Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701960 | XP_003629880.1 | 97.245 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701960 | sp|Q9C7N4|GDL15_ARATH | 67.582 | 364 | 114 | 2 | 3 | 363 | 1 | 363 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701960 | G7L7Z9 | 97.245 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0618170 | Msa0701960 | 0.938863 | 3.327815e-99 | -8.615850e-47 |
| Msa0641620 | Msa0701960 | 0.823453 | 1.374187e-53 | -8.615850e-47 |
| Msa0645930 | Msa0701960 | 0.813354 | 2.670124e-51 | -8.615850e-47 |
| Msa0669840 | Msa0701960 | 0.806971 | 6.346602e-50 | -8.615850e-47 |
| Msa0688500 | Msa0701960 | 0.804672 | 1.930952e-49 | -8.615850e-47 |
| Msa0701960 | Msa0843290 | 0.801916 | 7.184621e-49 | -8.615850e-47 |
| Msa0701960 | Msa0867350 | 0.803827 | 2.894395e-49 | -8.615850e-47 |
| Msa0701960 | Msa0872310 | 0.809038 | 2.304969e-50 | -8.615850e-47 |
| Msa0701960 | Msa0929870 | 0.805621 | 1.221714e-49 | -8.615850e-47 |
| Msa0701960 | Msa0951460 | 0.804511 | 2.085760e-49 | -8.615850e-47 |
| Msa0701960 | Msa1037900 | 0.817392 | 3.377915e-52 | -8.615850e-47 |
| Msa0701960 | Msa1037910 | 0.810769 | 9.774122e-51 | -8.615850e-47 |
| Msa0701960 | Msa1041530 | 0.807044 | 6.125732e-50 | -8.615850e-47 |
| Msa0701960 | Msa1123880 | 0.803058 | 4.178743e-49 | -8.615850e-47 |
| Msa0701960 | Msa1127140 | 0.804125 | 2.510204e-49 | -8.615850e-47 |
| Msa0701960 | Msa1129960 | 0.820486 | 6.686896e-53 | -8.615850e-47 |
| Msa0701960 | Msa1130010 | 0.801132 | 1.039861e-48 | -8.615850e-47 |
| Msa0701960 | Msa1420060 | 0.814817 | 1.270214e-51 | -8.615850e-47 |
| Msa0701960 | Msa1421550 | 0.803638 | 3.169196e-49 | -8.615850e-47 |
| Msa0464540 | Msa0701960 | 0.802688 | 4.982655e-49 | -8.615850e-47 |
| Msa0351510 | Msa0701960 | 0.812915 | 3.333875e-51 | -8.615850e-47 |
| Msa0543850 | Msa0701960 | 0.800001 | 1.768369e-48 | -8.615850e-47 |
| Msa0565590 | Msa0701960 | 0.813228 | 2.847072e-51 | -8.615850e-47 |
| Msa0578320 | Msa0701960 | 0.919350 | 5.027515e-87 | -8.615850e-47 |
| Msa0601110 | Msa0701960 | 0.814308 | 1.645924e-51 | -8.615850e-47 |
| Msa0601120 | Msa0701960 | 0.809397 | 1.930754e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701960 | MtrunA17_Chr8g0380041 | 97.245 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 0.0 | 723 |
| Msa0701960 | MtrunA17_Chr3g0086641 | 74.444 | 360 | 89 | 3 | 6 | 363 | 12 | 370 | 0.0 | 556 |
| Msa0701960 | MtrunA17_Chr2g0285061 | 71.781 | 365 | 101 | 2 | 1 | 363 | 1 | 365 | 0.0 | 540 |
| Msa0701960 | MtrunA17_Chr3g0077571 | 52.975 | 353 | 159 | 7 | 12 | 363 | 11 | 357 | 1.04e-128 | 373 |
| Msa0701960 | MtrunA17_Chr3g0077581 | 57.059 | 340 | 140 | 5 | 28 | 363 | 33 | 370 | 1.73e-128 | 373 |
| Msa0701960 | MtrunA17_Chr8g0380031 | 48.276 | 348 | 156 | 6 | 23 | 363 | 76 | 406 | 2.97e-109 | 325 |
| Msa0701960 | MtrunA17_Chr2g0284991 | 47.139 | 367 | 179 | 7 | 3 | 362 | 1 | 359 | 5.99e-109 | 323 |
| Msa0701960 | MtrunA17_Chr3g0085881 | 48.071 | 337 | 161 | 6 | 27 | 362 | 29 | 352 | 3.70e-108 | 320 |
| Msa0701960 | MtrunA17_Chr2g0284951 | 46.995 | 366 | 178 | 7 | 1 | 362 | 1 | 354 | 7.49e-108 | 320 |
| Msa0701960 | MtrunA17_Chr2g0284921 | 47.674 | 344 | 167 | 6 | 24 | 363 | 27 | 361 | 6.61e-107 | 318 |
