AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0780140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0780140 MtrunA17_Chr5g0444861 93.715 541 27 2 1 538 24 560 0.0 983
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0780140 AT5G55220.1 58.919 555 204 6 1 539 1 547 0.0 659

Find 109 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTCCTTGATTCTATAAT+TGG 0.141614 5_2:+61853953 Msa0780140:CDS
TCAGAAATCCATTTAATTTC+TGG 0.168583 5_2:-61853267 None:intergenic
CACATTACTTATTTCCCTTT+TGG 0.193084 5_2:-61856398 None:intergenic
CCGAAAGAAAACTCTTTAAA+TGG 0.194150 5_2:-61856072 None:intergenic
ATGTTGCACCAGAAATTAAA+TGG 0.259733 5_2:+61853259 Msa0780140:CDS
ATTATTCTCTCGGATATCTT+AGG 0.278137 5_2:+61853014 Msa0780140:CDS
GAGGTTGAAGGAGTTGAATT+TGG 0.284849 5_2:-61851148 None:intergenic
TCAATACCTGCATTTCTAAT+AGG 0.299634 5_2:-61854899 None:intergenic
GGTTACTGGAAGGGCTTTGC+AGG 0.317659 5_2:+61852946 Msa0780140:intron
CTGCAAATGGAACTCTTTGC+AGG 0.319833 5_2:-61856244 None:intergenic
AAGCACCGGCCAAACAAATT+AGG 0.327773 5_2:+61856032 Msa0780140:three_prime_UTR
CTTGATTCTATAATTGGAAT+TGG 0.335719 5_2:+61853959 Msa0780140:CDS
AAGATATCCGAGAGAATAAT+AGG 0.339434 5_2:-61853011 None:intergenic
TCTCACTTTCCTAATTTGTT+TGG 0.341930 5_2:-61856041 None:intergenic
TATATTAGATCAGATTTCTA+AGG 0.345020 5_2:+61854571 Msa0780140:CDS
AAACAGAGTTACTCACTCTT+TGG 0.347338 5_2:-61851000 None:intergenic
TAGCTGTTTGCTCTATCTCT+TGG 0.360719 5_2:-61854526 None:intergenic
TTCGATGCATACATAGTTGT+TGG 0.364385 5_2:-61856323 None:intergenic
AGTAACACATACTCTGGAAT+TGG 0.365055 5_2:-61851325 None:intergenic
AGTATTCTTGTTGGTTATGT+GGG 0.365092 5_2:+61852375 Msa0780140:CDS
CCGTCTTCCTGCTGAATTGA+AGG 0.365791 5_2:+61851284 Msa0780140:CDS
AGATATTCATTCACGGACTT+TGG 0.385184 5_2:-61855090 None:intergenic
TGGCAGTTGGTGACATATAT+AGG 0.388142 5_2:+61855157 Msa0780140:CDS
TAACCAACAAGAATACTTTC+CGG 0.396552 5_2:-61852369 None:intergenic
CTGTTTGATTGCTGCTGCCA+TGG 0.402955 5_2:+61851017 Msa0780140:exon
GAACAAGGTAGACAGCTATA+TGG 0.427214 5_2:+61854870 Msa0780140:CDS
AACCAACAAGAATACTTTCC+GGG 0.427325 5_2:-61852368 None:intergenic
TGGATGTACCACAGTGCAAC+AGG 0.439789 5_2:+61854375 Msa0780140:CDS
AAGTATTCTTGTTGGTTATG+TGG 0.444352 5_2:+61852374 Msa0780140:CDS
GTCCCGGAAAGTATTCTTGT+TGG 0.452137 5_2:+61852366 Msa0780140:CDS
TCAGTTGGTGTTACAAATGA+TGG 0.452495 5_2:-61856503 None:intergenic
CGAACTTTGTAAACTCAACT+AGG 0.456526 5_2:-61851986 None:intergenic
TTACAGAGATTTACCAGAGC+TGG 0.456759 5_2:+61854324 Msa0780140:CDS
ATGTCAATGTCAATCCCAAA+AGG 0.459984 5_2:+61856383 Msa0780140:three_prime_UTR
AACTTCTTTCTAGCATGGAA+TGG 0.465422 5_2:-61856271 None:intergenic
ACTTCTTTCTAGCATGGAAT+GGG 0.465976 5_2:-61856270 None:intergenic
GAAGAAGGAAGAGAGAAAGA+AGG 0.469342 5_2:-61851084 None:intergenic
TGTTGCACTGTGGTACATCC+AGG 0.475737 5_2:-61854373 None:intergenic
ATTGAAGGTCACTGAGACAA+AGG 0.476315 5_2:+61851299 Msa0780140:CDS
CGAGGAACGTGTAAAGGAAC+AGG 0.479197 5_2:+61855504 Msa0780140:CDS
GAAGAAGAAGAAGGAGATGA+AGG 0.480983 5_2:-61851237 None:intergenic
TGAATATCTTGAGCATCATA+AGG 0.481148 5_2:+61855104 Msa0780140:CDS
AAGAAGGAAGAGAGAAAGAA+GGG 0.486758 5_2:-61851083 None:intergenic
ACTTTCCTAATTTGTTTGGC+CGG 0.487830 5_2:-61856037 None:intergenic
GCGTATAACGAGAAATATAT+CGG 0.491183 5_2:-61856351 None:intergenic
TACCTGCATTTCTAATAGGC+TGG 0.492031 5_2:-61854895 None:intergenic
GAAAGAAGATGAGAGGTTGA+AGG 0.492372 5_2:-61851160 None:intergenic
AAAACTAACTGAAGAGCAGC+TGG 0.495940 5_2:+61855053 Msa0780140:CDS
ATCCAGCCTATTAGAAATGC+AGG 0.500445 5_2:+61854893 Msa0780140:CDS
ATAGTTGTTGGAAAGATTTG+AGG 0.501400 5_2:-61856311 None:intergenic
ATACGACGAGGAACGTGTAA+AGG 0.502907 5_2:+61855498 Msa0780140:CDS
AATAAGTAATGTGATATTCA+AGG 0.519149 5_2:+61856408 Msa0780140:three_prime_UTR
ATTCCTTCTGCTGAAAGTAA+AGG 0.519175 5_2:+61853783 Msa0780140:CDS
GAGGATACCTATTATTCTCT+CGG 0.520497 5_2:+61853004 Msa0780140:CDS
TGTTACTGACAGAGGACTAC+AGG 0.522402 5_2:+61853404 Msa0780140:CDS
AAGGAGCTAAGGTGCTAGAA+TGG 0.522425 5_2:+61855965 Msa0780140:CDS
GCAATAGAATCATCCAGCTC+TGG 0.523626 5_2:-61854337 None:intergenic
CTACCTTTACTTTCAGCAGA+AGG 0.525053 5_2:-61853786 None:intergenic
TCTATAATTGGAATTGGTCG+AGG 0.525412 5_2:+61853965 Msa0780140:CDS
TCTGTAACTTCTTTCTAGCA+TGG 0.526461 5_2:-61856276 None:intergenic
