | 158 | 67 | 2 | 1 | 158 | 1 | 156 | 3.02e-47 | 163 |
| Msa0160520 | MtrunA17_Chr5g0447961 | 69.281 | 153 | 46 | 1 | 225 | 377 | 151 | 302 | 1.44e-67 | 216 |
| Msa0160520 | MtrunA17_Chr5g0447961 | 56.329 | 158 | 67 | 2 | 1 | 158 | 1 | 156 | 3.02e-47 | 163 |
| Msa0160520 | MtrunA17_Chr6g0480011 | 36.962 | 395 | 167 | 10 | 1 | 387 | 1 | 321 | 3.60e-65 | 210 |
| Msa0160520 | MtrunA17_Chr4g0036301 | 55.556 | 171 | 68 | 1 | 225 | 387 | 1 | 171 | 3.96e-60 | 192 |
| Msa0160520 | MtrunA17_Chr4g0036261 | 55.814 | 172 | 68 | 1 | 225 | 388 | 13 | 184 | 8.39e-60 | 191 |
| Msa0160520 | MtrunA17_Chr6g0480021 | 55.556 | 171 | 68 | 1 | 225 | 387 | 132 | 302 | 3.23e-59 | 194 |
| Msa0160520 | MtrunA17_Chr6g0480021 | 44.586 | 157 | 65 | 3 | 1 | 157 | 1 | 135 | 5.63e-34 | 128 |
| Msa0160520 | MtrunA17_Chr6g0479981 | 55.030 | 169 | 68 | 1 | 225 | 385 | 149 | 317 | 7.39e-57 | 188 |
| Msa0160520 | MtrunA17_Chr6g0479981 | 49.045 | 157 | 75 | 3 | 1 | 157 | 1 | 152 | 1.32e-40 | 146 |
| Msa0160520 | MtrunA17_Chr4g0036321 | 52.907 | 172 | 73 | 1 | 225 | 388 | 1 | 172 | 2.74e-56 | 182 |
| Msa0160520 | MtrunA17_Chr4g0018921 | 41.860 | 172 | 91 | 1 | 225 | 387 | 143 | 314 | 4.96e-41 | 147 |
| Msa0160520 | MtrunA17_Chr4g0018921 | 44.604 | 139 | 70 | 6 | 20 | 157 | 14 | 146 | 1.68e-30 | 119 |
| Msa0160520 | MtrunA17_Chr8g0368931 | 40.698 | 172 | 93 | 1 | 225 | 387 | 143 | 314 | 4.00e-40 | 144 |
| Msa0160520 | MtrunA17_Chr8g0368931 | 37.500 | 136 | 79 | 3 | 18 | 153 | 14 | 143 | 7.16e-19 | 86.7 |
| Msa0160520 | MtrunA17_Chr7g0239701 | 44.767 | 172 | 85 | 2 | 225 | 387 | 147 | 317 | 4.82e-40 | 144 |
| Msa0160520 | MtrunA17_Chr7g0239701 | 40.385 | 104 | 59 | 2 | 50 | 153 | 47 | 147 | 4.21e-19 | 87.4 |
| Msa0160520 | MtrunA17_Chr4g0009531 | 43.023 | 172 | 87 | 3 | 225 | 387 | 143 | 312 | 1.81e-39 | 143 |
| Msa0160520 | MtrunA17_Chr4g0009531 | 38.971 | 136 | 77 | 4 | 18 | 153 | 14 | 143 | 3.86e-15 | 75.5 |
| Msa0160520 | MtrunA17_Chr8g0368921 | 41.279 | 172 | 90 | 2 | 225 | 387 | 149 | 318 | 8.12e-39 | 141 |
| Msa0160520 | MtrunA17_Chr8g0368921 | 38.849 | 139 | 79 | 4 | 18 | 153 | 14 | 149 | 7.30e-24 | 100 |
| Msa0160520 | MtrunA17_Chr4g0009621 | 39.535 | 172 | 91 | 3 | 225 | 387 | 61 | 228 | 1.69e-33 | 124 |
| Msa0160520 | MtrunA17_Chr7g0243551 | 28.653 | 349 | 168 | 7 | 19 | 367 | 22 | 289 | 2.10e-32 | 124 |
| Msa0160520 | MtrunA17_Chr4g0009581 | 41.722 | 151 | 84 | 2 | 225 | 375 | 137 | 283 | 4.05e-32 | 123 |
| Msa0160520 | MtrunA17_Chr4g0009581 | 41.593 | 113 | 56 | 2 | 41 | 153 | 35 | 137 | 9.77e-16 | 77.4 |
| Msa0160520 | MtrunA17_Chr6g0479811 | 52.336 | 107 | 51 | 0 | 265 | 371 | 1 | 107 | 5.40e-32 | 117 |
| Msa0160520 | MtrunA17_Chr4g0036291 | 50.459 | 109 | 51 | 1 | 1 | 109 | 1 | 106 | 2.78e-31 | 115 |
| Msa0160520 | MtrunA17_Chr4g0036311 | 47.706 | 109 | 54 | 1 | 1 | 109 | 1 | 106 | 7.35e-30 | 111 |
| Msa0160520 | MtrunA17_Chr4g0036051 | 35.088 | 171 | 103 | 2 | 217 | 379 | 132 | 302 | 4.78e-29 | 114 |
| Msa0160520 | MtrunA17_Chr4g0036051 | 39.716 | 141 | 72 | 5 | 20 | 153 | 11 | 145 | 1.50e-15 | 76.6 |
| Msa0160520 | MtrunA17_Chr4g0036251 | 49.541 | 109 | 46 | 2 | 1 | 109 | 1 | 100 | 2.50e-28 | 107 |
| Msa0160520 | MtrunA17_Chr6g0479791 | 48.837 | 86 | 34 | 2 | 312 | 387 | 18 | 103 | 3.52e-19 | 82.0 |
| Msa0160520 | MtrunA17_Chr3g0101191 | 50.649 | 77 | 30 | 1 | 136 | 212 | 1058 | 1126 | 1.43e-15 | 79.0 |
| Msa0160520 | MtrunA17_Chr8g0373061 | 44.706 | 85 | 42 | 1 | 154 | 233 | 243 | 327 | 1.20e-12 | 68.6 |
| Msa0160520 | MtrunA17_Chr1g0153361 | 44.737 | 76 | 34 | 1 | 136 | 211 | 1448 | 1515 | 8.98e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160520 | AT5G62420.1 | 37.135 | 377 | 153 | 6 | 20 | 387 | 14 | 315 | 1.90e-74 | 234 |
| Msa0160520 | AT1G59950.1 | 53.073 | 179 | 75 | 2 | 218 | 387 | 141 | 319 | 5.32e-66 | 213 |
| Msa0160520 | AT1G59950.1 | 55.396 | 139 | 61 | 1 | 20 | 158 | 15 | 152 | 1.95e-37 | 138 |
| Msa0160520 | AT1G59960.1 | 53.073 | 179 | 75 | 2 | 218 | 387 | 147 | 325 | 7.07e-64 | 207 |
| Msa0160520 | AT1G59960.1 | 47.799 | 159 | 81 | 2 | 1 | 158 | 1 | 158 | 2.89e-45 | 159 |
| Msa0160520 | AT2G37770.2 | 44.186 | 172 | 87 | 1 | 225 | 387 | 143 | 314 | 8.89e-43 | 152 |
| Msa0160520 | AT2G37770.2 | 37.500 | 136 | 79 | 3 | 18 | 153 | 14 | 143 | 3.16e-22 | 96.7 |
| Msa0160520 | AT2G37790.1 | 42.105 | 171 | 91 | 1 | 225 | 387 | 143 | 313 | 3.84e-41 | 147 |
| Msa0160520 | AT2G37790.1 | 40.441 | 136 | 75 | 3 | 18 | 153 | 14 | 143 | 2.57e-24 | 102 |
| Msa0160520 | AT3G53880.1 | 41.279 | 172 | 92 | 1 | 225 | 387 | 143 | 314 | 2.58e-40 | 145 |
| Msa0160520 | AT3G53880.1 | 41.121 | 107 | 60 | 2 | 47 | 153 | 40 | 143 | 7.89e-20 | 89.7 |
| Msa0160520 | AT3G53880.2 | 43.151 | 146 | 83 | 0 | 225 | 370 | 143 | 288 | 1.24e-37 | 138 |
| Msa0160520 | AT3G53880.2 | 41.121 | 107 | 60 | 2 | 47 | 153 | 40 | 143 | 5.99e-20 | 90.1 |
| Msa0160520 | AT2G37760.6 | 40.698 | 172 | 93 | 1 | 225 | 387 | 93 | 264 | 3.26e-36 | 133 |
| Msa0160520 | AT2G37760.6 | 41.573 | 89 | 49 | 2 | 65 | 153 | 8 | 93 | 5.61e-14 | 72.0 |
| Msa0160520 | AT2G37760.7 | 40.698 | 172 | 93 | 1 | 225 | 387 | 93 | 264 | 3.26e-36 | 133 |
| Msa0160520 | AT2G37760.7 | 41.573 | 89 | 49 | 2 | 65 | 153 | 8 | 93 | 5.61e-14 | 72.0 |
| Msa0160520 | AT2G37760.2 | 40.698 | 172 | 93 | 1 | 225 | 387 | 139 | 310 | 7.86e-36 | 133 |
| Msa0160520 | AT2G37760.2 | 41.176 | 136 | 70 | 3 | 18 | 153 | 14 | 139 | 8.65e-26 | 106 |
| Msa0160520 | AT2G37760.1 | 40.698 | 172 | 93 | 1 | 225 | 387 | 139 | 310 | 7.86e-36 | 133 |
| Msa0160520 | AT2G37760.1 | 41.176 | 136 | 70 | 3 | 18 | 153 | 14 | 139 | 8.65e-26 | 106 |
| Msa0160520 | AT2G37760.5 | 43.537 | 147 | 83 | 0 | 225 | 371 | 139 | 285 | 1.30e-35 | 132 |
| Msa0160520 | AT2G37760.5 | 41.176 | 136 | 70 | 3 | 18 | 153 | 14 | 139 | 5.34e-26 | 106 |
| Msa0160520 | AT2G37760.4 | 43.243 | 148 | 84 | 0 | 225 | 372 | 139 | 286 | 1.32e-35 | 132 |
| Msa0160520 | AT2G37760.4 | 41.176 | 136 | 70 | 3 | 18 | 153 | 14 | 139 | 5.34e-26 | 106 |
| Msa0160520 | AT2G37760.3 | 43.243 | 148 | 84 | 0 | 225 | 372 | 139 | 286 | 1.32e-35 | 132 |
| Msa0160520 | AT2G37760.3 | 41.176 | 136 | 70 | 3 | 18 | 153 | 14 | 139 | 5.34e-26 | 106 |
| Msa0160520 | AT2G21250.1 | 33.918 | 171 | 105 | 2 | 217 | 379 | 132 | 302 | 7.77e-29 | 114 |
| Msa0160520 | AT2G21250.1 | 40.367 | 109 | 59 | 3 | 20 | 128 | 11 | 113 | 2.05e-18 | 85.5 |
| Msa0160520 | AT2G21260.2 | 33.540 | 161 | 99 | 2 | 217 | 369 | 64 | 224 | 1.61e-28 | 112 |
| Msa0160520 | AT5G01670.1 | 34.286 | 175 | 101 | 3 | 224 | 387 | 150 | 321 | 2.80e-28 | 113 |
| Msa0160520 | AT5G01670.1 | 42.537 | 134 | 71 | 3 | 20 | 153 | 24 | 151 | 3.53e-28 | 113 |
| Msa0160520 | AT5G01670.2 | 34.286 | 175 | 101 | 3 | 224 | 387 | 177 | 348 | 3.17e-28 | 114 |
| Msa0160520 | AT5G01670.2 | 35.404 | 161 | 71 | 4 | 20 | 153 | 24 | 178 | 9.82e-23 | 98.6 |
| Msa0160520 | AT2G21260.1 | 33.540 | 161 | 99 | 2 | 217 | 369 | 132 | 292 | 8.20e-28 | 112 |
| Msa0160520 | AT2G21260.1 | 44.037 | 109 | 55 | 4 | 20 | 128 | 11 | 113 | 4.66e-19 | 87.4 |
| Msa0160520 | AT2G37770.1 | 42.478 | 113 | 62 | 2 | 41 | 153 | 34 | 143 | 1.06e-22 | 97.1 |
| Msa0160520 | AT2G37770.1 | 53.226 | 62 | 29 | 0 | 225 | 286 | 143 | 204 | 5.92e-15 | 75.1 |
| Msa0160520 | AT2G21250.2 | 40.367 | 109 | 59 | 3 | 20 | 128 | 11 | 113 | 9.33e-19 | 85.1 |
| Msa0160520 | AT2G21250.2 | 35.294 | 102 | 58 | 2 | 217 | 310 | 132 | 233 | 1.05e-13 | 70.5 |
| Msa0160520 | AT1G06690.1 | 28.652 | 178 | 95 | 7 | 232 | 381 | 200 | 373 | 9.50e-11 | 63.2 |
Find 106 sgRNAs with CRISPR-Local
Find 512 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCATGAAATTAGAATATT+TGG | 0.170879 | 1_4:-33179387 | Msa0160520:CDS |
| GCTCTTCAACTTGGTCTAAT+TGG | 0.184953 | 1_4:-33181032 | Msa0160520:CDS |
| AACAATCTTTGAGAAAATTA+TGG | 0.207584 | 1_4:-33173674 | Msa0160520:three_prime_UTR |
| TTCTTCCATTTGTAGGTTTA+TGG | 0.227294 | 1_4:+33174729 | None:intergenic |
| CCTTGCTCAATTTCTCCTTT+TGG | 0.237834 | 1_4:+33175739 | None:intergenic |
| GGATATTACAGAAGCCTTAT+TGG | 0.249856 | 1_4:-33175690 | Msa0160520:CDS |