| Msa0701960 | MtrunA17_Chr2g0285001 | 47.606 | 355 | 174 | 8 | 12 | 362 | 14 | 360 | 6.64e-106 | 315 |
| Msa0701960 | MtrunA17_Chr3g0131321 | 43.666 | 371 | 191 | 7 | 7 | 362 | 1 | 368 | 8.47e-106 | 316 |
| Msa0701960 | MtrunA17_Chr4g0017431 | 43.014 | 365 | 200 | 6 | 4 | 363 | 2 | 363 | 8.42e-104 | 310 |
| Msa0701960 | MtrunA17_Chr2g0284941 | 45.652 | 368 | 160 | 10 | 4 | 362 | 2 | 338 | 5.14e-101 | 302 |
| Msa0701960 | MtrunA17_Chr5g0434621 | 44.828 | 319 | 165 | 9 | 33 | 346 | 27 | 339 | 3.18e-86 | 265 |
| Msa0701960 | MtrunA17_Chr2g0294301 | 39.833 | 359 | 207 | 7 | 8 | 362 | 14 | 367 | 4.23e-85 | 262 |
| Msa0701960 | MtrunA17_Chr2g0294311 | 37.736 | 371 | 214 | 7 | 5 | 362 | 6 | 372 | 2.86e-84 | 260 |
| Msa0701960 | MtrunA17_Chr4g0068441 | 40.118 | 339 | 196 | 6 | 28 | 362 | 32 | 367 | 3.78e-81 | 252 |
| Msa0701960 | MtrunA17_Chr7g0275011 | 38.095 | 357 | 213 | 6 | 11 | 363 | 14 | 366 | 1.51e-74 | 235 |
| Msa0701960 | MtrunA17_Chr7g0274991 | 36.088 | 363 | 226 | 5 | 4 | 363 | 6 | 365 | 8.24e-74 | 233 |
| Msa0701960 | MtrunA17_Chr7g0275021 | 36.338 | 355 | 218 | 6 | 13 | 363 | 16 | 366 | 8.94e-73 | 230 |
| Msa0701960 | MtrunA17_Chr8g0374101 | 36.565 | 361 | 206 | 8 | 15 | 363 | 27 | 376 | 1.08e-71 | 228 |
| Msa0701960 | MtrunA17_Chr5g0396511 | 36.036 | 333 | 206 | 5 | 33 | 361 | 48 | 377 | 6.97e-71 | 226 |
| Msa0701960 | MtrunA17_Chr1g0182811 | 36.639 | 363 | 222 | 6 | 6 | 363 | 8 | 367 | 1.76e-70 | 224 |
| Msa0701960 | MtrunA17_Chr1g0189901 | 38.801 | 317 | 187 | 5 | 32 | 344 | 32 | 345 | 2.20e-70 | 224 |
| Msa0701960 | MtrunA17_Chr1g0189931 | 37.764 | 331 | 198 | 6 | 32 | 358 | 33 | 359 | 1.96e-69 | 222 |
| Msa0701960 | MtrunA17_Chr7g0275001 | 35.754 | 358 | 222 | 6 | 11 | 363 | 4 | 358 | 2.63e-69 | 221 |
| Msa0701960 | MtrunA17_Chr3g0092131 | 38.235 | 340 | 192 | 10 | 10 | 340 | 3 | 333 | 3.52e-69 | 221 |
| Msa0701960 | MtrunA17_Chr4g0008851 | 36.202 | 337 | 207 | 6 | 32 | 363 | 33 | 366 | 1.10e-67 | 217 |
| Msa0701960 | MtrunA17_Chr3g0099161 | 36.216 | 370 | 210 | 10 | 8 | 363 | 69 | 426 | 6.65e-67 | 217 |
| Msa0701960 | MtrunA17_Chr4g0060811 | 38.924 | 316 | 178 | 8 | 33 | 340 | 29 | 337 | 1.19e-66 | 214 |
| Msa0701960 | MtrunA17_Chr1g0156911 | 36.127 | 346 | 203 | 8 | 1 | 334 | 1 | 340 | 2.74e-66 | 213 |
| Msa0701960 | MtrunA17_Chr6g0457921 | 37.202 | 336 | 199 | 7 | 11 | 339 | 9 | 339 | 7.56e-66 | 213 |
| Msa0701960 | MtrunA17_Chr3g0099151 | 36.267 | 375 | 208 | 11 | 6 | 363 | 62 | 422 | 1.09e-65 | 214 |
| Msa0701960 | MtrunA17_Chr1g0156921 | 34.770 | 348 | 202 | 7 | 1 | 334 | 10 | 346 | 3.01e-65 | 211 |
| Msa0701960 | MtrunA17_Chr5g0444401 | 35.440 | 364 | 212 | 10 | 11 | 360 | 5 | 359 | 8.31e-65 | 209 |
| Msa0701960 | MtrunA17_Chr1g0156901 | 36.774 | 310 | 188 | 5 | 29 | 334 | 48 | 353 | 3.69e-62 | 203 |
| Msa0701960 | MtrunA17_Chr1g0156931 | 35.045 | 331 | 205 | 6 | 7 | 333 | 18 | 342 | 4.10e-62 | 202 |
| Msa0701960 | MtrunA17_Chr4g0027521 | 36.364 | 352 | 199 | 10 | 16 | 355 | 12 | 350 | 8.60e-62 | 201 |
| Msa0701960 | MtrunA17_Chr1g0189891 | 35.440 | 364 | 213 | 12 | 9 | 363 | 6 | 356 | 1.12e-60 | 199 |
| Msa0701960 | MtrunA17_Chr7g0215961 | 33.144 | 353 | 218 | 7 | 13 | 363 | 16 | 352 | 1.61e-60 | 198 |
| Msa0701960 | MtrunA17_Chr2g0320671 | 35.312 | 337 | 204 | 8 | 10 | 340 | 12 | 340 | 1.75e-60 | 198 |