TCAGTGACCTTCAATTCAGC+AGG 0.527113 5_2:-61851291 None:intergenic
AGAAGGCGTTACAAGTCAGC+TGG 0.527767 5_2:+61853369 Msa0780140:CDS
AAGAGATAGAGCAAACAGCT+AGG 0.529180 5_2:+61854528 Msa0780140:CDS
CAATTCCAATTATAGAATCA+AGG 0.531449 5_2:-61853958 None:intergenic
GATATTTGATTCTTGATCAA+CGG 0.532623 5_2:-61853754 None:intergenic
TATATATGTCACCAACTGCC+AGG 0.537928 5_2:-61855155 None:intergenic
CAGGTACCTGGATTTCGTCC+TGG 0.538561 5_2:+61852336 Msa0780140:intron
ATTGCTGATAAACTTATCCC+TGG 0.539379 5_2:+61854355 Msa0780140:CDS
AGTTCAACTGAAGAAGAAGA+AGG 0.540285 5_2:-61851246 None:intergenic
TGTTCATCAAACAAGGATTG+AGG 0.541311 5_2:-61854852 None:intergenic
ATGCTCAAGATATTCATTCA+CGG 0.543020 5_2:-61855097 None:intergenic
AAGGTTCAAGAAATACTAGA+AGG 0.544740 5_2:+61855946 Msa0780140:intron
GCATGTGGAGGTACCATCAC+TGG 0.547973 5_2:+61851938 Msa0780140:CDS
ATGGAATGGGTGTCTGCAAA+TGG 0.547984 5_2:-61856257 None:intergenic
CAATCCTTGTTTGATGAACA+AGG 0.549416 5_2:+61854855 Msa0780140:CDS
TGTCAATGTCAATCCCAAAA+GGG 0.553031 5_2:+61856384 Msa0780140:three_prime_UTR
ATCAAACAGAACCTGGCAGT+TGG 0.559239 5_2:+61855144 Msa0780140:CDS
AGAAATACTAGAAGGAGCTA+AGG 0.563256 5_2:+61855954 Msa0780140:CDS
TTGACGTTTGAATTCAGCAA+TGG 0.576175 5_2:-61855467 None:intergenic
ATATAGGCGTGAAAATATGC+AGG 0.579562 5_2:+61855173 Msa0780140:CDS
CTACAATCGAATCAATATTG+AGG 0.580213 5_2:+61852418 Msa0780140:CDS
GTTGAATGAAAGAAGATGAG+AGG 0.583243 5_2:-61851167 None:intergenic
AAATTTGATCAAACAGAACC+TGG 0.587535 5_2:+61855137 Msa0780140:CDS
GTATTCTTGTTGGTTATGTG+GGG 0.588330 5_2:+61852376 Msa0780140:CDS
AGAGATAGAGCAAACAGCTA+GGG 0.589916 5_2:+61854529 Msa0780140:CDS
TCTACCTTGTTCATCAAACA+AGG 0.591447 5_2:-61854859 None:intergenic
AGGAGAAGCTGAGACAGTGA+AGG 0.592794 5_2:-61851217 None:intergenic
ATGCGAGGACTGTTACGAAA+GGG 0.596481 5_2:+61851962 Msa0780140:CDS
ATTATAGAATCAAGGAAACC+TGG 0.599565 5_2:-61853950 None:intergenic
TGAGTTTACAAAGTTCGCCA+AGG 0.601858 5_2:+61851992 Msa0780140:CDS
CAGTCCTCGCATACCAGTGA+TGG 0.604531 5_2:-61851951 None:intergenic
TCTTTGATGATGTCTTCAGT+AGG 0.610103 5_2:-61855433 None:intergenic
TAAACTGAGCATGAACACCT+TGG 0.610469 5_2:-61854042 None:intergenic
TACTGAAGACATCATCAAAG+AGG 0.612818 5_2:+61855435 Msa0780140:CDS
GGAGAAGCTGAGACAGTGAA+GGG 0.614506 5_2:-61851216 None:intergenic
GATGGTGAAATATTAGTACC+AGG 0.615164 5_2:+61853932 Msa0780140:CDS
ACTTTCACACGCTGTAACAG+CGG 0.616868 5_2:+61852446 Msa0780140:CDS
CTGAAAGTTGTTACTGACAG+AGG 0.619184 5_2:+61853396 Msa0780140:CDS
CCTGCAGGTTAGATTGCATG+TGG 0.627284 5_2:+61851923 Msa0780140:intron
CCTTCAATTCAGCAGGAAGA+CGG 0.628013 5_2:-61851284 None:intergenic
ACAAAATGAGAGACAAGCAC+CGG 0.645226 5_2:+61856018 Msa0780140:exon
TATGCGAGGACTGTTACGAA+AGG 0.650131 5_2:+61851961 Msa0780140:CDS
GTTGCACTGTGGTACATCCA+GGG 0.654086 5_2:-61854372 None:intergenic
TGGAAGCAGGAAAATCTCCA+AGG 0.665686 5_2:+61854025 Msa0780140:CDS
GCAGGTTAGATTGCATGTGG+AGG 0.673127 5_2:+61851926 Msa0780140:intron
GGTACCATCACTGGTATGCG+AGG 0.674391 5_2:+61851947 Msa0780140:CDS
AGTTCGAGTACAGAGCTCCA+TGG 0.675973 5_2:-61851034 None:intergenic
CAATCGAATCAATATTGAGG+AGG 0.680020 5_2:+61852421 Msa0780140:CDS
AAAAGTCACCTGTTGCACTG+TGG 0.753690 5_2:-61854383 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTACATAATATTTTTTATTT+CGG - chr5_2:61855614-61855633 None:intergenic 10.0%
!!! TATATGGTAATATTTTGATA+TGG + chr5_2:61851399-61851418 Msa0780140:intron 15.0%
!!! TATAGTCAATTTTGTTTTAT+AGG + chr5_2:61852925-61852944 Msa0780140:intron 15.0%
!! AAAATACATATAAAAGGAAA+TGG - chr5_2:61853648-61853667 None:intergenic 15.0%
!!! TTTTTTTTTCCTTTAAATGT+TGG - chr5_2:61854967-61854986 None:intergenic 15.0%
!! AGTCTATTTAGTAAATTATT+TGG + chr5_2:61855369-61855388 Msa0780140:intron 15.0%
!!! TTCTAAATAATGGAATATAA+AGG + chr5_2:61855723-61855742 Msa0780140:intron 15.0%
!! TATCAATCAATCTTTAAATT+AGG - chr5_2:61855905-61855924 None:intergenic 15.0%
!!! TTTAAGTTTTCAAAGTAATC+TGG + chr5_2:61851698-61851717 Msa0780140:intron 20.0%
!!! TTTTCTGAATGAATTTTGTT+TGG - chr5_2:61852082-61852101 None:intergenic 20.0%
!! ATGATTTCTGATATCTAAAT+TGG + chr5_2:61852136-61852155 Msa0780140:intron 20.0%
!! TAGTAAACTTGTATATGATA+TGG - chr5_2:61852240-61852259 None:intergenic 20.0%
!!! ACATTTTTCAGTAATAACTT+TGG - chr5_2:61852860-61852879 None:intergenic 20.0%