| TCAGTGTGAAGCCGGGAAAT+TGG | 0.256916 | 1_4:-33179340 | Msa0160520:CDS |
| TTGTGTTCATTCCTAACCTT+TGG | 0.306436 | 1_4:-33173831 | Msa0160520:CDS |
| CTCCTTGTTGTAGCTCTTCA+CGG | 0.307425 | 1_4:+33173954 | None:intergenic |
| GGAAACTTAAGCCCAATATT+AGG | 0.313169 | 1_4:-33173803 | Msa0160520:exon |
| ATTGTTAGTGACCCAAAGTT+TGG | 0.316108 | 1_4:+33180983 | None:intergenic |
| TTTGACACTGCATCAATATA+TGG | 0.316665 | 1_4:-33181089 | Msa0160520:CDS |
| TCTGGCATTCTTCCATTTGT+AGG | 0.322211 | 1_4:+33174722 | None:intergenic |
| ATGGAAGAATGCCAGAAATT+AGG | 0.323344 | 1_4:-33174715 | Msa0160520:CDS |
| GTCCAAATATTCTAATTTCA+TGG | 0.352675 | 1_4:+33179385 | None:intergenic |
| TAGTGGACTGAACCTAATAT+TGG | 0.355352 | 1_4:+33173791 | None:intergenic |
| ACTACCCCAACTGGCCCCTT+TGG | 0.355628 | 1_4:+33174310 | None:intergenic |
| TTATGGATTCAAGGAATTCA+TGG | 0.360980 | 1_4:-33173657 | None:intergenic |
| CTTTATCACCTCCAAACTTT+GGG | 0.366153 | 1_4:-33180994 | Msa0160520:CDS |
| ATAACCGCTTTCTCTCCTTT+AGG | 0.371890 | 1_4:-33174335 | Msa0160520:CDS |
| CAGTGTGAAGCCGGGAAATT+GGG | 0.376439 | 1_4:-33179339 | Msa0160520:CDS |
| AGCTTCTTCTGATGCCAAAC+TGG | 0.376503 | 1_4:+33174389 | None:intergenic |
| TGTGTTCATTCCTAACCTTT+GGG | 0.382649 | 1_4:-33173830 | Msa0160520:CDS |
| AGGAGCCAAAGGGGCCAGTT+GGG | 0.383611 | 1_4:-33174315 | Msa0160520:CDS |
| GTAATTGAAGCGATCAAATC+AGG | 0.386781 | 1_4:-33181122 | Msa0160520:CDS |
| TCTTTATCACCTCCAAACTT+TGG | 0.397007 | 1_4:-33180995 | Msa0160520:CDS |
| GTTTCCCCATCCCAAAGGTT+AGG | 0.400915 | 1_4:+33173820 | None:intergenic |
| ATTTGCTATCATTCCTCCTT+CGG | 0.405885 | 1_4:-33174632 | Msa0160520:CDS |
| TTGAGAAAATTATGGATTCA+AGG | 0.407390 | 1_4:-33173666 | Msa0160520:three_prime_UTR |
| TACGGCAATTCCCAATTTCC+CGG | 0.409708 | 1_4:+33179329 | None:intergenic |
| TATGGCTCAGAAGAGGCTTT+AGG | 0.410339 | 1_4:-33181071 | Msa0160520:CDS |
| AAAACTTGGAAATATTTGAT+TGG | 0.411973 | 1_4:-33173921 | Msa0160520:CDS |
| CACTGGCATGTTACATTGGT+TGG | 0.417583 | 1_4:+33181202 | None:intergenic |
| TTAGGCCTTGCAAAATCTAT+AGG | 0.418202 | 1_4:-33174697 | Msa0160520:CDS |
| TGGACCTTTATTTGATCCAC+TGG | 0.428214 | 1_4:-33179367 | Msa0160520:CDS |
| GATACATTAAACATCCAATA+AGG | 0.430237 | 1_4:+33175676 | None:intergenic |
| TTCATTCCTAACCTTTGGGA+TGG | 0.431912 | 1_4:-33173826 | Msa0160520:CDS |
| GTATGAGCAAGGGGTGACTA+TGG | 0.442420 | 1_4:-33173977 | Msa0160520:CDS |
| AACTTCATTACTACCCCAAC+TGG | 0.445320 | 1_4:+33174301 | None:intergenic |
| TTTCCCGGCTTCACACTGAT+TGG | 0.447551 | 1_4:+33179344 | None:intergenic |
| TTCTCTCCTTTAGGAGCCAA+AGG | 0.450688 | 1_4:-33174326 | Msa0160520:CDS |
| AGTGGACTGAACCTAATATT+GGG | 0.451967 | 1_4:+33173792 | None:intergenic |
| TTCTACCATAAACCTACAAA+TGG | 0.453403 | 1_4:-33174734 | Msa0160520:CDS |
| GTTATTAATTCTTCAGCATA+CGG | 0.462926 | 1_4:+33179311 | None:intergenic |
| CTGGCCAATCAGTGTGAAGC+CGG | 0.465201 | 1_4:-33179348 | Msa0160520:CDS |
| TTGGGGTAGTAATGAAGTTA+TGG | 0.468928 | 1_4:-33174297 | Msa0160520:CDS |
| CATTCCTAACCTTTGGGATG+GGG | 0.471590 | 1_4:-33173824 | Msa0160520:CDS |
| TCTCTCCTTTAGGAGCCAAA+GGG | 0.478990 | 1_4:-33174325 | Msa0160520:CDS |
| AACAGATTCGTGTCAACAAT+GGG | 0.479432 | 1_4:-33173858 | Msa0160520:CDS |
| AACATGCCAGTGATAGCATT+TGG | 0.480266 | 1_4:-33181191 | Msa0160520:CDS |
| TGGAGTGATTTCTGAAGAGC+AGG | 0.480636 | 1_4:+33180942 | None:intergenic |
| AGGTTAGGAATGAACACAAC+TGG | 0.482133 | 1_4:+33173835 | None:intergenic |
| TATTCGTGTTGGTGGCGACC+TGG | 0.485435 | 1_4:-33181393 | None:intergenic |
| GGAGAGAATGAAGCAAAACT+TGG | 0.486339 | 1_4:-33173935 | Msa0160520:CDS |
| TAGGAGCCAAAGGGGCCAGT+TGG | 0.490078 | 1_4:-33174316 | Msa0160520:CDS |
| CTTACAGCGAATAGAATGTC+TGG | 0.497746 | 1_4:+33175639 | None:intergenic |
| TCACGCTAAAGTGATGATAG+TGG | 0.498222 | 1_4:+33173774 | None:intergenic |
| TGTTATAGGTATGTCTTAGA+TGG | 0.498955 | 1_4:-33174002 | Msa0160520:intron |
| ATATAAAAGCAAGAAAATGA+TGG | 0.501416 | 1_4:+33181332 | None:intergenic |
| TCATTCCTAACCTTTGGGAT+GGG | 0.502283 | 1_4:-33173825 | Msa0160520:CDS |
| AAGATTTCAGCACAACTTGA+GGG | 0.504815 | 1_4:+33181228 | None:intergenic |
| AGGTGGAGATGAATCCAGTT+TGG | 0.508462 | 1_4:-33174403 | Msa0160520:CDS |
| ATCATCACTTTAGCGTGAAT+AGG | 0.509058 | 1_4:-33173769 | Msa0160520:three_prime_UTR |
| TTGGCCAGTGGATCAAATAA+AGG | 0.518534 | 1_4:+33179363 | None:intergenic |
| CTTACTTGATTGACCGAAGG+AGG | 0.519682 | 1_4:+33174619 | None:intergenic |
| GAAGCAAGAAATACGTTGAA+AGG | 0.521302 | 1_4:+33174770 | None:intergenic |
| CTGGCCCCTTTGGCTCCTAA+AGG | 0.523489 | 1_4:+33174320 | None:intergenic |
| CACAAACACAATAATATGCC+AGG | 0.526971 | 1_4:+33181375 | None:intergenic |
| AAAAGAATACTGTGAAGCAA+AGG | 0.527118 | 1_4:-33174366 | Msa0160520:CDS |
| GAAGATTTCAGCACAACTTG+AGG | 0.530579 | 1_4:+33181227 | None:intergenic |
| GTTAGTGACCCAAAGTTTGG+AGG | 0.534520 | 1_4:+33180986 | None:intergenic |
| GAGAAATTGAGCAAGGAAGA+TGG | 0.540058 | 1_4:-33175732 | Msa0160520:CDS |
| GGAGCCAAAGGGGCCAGTTG+GGG | 0.542781 | 1_4:-33174314 | Msa0160520:CDS |
| GCGTGAATAGGACAAAACTT+AGG | 0.545282 | 1_4:-33173757 | Msa0160520:three_prime_UTR |
| AAACAGATTCGTGTCAACAA+TGG | 0.549643 | 1_4:-33173859 | Msa0160520:CDS |
| TATAAAAGCAAGAAAATGAT+GGG | 0.550689 | 1_4:+33181333 | None:intergenic |
| AAAGAATACTGTGAAGCAAA+GGG | 0.552823 | 1_4:-33174365 | Msa0160520:CDS |
| GCCGTACCAAATGCTATCAC+TGG | 0.552904 | 1_4:+33181185 | None:intergenic |
| CTTAGATGGTTGTATGAGCA+AGG | 0.553980 | 1_4:-33173988 | Msa0160520:CDS |
| TGGCCAATCAGTGTGAAGCC+GGG | 0.555485 | 1_4:-33179347 | Msa0160520:CDS |
| ATAGAAGAAGCTCTTCAACT+TGG | 0.557954 | 1_4:-33181041 | Msa0160520:CDS |
| ATAACCACATTTGATCTGAA+AGG | 0.559708 | 1_4:-33179293 | Msa0160520:CDS |
| TAGCACACCAATGAACCAAA+AGG | 0.568092 | 1_4:-33175754 | Msa0160520:CDS |
| CTATCACTGGCATGTTACAT+TGG | 0.572838 | 1_4:+33181198 | None:intergenic |
| CACTCCTTTCAGATCAAATG+TGG | 0.582449 | 1_4:+33179289 | None:intergenic |
| AGCAAGAAAATGATGGGACA+TGG | 0.583699 | 1_4:+33181339 | None:intergenic |
| GCCAGTGATAGCATTTGGTA+CGG | 0.589659 | 1_4:-33181186 | Msa0160520:CDS |
| TGGCTTACTTGATTGACCGA+AGG | 0.592154 | 1_4:+33174616 | None:intergenic |
| CTTAAGTTTCCCCATCCCAA+AGG | 0.597848 | 1_4:+33173815 | None:intergenic |
| AAGCAAATTGCAGAGGAACA+TGG | 0.600046 | 1_4:-33174260 | Msa0160520:CDS |
| ATCAATATATGGCTCAGAAG+AGG | 0.615079 | 1_4:-33181078 | Msa0160520:CDS |
| CCAAAAGGAGAAATTGAGCA+AGG | 0.616797 | 1_4:-33175739 | Msa0160520:CDS |
| GGCTCCTAAAGGAGAGAAAG+CGG | 0.617316 | 1_4:+33174331 | None:intergenic |
| GGTGCTGAGAAAATTGATGA+AGG | 0.625370 | 1_4:-33175711 | Msa0160520:CDS |
| AGAGCAGGAAGAACAAGATG+AGG | 0.626023 | 1_4:+33180957 | None:intergenic |
| TAGATGGTTGTATGAGCAAG+GGG | 0.628862 | 1_4:-33173986 | Msa0160520:CDS |
| AAGAAAATGATGGGACATGG+AGG | 0.634480 | 1_4:+33181342 | None:intergenic |
| TTAGATGGTTGTATGAGCAA+GGG | 0.638177 | 1_4:-33173987 | Msa0160520:CDS |
| CTCTCCTTTAGGAGCCAAAG+GGG | 0.646505 | 1_4:-33174324 | Msa0160520:CDS |
| GCTTCACACTGATTGGCCAG+TGG | 0.662823 | 1_4:+33179351 | None:intergenic |
| GGCCGTGAAGAGCTACAACA+AGG | 0.663421 | 1_4:-33173956 | Msa0160520:CDS |
| CATTTGATCTGAAAGGAGTG+TGG | 0.668530 | 1_4:-33179286 | Msa0160520:CDS |
| GAAAGGAGTGTGGACAGCAA+TGG | 0.675284 | 1_4:-33179276 | Msa0160520:intron |
| AATACTCAAGCAAATTGCAG+AGG | 0.683311 | 1_4:-33174267 | Msa0160520:CDS |
| GCAGCTGTAACAAACAACGA+TGG | 0.714604 | 1_4:-33181164 | Msa0160520:CDS |
| TAATGTATCTTACTGCAACG+AGG | 0.733811 | 1_4:-33175662 | Msa0160520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTATTTGTATGATTTT+TGG | + | chr1_4:33174237-33174256 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTAGAGAATTATA+AGG | - | chr1_4:33174665-33174684 | Msa0160520:CDS | 10.0% |
| !!! | TTTTTTTTAGAGAATTATAA+GGG | - | chr1_4:33174666-33174685 | Msa0160520:CDS | 10.0% |
| !!! | ATTTTTTATCAGATATTTAT+AGG | + | chr1_4:33175123-33175142 | None:intergenic | 10.0% |
| !!! | AACTAAAAATACAATTTTTT+TGG | - | chr1_4:33181339-33181358 | Msa0160520:five_prime_UTR | 10.0% |