| Msa0701960 | MtrunA17_Chr1g0156891 | 35.736 | 333 | 202 | 7 | 10 | 334 | 19 | 347 | 2.54e-60 | 198 |
| Msa0701960 | MtrunA17_Chr5g0438621 | 34.524 | 336 | 207 | 7 | 12 | 340 | 11 | 340 | 2.61e-60 | 197 |
| Msa0701960 | MtrunA17_Chr3g0120861 | 36.364 | 319 | 192 | 7 | 28 | 340 | 35 | 348 | 1.85e-59 | 196 |
| Msa0701960 | MtrunA17_Chr3g0085231 | 34.511 | 368 | 216 | 9 | 1 | 362 | 1 | 349 | 3.19e-59 | 195 |
| Msa0701960 | MtrunA17_Chr3g0142921 | 34.412 | 340 | 208 | 8 | 6 | 334 | 5 | 340 | 4.76e-59 | 194 |
| Msa0701960 | MtrunA17_Chr5g0438641 | 36.391 | 338 | 198 | 9 | 12 | 341 | 15 | 343 | 1.02e-58 | 194 |
| Msa0701960 | MtrunA17_Chr2g0330781 | 37.538 | 325 | 185 | 10 | 26 | 340 | 26 | 342 | 2.51e-58 | 192 |
| Msa0701960 | MtrunA17_Chr5g0438631 | 34.311 | 341 | 212 | 8 | 7 | 340 | 4 | 339 | 2.67e-58 | 192 |
| Msa0701960 | MtrunA17_Chr8g0341001 | 36.070 | 341 | 201 | 10 | 10 | 340 | 10 | 343 | 7.19e-58 | 191 |
| Msa0701960 | MtrunA17_Chr3g0099231 | 32.337 | 368 | 216 | 12 | 11 | 363 | 12 | 361 | 1.03e-57 | 192 |
| Msa0701960 | MtrunA17_Chr5g0405831 | 34.006 | 347 | 214 | 8 | 6 | 341 | 14 | 356 | 3.66e-57 | 190 |
| Msa0701960 | MtrunA17_Chr3g0105401 | 34.402 | 343 | 213 | 8 | 6 | 340 | 1 | 339 | 1.76e-56 | 187 |
| Msa0701960 | MtrunA17_Chr3g0142941 | 33.548 | 310 | 198 | 5 | 29 | 334 | 45 | 350 | 5.77e-56 | 187 |
| Msa0701960 | MtrunA17_Chr8g0371491 | 34.870 | 347 | 207 | 9 | 6 | 340 | 7 | 346 | 1.00e-55 | 186 |
| Msa0701960 | MtrunA17_Chr5g0432101 | 35.647 | 317 | 191 | 8 | 33 | 341 | 35 | 346 | 4.16e-55 | 184 |
| Msa0701960 | MtrunA17_Chr5g0405821 | 33.046 | 348 | 217 | 9 | 6 | 341 | 14 | 357 | 5.46e-54 | 182 |
| Msa0701960 | MtrunA17_Chr2g0283191 | 30.682 | 352 | 219 | 9 | 4 | 335 | 6 | 352 | 6.89e-54 | 181 |
| Msa0701960 | MtrunA17_Chr8g0371481 | 31.595 | 326 | 215 | 6 | 30 | 350 | 40 | 362 | 1.45e-52 | 178 |
| Msa0701960 | MtrunA17_Chr5g0420811 | 32.092 | 349 | 209 | 11 | 10 | 348 | 10 | 340 | 1.19e-51 | 175 |
| Msa0701960 | MtrunA17_Chr8g0370951 | 31.937 | 382 | 225 | 11 | 1 | 362 | 1 | 367 | 2.54e-51 | 175 |
| Msa0701960 | MtrunA17_Chr8g0371471 | 30.982 | 326 | 216 | 6 | 30 | 350 | 40 | 361 | 1.12e-50 | 173 |
| Msa0701960 | MtrunA17_Chr5g0437421 | 32.817 | 323 | 201 | 7 | 28 | 339 | 29 | 346 | 1.41e-48 | 167 |
| Msa0701960 | MtrunA17_Chr4g0046151 | 30.571 | 350 | 222 | 10 | 7 | 342 | 15 | 357 | 3.04e-48 | 167 |
| Msa0701960 | MtrunA17_Chr6g0459921 | 35.223 | 247 | 155 | 4 | 118 | 363 | 119 | 361 | 1.21e-47 | 165 |
| Msa0701960 | MtrunA17_Chr6g0455661 | 37.395 | 238 | 133 | 4 | 138 | 363 | 239 | 472 | 2.49e-47 | 167 |
| Msa0701960 | MtrunA17_Chr6g0455661 | 48.438 | 128 | 64 | 2 | 1 | 127 | 1 | 127 | 1.60e-27 | 112 |
| Msa0701960 | MtrunA17_Chr2g0301641 | 35.256 | 312 | 183 | 10 | 33 | 333 | 45 | 348 | 1.84e-46 | 162 |
| Msa0701960 | MtrunA17_Chr2g0284931 | 36.626 | 243 | 127 | 5 | 122 | 363 | 4 | 220 | 1.68e-45 | 155 |
| Msa0701960 | MtrunA17_Chr8g0344941 | 30.530 | 321 | 209 | 7 | 33 | 345 | 43 | 357 | 5.75e-45 | 158 |
| Msa0701960 | MtrunA17_Chr8g0349341 | 31.889 | 323 | 199 | 8 | 33 | 346 | 39 | 349 | 4.84e-42 | 150 |
| Msa0701960 | MtrunA17_Chr1g0157001 | 31.546 | 317 | 196 | 7 | 36 | 346 | 41 | 342 | 1.17e-41 | 149 |
| Msa0701960 | MtrunA17_Chr8g0370981 | 29.197 | 411 | 226 | 11 | 8 | 361 | 15 | 417 | 1.82e-41 | 150 |