!! AAAGTTATTACTGAAAAATG+TGG + chr5_2:61852859-61852878 Msa0780140:intron 20.0%
!!! AATTTTGTTTTATAGGTTAC+TGG + chr5_2:61852932-61852951 Msa0780140:intron 20.0%
!!! AGTTACTAAATTTTCTGATA+TGG + chr5_2:61852982-61853001 Msa0780140:CDS 20.0%
!! TTTATGAGTATAGATAAGTT+TGG - chr5_2:61853114-61853133 None:intergenic 20.0%
!! ATACTCATAAAATAGAGAAA+AGG + chr5_2:61853123-61853142 Msa0780140:intron 20.0%
!!! TTTCTTTTCCATTTTTAATG+TGG + chr5_2:61853469-61853488 Msa0780140:intron 20.0%
!! TTAAGAAACCACATTAAAAA+TGG - chr5_2:61853480-61853499 None:intergenic 20.0%
!! TATATTAGATCAGATTTCTA+AGG + chr5_2:61854571-61854590 Msa0780140:CDS 20.0%
!!! TTTTTTTTCCTTTCTTTTTC+TGG + chr5_2:61854740-61854759 Msa0780140:intron 20.0%
!! CACATTTATTTGTTCTTATT+TGG + chr5_2:61855003-61855022 Msa0780140:intron 20.0%
!!! ATTATGTACCGTTTTTAAAA+TGG + chr5_2:61855625-61855644 Msa0780140:intron 20.0%
!! AAAAAAAATACTATGCAAGT+AGG - chr5_2:61855672-61855691 None:intergenic 20.0%
!! GAGATGTATATTCTAAATAA+TGG + chr5_2:61855713-61855732 Msa0780140:intron 20.0%
!!! ATTGTTCTTAGTTTGTATTT+GGG - chr5_2:61855758-61855777 None:intergenic 20.0%
!!! TATTTTCTTACAACTTACAT+TGG - chr5_2:61856098-61856117 None:intergenic 20.0%
!! AATAAGTAATGTGATATTCA+AGG + chr5_2:61856408-61856427 Msa0780140:three_prime_UTR 20.0%
! CTTTATCTCAGTTTGATATA+TGG + chr5_2:61851383-61851402 Msa0780140:intron 25.0%
! GTAAAATAGTGAAGTGTAAT+TGG + chr5_2:61851421-61851440 Msa0780140:intron 25.0%
!! ACTAAACAATTTTTGTCATC+AGG - chr5_2:61851650-61851669 None:intergenic 25.0%
! GAAAACTTAAACTCTAAATC+AGG - chr5_2:61851689-61851708 None:intergenic 25.0%
! CAGATTATATATGTACACTA+TGG - chr5_2:61851773-61851792 None:intergenic 25.0%
! CATAGTGTACATATATAATC+TGG + chr5_2:61851771-61851790 Msa0780140:intron 25.0%
! TACATATATAATCTGGTGTA+TGG + chr5_2:61851778-61851797 Msa0780140:intron 25.0%
! AGCATAAATCAATAATACCT+TGG - chr5_2:61852012-61852031 None:intergenic 25.0%
! ATTTCTGATATCTAAATTGG+AGG + chr5_2:61852139-61852158 Msa0780140:intron 25.0%
! AACTTGTATATGATATGGTA+GGG - chr5_2:61852235-61852254 None:intergenic 25.0%
! AAACTTGTATATGATATGGT+AGG - chr5_2:61852236-61852255 None:intergenic 25.0%
!! TAACAATGTTTTACTTCAAC+AGG + chr5_2:61852317-61852336 Msa0780140:intron 25.0%
!!! TTAGCTTTTTAGACAATGTT+GGG + chr5_2:61852528-61852547 Msa0780140:intron 25.0%
! AGTAATATGATGAATATGAC+TGG - chr5_2:61852622-61852641 None:intergenic 25.0%
!! TACTGAAAAATGTGGATTAT+TGG + chr5_2:61852867-61852886 Msa0780140:intron 25.0%
!! TACTAAATTTTCTGATATGG+AGG + chr5_2:61852985-61853004 Msa0780140:CDS 25.0%
!! TCAGAAATCCATTTAATTTC+TGG - chr5_2:61853270-61853289 None:intergenic 25.0%
! CATCTGAAAAAGAATTTAGA+AGG + chr5_2:61853352-61853371 Msa0780140:CDS 25.0%
! AAAACATTCATGAGGAAATA+TGG - chr5_2:61853584-61853603 None:intergenic 25.0%
! GACTAAATAAAACATTCATG+AGG - chr5_2:61853592-61853611 None:intergenic 25.0%
!!! TTGTGCGTATTTAATTTTAC+AGG + chr5_2:61853695-61853714 Msa0780140:intron 25.0%
! GATATTTGATTCTTGATCAA+CGG - chr5_2:61853757-61853776 None:intergenic 25.0%
!! ATTTGTGATAGCAGTTATTT+TGG + chr5_2:61853839-61853858 Msa0780140:intron 25.0%
!!! TTTGTGATAGCAGTTATTTT+GGG + chr5_2:61853840-61853859 Msa0780140:intron 25.0%
! CAATTCCAATTATAGAATCA+AGG - chr5_2:61853961-61853980 None:intergenic 25.0%
! CTTGATTCTATAATTGGAAT+TGG + chr5_2:61853959-61853978 Msa0780140:CDS 25.0%
! AAAACTATTATGCTGTATGT+TGG - chr5_2:61854119-61854138 None:intergenic 25.0%
!! CAGCATAATAGTTTTTCTTT+TGG + chr5_2:61854124-61854143 Msa0780140:intron 25.0%
! TCACATACATGTATAGTTTA+TGG + chr5_2:61854168-61854187 Msa0780140:intron 25.0%
! TAAGGTAACATTACATCATT+AGG + chr5_2:61854589-61854608 Msa0780140:intron 25.0%
! ATGTTGAAAAAAATGTTGTG+AGG - chr5_2:61854661-61854680 None:intergenic 25.0%
!! ATTCATATTGTCATTTCAGA+TGG + chr5_2:61854815-61854834 Msa0780140:intron 25.0%
! TTCTATACAAATAGTTACTC+AGG + chr5_2:61855221-61855240 Msa0780140:intron 25.0%
!! TATACACTCATATCATCTTT+TGG - chr5_2:61855275-61855294 None:intergenic 25.0%
!!! CATTGTTCTTAGTTTGTATT+TGG - chr5_2:61855759-61855778 None:intergenic 25.0%
! CAAATACAAACTAAGAACAA+TGG + chr5_2:61855757-61855776 Msa0780140:intron 25.0%
!!! GGTTGCATTTTTCAATTTTA+AGG + chr5_2:61855849-61855868 Msa0780140:intron 25.0%
! ATCTATTTGAACTTTCTTGA+AGG + chr5_2:61855927-61855946 Msa0780140:intron 25.0%