| !!! | AAAAATGAAAACCATATTTT+TGG | + | chr1_4:33174306-33174325 | None:intergenic | 15.0% |
| !!! | AAAAACATAACTTTTAAGTA+TGG | - | chr1_4:33174974-33174993 | Msa0160520:intron | 15.0% |
| !! | AGAATATTGAGATATATTAA+AGG | - | chr1_4:33179479-33179498 | Msa0160520:intron | 15.0% |
| !! | TATAAAAGCAAGAAAATGAT+GGG | + | chr1_4:33173710-33173729 | None:intergenic | 20.0% |
| !! | ATATAAAAGCAAGAAAATGA+TGG | + | chr1_4:33173711-33173730 | None:intergenic | 20.0% |
| !!! | TAATAGTTCTAAATTGAAAG+AGG | + | chr1_4:33174140-33174159 | None:intergenic | 20.0% |
| !! | AGAATTATCATTATTCAAAG+TGG | - | chr1_4:33174356-33174375 | Msa0160520:CDS | 20.0% |
| !!! | ACAACTATTATTTTTTGAAG+TGG | + | chr1_4:33174799-33174818 | None:intergenic | 20.0% |
| !!! | CTTAAAAGTTATGTTTTTTG+TGG | + | chr1_4:33174972-33174991 | None:intergenic | 20.0% |
| !!! | TTTTACCCTTAATCTTTTTT+AGG | - | chr1_4:33175046-33175065 | Msa0160520:intron | 20.0% |
| !!! | AATTTCTAAGATCTGATAAT+GGG | - | chr1_4:33177824-33177843 | Msa0160520:intron | 20.0% |
| !!! | ATTTTATTGAAGATCAACAA+TGG | - | chr1_4:33178298-33178317 | Msa0160520:intron | 20.0% |
| !!! | TTTTATTGAAGATCAACAAT+GGG | - | chr1_4:33178299-33178318 | Msa0160520:intron | 20.0% |
| !!! | TTTTTTAAATGGAGTATTAG+AGG | - | chr1_4:33178830-33178849 | Msa0160520:intron | 20.0% |
| !!! | TTTATTCAAGTTTATTAGCT+AGG | - | chr1_4:33180967-33180986 | Msa0160520:CDS | 20.0% |
| !!! | TTATTCAAGTTTATTAGCTA+GGG | - | chr1_4:33180968-33180987 | Msa0160520:CDS | 20.0% |
| !! | ATGATTATTCAACTATTTGA+TGG | - | chr1_4:33180994-33181013 | Msa0160520:CDS | 20.0% |
| !! | AAAACTTGGAAATATTTGAT+TGG | - | chr1_4:33181119-33181138 | Msa0160520:CDS | 20.0% |
| !!! | AACAATCTTTGAGAAAATTA+TGG | - | chr1_4:33181366-33181385 | Msa0160520:five_prime_UTR | 20.0% |
| ! | TCAAATTTGCATCATAAAGT+TGG | - | chr1_4:33174186-33174205 | Msa0160520:intron | 25.0% |
| !!! | GTATGATTTTTGGATTAGAA+TGG | + | chr1_4:33174227-33174246 | None:intergenic | 25.0% |
| !! | TTCTTTTGTCTCCAAAAATA+TGG | - | chr1_4:33174292-33174311 | Msa0160520:CDS | 25.0% |
| !!! | ACTATTTTACGATTGTTTCT+AGG | - | chr1_4:33174387-33174406 | Msa0160520:CDS | 25.0% |
| !!! | CTATTTTACGATTGTTTCTA+GGG | - | chr1_4:33174388-33174407 | Msa0160520:CDS | 25.0% |
| !!! | AATGCAAAGTTACCATTTTT+AGG | + | chr1_4:33174451-33174470 | None:intergenic | 25.0% |
| ! | TAAAAATGGTAACTTTGCAT+TGG | - | chr1_4:33174450-33174469 | Msa0160520:intron | 25.0% |
| ! | GAATTATAAGGGTAGTTATA+AGG | - | chr1_4:33174677-33174696 | Msa0160520:CDS | 25.0% |
| ! | AAATTGTGATCTTTGTATCT+GGG | + | chr1_4:33174729-33174748 | None:intergenic | 25.0% |
| ! | AGAAAATGTATAGTTACCAT+AGG | - | chr1_4:33174833-33174852 | Msa0160520:intron | 25.0% |
| ! | ATGAAGTGTATTATTTCCTA+TGG | + | chr1_4:33174852-33174871 | None:intergenic | 25.0% |
| ! | CGTATCCTAAAAAAGATTAA+GGG | + | chr1_4:33175054-33175073 | None:intergenic | 25.0% |
| ! | ACGTATCCTAAAAAAGATTA+AGG | + | chr1_4:33175055-33175074 | None:intergenic | 25.0% |
| !!! | TCTTTTTTAGGATACGTATA+TGG | - | chr1_4:33175058-33175077 | Msa0160520:intron | 25.0% |
| ! | TAAGTATCATTGTGTATATG+TGG | - | chr1_4:33175092-33175111 | Msa0160520:intron | 25.0% |
| ! | AAAAATCATCCATGATATGA+AGG | + | chr1_4:33175302-33175321 | None:intergenic | 25.0% |
| ! | TGCAATCATTATTTGTTTGT+TGG | + | chr1_4:33175517-33175536 | None:intergenic | 25.0% |
| ! | TAAATAGCATCAAAACAACA+TGG | - | chr1_4:33175597-33175616 | Msa0160520:intron | 25.0% |
| ! | GACCATGAAATTAGAATATT+TGG | - | chr1_4:33175653-33175672 | Msa0160520:CDS | 25.0% |
| ! | GTCCAAATATTCTAATTTCA+TGG | + | chr1_4:33175658-33175677 | None:intergenic | 25.0% |
| ! | GTTATTAATTCTTCAGCATA+CGG | + | chr1_4:33175732-33175751 | None:intergenic | 25.0% |
| !!! | TGGTGTTAATTATTTGCTTT+TGG | - | chr1_4:33175784-33175803 | Msa0160520:intron | 25.0% |
| !!! | AGTTAAAATGGAGTCTTATT+TGG | - | chr1_4:33176209-33176228 | Msa0160520:intron | 25.0% |
| ! | TGCAAACAAAGTTAGATTAT+TGG | - | chr1_4:33176566-33176585 | Msa0160520:intron | 25.0% |
| ! | GCAAACAAAGTTAGATTATT+GGG | - | chr1_4:33176567-33176586 | Msa0160520:intron | 25.0% |
| ! | CAAATTTCAAAAGTCAGAAT+TGG | - | chr1_4:33177139-33177158 | Msa0160520:intron | 25.0% |
| ! | AATTGACAAGCATTACAATT+TGG | + | chr1_4:33177556-33177575 | None:intergenic | 25.0% |
| ! | AATTGTAATGCTTGTCAATT+TGG | - | chr1_4:33177556-33177575 | Msa0160520:intron | 25.0% |
| ! | AACCATTTCCAAAAACAATT+TGG | - | chr1_4:33177593-33177612 | Msa0160520:intron | 25.0% |
| ! | ATTTGTGAAGTTCAAGAATA+TGG | - | chr1_4:33177774-33177793 | Msa0160520:intron | 25.0% |
| !!! | CAATTTCTAAGATCTGATAA+TGG | - | chr1_4:33177823-33177842 | Msa0160520:intron | 25.0% |
| !!! | AATTTATTTTGTGATGATGC+TGG | - | chr1_4:33177871-33177890 | Msa0160520:intron | 25.0% |
| !!! | AGTTTTATCTTTCAAAACCT+TGG | + | chr1_4:33178070-33178089 | None:intergenic | 25.0% |
| ! | TGATTCAAAAAAACCAAACA+TGG | - | chr1_4:33178559-33178578 | Msa0160520:intron | 25.0% |
| ! | GATTCAAAAAAACCAAACAT+GGG | - | chr1_4:33178560-33178579 | Msa0160520:intron | 25.0% |
| ! | AAAAATCATTGGAGTCAAAT+GGG | - | chr1_4:33178608-33178627 | Msa0160520:intron | 25.0% |
| ! | TGTCAAGATTAGATACAATT+AGG | - | chr1_4:33178745-33178764 | Msa0160520:intron | 25.0% |
| !!! | GTCAAATCAGCTTTTTTAAA+TGG | - | chr1_4:33178819-33178838 | Msa0160520:intron | 25.0% |
| ! | ACTCTTTATGTGAAACATAA+GGG | - | chr1_4:33179023-33179042 | Msa0160520:intron | 25.0% |
| ! | TCTGTCAAAAAAAATATGCA+AGG | - | chr1_4:33179222-33179241 | Msa0160520:intron | 25.0% |
| ! | CTGTCAAAAAAAATATGCAA+GGG | - | chr1_4:33179223-33179242 | Msa0160520:intron | 25.0% |
| ! | AATACTGACAAAATTTCAGA+TGG | - | chr1_4:33179247-33179266 | Msa0160520:intron | 25.0% |
| ! | GATACATTAAACATCCAATA+AGG | + | chr1_4:33179367-33179386 | None:intergenic | 25.0% |
| !! | GAGTGTTAATTATTTGCTTT+TGG | - | chr1_4:33180025-33180044 | Msa0160520:intron | 25.0% |
| ! | AATTACAAAGTGATACTACA+TGG | + | chr1_4:33180561-33180580 | None:intergenic | 25.0% |
| ! | ATTAATATCCGATTAGAATG+TGG | + | chr1_4:33180605-33180624 | None:intergenic | 25.0% |
| ! | ATATTAATGCCACCAAATAT+AGG | - | chr1_4:33180617-33180636 | Msa0160520:intron | 25.0% |
| ! | TAACTGATAGAAACTCAAAA+TGG | + | chr1_4:33180826-33180845 | None:intergenic | 25.0% |
| ! | TTGTGAATGAAATACTCAAT+TGG | + | chr1_4:33180877-33180896 | None:intergenic | 25.0% |
| ! | GGAGTTAATATAATTCTTTG+TGG | - | chr1_4:33181015-33181034 | Msa0160520:CDS | 25.0% |
| !!! | ATAATTCTTTGTGGTGTTAT+AGG | - | chr1_4:33181024-33181043 | Msa0160520:CDS | 25.0% |
| ! | TTGAGAAAATTATGGATTCA+AGG | - | chr1_4:33181374-33181393 | Msa0160520:five_prime_UTR | 25.0% |
| TTTGACACTGCATCAATATA+TGG | - | chr1_4:33173951-33173970 | Msa0160520:CDS | 30.0% | |
| CATGTTAAGCAACCTAAAAA+TGG | - | chr1_4:33174436-33174455 | Msa0160520:intron | 30.0% | |
| GTTCAAAACTCATAGAAACA+AGG | + | chr1_4:33174584-33174603 | None:intergenic | 30.0% | |
| !! | ACTCCATCCTTTAAAGTTAT+AGG | - | chr1_4:33174602-33174621 | Msa0160520:intron | 30.0% |
| !! | CTCCATCCTTTAAAGTTATA+GGG | - | chr1_4:33174603-33174622 | Msa0160520:intron | 30.0% |
| ! | TACCCTATAACTTTAAAGGA+TGG | + | chr1_4:33174608-33174627 | None:intergenic | 30.0% |
| TTGGGTGACATTAGTTATAA+GGG | - | chr1_4:33174632-33174651 | Msa0160520:CDS | 30.0% | |
| GAAATTGTGATCTTTGTATC+TGG | + | chr1_4:33174730-33174749 | None:intergenic | 30.0% | |
| ATACACTTCATTCTTCAGTT+TGG | - | chr1_4:33174861-33174880 | Msa0160520:intron | 30.0% | |
| TAAGATACTTCAATACTTCG+CGG | + | chr1_4:33175209-33175228 | None:intergenic | 30.0% | |
| ATAAATCACAGATCAAAGAG+AGG | - | chr1_4:33175363-33175382 | Msa0160520:intron | 30.0% | |
| TAAATCACAGATCAAAGAGA+GGG | - | chr1_4:33175364-33175383 | Msa0160520:intron | 30.0% | |
| TATGTTTAAGAGCTTGATAG+AGG | - | chr1_4:33175408-33175427 | Msa0160520:intron | 30.0% | |
| !! | TTATTTGTTTGTTGGTTCTC+TGG | + | chr1_4:33175509-33175528 | None:intergenic | 30.0% |
| ATAACCACATTTGATCTGAA+AGG | - | chr1_4:33175747-33175766 | Msa0160520:CDS | 30.0% | |