| Msa0701960 | MtrunA17_Chr8g0349321 | 31.481 | 324 | 199 | 9 | 33 | 346 | 39 | 349 | 7.07e-41 | 147 |
| Msa0701960 | MtrunA17_Chr8g0344931 | 30.473 | 338 | 213 | 12 | 33 | 363 | 39 | 361 | 4.75e-37 | 137 |
| Msa0701960 | MtrunA17_Chr1g0160101 | 27.487 | 382 | 230 | 10 | 9 | 358 | 20 | 386 | 5.48e-35 | 132 |
| Msa0701960 | MtrunA17_Chr8g0349301 | 29.412 | 323 | 199 | 9 | 1 | 310 | 1 | 307 | 2.53e-33 | 126 |
| Msa0701960 | MtrunA17_Chr1g0160031 | 29.330 | 358 | 219 | 11 | 7 | 339 | 13 | 361 | 3.05e-33 | 127 |
| Msa0701960 | MtrunA17_Chr2g0285041 | 44.355 | 124 | 68 | 1 | 83 | 205 | 1 | 124 | 4.95e-33 | 120 |
| Msa0701960 | MtrunA17_Chr8g0370961 | 30.672 | 238 | 150 | 6 | 128 | 361 | 17 | 243 | 7.92e-33 | 122 |
| Msa0701960 | MtrunA17_Chr1g0160011 | 27.577 | 359 | 225 | 10 | 7 | 339 | 13 | 362 | 1.13e-31 | 123 |
| Msa0701960 | MtrunA17_Chr8g0349331 | 26.741 | 359 | 208 | 9 | 1 | 346 | 1 | 317 | 1.59e-31 | 121 |
| Msa0701960 | MtrunA17_Chr5g0440501 | 28.455 | 246 | 164 | 5 | 128 | 362 | 6 | 250 | 1.71e-31 | 119 |
| Msa0701960 | MtrunA17_Chr7g0229591 | 38.144 | 194 | 109 | 6 | 10 | 199 | 12 | 198 | 9.85e-31 | 116 |
| Msa0701960 | MtrunA17_Chr1g0159991 | 27.371 | 369 | 226 | 10 | 1 | 339 | 4 | 360 | 1.06e-30 | 120 |
| Msa0701960 | MtrunA17_Chr7g0254461 | 27.222 | 360 | 224 | 10 | 28 | 358 | 40 | 390 | 1.39e-30 | 120 |
| Msa0701960 | MtrunA17_Chr8g0381581 | 27.568 | 370 | 220 | 12 | 6 | 342 | 16 | 370 | 3.67e-29 | 116 |
| Msa0701960 | MtrunA17_Chr4g0027571 | 31.905 | 210 | 139 | 3 | 131 | 339 | 3 | 209 | 1.56e-28 | 110 |
| Msa0701960 | MtrunA17_Chr6g0450731 | 26.453 | 344 | 217 | 9 | 30 | 355 | 32 | 357 | 2.76e-27 | 110 |
| Msa0701960 | MtrunA17_Chr6g0450721 | 27.807 | 374 | 232 | 12 | 1 | 355 | 1 | 355 | 3.21e-27 | 110 |
| Msa0701960 | MtrunA17_Chr1g0159981 | 25.464 | 377 | 245 | 10 | 7 | 356 | 20 | 387 | 4.61e-27 | 110 |
| Msa0701960 | MtrunA17_Chr8g0347751 | 27.083 | 336 | 209 | 9 | 33 | 341 | 38 | 364 | 4.65e-27 | 110 |
| Msa0701960 | MtrunA17_Chr7g0275291 | 24.468 | 376 | 242 | 11 | 7 | 354 | 9 | 370 | 4.97e-27 | 110 |
| Msa0701960 | MtrunA17_Chr7g0271551 | 27.647 | 340 | 214 | 10 | 22 | 346 | 29 | 351 | 1.27e-26 | 108 |
| Msa0701960 | MtrunA17_Chr4g0057991 | 26.124 | 356 | 231 | 11 | 6 | 340 | 12 | 356 | 2.79e-26 | 108 |
| Msa0701960 | MtrunA17_Chr2g0283511 | 27.945 | 365 | 228 | 12 | 1 | 340 | 1 | 355 | 3.21e-26 | 108 |
| Msa0701960 | MtrunA17_Chr3g0104821 | 25.959 | 339 | 205 | 12 | 33 | 341 | 46 | 368 | 5.03e-26 | 107 |
| Msa0701960 | MtrunA17_Chr7g0273101 | 26.870 | 361 | 227 | 10 | 30 | 363 | 28 | 378 | 1.02e-25 | 106 |
| Msa0701960 | MtrunA17_Chr1g0159971 | 28.402 | 338 | 196 | 11 | 33 | 339 | 49 | 371 | 8.08e-25 | 104 |
| Msa0701960 | MtrunA17_Chr6g0469511 | 44.348 | 115 | 59 | 3 | 26 | 136 | 25 | 138 | 2.53e-24 | 97.1 |
| Msa0701960 | MtrunA17_Chr7g0226941 | 27.401 | 354 | 218 | 11 | 30 | 355 | 32 | 374 | 4.17e-24 | 102 |
| Msa0701960 | MtrunA17_Chr6g0450701 | 29.326 | 341 | 200 | 12 | 28 | 342 | 36 | 361 | 8.56e-24 | 101 |
| Msa0701960 | MtrunA17_Chr4g0027561 | 45.690 | 116 | 56 | 3 | 10 | 121 | 12 | 124 | 1.07e-23 | 95.5 |
| Msa0701960 | MtrunA17_Chr2g0301581 | 26.374 | 364 | 222 | 14 | 1 | 341 | 1 | 341 | 4.34e-23 | 99.0 |