!! CCATTTAAAGAGTTTTCTTT+CGG + chr5_2:61856072-61856091 Msa0780140:three_prime_UTR 25.0%
!! ACATTACTTATTTCCCTTTT+GGG - chr5_2:61856400-61856419 None:intergenic 25.0%
AGAAAAAGTAACACATACTC+TGG - chr5_2:61851334-61851353 None:intergenic 30.0%
GTATGGTATAATTGTTTCCA+TGG + chr5_2:61851795-61851814 Msa0780140:intron 30.0%
CTTAAGAGAAGATAATGCTA+AGG + chr5_2:61851870-61851889 Msa0780140:intron 30.0%
ATATATTTATGCTATCCTGC+AGG + chr5_2:61851908-61851927 Msa0780140:intron 30.0%
! CAGCATGTTTTCTTAAAAGA+GGG - chr5_2:61852268-61852287 None:intergenic 30.0%
TAACCAACAAGAATACTTTC+CGG - chr5_2:61852372-61852391 None:intergenic 30.0%
! AAGTATTCTTGTTGGTTATG+TGG + chr5_2:61852374-61852393 Msa0780140:CDS 30.0%
! AGTATTCTTGTTGGTTATGT+GGG + chr5_2:61852375-61852394 Msa0780140:CDS 30.0%
CTACAATCGAATCAATATTG+AGG + chr5_2:61852418-61852437 Msa0780140:CDS 30.0%
!!! GTTAGCTTTTTAGACAATGT+TGG + chr5_2:61852527-61852546 Msa0780140:intron 30.0%
CGTACTATAAAGATGTTTGT+TGG + chr5_2:61852654-61852673 Msa0780140:intron 30.0%
CTCACACAAATTTACTATCA+TGG - chr5_2:61852736-61852755 None:intergenic 30.0%
AATAACTTTGGACAAACGAT+TGG - chr5_2:61852848-61852867 None:intergenic 30.0%
!! TTGTTTTATAGGTTACTGGA+AGG + chr5_2:61852936-61852955 Msa0780140:intron 30.0%
! TGTTTTATAGGTTACTGGAA+GGG + chr5_2:61852937-61852956 Msa0780140:intron 30.0%
AAGATATCCGAGAGAATAAT+AGG - chr5_2:61853014-61853033 None:intergenic 30.0%
ATTATTCTCTCGGATATCTT+AGG + chr5_2:61853014-61853033 Msa0780140:CDS 30.0%
ATAACAGACTCAAAAAAAGG+AGG - chr5_2:61853090-61853109 None:intergenic 30.0%
GGTATAACAGACTCAAAAAA+AGG - chr5_2:61853093-61853112 None:intergenic 30.0%
ATGTTGCACCAGAAATTAAA+TGG + chr5_2:61853259-61853278 Msa0780140:CDS 30.0%
TGATGCATACAAAAACTTGA+AGG + chr5_2:61853290-61853309 Msa0780140:CDS 30.0%
ATAGATTCTGAACACTTGTT+TGG - chr5_2:61853561-61853580 None:intergenic 30.0%
!!! TGAATGTTTTATTTAGTCGC+AGG + chr5_2:61853594-61853613 Msa0780140:intron 30.0%
!! GCGTATTTAATTTTACAGGT+CGG + chr5_2:61853699-61853718 Msa0780140:intron 30.0%
!! TTGTGATAGCAGTTATTTTG+GGG + chr5_2:61853841-61853860 Msa0780140:intron 30.0%
AAACATTATACTACGTATGC+AGG + chr5_2:61853890-61853909 Msa0780140:intron 30.0%
!! AGGATTCAATTTTGATACAG+AGG + chr5_2:61853910-61853929 Msa0780140:intron 30.0%
!! TTCAATTTTGATACAGAGGA+TGG + chr5_2:61853914-61853933 Msa0780140:CDS 30.0%
ATTATAGAATCAAGGAAACC+TGG - chr5_2:61853953-61853972 None:intergenic 30.0%
GGTTTCCTTGATTCTATAAT+TGG + chr5_2:61853953-61853972 Msa0780140:CDS 30.0%
ATACATGTATGTGAACAAGT+TGG - chr5_2:61854162-61854181 None:intergenic 30.0%
GAATTGTGAGTAAAATTCTC+CGG + chr5_2:61854464-61854483 Msa0780140:intron 30.0%
TATAGCTACCAGAAAAAGAA+AGG - chr5_2:61854751-61854770 None:intergenic 30.0%
TCAATACCTGCATTTCTAAT+AGG - chr5_2:61854902-61854921 None:intergenic 30.0%
CTTTATCCAATCAGAAAACT+TGG + chr5_2:61854938-61854957 Msa0780140:intron 30.0%
ACTTGGATTCCAACATTTAA+AGG + chr5_2:61854955-61854974 Msa0780140:intron 30.0%
ATGCTCAAGATATTCATTCA+CGG - chr5_2:61855100-61855119 None:intergenic 30.0%
TGAATATCTTGAGCATCATA+AGG + chr5_2:61855104-61855123 Msa0780140:CDS 30.0%
AAATTTGATCAAACAGAACC+TGG + chr5_2:61855137-61855156 Msa0780140:CDS 30.0%
! TCATATCATCTTTTGGCAAT+GGG - chr5_2:61855268-61855287 None:intergenic 30.0%
AGCAAGCAAATTCAAAAGTA+AGG - chr5_2:61855536-61855555 None:intergenic 30.0%
!! TACACGGTCCATTTTAAAAA+CGG - chr5_2:61855636-61855655 None:intergenic 30.0%
!!! TTTTTAAAATGGACCGTGTA+GGG + chr5_2:61855636-61855655 Msa0780140:intron 30.0%
!!! TCTCTTTTTGCTGTTTCAAA+AGG - chr5_2:61855697-61855716 None:intergenic 30.0%
! CAAAAGTCACTTCATTTTGT+AGG + chr5_2:61855813-61855832 Msa0780140:intron 30.0%
AAGGTTCAAGAAATACTAGA+AGG + chr5_2:61855946-61855965 Msa0780140:intron 30.0%
!! TCTCACTTTCCTAATTTGTT+TGG - chr5_2:61856044-61856063 None:intergenic 30.0%
CCGAAAGAAAACTCTTTAAA+TGG - chr5_2:61856075-61856094 None:intergenic 30.0%
!!! CTATTTCCTACTGTTTTTGT+TGG - chr5_2:61856214-61856233 None:intergenic 30.0%
ATAGTTGTTGGAAAGATTTG+AGG - chr5_2:61856314-61856333 None:intergenic 30.0%
GCGTATAACGAGAAATATAT+CGG - chr5_2:61856354-61856373 None:intergenic 30.0%
! CACATTACTTATTTCCCTTT+TGG - chr5_2:61856401-61856420 None:intergenic 30.0%
AAGAAGGAAGAGAGAAAGAA+GGG - chr5_2:61851086-61851105 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG - chr5_2:61851102-61851121 None:intergenic 35.0%