| TGTTGCATTTAGTCAATAAG+TGG | - | chr1_4:33175852-33175871 | Msa0160520:intron | 30.0% | |
| ATAAGTGGTTCCTAAACTTT+AGG | - | chr1_4:33175867-33175886 | Msa0160520:intron | 30.0% | |
| ATCACCATGAAATTAGGATA+TGG | + | chr1_4:33175914-33175933 | None:intergenic | 30.0% | |
| TCTACCATAAACCTACAAAT+TGG | - | chr1_4:33176066-33176085 | Msa0160520:intron | 30.0% | |
| GATACCAATTTGTAGGTTTA+TGG | + | chr1_4:33176073-33176092 | None:intergenic | 30.0% | |
| ATCATAGAGCTATCTTCTTA+CGG | - | chr1_4:33176090-33176109 | Msa0160520:intron | 30.0% | |
| !! | TAAAATGGAGTCTTATTTGG+AGG | - | chr1_4:33176212-33176231 | Msa0160520:intron | 30.0% |
| CAAGGAGAAAAAAACTAAGA+AGG | - | chr1_4:33176320-33176339 | Msa0160520:intron | 30.0% | |
| GAAAAAAACTAAGAAGGCTA+AGG | - | chr1_4:33176326-33176345 | Msa0160520:intron | 30.0% | |
| TATTTGAAGGAAGAATACGA+AGG | - | chr1_4:33176432-33176451 | Msa0160520:intron | 30.0% | |
| ATTTGAAGGAAGAATACGAA+GGG | - | chr1_4:33176433-33176452 | Msa0160520:intron | 30.0% | |
| AAAGTTAGATTATTGGGTAC+TGG | - | chr1_4:33176573-33176592 | Msa0160520:intron | 30.0% | |
| !!! | TTTTTCCACAATTCTGGAAT+CGG | + | chr1_4:33176604-33176623 | None:intergenic | 30.0% |
| !!! | CAGAATTTTTTCCACAATTC+TGG | + | chr1_4:33176610-33176629 | None:intergenic | 30.0% |
| CAGAATTGTGGAAAAAATTC+TGG | - | chr1_4:33176608-33176627 | Msa0160520:intron | 30.0% | |
| ! | ATCTTTTGTATTCTCCAAAG+CGG | + | chr1_4:33176667-33176686 | None:intergenic | 30.0% |
| !!! | CTGACTTTTGAAATTTGAGT+AGG | + | chr1_4:33177136-33177155 | None:intergenic | 30.0% |
| TCAAAAGTCAGAATTGGAAA+CGG | - | chr1_4:33177145-33177164 | Msa0160520:intron | 30.0% | |
| !! | AGTAGATTTTGGTCAATATC+AGG | + | chr1_4:33177256-33177275 | None:intergenic | 30.0% |
| GTAGGACAATTGATTGAAAA+AGG | - | chr1_4:33177280-33177299 | Msa0160520:intron | 30.0% | |
| ATACTAAGGGTTAACATGAA+AGG | - | chr1_4:33177361-33177380 | Msa0160520:intron | 30.0% | |
| TGAAGAAGAATGATATGACA+AGG | - | chr1_4:33177503-33177522 | Msa0160520:intron | 30.0% | |
| GAAGAAGAATGATATGACAA+GGG | - | chr1_4:33177504-33177523 | Msa0160520:intron | 30.0% | |
| AAGAAGAATGATATGACAAG+GGG | - | chr1_4:33177505-33177524 | Msa0160520:intron | 30.0% | |
| !!! | CTCCAAATTGTTTTTGGAAA+TGG | + | chr1_4:33177598-33177617 | None:intergenic | 30.0% |
| TATAGACTACCTTGTAATGA+TGG | + | chr1_4:33177676-33177695 | None:intergenic | 30.0% | |
| ! | ATGATTTTACAAGAATGTGC+TGG | - | chr1_4:33177713-33177732 | Msa0160520:intron | 30.0% |
| TAGTGAAAGGAGAAATAGAT+CGG | - | chr1_4:33177942-33177961 | Msa0160520:intron | 30.0% | |
| TATCTTTCAAAACCTTGGTT+GGG | + | chr1_4:33178065-33178084 | None:intergenic | 30.0% | |
| TTATCTTTCAAAACCTTGGT+TGG | + | chr1_4:33178066-33178085 | None:intergenic | 30.0% | |
| ! | ACTTTAAGAAAGGTTACTGA+AGG | + | chr1_4:33178120-33178139 | None:intergenic | 30.0% |
| ! | GTAACCTTTCTTAAAGTGTT+TGG | - | chr1_4:33178123-33178142 | Msa0160520:intron | 30.0% |
| ! | ACAACCAAACACTTTAAGAA+AGG | + | chr1_4:33178130-33178149 | None:intergenic | 30.0% |
| ACTTGACAAAAAAGCAATTC+CGG | - | chr1_4:33178188-33178207 | Msa0160520:intron | 30.0% | |
| AAGAATCCTCAAAGAACAAT+TGG | - | chr1_4:33178327-33178346 | Msa0160520:intron | 30.0% | |
| AAGCACTAAAAGATCCAAAA+TGG | - | chr1_4:33178508-33178527 | Msa0160520:intron | 30.0% | |
| TCCAAAATGGAAAAAAGCAA+TGG | - | chr1_4:33178521-33178540 | Msa0160520:intron | 30.0% | |
| !!! | TCCATTGCTTTTTTCCATTT+TGG | + | chr1_4:33178525-33178544 | None:intergenic | 30.0% |
| AAAATGGAAAAAAGCAATGG+AGG | - | chr1_4:33178524-33178543 | Msa0160520:intron | 30.0% | |
| GAAAAATCATTGGAGTCAAA+TGG | - | chr1_4:33178607-33178626 | Msa0160520:intron | 30.0% | |
| !! | AAAGGGTATGCACAAATTTT+TGG | - | chr1_4:33178693-33178712 | Msa0160520:intron | 30.0% |
| ATTGTATCTAATCTTGACAC+AGG | + | chr1_4:33178744-33178763 | None:intergenic | 30.0% | |
| ! | TTTAAATGGAGTATTAGAGG+AGG | - | chr1_4:33178833-33178852 | Msa0160520:intron | 30.0% |
| ATTAGAGGAGGAAATATATG+TGG | - | chr1_4:33178845-33178864 | Msa0160520:intron | 30.0% | |
| !!! | TGCTTGTTTTAAGCCATAAA+GGG | + | chr1_4:33178931-33178950 | None:intergenic | 30.0% |
| CTTATGTTTCACATAAAGAG+TGG | + | chr1_4:33179024-33179043 | None:intergenic | 30.0% | |
| CACTCTTTATGTGAAACATA+AGG | - | chr1_4:33179022-33179041 | Msa0160520:intron | 30.0% | |
| CTCTTTATGTGAAACATAAG+GGG | - | chr1_4:33179024-33179043 | Msa0160520:intron | 30.0% | |
| TAAAAGATCGTCAACATAGA+GGG | + | chr1_4:33179069-33179088 | None:intergenic | 30.0% | |
| !! | TGTTGACGATCTTTTAGTTA+CGG | - | chr1_4:33179073-33179092 | Msa0160520:intron | 30.0% |
| !!! | GTTTTTGAAATGACAGATCT+TGG | - | chr1_4:33179143-33179162 | Msa0160520:intron | 30.0% |
| GATCTCAATTCCAAGAAAAA+AGG | + | chr1_4:33179177-33179196 | None:intergenic | 30.0% | |
| !!! | AATTTCTCCTTTTGGTTCAT+TGG | + | chr1_4:33179296-33179315 | None:intergenic | 30.0% |
| !! | ATTAAAGGCACTGTTGATTA+TGG | - | chr1_4:33179494-33179513 | Msa0160520:intron | 30.0% |
| AATAGCAATTTCAAAGGATC+CGG | - | chr1_4:33179808-33179827 | Msa0160520:intron | 30.0% | |
| TTAAGAGAAATGCAGCAAAA+TGG | - | chr1_4:33179875-33179894 | Msa0160520:intron | 30.0% | |
| !! | TCAGCAAGTTTGAGTTTTTA+AGG | - | chr1_4:33179966-33179985 | Msa0160520:intron | 30.0% |
| !!! | GAGTTTTTAAGGCAGAAAAT+TGG | - | chr1_4:33179977-33179996 | Msa0160520:intron | 30.0% |
| TGTTGCATTTAGTCAATAAG+TGG | - | chr1_4:33175852-33175871 | Msa0160520:intron | 30.0% | |
| ATAAGTGGTTCCTAAACTTT+AGG | - | chr1_4:33175867-33175886 | Msa0160520:intron | 30.0% | |
| ATCACCATGAAATTAGGATA+TGG | + | chr1_4:33175914-33175933 | None:intergenic | 30.0% | |
| TTCTACCATAAACCTACAAA+TGG | - | chr1_4:33176065-33176084 | Msa0160520:intron | 30.0% | |
| TTCTTCCATTTGTAGGTTTA+TGG | + | chr1_4:33180314-33180333 | None:intergenic | 30.0% | |
| !! | TAAAATAGTTTTACAGTGCG+CGG | - | chr1_4:33180510-33180529 | Msa0160520:intron | 30.0% |
| AAAAGAATACTGTGAAGCAA+AGG | - | chr1_4:33180674-33180693 | Msa0160520:intron | 30.0% | |
| AAAGAATACTGTGAAGCAAA+GGG | - | chr1_4:33180675-33180694 | Msa0160520:intron | 30.0% | |
| TGTTATAGGTATGTCTTAGA+TGG | - | chr1_4:33181038-33181057 | Msa0160520:CDS | 30.0% | |
| CACAAACACAATAATATGCC+AGG | + | chr1_4:33173668-33173687 | None:intergenic | 35.0% | |
| AAGATTTCAGCACAACTTGA+GGG | + | chr1_4:33173815-33173834 | None:intergenic | 35.0% | |
| GTAATTGAAGCGATCAAATC+AGG | - | chr1_4:33173918-33173937 | Msa0160520:CDS | 35.0% | |
| ATCAATATATGGCTCAGAAG+AGG | - | chr1_4:33173962-33173981 | Msa0160520:CDS | 35.0% | |
| ATAGAAGAAGCTCTTCAACT+TGG | - | chr1_4:33173999-33174018 | Msa0160520:intron | 35.0% | |
| TCTTTATCACCTCCAAACTT+TGG | - | chr1_4:33174045-33174064 | Msa0160520:intron | 35.0% | |
| CTTTATCACCTCCAAACTTT+GGG | - | chr1_4:33174046-33174065 | Msa0160520:intron | 35.0% | |
| ATTGTTAGTGACCCAAAGTT+TGG | + | chr1_4:33174060-33174079 | None:intergenic | 35.0% | |
| GTGCTACCCTATAACTTTAA+AGG | + | chr1_4:33174612-33174631 | None:intergenic | 35.0% | |
| TAAAGTTATAGGGTAGCACT+TGG | - | chr1_4:33174613-33174632 | Msa0160520:intron | 35.0% | |
| AAAGTTATAGGGTAGCACTT+GGG | - | chr1_4:33174614-33174633 | Msa0160520:intron | 35.0% | |
| CTTGGGTGACATTAGTTATA+AGG | - | chr1_4:33174631-33174650 | Msa0160520:CDS | 35.0% | |
| TAAGTAGCTACAAGTATCCA+CGG | - | chr1_4:33175229-33175248 | Msa0160520:intron | 35.0% | |
| TATCATATACTGATACTCCG+TGG | + | chr1_4:33175249-33175268 | None:intergenic | 35.0% | |
| ! | CGGAGTATCAGTATATGATA+CGG | - | chr1_4:33175249-33175268 | Msa0160520:intron | 35.0% |
| ! | AGTATCTAGCCTTCATATCA+TGG | - | chr1_4:33175290-33175309 | Msa0160520:intron | 35.0% |
| TCAAAACAACATGGAGCATA+AGG | - | chr1_4:33175606-33175625 | Msa0160520:intron | 35.0% | |
| TGAAATTGATGCCATATTGC+AGG | - | chr1_4:33175631-33175650 | Msa0160520:intron | 35.0% | |
| AATTTCATGGTCCTGCAATA+TGG | + | chr1_4:33175645-33175664 | None:intergenic | 35.0% | |
| TCCACCATATCCTAATTTCA+TGG | - | chr1_4:33175907-33175926 | Msa0160520:intron | 35.0% | |
| ACCATGAAATTAGGATATGG+TGG | + | chr1_4:33175911-33175930 | None:intergenic | 35.0% | |