| Msa0701960 | MtrunA17_Chr7g0226911 | 22.997 | 387 | 244 | 10 | 10 | 355 | 7 | 380 | 6.60e-23 | 98.6 |
| Msa0701960 | MtrunA17_Chr7g0226931 | 23.077 | 403 | 249 | 12 | 10 | 363 | 10 | 400 | 7.37e-23 | 99.0 |
| Msa0701960 | MtrunA17_Chr2g0317261 | 26.099 | 364 | 215 | 14 | 7 | 341 | 1 | 339 | 9.18e-23 | 97.8 |
| Msa0701960 | MtrunA17_Chr6g0450711 | 26.593 | 361 | 206 | 13 | 30 | 355 | 121 | 457 | 1.01e-22 | 99.0 |
| Msa0701960 | MtrunA17_Chr2g0317271 | 26.374 | 364 | 214 | 14 | 7 | 341 | 1 | 339 | 1.86e-22 | 97.1 |
| Msa0701960 | MtrunA17_Chr8g0352901 | 26.870 | 361 | 228 | 10 | 13 | 345 | 6 | 358 | 2.42e-22 | 97.1 |
| Msa0701960 | MtrunA17_Chr2g0301541 | 26.099 | 364 | 223 | 14 | 1 | 341 | 1 | 341 | 6.25e-22 | 95.5 |
| Msa0701960 | MtrunA17_Chr0c01g0489581 | 25.691 | 362 | 217 | 13 | 7 | 341 | 3 | 339 | 8.18e-22 | 95.1 |
| Msa0701960 | MtrunA17_Chr0c01g0489571 | 25.691 | 362 | 217 | 13 | 7 | 341 | 3 | 339 | 1.77e-21 | 94.4 |
| Msa0701960 | MtrunA17_Chr2g0283481 | 25.348 | 359 | 233 | 13 | 6 | 340 | 22 | 369 | 1.77e-21 | 94.7 |
| Msa0701960 | MtrunA17_Chr2g0321991 | 46.847 | 111 | 51 | 5 | 10 | 113 | 10 | 119 | 6.60e-21 | 87.4 |
| Msa0701960 | MtrunA17_Chr3g0112821 | 25.617 | 324 | 217 | 10 | 33 | 341 | 32 | 346 | 6.71e-21 | 92.8 |
| Msa0701960 | MtrunA17_Chr7g0229581 | 34.028 | 144 | 94 | 1 | 206 | 348 | 8 | 151 | 8.65e-21 | 88.2 |
| Msa0701960 | MtrunA17_Chr1g0189911 | 29.577 | 142 | 99 | 1 | 217 | 358 | 1 | 141 | 9.26e-21 | 87.8 |
| Msa0701960 | MtrunA17_Chr1g0191461 | 26.239 | 343 | 209 | 11 | 30 | 342 | 30 | 358 | 1.02e-20 | 92.4 |
| Msa0701960 | MtrunA17_Chr1g0178941 | 24.768 | 323 | 200 | 12 | 33 | 335 | 42 | 341 | 1.12e-20 | 92.0 |
| Msa0701960 | MtrunA17_Chr2g0283501 | 26.437 | 348 | 222 | 13 | 13 | 336 | 13 | 350 | 2.06e-20 | 91.3 |
| Msa0701960 | MtrunA17_Chr1g0178931 | 26.562 | 320 | 190 | 14 | 33 | 335 | 39 | 330 | 2.39e-20 | 90.9 |
| Msa0701960 | MtrunA17_Chr3g0093031 | 25.373 | 335 | 209 | 13 | 33 | 341 | 32 | 351 | 4.29e-19 | 87.4 |
| Msa0701960 | MtrunA17_Chr1g0189921 | 48.958 | 96 | 44 | 3 | 31 | 122 | 31 | 125 | 1.03e-18 | 82.0 |
| Msa0701960 | MtrunA17_Chr7g0228261 | 41.111 | 90 | 52 | 1 | 274 | 363 | 4 | 92 | 3.70e-18 | 79.0 |
| Msa0701960 | MtrunA17_Chr7g0266061 | 26.433 | 314 | 199 | 12 | 33 | 335 | 44 | 336 | 4.93e-18 | 84.3 |
| Msa0701960 | MtrunA17_Chr1g0198351 | 26.814 | 317 | 192 | 13 | 33 | 335 | 45 | 335 | 4.32e-17 | 81.6 |
| Msa0701960 | MtrunA17_Chr8g0370971 | 45.000 | 100 | 47 | 2 | 30 | 121 | 37 | 136 | 8.19e-17 | 77.4 |
| Msa0701960 | MtrunA17_Chr2g0283531 | 26.048 | 334 | 210 | 15 | 33 | 341 | 33 | 354 | 1.21e-16 | 80.5 |
| Msa0701960 | MtrunA17_Chr8g0339251 | 27.244 | 312 | 197 | 10 | 13 | 310 | 6 | 301 | 3.46e-16 | 78.6 |
| Msa0701960 | MtrunA17_Chr2g0285051 | 63.793 | 58 | 20 | 1 | 28 | 84 | 33 | 90 | 3.05e-15 | 71.6 |
| Msa0701960 | MtrunA17_Chr3g0112691 | 25.519 | 337 | 204 | 12 | 33 | 341 | 32 | 349 | 4.06e-15 | 75.9 |
| Msa0701960 | MtrunA17_Chr4g0018571 | 34.862 | 109 | 70 | 1 | 239 | 346 | 64 | 172 | 4.10e-15 | 72.8 |
| Msa0701960 | MtrunA17_Chr2g0301591 | 26.316 | 304 | 188 | 12 | 1 | 289 | 1 | 283 | 1.65e-14 | 73.2 |
| Msa0701960 | MtrunA17_Chr3g0096551 | 23.429 | 350 | 209 | 13 | 33 | 341 | 31 | 362 | 3.52e-14 | 73.2 |
| Msa0701960 | MtrunA17_Chr2g0308201 | 44.048 | 84 | 46 | 1 | 1 | 83 | 5 | 88 | 1.68e-13 | 65.9 |