GTTGAATGAAAGAAGATGAG+AGG - chr5_2:61851170-61851189 None:intergenic 35.0%
GAAGTGTGATGAAAAAGAGA+AGG - chr5_2:61851192-61851211 None:intergenic 35.0%
AGTTCAACTGAAGAAGAAGA+AGG - chr5_2:61851249-61851268 None:intergenic 35.0%
!! AGTAACACATACTCTGGAAT+TGG - chr5_2:61851328-61851347 None:intergenic 35.0%
TACACTCATAACATTCTTCC+AGG - chr5_2:61851602-61851621 None:intergenic 35.0%
CGAACTTTGTAAACTCAACT+AGG - chr5_2:61851989-61852008 None:intergenic 35.0%
TCTCTTCCATGCAAAATTTG+AGG + chr5_2:61852179-61852198 Msa0780140:intron 35.0%
! CAGTAACCTCAAATTTTGCA+TGG - chr5_2:61852188-61852207 None:intergenic 35.0%
! GCAGCATGTTTTCTTAAAAG+AGG - chr5_2:61852269-61852288 None:intergenic 35.0%
AACCAACAAGAATACTTTCC+GGG - chr5_2:61852371-61852390 None:intergenic 35.0%
! GTATTCTTGTTGGTTATGTG+GGG + chr5_2:61852376-61852395 Msa0780140:CDS 35.0%
GGGGAGTAAAAATGTTCAAA+AGG + chr5_2:61852395-61852414 Msa0780140:CDS 35.0%
CAATCGAATCAATATTGAGG+AGG + chr5_2:61852421-61852440 Msa0780140:CDS 35.0%
TAACATCAAGAAAGAACGCA+AGG - chr5_2:61852511-61852530 None:intergenic 35.0%
TATCATGGACATCGATAATG+TGG - chr5_2:61852721-61852740 None:intergenic 35.0%
!! TCATGTCAAAGGCATTTCAT+TGG - chr5_2:61852768-61852787 None:intergenic 35.0%
AATGAAATGCCTTTGACATG+AGG + chr5_2:61852767-61852786 Msa0780140:intron 35.0%
GAGGATACCTATTATTCTCT+CGG + chr5_2:61853004-61853023 Msa0780140:CDS 35.0%
!!! CTCGCTTATTTCACTTTTTC+AGG + chr5_2:61853220-61853239 Msa0780140:intron 35.0%
ATTCCTTCTGCTGAAAGTAA+AGG + chr5_2:61853783-61853802 Msa0780140:CDS 35.0%
GATGGTGAAATATTAGTACC+AGG + chr5_2:61853932-61853951 Msa0780140:CDS 35.0%
TCTATAATTGGAATTGGTCG+AGG + chr5_2:61853965-61853984 Msa0780140:CDS 35.0%
ATGTTTCAGGAAAAACAAGG+GGG - chr5_2:61854006-61854025 None:intergenic 35.0%
CATGTTTCAGGAAAAACAAG+GGG - chr5_2:61854007-61854026 None:intergenic 35.0%
CCATGTTTCAGGAAAAACAA+GGG - chr5_2:61854008-61854027 None:intergenic 35.0%
TCCATGTTTCAGGAAAAACA+AGG - chr5_2:61854009-61854028 None:intergenic 35.0%
CATACACAAACACAGATCAA+AGG - chr5_2:61854222-61854241 None:intergenic 35.0%
ACGAACCCATTGAACTTTAA+CGG + chr5_2:61854245-61854264 Msa0780140:intron 35.0%
TGCTTCCGTTAAAGTTCAAT+GGG - chr5_2:61854253-61854272 None:intergenic 35.0%
TTGCTTCCGTTAAAGTTCAA+TGG - chr5_2:61854254-61854273 None:intergenic 35.0%
GCTTCTCTTTCATTTCTAAC+AGG + chr5_2:61854282-61854301 Msa0780140:intron 35.0%
ATTGCTGATAAACTTATCCC+TGG + chr5_2:61854355-61854374 Msa0780140:CDS 35.0%
ACTATGACAATTGCACTTGA+GGG - chr5_2:61854412-61854431 None:intergenic 35.0%
TACTATGACAATTGCACTTG+AGG - chr5_2:61854413-61854432 None:intergenic 35.0%
CTAACAATAAGTCTTTGACC+TGG - chr5_2:61854499-61854518 None:intergenic 35.0%
TTGTGAGGTACATTCTAATC+TGG - chr5_2:61854646-61854665 None:intergenic 35.0%
GAAACACATCATTATGCACA+AGG - chr5_2:61854698-61854717 None:intergenic 35.0%
TGTTCATCAAACAAGGATTG+AGG - chr5_2:61854855-61854874 None:intergenic 35.0%
! CAATCCTTGTTTGATGAACA+AGG + chr5_2:61854855-61854874 Msa0780140:CDS 35.0%
TCTACCTTGTTCATCAAACA+AGG - chr5_2:61854862-61854881 None:intergenic 35.0%
!! ATGCAGGTATTGATTCAAGT+AGG + chr5_2:61854909-61854928 Msa0780140:intron 35.0%
! TGGAATCCAAGTTTTCTGAT+TGG - chr5_2:61854947-61854966 None:intergenic 35.0%
AGATATTCATTCACGGACTT+TGG - chr5_2:61855093-61855112 None:intergenic 35.0%
ATATAGGCGTGAAAATATGC+AGG + chr5_2:61855173-61855192 Msa0780140:CDS 35.0%
! CTCATATCATCTTTTGGCAA+TGG - chr5_2:61855269-61855288 None:intergenic 35.0%
CTCAATCAGATTAAACTGAG+TGG - chr5_2:61855302-61855321 None:intergenic 35.0%
GAAGCTAGAGAACAACATAT+AGG - chr5_2:61855414-61855433 None:intergenic 35.0%
!! TCTTTGATGATGTCTTCAGT+AGG - chr5_2:61855436-61855455 None:intergenic 35.0%
TACTGAAGACATCATCAAAG+AGG + chr5_2:61855435-61855454 Msa0780140:CDS 35.0%
TTGACGTTTGAATTCAGCAA+TGG - chr5_2:61855470-61855489 None:intergenic 35.0%
TCAAAAACAAGAATACGACG+AGG + chr5_2:61855486-61855505 Msa0780140:CDS 35.0%
!!! GTTTTTAAAATGGACCGTGT+AGG + chr5_2:61855635-61855654 Msa0780140:intron 35.0%
AAGATACCGTGTAATCCTTT+CGG - chr5_2:61855787-61855806 None:intergenic 35.0%
! TCACTTCATTTTGTAGGCAA+TGG + chr5_2:61855819-61855838 Msa0780140:intron 35.0%
TTTGTAGGCAATGGTAGTTT+AGG + chr5_2:61855828-61855847 Msa0780140:intron 35.0%
AGAAATACTAGAAGGAGCTA+AGG + chr5_2:61855954-61855973 Msa0780140:CDS 35.0%