| ! | ATCCTAATTTCATGGTGATG+TGG | - | chr1_4:33175915-33175934 | Msa0160520:intron | 35.0% |
| TACCACATCACCATGAAATT+AGG | + | chr1_4:33175920-33175939 | None:intergenic | 35.0% | |
| GAAGCAAGAAATACGTTGAA+AGG | + | chr1_4:33176032-33176051 | None:intergenic | 35.0% | |
| GCTCTATGATACCAATTTGT+AGG | + | chr1_4:33176080-33176099 | None:intergenic | 35.0% | |
| TCATAGAGCTATCTTCTTAC+GGG | - | chr1_4:33176091-33176110 | Msa0160520:intron | 35.0% | |
| TAGTTGTCTCCATCGAAAAT+GGG | + | chr1_4:33176177-33176196 | None:intergenic | 35.0% | |
| ATAGTTGTCTCCATCGAAAA+TGG | + | chr1_4:33176178-33176197 | None:intergenic | 35.0% | |
| ATGGAGACAACTATGATCTT+TGG | - | chr1_4:33176184-33176203 | Msa0160520:intron | 35.0% | |
| TGGAGACAACTATGATCTTT+GGG | - | chr1_4:33176185-33176204 | Msa0160520:intron | 35.0% | |
| TGATCTTTGGGCAGTTAAAA+TGG | - | chr1_4:33176197-33176216 | Msa0160520:intron | 35.0% | |
| !!! | TGTTTTGAGAGTCATGATTC+TGG | + | chr1_4:33176394-33176413 | None:intergenic | 35.0% |
| TTTGAAGGAAGAATACGAAG+GGG | - | chr1_4:33176434-33176453 | Msa0160520:intron | 35.0% | |
| ATTGATGCTTCATATCTCTC+TGG | + | chr1_4:33176642-33176661 | None:intergenic | 35.0% | |
| ! | TTTTACCTCTGTCTTTGCTT+TGG | + | chr1_4:33176824-33176843 | None:intergenic | 35.0% |
| !! | TTCATCTGGTTCTACAACTT+GGG | + | chr1_4:33177000-33177019 | None:intergenic | 35.0% |
| !! | TTTCATCTGGTTCTACAACT+TGG | + | chr1_4:33177001-33177020 | None:intergenic | 35.0% |
| AACCAGATGAAAGATGTTTG+TGG | - | chr1_4:33177009-33177028 | Msa0160520:intron | 35.0% | |
| TATATAGCCGCAAAAGGAAA+GGG | - | chr1_4:33177172-33177191 | Msa0160520:intron | 35.0% | |
| TAAAAGCTTCTCGTTTGATC+CGG | - | chr1_4:33177384-33177403 | Msa0160520:intron | 35.0% | |
| ! | GGCAAATGATCAGAAAGTAT+CGG | + | chr1_4:33177535-33177554 | None:intergenic | 35.0% |
| ! | TGTAATGATGGTGTTCTTTG+AGG | + | chr1_4:33177664-33177683 | None:intergenic | 35.0% |
| CAAAGAACACCATCATTACA+AGG | - | chr1_4:33177664-33177683 | Msa0160520:intron | 35.0% | |
| CTTGAAATTCAAGCATGAAG+TGG | - | chr1_4:33177744-33177763 | Msa0160520:intron | 35.0% | |
| TGTGAAGTTCAAGAATATGG+TGG | - | chr1_4:33177777-33177796 | Msa0160520:intron | 35.0% | |
| ! | AATATGGTGGAAACTCAAAG+TGG | - | chr1_4:33177790-33177809 | Msa0160520:intron | 35.0% |
| !! | TCTAAGATCTGATAATGGGA+AGG | - | chr1_4:33177828-33177847 | Msa0160520:intron | 35.0% |
| AACAGAATGGAGTTAGTGAA+AGG | - | chr1_4:33177929-33177948 | Msa0160520:intron | 35.0% | |
| TAGATGCATGTTGCATGAAA+AGG | - | chr1_4:33177978-33177997 | Msa0160520:intron | 35.0% | |
| GAAAGATAAAACTCCGTTTG+AGG | - | chr1_4:33178077-33178096 | Msa0160520:intron | 35.0% | |
| CTTGACAAAAAAGCAATTCC+GGG | - | chr1_4:33178189-33178208 | Msa0160520:intron | 35.0% | |
| TTGAGGATGATACACTTTGT+AGG | + | chr1_4:33178247-33178266 | None:intergenic | 35.0% | |
| AAAGTGTATCATCCTCAAAG+TGG | - | chr1_4:33178249-33178268 | Msa0160520:intron | 35.0% | |
| ACAGATCCAATTGTTCTTTG+AGG | + | chr1_4:33178336-33178355 | None:intergenic | 35.0% | |
| TGAAGATGATCATCTCAGAA+AGG | - | chr1_4:33178365-33178384 | Msa0160520:intron | 35.0% | |
| ! | CCAATGATTTTTCTATCTCC+AGG | + | chr1_4:33178600-33178619 | None:intergenic | 35.0% |
| CCTGGAGATAGAAAAATCAT+TGG | - | chr1_4:33178597-33178616 | Msa0160520:intron | 35.0% | |
| ATACCCTTTAACTACAAGTC+TGG | + | chr1_4:33178682-33178701 | None:intergenic | 35.0% | |
| CTACTCAAAAAAGCCCTTTA+TGG | - | chr1_4:33178915-33178934 | Msa0160520:intron | 35.0% | |
| !!! | GTGCTTGTTTTAAGCCATAA+AGG | + | chr1_4:33178932-33178951 | None:intergenic | 35.0% |
| AATGATCACCTATTGAGCAT+AGG | - | chr1_4:33178975-33178994 | Msa0160520:intron | 35.0% | |
| ! | TTTCACATAAAGAGTGGACT+CGG | + | chr1_4:33179018-33179037 | None:intergenic | 35.0% |
| CTAAAAGATCGTCAACATAG+AGG | + | chr1_4:33179070-33179089 | None:intergenic | 35.0% | |
| !! | GTTGACGATCTTTTAGTTAC+GGG | - | chr1_4:33179074-33179093 | Msa0160520:intron | 35.0% |
| ACTGACAAAATTTCAGATGG+AGG | - | chr1_4:33179250-33179269 | Msa0160520:intron | 35.0% | |
| ! | GGATATTACAGAAGCCTTAT+TGG | - | chr1_4:33179350-33179369 | Msa0160520:CDS | 35.0% |
| TAATGTATCTTACTGCAACG+AGG | - | chr1_4:33179378-33179397 | Msa0160520:CDS | 35.0% | |
| TAGTGAAATGCACTTGAAAG+CGG | - | chr1_4:33179451-33179470 | Msa0160520:intron | 35.0% | |
| !! | TGTCAAAAGTTCAAGTTGTG+TGG | - | chr1_4:33179533-33179552 | Msa0160520:intron | 35.0% |
| AGTACTCTTCATGTCATCAA+TGG | + | chr1_4:33179585-33179604 | None:intergenic | 35.0% | |
| ATGAAAAAACACCTGATCCT+AGG | + | chr1_4:33179625-33179644 | None:intergenic | 35.0% | |
| !!! | TAGGATCAGGTGTTTTTTCA+TGG | - | chr1_4:33179624-33179643 | Msa0160520:intron | 35.0% |
| TATAAATTCAGCTTCTGCAG+TGG | + | chr1_4:33179681-33179700 | None:intergenic | 35.0% | |
| ! | CAGCTGTAAATCAAGTTTTG+TGG | - | chr1_4:33179711-33179730 | Msa0160520:intron | 35.0% |
| CCTCTATCTTATGATTCTGT+TGG | + | chr1_4:33179766-33179785 | None:intergenic | 35.0% | |
| CCAACAGAATCATAAGATAG+AGG | - | chr1_4:33179763-33179782 | Msa0160520:intron | 35.0% | |
| ! | TTTGGTTTATTGCAAGTCAG+AGG | - | chr1_4:33179907-33179926 | Msa0160520:intron | 35.0% |
| !! | AAAAACTCAAACTTGCTGAC+AGG | + | chr1_4:33179965-33179984 | None:intergenic | 35.0% |
| TCCACCATATCCTAATTTCA+TGG | - | chr1_4:33175907-33175926 | Msa0160520:intron | 35.0% | |
| ACCATGAAATTAGGATATGG+TGG | + | chr1_4:33175911-33175930 | None:intergenic | 35.0% | |
| ! | ATCCTAATTTCATGGTGATG+TGG | - | chr1_4:33175915-33175934 | Msa0160520:intron | 35.0% |
| TACCACATCACCATGAAATT+AGG | + | chr1_4:33175920-33175939 | None:intergenic | 35.0% | |
| GAAGCAAGAAATACGTTGAA+AGG | + | chr1_4:33176032-33176051 | None:intergenic | 35.0% | |
| ATGGAAGAATGCCAGAAATT+AGG | - | chr1_4:33180325-33180344 | Msa0160520:intron | 35.0% | |
| ! | ATTTTGCAAGGCCTAATTTC+TGG | + | chr1_4:33180339-33180358 | None:intergenic | 35.0% |
| TTAGGCCTTGCAAAATCTAT+AGG | - | chr1_4:33180343-33180362 | Msa0160520:intron | 35.0% | |
| ! | TGACTCCTATAGATTTTGCA+AGG | + | chr1_4:33180351-33180370 | None:intergenic | 35.0% |
| !! | ATTTGCTATCATTCCTCCTT+CGG | - | chr1_4:33180408-33180427 | Msa0160520:intron | 35.0% |
| AGTGACATAGATGAGCTTAT+TGG | + | chr1_4:33180447-33180466 | None:intergenic | 35.0% | |
| ACAAGACTAGTGAAAGAGAA+AGG | + | chr1_4:33180475-33180494 | None:intergenic | 35.0% | |
| !! | CTAGTCTTGTAGTTTAACGT+CGG | - | chr1_4:33180485-33180504 | Msa0160520:intron | 35.0% |
| TTAATGCCACCAAATATAGG+TGG | - | chr1_4:33180620-33180639 | Msa0160520:intron | 35.0% | |
| GATTCATCTCCACCTATATT+TGG | + | chr1_4:33180632-33180651 | None:intergenic | 35.0% | |
| TTGGGGTAGTAATGAAGTTA+TGG | - | chr1_4:33180743-33180762 | Msa0160520:intron | 35.0% | |
| AATACTCAAGCAAATTGCAG+AGG | - | chr1_4:33180773-33180792 | Msa0160520:intron | 35.0% | |
| ACATGGCAAAAATATTGCTC+AGG | - | chr1_4:33180797-33180816 | Msa0160520:intron | 35.0% | |
| TTAGATGGTTGTATGAGCAA+GGG | - | chr1_4:33181053-33181072 | Msa0160520:CDS | 35.0% | |
| AAACAGATTCGTGTCAACAA+TGG | - | chr1_4:33181181-33181200 | Msa0160520:CDS | 35.0% | |
| AACAGATTCGTGTCAACAAT+GGG | - | chr1_4:33181182-33181201 | Msa0160520:CDS | 35.0% | |
| TTGTGTTCATTCCTAACCTT+TGG | - | chr1_4:33181209-33181228 | Msa0160520:CDS | 35.0% | |
| TGTGTTCATTCCTAACCTTT+GGG | - | chr1_4:33181210-33181229 | Msa0160520:CDS | 35.0% | |
| GGAAACTTAAGCCCAATATT+AGG | - | chr1_4:33181237-33181256 | Msa0160520:CDS | 35.0% | |
| !! | AGTGGACTGAACCTAATATT+GGG | + | chr1_4:33181251-33181270 | None:intergenic | 35.0% |
| !! | TAGTGGACTGAACCTAATAT+TGG | + | chr1_4:33181252-33181271 | None:intergenic | 35.0% |
| ATCATCACTTTAGCGTGAAT+AGG | - | chr1_4:33181271-33181290 | Msa0160520:five_prime_UTR | 35.0% | |
| ! | TTCTCTATGTGCTTTTCGTA+TGG | - | chr1_4:33181311-33181330 | Msa0160520:five_prime_UTR | 35.0% |
| ! | AAGAAAATGATGGGACATGG+AGG | + | chr1_4:33173701-33173720 | None:intergenic | 40.0% |
| ! | AGCAAGAAAATGATGGGACA+TGG | + | chr1_4:33173704-33173723 | None:intergenic | 40.0% |
| GAAGATTTCAGCACAACTTG+AGG | + | chr1_4:33173816-33173835 | None:intergenic | 40.0% | |