| Msa0701960 | MtrunA17_Chr3g0104831 | 22.794 | 272 | 168 | 9 | 97 | 341 | 31 | 287 | 1.82e-13 | 70.5 |
| Msa0701960 | MtrunA17_Chr4g0018561 | 58.182 | 55 | 21 | 1 | 26 | 78 | 25 | 79 | 2.05e-13 | 65.9 |
| Msa0701960 | MtrunA17_Chr2g0301551 | 24.555 | 281 | 172 | 10 | 80 | 341 | 38 | 297 | 7.15e-13 | 68.6 |
| Msa0701960 | MtrunA17_Chr2g0285031 | 45.946 | 74 | 36 | 3 | 290 | 362 | 7 | 77 | 1.02e-12 | 63.2 |
| Msa0701960 | MtrunA17_Chr1g0198391 | 23.167 | 341 | 194 | 11 | 33 | 335 | 35 | 345 | 1.23e-12 | 68.6 |
| Msa0701960 | MtrunA17_Chr2g0284981 | 41.026 | 78 | 36 | 3 | 289 | 362 | 8 | 79 | 1.21e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0701960 | AT1G29670.2 | 67.213 | 366 | 116 | 2 | 1 | 363 | 67 | 431 | 0.0 | 521 |
| Msa0701960 | AT1G29670.1 | 67.582 | 364 | 114 | 2 | 3 | 363 | 1 | 363 | 0.0 | 518 |
| Msa0701960 | AT5G45670.1 | 68.258 | 356 | 112 | 1 | 9 | 363 | 7 | 362 | 0.0 | 516 |
| Msa0701960 | AT4G18970.1 | 72.861 | 339 | 91 | 1 | 26 | 363 | 23 | 361 | 0.0 | 514 |
| Msa0701960 | AT4G18970.2 | 72.647 | 340 | 92 | 1 | 25 | 363 | 22 | 361 | 0.0 | 514 |
| Msa0701960 | AT1G29660.1 | 67.887 | 355 | 114 | 0 | 9 | 363 | 10 | 364 | 0.0 | 513 |
| Msa0701960 | AT1G33811.1 | 51.882 | 372 | 168 | 6 | 1 | 363 | 1 | 370 | 3.47e-129 | 375 |
| Msa0701960 | AT1G71691.2 | 50.294 | 340 | 163 | 6 | 25 | 363 | 49 | 383 | 1.21e-117 | 346 |
| Msa0701960 | AT5G08460.1 | 46.027 | 365 | 187 | 6 | 6 | 363 | 24 | 385 | 6.97e-112 | 332 |
| Msa0701960 | AT5G15720.1 | 48.680 | 341 | 169 | 5 | 27 | 363 | 26 | 364 | 1.95e-110 | 327 |
| Msa0701960 | AT1G71250.1 | 45.125 | 359 | 190 | 6 | 9 | 363 | 18 | 373 | 1.56e-105 | 315 |
| Msa0701960 | AT2G19010.1 | 45.161 | 341 | 161 | 8 | 28 | 362 | 27 | 347 | 1.75e-97 | 293 |
| Msa0701960 | AT2G19010.2 | 45.161 | 341 | 161 | 8 | 28 | 362 | 57 | 377 | 3.19e-97 | 294 |
| Msa0701960 | AT2G19050.1 | 45.029 | 342 | 162 | 7 | 28 | 363 | 28 | 349 | 2.91e-96 | 290 |
| Msa0701960 | AT2G19060.1 | 43.266 | 349 | 173 | 8 | 3 | 345 | 6 | 335 | 4.23e-91 | 277 |
| Msa0701960 | AT1G71691.1 | 46.127 | 284 | 148 | 5 | 80 | 363 | 4 | 282 | 2.97e-89 | 270 |
| Msa0701960 | AT4G30140.1 | 46.108 | 334 | 162 | 7 | 28 | 360 | 30 | 346 | 3.74e-88 | 270 |
| Msa0701960 | AT1G71691.3 | 49.813 | 267 | 129 | 5 | 25 | 290 | 49 | 311 | 3.41e-83 | 256 |
| Msa0701960 | AT5G15720.3 | 44.792 | 288 | 153 | 5 | 80 | 363 | 48 | 333 | 1.81e-81 | 252 |
| Msa0701960 | AT2G19050.2 | 47.547 | 265 | 123 | 4 | 28 | 291 | 28 | 277 | 2.64e-81 | 249 |
| Msa0701960 | AT5G15720.2 | 48.134 | 268 | 134 | 4 | 27 | 290 | 26 | 292 | 3.48e-79 | 245 |
| Msa0701960 | AT5G37690.1 | 40.407 | 344 | 194 | 8 | 6 | 344 | 2 | 339 | 9.74e-78 | 243 |
| Msa0701960 | AT2G23540.1 | 39.359 | 343 | 191 | 7 | 33 | 363 | 50 | 387 | 5.62e-77 | 242 |
| Msa0701960 | AT5G33370.1 | 38.438 | 333 | 197 | 6 | 32 | 360 | 31 | 359 | 1.97e-74 | 235 |
| Msa0701960 | AT3G50400.1 | 39.474 | 342 | 193 | 9 | 33 | 363 | 36 | 374 | 1.48e-73 | 233 |
| Msa0701960 | AT5G37690.2 | 38.953 | 344 | 191 | 9 | 6 | 344 | 2 | 331 | 5.63e-73 | 231 |
| Msa0701960 | AT4G10950.2 | 36.176 | 340 | 210 | 5 | 27 | 362 | 67 | 403 | 5.91e-73 | 232 |
| Msa0701960 | AT4G10950.1 | 35.882 | 340 | 207 | 6 | 27 | 362 | 67 | 399 | 6.57e-70 | 224 |