!! ACTTTCCTAATTTGTTTGGC+CGG - chr5_2:61856040-61856059 None:intergenic 35.0%
! ACTTCTTTCTAGCATGGAAT+GGG - chr5_2:61856273-61856292 None:intergenic 35.0%
! AACTTCTTTCTAGCATGGAA+TGG - chr5_2:61856274-61856293 None:intergenic 35.0%
! TCTGTAACTTCTTTCTAGCA+TGG - chr5_2:61856279-61856298 None:intergenic 35.0%
TTCGATGCATACATAGTTGT+TGG - chr5_2:61856326-61856345 None:intergenic 35.0%
ATGTCAATGTCAATCCCAAA+AGG + chr5_2:61856383-61856402 Msa0780140:three_prime_UTR 35.0%
TGTCAATGTCAATCCCAAAA+GGG + chr5_2:61856384-61856403 Msa0780140:three_prime_UTR 35.0%
ACTCAGCAGTTAAAAAAGAG+TGG + chr5_2:61856455-61856474 Msa0780140:three_prime_UTR 35.0%
GAAGAAGGAAGAGAGAAAGA+AGG - chr5_2:61851087-61851106 None:intergenic 40.0%
GAGGTTGAAGGAGTTGAATT+TGG - chr5_2:61851151-61851170 None:intergenic 40.0%
GAAAGAAGATGAGAGGTTGA+AGG - chr5_2:61851163-61851182 None:intergenic 40.0%
GAAGAAGAAGAAGGAGATGA+AGG - chr5_2:61851240-61851259 None:intergenic 40.0%
ATTGAAGGTCACTGAGACAA+AGG + chr5_2:61851299-61851318 Msa0780140:CDS 40.0%
AATTGGACCTGAAATTTCGC+CGG + chr5_2:61851438-61851457 Msa0780140:intron 40.0%
! TATAGAAGTGTAGCTAGTCC+TGG + chr5_2:61851581-61851600 Msa0780140:intron 40.0%
! TTGTTTCCATGGAAGAGTGT+AGG + chr5_2:61851806-61851825 Msa0780140:intron 40.0%
TGAGTTTACAAAGTTCGCCA+AGG + chr5_2:61851992-61852011 Msa0780140:CDS 40.0%
! GTTTTACTTCAACAGGTACC+TGG + chr5_2:61852324-61852343 Msa0780140:intron 40.0%
!!! TTTTTTCCAGGACGAAATCC+AGG - chr5_2:61852345-61852364 None:intergenic 40.0%
TGGATTTCGTCCTGGAAAAA+AGG + chr5_2:61852344-61852363 Msa0780140:CDS 40.0%
AACAGCGGTATGTTGTAATC+TGG + chr5_2:61852461-61852480 Msa0780140:intron 40.0%
CATGATCAAGGAATCACTCA+TGG - chr5_2:61852580-61852599 None:intergenic 40.0%
CATGAGTGATTCCTTGATCA+TGG + chr5_2:61852578-61852597 Msa0780140:intron 40.0%
CTGTTTACTAGCCATGATCA+AGG - chr5_2:61852592-61852611 None:intergenic 40.0%
TTGTGTTAGTGCAATGTGCA+TGG - chr5_2:61852681-61852700 None:intergenic 40.0%
TGGACATCGATAATGTGGAA+TGG - chr5_2:61852716-61852735 None:intergenic 40.0%
GTAACAAGTCCTCATGTCAA+AGG - chr5_2:61852779-61852798 None:intergenic 40.0%
ATCTGCAGTGTAGAAGTCAT+CGG - chr5_2:61853181-61853200 None:intergenic 40.0%
CTGAAAGTTGTTACTGACAG+AGG + chr5_2:61853396-61853415 Msa0780140:CDS 40.0%
ACAAGTGTCAGTTAGTTGAC+TGG - chr5_2:61853449-61853468 None:intergenic 40.0%
CTACCTTTACTTTCAGCAGA+AGG - chr5_2:61853789-61853808 None:intergenic 40.0%
CTTCTGCTGAAAGTAAAGGT+AGG + chr5_2:61853787-61853806 Msa0780140:intron 40.0%
TAGGTGATGTGCTTGCAAAA+TGG + chr5_2:61853806-61853825 Msa0780140:intron 40.0%
!!! CCCTTGTTTTTCCTGAAACA+TGG + chr5_2:61854005-61854024 Msa0780140:CDS 40.0%
! TTTTCCTGAAACATGGAAGC+AGG + chr5_2:61854012-61854031 Msa0780140:CDS 40.0%
! TTTTCCTGCTTCCATGTTTC+AGG - chr5_2:61854019-61854038 None:intergenic 40.0%
TAAACTGAGCATGAACACCT+TGG - chr5_2:61854045-61854064 None:intergenic 40.0%
TTACAGAGATTTACCAGAGC+TGG + chr5_2:61854324-61854343 Msa0780140:CDS 40.0%
TTTGACCTGGAAATTCATGC+CGG - chr5_2:61854486-61854505 None:intergenic 40.0%
TAGCTGTTTGCTCTATCTCT+TGG - chr5_2:61854529-61854548 None:intergenic 40.0%
AAGAGATAGAGCAAACAGCT+AGG + chr5_2:61854528-61854547 Msa0780140:CDS 40.0%
AGAGATAGAGCAAACAGCTA+GGG + chr5_2:61854529-61854548 Msa0780140:CDS 40.0%
GAACAAGGTAGACAGCTATA+TGG + chr5_2:61854870-61854889 Msa0780140:CDS 40.0%
ATCCAGCCTATTAGAAATGC+AGG + chr5_2:61854893-61854912 Msa0780140:CDS 40.0%
TACCTGCATTTCTAATAGGC+TGG - chr5_2:61854898-61854917 None:intergenic 40.0%
AAAACTAACTGAAGAGCAGC+TGG + chr5_2:61855053-61855072 Msa0780140:CDS 40.0%
TATATATGTCACCAACTGCC+AGG - chr5_2:61855158-61855177 None:intergenic 40.0%
!! TGGCAGTTGGTGACATATAT+AGG + chr5_2:61855157-61855176 Msa0780140:CDS 40.0%
!! AGGAAGTGTTTATCCCTACA+CGG - chr5_2:61855652-61855671 None:intergenic 40.0%
AAGAACAATGGCTATCCGAA+AGG + chr5_2:61855769-61855788 Msa0780140:intron 40.0%
ACAAAATGAGAGACAAGCAC+CGG + chr5_2:61856018-61856037 Msa0780140:exon 40.0%
! AAAGCGCCAACAAAAACAGT+AGG + chr5_2:61856205-61856224 Msa0780140:three_prime_UTR 40.0%
!! CAGGAAGACGGTCATTTTCT+GGG - chr5_2:61851275-61851294 None:intergenic 45.0%
CCTTCAATTCAGCAGGAAGA+CGG - chr5_2:61851287-61851306 None:intergenic 45.0%
TCAGTGACCTTCAATTCAGC+AGG - chr5_2:61851294-61851313 None:intergenic 45.0%