| CTATCACTGGCATGTTACAT+TGG | + | chr1_4:33173845-33173864 | None:intergenic | 40.0% | |
| AACATGCCAGTGATAGCATT+TGG | - | chr1_4:33173849-33173868 | Msa0160520:CDS | 40.0% | |
| GCTCTTCAACTTGGTCTAAT+TGG | - | chr1_4:33174008-33174027 | Msa0160520:intron | 40.0% | |
| ! | GAGGTAAGACTTTTGCTTAC+TGG | + | chr1_4:33174121-33174140 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr1_4:33174411-33174430 | Msa0160520:intron | 40.0% |
| GTTGCTTAACATGTGCCTTA+GGG | + | chr1_4:33174429-33174448 | None:intergenic | 40.0% | |
| !! | ATGTTAACTTGTGCCCTCAA+GGG | + | chr1_4:33174558-33174577 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr1_4:33174559-33174578 | None:intergenic | 40.0% |
| AAGGCTAGATACTCCAAACT+TGG | + | chr1_4:33175283-33175302 | None:intergenic | 40.0% | |
| !! | TTGTTTGTTGGTTCTCTGGT+AGG | + | chr1_4:33175505-33175524 | None:intergenic | 40.0% |
| ! | TGGACCTTTATTTGATCCAC+TGG | - | chr1_4:33175673-33175692 | Msa0160520:CDS | 40.0% |
| TTGGCCAGTGGATCAAATAA+AGG | + | chr1_4:33175680-33175699 | None:intergenic | 40.0% | |
| CACTCCTTTCAGATCAAATG+TGG | + | chr1_4:33175754-33175773 | None:intergenic | 40.0% | |
| CATTTGATCTGAAAGGAGTG+TGG | - | chr1_4:33175754-33175773 | Msa0160520:CDS | 40.0% | |
| CCTACTTGCTCCTAAAGTTT+AGG | + | chr1_4:33175880-33175899 | None:intergenic | 40.0% | |
| ! | CCTAAACTTTAGGAGCAAGT+AGG | - | chr1_4:33175877-33175896 | Msa0160520:intron | 40.0% |
| GGTAACACTGAGATGGAATA+GGG | + | chr1_4:33176011-33176030 | None:intergenic | 40.0% | |
| AGGTAACACTGAGATGGAAT+AGG | + | chr1_4:33176012-33176031 | None:intergenic | 40.0% | |
| GTTGAAAGGTAACACTGAGA+TGG | + | chr1_4:33176018-33176037 | None:intergenic | 40.0% | |
| TTCACCTTCCATGTTTACCA+AGG | + | chr1_4:33176118-33176137 | None:intergenic | 40.0% | |
| !! | ATTTGGAGGCTTTGGATCTT+TGG | - | chr1_4:33176226-33176245 | Msa0160520:intron | 40.0% |
| !! | TTTGGAGGCTTTGGATCTTT+GGG | - | chr1_4:33176227-33176246 | Msa0160520:intron | 40.0% |
| AACCTCATAATCCTCTTCCA+CGG | + | chr1_4:33176256-33176275 | None:intergenic | 40.0% | |
| GCAAAATCATGTCTCTTTGC+TGG | - | chr1_4:33176348-33176367 | Msa0160520:intron | 40.0% | |
| TCAAAACACCAAAAGCCATC+TGG | - | chr1_4:33176406-33176425 | Msa0160520:intron | 40.0% | |
| CAAAACACCAAAAGCCATCT+GGG | - | chr1_4:33176407-33176426 | Msa0160520:intron | 40.0% | |
| ! | AAATAGTCCCAGATGGCTTT+TGG | + | chr1_4:33176417-33176436 | None:intergenic | 40.0% |
| TTCCTTCAAATAGTCCCAGA+TGG | + | chr1_4:33176424-33176443 | None:intergenic | 40.0% | |
| ! | TGCAAGTGCTTAACTTGATG+AGG | - | chr1_4:33176475-33176494 | Msa0160520:intron | 40.0% |
| ! | GCAAGTGCTTAACTTGATGA+GGG | - | chr1_4:33176476-33176495 | Msa0160520:intron | 40.0% |
| ! | TGAAGCATCAATAACCGCTT+TGG | - | chr1_4:33176650-33176669 | Msa0160520:intron | 40.0% |
| CTGTCCAAAATCACTTTAGC+AGG | - | chr1_4:33176687-33176706 | Msa0160520:intron | 40.0% | |
| ! | CACTCCTGCTAAAGTGATTT+TGG | + | chr1_4:33176694-33176713 | None:intergenic | 40.0% |
| GCTTATGAGACAAGATCATG+TGG | - | chr1_4:33176746-33176765 | Msa0160520:intron | 40.0% | |
| AGACAAGATCATGTGGTTGA+AGG | - | chr1_4:33176753-33176772 | Msa0160520:intron | 40.0% | |
| ACTTCCAACTTCATGATGCT+TGG | + | chr1_4:33176790-33176809 | None:intergenic | 40.0% | |
| ! | ATTTTGCTACAGTGCTCACA+GGG | + | chr1_4:33176861-33176880 | None:intergenic | 40.0% |
| ! | TGTGAGCACTGTAGCAAAAT+GGG | - | chr1_4:33176861-33176880 | Msa0160520:intron | 40.0% |
| AGCCACAAACATCTTTCATC+TGG | + | chr1_4:33177014-33177033 | None:intergenic | 40.0% | |
| CCAACATTCTGAACTACTTC+TGG | + | chr1_4:33177050-33177069 | None:intergenic | 40.0% | |
| CCAGAAGTAGTTCAGAATGT+TGG | - | chr1_4:33177047-33177066 | Msa0160520:intron | 40.0% | |
| GAGTTCTATCATACGTCATG+TGG | + | chr1_4:33177096-33177115 | None:intergenic | 40.0% | |
| CTATATAGCCGCAAAAGGAA+AGG | - | chr1_4:33177171-33177190 | Msa0160520:intron | 40.0% | |
| GTCGTAATTTCAACGAGTTC+AGG | - | chr1_4:33177199-33177218 | Msa0160520:intron | 40.0% | |
| GACCAAAATCTACTCAGTGT+AGG | - | chr1_4:33177262-33177281 | Msa0160520:intron | 40.0% | |
| ! | GTCCTACACTGAGTAGATTT+TGG | + | chr1_4:33177267-33177286 | None:intergenic | 40.0% |
| TGTATCATCTTTGACACCAC+TGG | - | chr1_4:33177331-33177350 | Msa0160520:intron | 40.0% | |
| AAGTCGCTTATGCCAAAGTT+CGG | + | chr1_4:33177452-33177471 | None:intergenic | 40.0% | |
| ! | GAGGCTCTCCAAATTGTTTT+TGG | + | chr1_4:33177604-33177623 | None:intergenic | 40.0% |
| ! | AATGAGTTGCAGCTTTTGAG+AGG | + | chr1_4:33177623-33177642 | None:intergenic | 40.0% |
| AAATTCAAGCATGAAGTGGC+TGG | - | chr1_4:33177748-33177767 | Msa0160520:intron | 40.0% | |
| TCACTAACTCCATTCTGTTG+TGG | + | chr1_4:33177928-33177947 | None:intergenic | 40.0% | |
| AAGGAGAAATAGATCGGTGA+TGG | - | chr1_4:33177948-33177967 | Msa0160520:intron | 40.0% | |
| !! | AAATAGATCGGTGATGGAGA+TGG | - | chr1_4:33177954-33177973 | Msa0160520:intron | 40.0% |
| ! | AGGACTTGCCAAAACCATTT+TGG | - | chr1_4:33177998-33178017 | Msa0160520:intron | 40.0% |
| ! | GGACTTGCCAAAACCATTTT+GGG | - | chr1_4:33177999-33178018 | Msa0160520:intron | 40.0% |
| ! | AAAACCATTTTGGGCAGAAG+CGG | - | chr1_4:33178008-33178027 | Msa0160520:intron | 40.0% |
| ! | ATAAAACTCCGTTTGAGGCT+TGG | - | chr1_4:33178082-33178101 | Msa0160520:intron | 40.0% |
| ! | AGTTTGTCACGCTTAACTTG+TGG | + | chr1_4:33178171-33178190 | None:intergenic | 40.0% |
| ACAGTCATCTTTCCACTTTG+AGG | + | chr1_4:33178264-33178283 | None:intergenic | 40.0% | |
| TTGAAGATCAACAATGGGAC+TGG | - | chr1_4:33178304-33178323 | Msa0160520:intron | 40.0% | |
| ATGGAAAAAAGCAATGGAGG+AGG | - | chr1_4:33178527-33178546 | Msa0160520:intron | 40.0% | |
| TGTCAACTAGTTCCCATGTT+TGG | + | chr1_4:33178575-33178594 | None:intergenic | 40.0% | |
| AAGGCCAGACTTGTAGTTAA+AGG | - | chr1_4:33178675-33178694 | Msa0160520:intron | 40.0% | |
| AGGCCAGACTTGTAGTTAAA+GGG | - | chr1_4:33178676-33178695 | Msa0160520:intron | 40.0% | |
| ATGGCTTAAAACAAGCACCA+AGG | - | chr1_4:33178934-33178953 | Msa0160520:intron | 40.0% | |
| TGGCTTAAAACAAGCACCAA+GGG | - | chr1_4:33178935-33178954 | Msa0160520:intron | 40.0% | |
| TCACAAAGCCTATGCTCAAT+AGG | + | chr1_4:33178986-33179005 | None:intergenic | 40.0% | |
| !!! | GGCTTGATGACCTTTTTTCT+TGG | - | chr1_4:33179164-33179183 | Msa0160520:intron | 40.0% |
| TAGCACACCAATGAACCAAA+AGG | - | chr1_4:33179286-33179305 | Msa0160520:CDS | 40.0% | |
| ! | CCTTGCTCAATTTCTCCTTT+TGG | + | chr1_4:33179304-33179323 | None:intergenic | 40.0% |
| CCAAAAGGAGAAATTGAGCA+AGG | - | chr1_4:33179301-33179320 | Msa0160520:CDS | 40.0% | |
| GAGAAATTGAGCAAGGAAGA+TGG | - | chr1_4:33179308-33179327 | Msa0160520:CDS | 40.0% | |
| ! | GGTGCTGAGAAAATTGATGA+AGG | - | chr1_4:33179329-33179348 | Msa0160520:CDS | 40.0% |
| CTTACAGCGAATAGAATGTC+TGG | + | chr1_4:33179404-33179423 | None:intergenic | 40.0% | |
| ! | TGGATTCTCTGATAGTGACT+GGG | - | chr1_4:33179553-33179572 | Msa0160520:intron | 40.0% |
| !! | GATGACATGAAGAGTACTTC+TGG | - | chr1_4:33179587-33179606 | Msa0160520:intron | 40.0% |
| TCTGGATATTGTTTCAGCCT+AGG | - | chr1_4:33179605-33179624 | Msa0160520:intron | 40.0% | |
| TATTGTTTCAGCCTAGGATC+AGG | - | chr1_4:33179611-33179630 | Msa0160520:intron | 40.0% | |
| ! | AGAGGTTTTTATCGACAACC+AGG | - | chr1_4:33179781-33179800 | Msa0160520:intron | 40.0% |
| ! | TTGAAATTGCTATTGCTGCC+TGG | + | chr1_4:33179802-33179821 | None:intergenic | 40.0% |
| GGCAGCAATAGCAATTTCAA+AGG | - | chr1_4:33179802-33179821 | Msa0160520:intron | 40.0% | |
| ! | TTAGTCTTCCCATGACATAC+CGG | + | chr1_4:33179830-33179849 | None:intergenic | 40.0% |
| GCAAAATGGAGAAGTCACTT+TGG | - | chr1_4:33179889-33179908 | Msa0160520:intron | 40.0% | |
| TTGCAAGTCAGAGGATCAAT+TGG | - | chr1_4:33179916-33179935 | Msa0160520:intron | 40.0% | |
| AGTTTGCAGATCCTAAAGCA+AGG | - | chr1_4:33180000-33180019 | Msa0160520:intron | 40.0% | |
| TTAACACTCCTCCTTGCTTT+AGG | + | chr1_4:33180014-33180033 | None:intergenic | 40.0% | |
| CCTACTTGCTCCTAAAGTTT+AGG | + | chr1_4:33175880-33175899 | None:intergenic | 40.0% | |
| ! | CCTAAACTTTAGGAGCAAGT+AGG | - | chr1_4:33175877-33175896 | Msa0160520:intron | 40.0% |