| Msa0701960 | AT3G04290.1 | 37.168 | 339 | 201 | 7 | 27 | 358 | 23 | 356 | 1.39e-68 | 220 |
| Msa0701960 | AT4G28780.1 | 37.313 | 335 | 204 | 5 | 32 | 363 | 32 | 363 | 2.77e-67 | 216 |
| Msa0701960 | AT1G74460.1 | 37.278 | 338 | 198 | 10 | 10 | 340 | 3 | 333 | 7.33e-65 | 210 |
| Msa0701960 | AT3G53100.1 | 37.539 | 317 | 189 | 6 | 29 | 340 | 27 | 339 | 3.38e-63 | 206 |
| Msa0701960 | AT5G18430.1 | 35.514 | 321 | 202 | 3 | 32 | 348 | 29 | 348 | 1.23e-62 | 204 |
| Msa0701960 | AT5G41890.1 | 36.676 | 349 | 197 | 10 | 33 | 363 | 33 | 375 | 2.10e-62 | 204 |
| Msa0701960 | AT5G03820.2 | 35.897 | 351 | 209 | 9 | 3 | 341 | 28 | 374 | 6.14e-62 | 203 |
| Msa0701960 | AT5G03820.1 | 36.023 | 347 | 206 | 9 | 7 | 341 | 4 | 346 | 2.20e-61 | 201 |
| Msa0701960 | AT2G04570.1 | 35.429 | 350 | 212 | 8 | 8 | 350 | 6 | 348 | 2.25e-61 | 201 |
| Msa0701960 | AT5G03810.1 | 36.550 | 342 | 206 | 8 | 7 | 341 | 5 | 342 | 6.33e-61 | 199 |
| Msa0701960 | AT5G22810.1 | 34.473 | 351 | 215 | 9 | 1 | 340 | 1 | 347 | 1.83e-60 | 199 |
| Msa0701960 | AT5G55050.1 | 37.462 | 331 | 187 | 10 | 18 | 335 | 26 | 349 | 4.57e-60 | 198 |
| Msa0701960 | AT2G42990.1 | 34.211 | 342 | 208 | 9 | 12 | 345 | 11 | 343 | 9.15e-59 | 194 |
| Msa0701960 | AT5G42170.1 | 33.856 | 319 | 199 | 6 | 29 | 342 | 48 | 359 | 7.14e-58 | 192 |
| Msa0701960 | AT3G16370.1 | 37.267 | 322 | 184 | 10 | 29 | 340 | 28 | 341 | 2.01e-56 | 188 |
| Msa0701960 | AT2G31540.1 | 35.647 | 317 | 193 | 8 | 25 | 334 | 29 | 341 | 3.56e-56 | 187 |
| Msa0701960 | AT1G06990.1 | 35.535 | 318 | 193 | 7 | 30 | 340 | 36 | 348 | 8.62e-56 | 186 |
| Msa0701960 | AT1G75880.1 | 34.451 | 328 | 206 | 6 | 20 | 341 | 41 | 365 | 8.70e-56 | 187 |
| Msa0701960 | AT1G75880.2 | 34.756 | 328 | 204 | 7 | 20 | 341 | 41 | 364 | 9.53e-56 | 187 |
| Msa0701960 | AT4G16230.1 | 43.049 | 223 | 123 | 3 | 25 | 244 | 24 | 245 | 1.16e-55 | 183 |
| Msa0701960 | AT4G26790.1 | 34.169 | 319 | 199 | 7 | 28 | 340 | 26 | 339 | 2.28e-55 | 185 |
| Msa0701960 | AT4G26790.2 | 34.169 | 319 | 199 | 7 | 28 | 340 | 26 | 339 | 2.28e-55 | 185 |
| Msa0701960 | AT2G30310.1 | 33.807 | 352 | 207 | 10 | 9 | 341 | 8 | 352 | 1.13e-54 | 184 |
| Msa0701960 | AT2G30220.1 | 33.708 | 356 | 201 | 11 | 9 | 341 | 8 | 351 | 4.01e-54 | 182 |
| Msa0701960 | AT1G58430.1 | 33.951 | 324 | 198 | 9 | 27 | 338 | 31 | 350 | 5.17e-54 | 182 |
| Msa0701960 | AT1G75890.2 | 34.783 | 322 | 198 | 8 | 30 | 344 | 46 | 362 | 1.87e-53 | 181 |
| Msa0701960 | AT2G24560.1 | 33.962 | 318 | 197 | 9 | 25 | 334 | 28 | 340 | 1.99e-53 | 181 |
| Msa0701960 | AT1G75890.3 | 34.783 | 322 | 198 | 8 | 30 | 344 | 75 | 391 | 2.53e-53 | 181 |
| Msa0701960 | AT2G03980.2 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0701960 | AT2G03980.3 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0701960 | AT2G03980.1 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0701960 | AT2G03980.4 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0701960 | AT1G75900.1 | 33.022 | 321 | 203 | 7 | 20 | 333 | 30 | 345 | 9.31e-53 | 179 |
| Msa0701960 | AT3G14820.1 | 33.437 | 323 | 194 | 10 | 29 | 342 | 30 | 340 | 1.06e-52 | 178 |
| Msa0701960 | AT5G33370.2 | 38.258 | 264 | 156 | 5 | 31 | 290 | 30 | 290 | 1.71e-52 | 177 |
| Msa0701960 | AT5G63170.1 | 33.762 | 311 | 185 | 8 | 28 | 333 | 25 | 319 | 3.91e-52 | 176 |