TATGCGAGGACTGTTACGAA+AGG + chr5_2:61851961-61851980 Msa0780140:CDS 45.0%
ATGCGAGGACTGTTACGAAA+GGG + chr5_2:61851962-61851981 Msa0780140:CDS 45.0%
GCATGGAAGAGAATGTAGAG+TGG - chr5_2:61852171-61852190 None:intergenic 45.0%
!! GTCCCGGAAAGTATTCTTGT+TGG + chr5_2:61852366-61852385 Msa0780140:CDS 45.0%
ACTTTCACACGCTGTAACAG+CGG + chr5_2:61852446-61852465 Msa0780140:CDS 45.0%
TGTTACTGACAGAGGACTAC+AGG + chr5_2:61853404-61853423 Msa0780140:CDS 45.0%
CGTTATAAAACGACTCGCAG+AGG - chr5_2:61853525-61853544 None:intergenic 45.0%
TGGAAGCAGGAAAATCTCCA+AGG + chr5_2:61854025-61854044 Msa0780140:CDS 45.0%
GCAATAGAATCATCCAGCTC+TGG - chr5_2:61854340-61854359 None:intergenic 45.0%
AAAAGTCACCTGTTGCACTG+TGG - chr5_2:61854386-61854405 None:intergenic 45.0%
ATTCTCCGGCATGAATTTCC+AGG + chr5_2:61854478-61854497 Msa0780140:intron 45.0%
ATCAAACAGAACCTGGCAGT+TGG + chr5_2:61855144-61855163 Msa0780140:CDS 45.0%
ATACGACGAGGAACGTGTAA+AGG + chr5_2:61855498-61855517 Msa0780140:CDS 45.0%
GGCTATCCGAAAGGATTACA+CGG + chr5_2:61855778-61855797 Msa0780140:intron 45.0%
! AAGGAGCTAAGGTGCTAGAA+TGG + chr5_2:61855965-61855984 Msa0780140:CDS 45.0%
!! AAGCACCGGCCAAACAAATT+AGG + chr5_2:61856032-61856051 Msa0780140:three_prime_UTR 45.0%
CTGCAAATGGAACTCTTTGC+AGG - chr5_2:61856247-61856266 None:intergenic 45.0%
ATGGAATGGGTGTCTGCAAA+TGG - chr5_2:61856260-61856279 None:intergenic 45.0%
!! AATTATAAAATACATATAAA+AGG - chr5_2:61853654-61853673 None:intergenic 5.0%
CTGTTTGATTGCTGCTGCCA+TGG + chr5_2:61851017-61851036 Msa0780140:exon 50.0%
AGTTCGAGTACAGAGCTCCA+TGG - chr5_2:61851037-61851056 None:intergenic 50.0%
GGAGAAGCTGAGACAGTGAA+GGG - chr5_2:61851219-61851238 None:intergenic 50.0%
AGGAGAAGCTGAGACAGTGA+AGG - chr5_2:61851220-61851239 None:intergenic 50.0%
!! GCAGGAAGACGGTCATTTTC+TGG - chr5_2:61851276-61851295 None:intergenic 50.0%
CCGTCTTCCTGCTGAATTGA+AGG + chr5_2:61851284-61851303 Msa0780140:CDS 50.0%
! TATTGCGCCGGCGAAATTTC+AGG - chr5_2:61851448-61851467 None:intergenic 50.0%
ATTTCGCCGGCGCAATAGTA+TGG + chr5_2:61851451-61851470 Msa0780140:intron 50.0%
TTTCGCCGGCGCAATAGTAT+GGG + chr5_2:61851452-61851471 Msa0780140:intron 50.0%
GTCTTCCCATACTATTGCGC+CGG - chr5_2:61851460-61851479 None:intergenic 50.0%
CTTGCACCTACACTCTTCCA+TGG - chr5_2:61851815-61851834 None:intergenic 50.0%
CCACATGCAATCTAACCTGC+AGG - chr5_2:61851926-61851945 None:intergenic 50.0%
CCTGCAGGTTAGATTGCATG+TGG + chr5_2:61851923-61851942 Msa0780140:intron 50.0%
GCAGGTTAGATTGCATGTGG+AGG + chr5_2:61851926-61851945 Msa0780140:intron 50.0%
TCGTCCTGGAAAAAAGGTCC+CGG + chr5_2:61852350-61852369 Msa0780140:CDS 50.0%
!!! CTTTCCGGGACCTTTTTTCC+AGG - chr5_2:61852357-61852376 None:intergenic 50.0%
!! AGAAGGCGTTACAAGTCAGC+TGG + chr5_2:61853369-61853388 Msa0780140:CDS 50.0%
GTTGCACTGTGGTACATCCA+GGG - chr5_2:61854375-61854394 None:intergenic 50.0%
TGTTGCACTGTGGTACATCC+AGG - chr5_2:61854376-61854395 None:intergenic 50.0%
TGGATGTACCACAGTGCAAC+AGG + chr5_2:61854375-61854394 Msa0780140:CDS 50.0%
CGAGGAACGTGTAAAGGAAC+AGG + chr5_2:61855504-61855523 Msa0780140:CDS 50.0%
!! GCATGTGGAGGTACCATCAC+TGG + chr5_2:61851938-61851957 Msa0780140:CDS 55.0%
GGTACCATCACTGGTATGCG+AGG + chr5_2:61851947-61851966 Msa0780140:CDS 55.0%
CAGTCCTCGCATACCAGTGA+TGG - chr5_2:61851954-61851973 None:intergenic 55.0%
CAGGTACCTGGATTTCGTCC+TGG + chr5_2:61852336-61852355 Msa0780140:intron 55.0%
GGTTACTGGAAGGGCTTTGC+AGG + chr5_2:61852946-61852965 Msa0780140:intron 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 61851001 61856511 61851001 ID=Msa0780140;Name=Msa0780140
chr5_2 mRNA 61851001 61856511 61851001 ID=Msa0780140-mRNA-1;Parent=Msa0780140;Name=Msa0780140-mRNA-1;_AED=0.12;_eAED=0.12;_QI=35|1|1|1|1|1|13|485|539
chr5_2 exon 61851001 61851335 61851001 ID=Msa0780140-mRNA-1:exon:18167;Parent=Msa0780140-mRNA-1
chr5_2 exon 61851930 61852013 61851930 ID=Msa0780140-mRNA-1:exon:18168;Parent=Msa0780140-mRNA-1
chr5_2 exon 61852339 61852467 61852339 ID=Msa0780140-mRNA-1:exon:18169;Parent=Msa0780140-mRNA-1
chr5_2 exon 61852947 61853035 61852947 ID=Msa0780140-mRNA-1:exon:18170;Parent=Msa0780140-mRNA-1
chr5_2 exon 61853242 61853425 61853242 ID=Msa0780140-mRNA-1:exon:18171;Parent=Msa0780140-mRNA-1
chr5_2 exon 61853717 61853804 61853717 ID=Msa0780140-mRNA-1:exon:18172;Parent=Msa0780140-mRNA-1