| GGTAACACTGAGATGGAATA+GGG | + | chr1_4:33176011-33176030 | None:intergenic | 40.0% | |
| AGGTAACACTGAGATGGAAT+AGG | + | chr1_4:33176012-33176031 | None:intergenic | 40.0% | |
| GTTGAAAGGTAACACTGAGA+TGG | + | chr1_4:33176018-33176037 | None:intergenic | 40.0% | |
| TCTGGCATTCTTCCATTTGT+AGG | + | chr1_4:33180321-33180340 | None:intergenic | 40.0% | |
| GCAACATGCCACATTCTAAT+CGG | - | chr1_4:33180594-33180613 | Msa0160520:intron | 40.0% | |
| TCATCTCCACCTATATTTGG+TGG | + | chr1_4:33180629-33180648 | None:intergenic | 40.0% | |
| ATAACCGCTTTCTCTCCTTT+AGG | - | chr1_4:33180705-33180724 | Msa0160520:intron | 40.0% | |
| AACTTCATTACTACCCCAAC+TGG | + | chr1_4:33180742-33180761 | None:intergenic | 40.0% | |
| AAGCAAATTGCAGAGGAACA+TGG | - | chr1_4:33180780-33180799 | Msa0160520:intron | 40.0% | |
| CTTAGATGGTTGTATGAGCA+AGG | - | chr1_4:33181052-33181071 | Msa0160520:CDS | 40.0% | |
| TAGATGGTTGTATGAGCAAG+GGG | - | chr1_4:33181054-33181073 | Msa0160520:CDS | 40.0% | |
| GGAGAGAATGAAGCAAAACT+TGG | - | chr1_4:33181105-33181124 | Msa0160520:CDS | 40.0% | |
| AGGTTAGGAATGAACACAAC+TGG | + | chr1_4:33181208-33181227 | None:intergenic | 40.0% | |
| ! | TTCATTCCTAACCTTTGGGA+TGG | - | chr1_4:33181214-33181233 | Msa0160520:CDS | 40.0% |
| !! | TCATTCCTAACCTTTGGGAT+GGG | - | chr1_4:33181215-33181234 | Msa0160520:CDS | 40.0% |
| TCACGCTAAAGTGATGATAG+TGG | + | chr1_4:33181269-33181288 | None:intergenic | 40.0% | |
| GCGTGAATAGGACAAAACTT+AGG | - | chr1_4:33181283-33181302 | Msa0160520:five_prime_UTR | 40.0% | |
| CACTGGCATGTTACATTGGT+TGG | + | chr1_4:33173841-33173860 | None:intergenic | 45.0% | |
| GCCAGTGATAGCATTTGGTA+CGG | - | chr1_4:33173854-33173873 | Msa0160520:CDS | 45.0% | |
| GCAGCTGTAACAAACAACGA+TGG | - | chr1_4:33173876-33173895 | Msa0160520:CDS | 45.0% | |
| TATGGCTCAGAAGAGGCTTT+AGG | - | chr1_4:33173969-33173988 | Msa0160520:CDS | 45.0% | |
| GTTAGTGACCCAAAGTTTGG+AGG | + | chr1_4:33174057-33174076 | None:intergenic | 45.0% | |
| AGAGCAGGAAGAACAAGATG+AGG | + | chr1_4:33174086-33174105 | None:intergenic | 45.0% | |
| ! | TGGAGTGATTTCTGAAGAGC+AGG | + | chr1_4:33174101-33174120 | None:intergenic | 45.0% |
| GGTTGCTTAACATGTGCCTT+AGG | + | chr1_4:33174430-33174449 | None:intergenic | 45.0% | |
| TTCCTTAACATGTGCCCTTG+AGG | - | chr1_4:33174541-33174560 | Msa0160520:intron | 45.0% | |
| TCCTTAACATGTGCCCTTGA+GGG | - | chr1_4:33174542-33174561 | Msa0160520:intron | 45.0% | |
| TACGGATACGTCTCCAAGTT+TGG | - | chr1_4:33175267-33175286 | Msa0160520:intron | 45.0% | |
| TACGGCAATTCCCAATTTCC+CGG | + | chr1_4:33175714-33175733 | None:intergenic | 45.0% | |
| !! | ATTTGCTTTTGGACTGCACG+TGG | - | chr1_4:33175795-33175814 | Msa0160520:intron | 45.0% |
| TTACGGGACCTTGGTAAACA+TGG | - | chr1_4:33176107-33176126 | Msa0160520:intron | 45.0% | |
| ! | ATTGCTCCTCCCATTTTCGA+TGG | - | chr1_4:33176165-33176184 | Msa0160520:intron | 45.0% |
| TTGTCTCCATCGAAAATGGG+AGG | + | chr1_4:33176174-33176193 | None:intergenic | 45.0% | |
| !! | GGAGTCTTATTTGGAGGCTT+TGG | - | chr1_4:33176218-33176237 | Msa0160520:intron | 45.0% |
| ATGGTAGGATTATTCGGCAG+CGG | + | chr1_4:33176282-33176301 | None:intergenic | 45.0% | |
| TGGGCCATGGTAGGATTATT+CGG | + | chr1_4:33176288-33176307 | None:intergenic | 45.0% | |
| CTCCTTGTGAAGTCTCATCT+GGG | + | chr1_4:33176307-33176326 | None:intergenic | 45.0% | |
| TCTCCTTGTGAAGTCTCATC+TGG | + | chr1_4:33176308-33176327 | None:intergenic | 45.0% | |
| ! | AGCCATCTGGGACTATTTGA+AGG | - | chr1_4:33176419-33176438 | Msa0160520:intron | 45.0% |
| AAGAATACGAAGGGGATGAG+AGG | - | chr1_4:33176442-33176461 | Msa0160520:intron | 45.0% | |
| !! | ATTCGCCGATTCCAGAATTG+TGG | - | chr1_4:33176596-33176615 | Msa0160520:intron | 45.0% |
| CAAGCCAAGCATCATGAAGT+TGG | - | chr1_4:33176783-33176802 | Msa0160520:intron | 45.0% | |
| AACAGCCAAAGCAAAGACAG+AGG | - | chr1_4:33176816-33176835 | Msa0160520:intron | 45.0% | |
| ! | CATTTTGCTACAGTGCTCAC+AGG | + | chr1_4:33176862-33176881 | None:intergenic | 45.0% |
| ! | CTGTGAGCACTGTAGCAAAA+TGG | - | chr1_4:33176860-33176879 | Msa0160520:intron | 45.0% |
| TTCTCCAACATCTGAACGGT+GGG | + | chr1_4:33176890-33176909 | None:intergenic | 45.0% | |
| GGTCTTCTCCAACATCTGAA+CGG | + | chr1_4:33176894-33176913 | None:intergenic | 45.0% | |
| GTTCAGATGTTGGAGAAGAC+CGG | - | chr1_4:33176893-33176912 | Msa0160520:intron | 45.0% | |
| ! | GAATGTTGGCTGATTGACAG+TGG | - | chr1_4:33177061-33177080 | Msa0160520:intron | 45.0% |
| GGTGTCTATATAGCCGCAAA+AGG | - | chr1_4:33177166-33177185 | Msa0160520:intron | 45.0% | |
| ! | GACAGTTCCCTTTCCTTTTG+CGG | + | chr1_4:33177182-33177201 | None:intergenic | 45.0% |
| CACTGGTCGAGAGATACTAA+GGG | - | chr1_4:33177348-33177367 | Msa0160520:intron | 45.0% | |
| GAACTTTGGCATAAGCGACT+TGG | - | chr1_4:33177451-33177470 | Msa0160520:intron | 45.0% | |
| CCATTCTGTTGTGGAGTGTA+TGG | + | chr1_4:33177919-33177938 | None:intergenic | 45.0% | |
| CCATACACTCCACAACAGAA+TGG | - | chr1_4:33177916-33177935 | Msa0160520:intron | 45.0% | |
| ! | GCTTCTGCCCAAAATGGTTT+TGG | + | chr1_4:33178009-33178028 | None:intergenic | 45.0% |
| ! | TCAAAATCGACTCCCAACCA+AGG | - | chr1_4:33178050-33178069 | Msa0160520:intron | 45.0% |
| TACCCATACCAAGCCTCAAA+CGG | + | chr1_4:33178093-33178112 | None:intergenic | 45.0% | |
| CTATATCCCACAAAGATGCC+CGG | + | chr1_4:33178210-33178229 | None:intergenic | 45.0% | |
| GAAGATGATCCTCCCATTAG+AGG | - | chr1_4:33178417-33178436 | Msa0160520:intron | 45.0% | |
| !! | ATGTGAACCTGCTTGTTGTG+AGG | - | chr1_4:33178485-33178504 | Msa0160520:intron | 45.0% |
| ATTAGCAGTCGCTGCTCAAA+AGG | - | chr1_4:33178773-33178792 | Msa0160520:intron | 45.0% | |
| TTAGCAGTCGCTGCTCAAAA+GGG | - | chr1_4:33178774-33178793 | Msa0160520:intron | 45.0% | |
| AATATATGTGGAGCAGCCAG+AGG | - | chr1_4:33178857-33178876 | Msa0160520:intron | 45.0% | |
| ATATATGTGGAGCAGCCAGA+GGG | - | chr1_4:33178858-33178877 | Msa0160520:intron | 45.0% | |
| TAAAACAAGCACCAAGGGCT+TGG | - | chr1_4:33178940-33178959 | Msa0160520:intron | 45.0% | |
| ! | GTGGATTCTCTGATAGTGAC+TGG | - | chr1_4:33179552-33179571 | Msa0160520:intron | 45.0% |
| TTCATGGTCCACAAAGAAGC+AGG | - | chr1_4:33179640-33179659 | Msa0160520:intron | 45.0% | |
| TACTGTCTCCTGCTTCTTTG+TGG | + | chr1_4:33179651-33179670 | None:intergenic | 45.0% | |
| TCAAAGGATCCGGTATGTCA+TGG | - | chr1_4:33179818-33179837 | Msa0160520:intron | 45.0% | |
| CAAAGGATCCGGTATGTCAT+GGG | - | chr1_4:33179819-33179838 | Msa0160520:intron | 45.0% | |
| !! | TCAAACTTGCTGACAGGAAG+TGG | + | chr1_4:33179959-33179978 | None:intergenic | 45.0% |
| TTGCAGATCCTAAAGCAAGG+AGG | - | chr1_4:33180003-33180022 | Msa0160520:intron | 45.0% | |
| !! | ATTTGCTTTTGGACTGCACG+TGG | - | chr1_4:33175795-33175814 | Msa0160520:intron | 45.0% |
| CTTACTTGATTGACCGAAGG+AGG | + | chr1_4:33180424-33180443 | None:intergenic | 45.0% | |
| TGGCTTACTTGATTGACCGA+AGG | + | chr1_4:33180427-33180446 | None:intergenic | 45.0% | |
| AGGTGGAGATGAATCCAGTT+TGG | - | chr1_4:33180637-33180656 | Msa0160520:intron | 45.0% | |
| AGCTTCTTCTGATGCCAAAC+TGG | + | chr1_4:33180654-33180673 | None:intergenic | 45.0% | |
| ! | TTCTCTCCTTTAGGAGCCAA+AGG | - | chr1_4:33180714-33180733 | Msa0160520:intron | 45.0% |
| ! | TCTCTCCTTTAGGAGCCAAA+GGG | - | chr1_4:33180715-33180734 | Msa0160520:intron | 45.0% |
| ! | CTCCTTGTTGTAGCTCTTCA+CGG | + | chr1_4:33181089-33181108 | None:intergenic | 45.0% |
| !! | CATTCCTAACCTTTGGGATG+GGG | - | chr1_4:33181216-33181235 | Msa0160520:CDS | 45.0% |
| CTTAAGTTTCCCCATCCCAA+AGG | + | chr1_4:33181228-33181247 | None:intergenic | 45.0% | |
| !!! | TTTATTTTAAATTAAAATTG+AGG | - | chr1_4:33174329-33174348 | Msa0160520:CDS | 5.0% |
| GCCGTACCAAATGCTATCAC+TGG | + | chr1_4:33173858-33173877 | None:intergenic | 50.0% | |
| GAGAGGGAGATGCATCTCAT+AGG | - | chr1_4:33175380-33175399 | Msa0160520:intron | 50.0% | |
| TTTCCCGGCTTCACACTGAT+TGG | + | chr1_4:33175699-33175718 | None:intergenic | 50.0% | |
| TCAGTGTGAAGCCGGGAAAT+TGG | - | chr1_4:33175700-33175719 | Msa0160520:CDS | 50.0% | |
| CAGTGTGAAGCCGGGAAATT+GGG | - | chr1_4:33175701-33175720 | Msa0160520:CDS | 50.0% | |
| ! | GAAAGGAGTGTGGACAGCAA+TGG | - | chr1_4:33175764-33175783 | Msa0160520:CDS | 50.0% |
| GCTATCTTCTTACGGGACCT+TGG | - | chr1_4:33176098-33176117 | Msa0160520:intron | 50.0% | |
| GGGACCTTGGTAAACATGGA+AGG | - | chr1_4:33176111-33176130 | Msa0160520:intron | 50.0% | |
| ! | TTTGGATCTTTGGGAAGCCG+TGG | - | chr1_4:33176236-33176255 | Msa0160520:intron | 50.0% |
| AGCCGTGGAAGAGGATTATG+AGG | - | chr1_4:33176251-33176270 | Msa0160520:intron | 50.0% | |
| GCTGCCGAATAATCCTACCA+TGG | - | chr1_4:33176281-33176300 | Msa0160520:intron | 50.0% | |
| GTTACATGCCTTGCAAGCTC+AGG | - | chr1_4:33176713-33176732 | Msa0160520:intron | 50.0% | |
| CTTCTCCAACATCTGAACGG+TGG | + | chr1_4:33176891-33176910 | None:intergenic | 50.0% | |
| TGCAGCAAGTGCAATCAGCT+TGG | - | chr1_4:33176924-33176943 | Msa0160520:intron | 50.0% | |
| CCTTAGTATCTCTCGACCAG+TGG | + | chr1_4:33177350-33177369 | None:intergenic | 50.0% | |
| CCACTGGTCGAGAGATACTA+AGG | - | chr1_4:33177347-33177366 | Msa0160520:intron | 50.0% | |
| CTTCTCGTTTGATCCGGTTG+AGG | - | chr1_4:33177390-33177409 | Msa0160520:intron | 50.0% | |
| ! | GCATTTTGCTCCTCCTCAAC+CGG | + | chr1_4:33177406-33177425 | None:intergenic | 50.0% |
| AAGTCAGTCCCACCGAACTT+TGG | - | chr1_4:33177437-33177456 | Msa0160520:intron | 50.0% | |
| CGCTTATGCCAAAGTTCGGT+GGG | + | chr1_4:33177448-33177467 | None:intergenic | 50.0% | |
| TCGCTTATGCCAAAGTTCGG+TGG | + | chr1_4:33177449-33177468 | None:intergenic | 50.0% | |
| GCAACTCATTCACACCGATG+TGG | - | chr1_4:33177633-33177652 | Msa0160520:intron | 50.0% | |
| !! | TCTTTGAGGTCCAGCCACAT+CGG | + | chr1_4:33177650-33177669 | None:intergenic | 50.0% |
| TTAGCCGCTTCTGCCCAAAA+TGG | + | chr1_4:33178015-33178034 | None:intergenic | 50.0% | |
| ! | ACTCCGTTTGAGGCTTGGTA+TGG | - | chr1_4:33178087-33178106 | Msa0160520:intron | 50.0% |
| ! | CTCCGTTTGAGGCTTGGTAT+GGG | - | chr1_4:33178088-33178107 | Msa0160520:intron | 50.0% |
| AGCAATTCCGGGCATCTTTG+TGG | - | chr1_4:33178200-33178219 | Msa0160520:intron | 50.0% | |
| GCAATTCCGGGCATCTTTGT+GGG | - | chr1_4:33178201-33178220 | Msa0160520:intron | 50.0% | |
| ! | ATCCTCCCATTAGAGGCACA+AGG | - | chr1_4:33178424-33178443 | Msa0160520:intron | 50.0% |
| ! | ACCAGCCTTGTGCCTCTAAT+GGG | + | chr1_4:33178432-33178451 | None:intergenic | 50.0% |
| AGTGCTTCCTCACAACAAGC+AGG | + | chr1_4:33178495-33178514 | None:intergenic | 50.0% | |
| TGGGAACTAGTTGACAAGCC+TGG | - | chr1_4:33178579-33178598 | Msa0160520:intron | 50.0% | |
| ! | ATCTTGCTGTACCAAGCCCT+TGG | + | chr1_4:33178954-33178973 | None:intergenic | 50.0% |
| ! | TTCTCTGATAGTGACTGGGC+TGG | - | chr1_4:33179557-33179576 | Msa0160520:intron | 50.0% |
| CGGCAGCAATTGAGTAGTCA+CGG | - | chr1_4:33180530-33180549 | Msa0160520:intron | 50.0% | |
| GGCTCCTAAAGGAGAGAAAG+CGG | + | chr1_4:33180712-33180731 | None:intergenic | 50.0% | |
| ! | CTCTCCTTTAGGAGCCAAAG+GGG | - | chr1_4:33180716-33180735 | Msa0160520:intron | 50.0% |
| GTATGAGCAAGGGGTGACTA+TGG | - | chr1_4:33181063-33181082 | Msa0160520:CDS | 50.0% | |
| GTTTCCCCATCCCAAAGGTT+AGG | + | chr1_4:33181223-33181242 | None:intergenic | 50.0% | |
| ! | GCCCTCAAGGGCACATGTTA+AGG | + | chr1_4:33174546-33174565 | None:intergenic | 55.0% |
| ! | GCTTCACACTGATTGGCCAG+TGG | + | chr1_4:33175692-33175711 | None:intergenic | 55.0% |
| CTGGCCAATCAGTGTGAAGC+CGG | - | chr1_4:33175692-33175711 | Msa0160520:CDS | 55.0% | |
| TGGCCAATCAGTGTGAAGCC+GGG | - | chr1_4:33175693-33175712 | Msa0160520:CDS | 55.0% | |
| ! | TCTTTGGGAAGCCGTGGAAG+AGG | - | chr1_4:33176242-33176261 | Msa0160520:intron | 55.0% |
| GTAGGATTATTCGGCAGCGG+AGG | + | chr1_4:33176279-33176298 | None:intergenic | 55.0% | |
| AGTCTCATCTGGGCCATGGT+AGG | + | chr1_4:33176297-33176316 | None:intergenic | 55.0% | |
| GTGAAGTCTCATCTGGGCCA+TGG | + | chr1_4:33176301-33176320 | None:intergenic | 55.0% | |
| GGCCCAGATGAGACTTCACA+AGG | - | chr1_4:33176302-33176321 | Msa0160520:intron | 55.0% | |
| GAAGGGGATGAGAGGATTCG+TGG | - | chr1_4:33176450-33176469 | Msa0160520:intron | 55.0% | |
| TCGTTGCTCCTGAGCTTGCA+AGG | + | chr1_4:33176724-33176743 | None:intergenic | 55.0% | |
| TGCAAGCTCAGGAGCAACGA+AGG | - | chr1_4:33176724-33176743 | Msa0160520:intron | 55.0% | |
| TGCTACAGTGCTCACAGGGT+GGG | + | chr1_4:33176857-33176876 | None:intergenic | 55.0% | |
| TTGCTACAGTGCTCACAGGG+TGG | + | chr1_4:33176858-33176877 | None:intergenic | 55.0% | |
| GTCACCCACCGTTCAGATGT+TGG | - | chr1_4:33176883-33176902 | Msa0160520:intron | 55.0% | |
| ! | CACTTGCTGCACTTCGCATC+CGG | + | chr1_4:33176915-33176934 | None:intergenic | 55.0% |
| CTCGTTTGATCCGGTTGAGG+AGG | - | chr1_4:33177393-33177412 | Msa0160520:intron | 55.0% | |
| CTCATTCACACCGATGTGGC+TGG | - | chr1_4:33177637-33177656 | Msa0160520:intron | 55.0% | |
| TTGGGCAGAAGCGGCTAACA+CGG | - | chr1_4:33178017-33178036 | Msa0160520:intron | 55.0% | |
| ! | AGCCTTGTGCCTCTAATGGG+AGG | + | chr1_4:33178429-33178448 | None:intergenic | 55.0% |
| ! | TCCCATTAGAGGCACAAGGC+TGG | - | chr1_4:33178428-33178447 | Msa0160520:intron | 55.0% |
| ! | CACCAGCCTTGTGCCTCTAA+TGG | + | chr1_4:33178433-33178452 | None:intergenic | 55.0% |
| CCTTGCACCACAAATCCCTC+TGG | + | chr1_4:33178876-33178895 | None:intergenic | 55.0% | |
| CCAGAGGGATTTGTGGTGCA+AGG | - | chr1_4:33178873-33178892 | Msa0160520:intron | 55.0% | |
| CTTGCTGACAGGAAGTGGCT+TGG | + | chr1_4:33179954-33179973 | None:intergenic | 55.0% | |
| GGCCGTGAAGAGCTACAACA+AGG | - | chr1_4:33181084-33181103 | Msa0160520:CDS | 55.0% | |
| CAGTCGCTGCTCAAAAGGGC+TGG | - | chr1_4:33178778-33178797 | Msa0160520:intron | 60.0% | |
| GGAGCAGCCAGAGGGATTTG+TGG | - | chr1_4:33178866-33178885 | Msa0160520:intron | 60.0% | |
| ! | CTGGCCCCTTTGGCTCCTAA+AGG | + | chr1_4:33180723-33180742 | None:intergenic | 60.0% |
| TAGGAGCCAAAGGGGCCAGT+TGG | - | chr1_4:33180724-33180743 | Msa0160520:intron | 60.0% | |
| AGGAGCCAAAGGGGCCAGTT+GGG | - | chr1_4:33180725-33180744 | Msa0160520:intron | 60.0% | |
| ACTACCCCAACTGGCCCCTT+TGG | + | chr1_4:33180733-33180752 | None:intergenic | 60.0% | |
| GGAGCCAAAGGGGCCAGTTG+GGG | - | chr1_4:33180726-33180745 | Msa0160520:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 33173660 | 33181402 | 33173660 | ID=Msa0160520;Name=Msa0160520 |
| chr1_4 | mRNA | 33173660 | 33181402 | 33173660 | ID=Msa0160520-mRNA-1;Parent=Msa0160520;Name=Msa0160520-mRNA-1;_AED=0.18;_eAED=0.18;_QI=135|0.4|0.66|0.83|0.8|0.83|6|156|388 |
| chr1_4 | exon | 33173660 | 33174016 | 33173660 | ID=Msa0160520-mRNA-1:exon:10398;Parent=Msa0160520-mRNA-1 |
| chr1_4 | exon | 33174244 | 33174423 | 33174244 | ID=Msa0160520-mRNA-1:exon:10397;Parent=Msa0160520-mRNA-1 |
| chr1_4 | exon | 33174624 | 33174797 | 33174624 | ID=Msa0160520-mRNA-1:exon:10396;Parent=Msa0160520-mRNA-1 |
| chr1_4 | exon | 33175644 | 33175796 | 33175644 | ID=Msa0160520-mRNA-1:exon:10395;Parent=Msa0160520-mRNA-1 |
| chr1_4 | exon | 33179277 | 33179409 | 33179277 | ID=Msa0160520-mRNA-1:exon:10394;Parent=Msa0160520-mRNA-1 |
| chr1_4 | exon | 33180942 | 33181402 | 33180942 | ID=Msa0160520-mRNA-1:exon:10393;Parent=Msa0160520-mRNA-1 |
| chr1_4 | five_prime_UTR | 33181268 | 33181402 | 33181268 | ID=Msa0160520-mRNA-1:five_prime_utr;Parent=Msa0160520-mRNA-1 |
| chr1_4 | CDS | 33180942 | 33181267 | 33180942 | ID=Msa0160520-mRNA-1:cds;Parent=Msa0160520-mRNA-1 |
| chr1_4 | CDS | 33179277 | 33179409 | 33179277 | ID=Msa0160520-mRNA-1:cds;Parent=Msa0160520-mRNA-1 |
| chr1_4 | CDS | 33175644 | 33175796 | 33175644 | ID=Msa0160520-mRNA-1:cds;Parent=Msa0160520-mRNA-1 |
| chr1_4 | CDS | 33174624 | 33174797 | 33174624 | ID=Msa0160520-mRNA-1:cds;Parent=Msa0160520-mRNA-1 |
| chr1_4 | CDS | 33174244 | 33174423 | 33174244 | ID=Msa0160520-mRNA-1:cds;Parent=Msa0160520-mRNA-1 |
| chr1_4 | CDS | 33173816 | 33174016 | 33173816 | ID=Msa0160520-mRNA-1:cds;Parent=Msa0160520-mRNA-1 |
| chr1_4 | three_prime_UTR | 33173660 | 33173815 | 33173660 | ID=Msa0160520-mRNA-1:three_prime_utr;Parent=Msa0160520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