chr5_2 exon 61853912 61854066 61853912 ID=Msa0780140-mRNA-1:exon:18173;Parent=Msa0780140-mRNA-1
chr5_2 exon 61854304 61854396 61854304 ID=Msa0780140-mRNA-1:exon:18174;Parent=Msa0780140-mRNA-1
chr5_2 exon 61854500 61854592 61854500 ID=Msa0780140-mRNA-1:exon:18175;Parent=Msa0780140-mRNA-1
chr5_2 exon 61854834 61854914 61854834 ID=Msa0780140-mRNA-1:exon:18176;Parent=Msa0780140-mRNA-1
chr5_2 exon 61855045 61855194 61855045 ID=Msa0780140-mRNA-1:exon:18177;Parent=Msa0780140-mRNA-1
chr5_2 exon 61855430 61855525 61855430 ID=Msa0780140-mRNA-1:exon:18178;Parent=Msa0780140-mRNA-1
chr5_2 exon 61855949 61856511 61855949 ID=Msa0780140-mRNA-1:exon:18179;Parent=Msa0780140-mRNA-1
chr5_2 five_prime_UTR 61851001 61851035 61851001 ID=Msa0780140-mRNA-1:five_prime_utr;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61851036 61851335 61851036 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61851930 61852013 61851930 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61852339 61852467 61852339 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61852947 61853035 61852947 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61853242 61853425 61853242 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61853717 61853804 61853717 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61853912 61854066 61853912 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61854304 61854396 61854304 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61854500 61854592 61854500 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61854834 61854914 61854834 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61855045 61855194 61855045 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61855430 61855525 61855430 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 CDS 61855949 61856026 61855949 ID=Msa0780140-mRNA-1:cds;Parent=Msa0780140-mRNA-1
chr5_2 three_prime_UTR 61856027 61856511 61856027 ID=Msa0780140-mRNA-1:three_prime_utr;Parent=Msa0780140-mRNA-1
Gene Sequence

>Msa0780140

ATGGAGCTCTGTACTCGAACTTTCACAACTACTTCTCTTCTTTTCAACCCTTCTTTCTCTCTTCCTTCTTCTTCTTCTTCTTCTTCAAATTCTCTTCATCTTCATCTTCATTCCAAATTCAACTCCTTCAACCTCTCATCTTCTTTCATTCAACCTTCTCTTTTTCATCACACTTCTTCTCCCTTCACTGTCTCAGCTTCTCCTTCATCTCCTTCTTCTTCTTCAGTTGAACTTTTCCCAGAAAATGACCGTCTTCCTGCTGAATTGAAGGTCACTGAGACAAAGGAATCCAATTCCAGAGTTAGATTGCATGTGGAGGTACCATCACTGGTATGCGAGGACTGTTACGAAAGGGTCCTAGTTGAGTTTACAAAGTTCGCCAAGGTACCTGGATTTCGTCCTGGAAAAAAGGTCCCGGAAAGTATTCTTGTTGGTTATGTGGGGAGTAAAAATGTTCAAAAGGCTACAATCGAATCAATATTGAGGAGGACACTTTCACACGCTGTAACAGCGGTTACTGGAAGGGCTTTGCAGGATTCTATACGTATAGTTACTAAATTTTCTGATATGGAGGATACCTATTATTCTCTCGGATATCTTAGGTATGATGTGATTGTTGATGTTGCACCAGAAATTAAATGGATTTCTGATGATGCATACAAAAACTTGAAGGTTGTTGTTGAGATAGACAGTGAAATAGATGCTCACATAGCATCTGAAAAAGAATTTAGAAGGCGTTACAAGTCAGCTGGTGTACTGAAAGTTGTTACTGACAGAGGACTACAGGTCGGTGATGTTGTTGTACTTGACATCTCAGCAACGACCGTTGATCAAGAATCAAATATCAAAAATATTCCTTCTGCTGAAAGTAAAGGATTCAATTTTGATACAGAGGATGGTGAAATATTAGTACCAGGTTTCCTTGATTCTATAATTGGAATTGGTCGAGGCGAAACAAAGTCATTCCCCCTTGTTTTTCCTGAAACATGGAAGCAGGAAAATCTCCAAGGTGTTCATGCTCAGTTTACTGTTGAGTGCAAAGAACTTTTTTACAGAGATTTACCAGAGCTGGATGATTCTATTGCTGATAAACTTATCCCTGGATGTACCACAGTGCAACAGGTCAAAGACTTATTGTTAGAAAGATTCCAAGAGATAGAGCAAACAGCTAGGGAACAAGCAACTGATAATGCTATATTAGATCAGATTTCTAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGATGAACAAGGTAGACAGCTATATGGATCCAGCCTATTAGAAATGCAGACAAAAATAAAACTAACTGAAGAGCAGCTGGCTACTCTATCAAGTCCAAAGTCCGTGAATGAATATCTTGAGCATCATAAGGAAAATATTACAAATTTGATCAAACAGAACCTGGCAGTTGGTGACATATATAGGCGTGAAAATATGCAGCTTCCTACTGAAGACATCATCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAAACAAGAATACGACGAGGAACGTGTAAAGGAACAGGTTCAAGAAATACTAGAAGGAGCTAAGGTGCTAGAATGGTTGAGAGAACATGCAGAAGTTCAGTATATAACAAAATGA

Protein sequence

>Msa0780140

MELCTRTFTTTSLLFNPSFSLPSSSSSSSNSLHLHLHSKFNSFNLSSSFIQPSLFHHTSSPFTVSASPSSPSSSSVELFPENDRLPAELKVTETKESNSRVRLHVEVPSLVCEDCYERVLVEFTKFAKVPGFRPGKKVPESILVGYVGSKNVQKATIESILRRTLSHAVTAVTGRALQDSIRIVTKFSDMEDTYYSLGYLRYDVIVDVAPEIKWISDDAYKNLKVVVEIDSEIDAHIASEKEFRRRYKSAGVLKVVTDRGLQVGDVVVLDISATTVDQESNIKNIPSAESKGFNFDTEDGEILVPGFLDSIIGIGRGETKSFPLVFPETWKQENLQGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVQQVKDLLLERFQEIEQTAREQATDNAILDQISKMVEVDIPQSLFDEQGRQLYGSSLLEMQTKIKLTEEQLATLSSPKSVNEYLEHHKENITNLIKQNLAVGDIYRRENMQLPTEDIIKEVENSIAEFKRQKQEYDEERVKEQVQEILEGAKVLEWLREHAEVQYITK*