| Msa0701960 | AT1G20120.1 | 32.308 | 325 | 197 | 8 | 30 | 342 | 77 | 390 | 1.77e-51 | 176 |
| Msa0701960 | AT1G20132.1 | 33.228 | 316 | 196 | 7 | 26 | 333 | 56 | 364 | 1.85e-51 | 176 |
| Msa0701960 | AT1G75890.1 | 33.234 | 334 | 200 | 8 | 30 | 344 | 46 | 375 | 1.25e-50 | 174 |
| Msa0701960 | AT1G73610.1 | 33.233 | 331 | 183 | 10 | 29 | 350 | 33 | 334 | 1.95e-50 | 172 |
| Msa0701960 | AT1G59406.1 | 32.081 | 346 | 210 | 11 | 7 | 340 | 5 | 337 | 7.47e-49 | 168 |
| Msa0701960 | AT1G59030.1 | 32.081 | 346 | 210 | 11 | 7 | 340 | 5 | 337 | 7.47e-49 | 168 |
| Msa0701960 | AT1G58725.1 | 32.081 | 346 | 210 | 11 | 7 | 340 | 5 | 337 | 7.47e-49 | 168 |
| Msa0701960 | AT1G20135.1 | 32.013 | 303 | 187 | 7 | 35 | 333 | 33 | 320 | 1.31e-48 | 167 |
| Msa0701960 | AT1G23500.1 | 33.229 | 319 | 192 | 7 | 29 | 342 | 33 | 335 | 1.39e-48 | 167 |
| Msa0701960 | AT5G45950.1 | 29.942 | 344 | 228 | 9 | 11 | 350 | 20 | 354 | 8.32e-48 | 166 |
| Msa0701960 | AT2G40250.1 | 29.429 | 333 | 220 | 6 | 27 | 349 | 32 | 359 | 1.46e-46 | 162 |
| Msa0701960 | AT1G20130.2 | 31.940 | 335 | 194 | 9 | 29 | 346 | 182 | 499 | 1.65e-45 | 163 |
| Msa0701960 | AT1G20130.1 | 31.940 | 335 | 194 | 9 | 29 | 346 | 202 | 519 | 3.15e-45 | 162 |
| Msa0701960 | AT1G58520.3 | 30.675 | 326 | 199 | 10 | 24 | 340 | 23 | 330 | 2.80e-43 | 153 |
| Msa0701960 | AT1G58525.1 | 30.675 | 326 | 199 | 10 | 24 | 340 | 23 | 330 | 2.80e-43 | 153 |
| Msa0701960 | AT5G45960.1 | 28.889 | 315 | 209 | 8 | 29 | 333 | 45 | 354 | 2.11e-42 | 152 |
| Msa0701960 | AT1G75930.1 | 30.233 | 344 | 213 | 10 | 6 | 341 | 8 | 332 | 1.57e-41 | 149 |
| Msa0701960 | AT3G43570.1 | 29.240 | 342 | 197 | 9 | 6 | 340 | 5 | 308 | 2.59e-41 | 147 |
| Msa0701960 | AT1G75920.2 | 29.107 | 347 | 219 | 9 | 9 | 342 | 1 | 333 | 4.57e-41 | 147 |
| Msa0701960 | AT1G53920.1 | 28.775 | 351 | 230 | 9 | 25 | 363 | 42 | 384 | 5.60e-39 | 143 |
| Msa0701960 | AT3G14225.2 | 30.409 | 342 | 220 | 9 | 33 | 363 | 39 | 373 | 1.28e-38 | 142 |
| Msa0701960 | AT3G14225.1 | 30.233 | 344 | 222 | 9 | 33 | 363 | 39 | 377 | 4.38e-38 | 140 |
| Msa0701960 | AT2G04020.1 | 39.437 | 213 | 114 | 6 | 30 | 236 | 42 | 245 | 6.44e-38 | 137 |
| Msa0701960 | AT1G71120.1 | 29.619 | 341 | 219 | 10 | 29 | 361 | 29 | 356 | 1.45e-37 | 139 |
| Msa0701960 | AT1G75920.1 | 28.358 | 335 | 204 | 9 | 30 | 342 | 23 | 343 | 4.64e-37 | 137 |
| Msa0701960 | AT2G24560.2 | 32.130 | 277 | 177 | 8 | 25 | 294 | 28 | 300 | 8.33e-37 | 135 |
| Msa0701960 | AT1G75910.1 | 28.613 | 346 | 222 | 9 | 9 | 342 | 1 | 333 | 2.15e-36 | 135 |
| Msa0701960 | AT2G04020.2 | 39.614 | 207 | 110 | 6 | 30 | 230 | 42 | 239 | 4.24e-36 | 134 |
| Msa0701960 | AT5G40990.1 | 29.846 | 325 | 211 | 9 | 33 | 346 | 39 | 357 | 4.62e-35 | 132 |
| Msa0701960 | AT1G53940.2 | 30.909 | 330 | 201 | 11 | 33 | 346 | 41 | 359 | 1.66e-34 | 130 |
| Msa0701960 | AT3G43550.1 | 30.169 | 295 | 183 | 9 | 6 | 290 | 5 | 286 | 1.71e-33 | 126 |
| Msa0701960 | AT1G53990.1 | 27.778 | 342 | 222 | 9 | 33 | 363 | 37 | 364 | 1.51e-31 | 122 |
| Msa0701960 | AT1G75920.3 | 26.377 | 345 | 200 | 9 | 9 | 342 | 1 | 302 | 2.66e-31 | 120 |
| Msa0701960 | AT1G75920.4 | 27.797 | 295 | 192 | 8 | 55 | 342 | 25 | 305 | 2.95e-31 | 120 |
| Msa0701960 | AT3G05180.1 | 28.895 | 353 | 218 | 11 | 30 | 357 | 35 | 379 | 1.61e-30 | 120 |
| Msa0701960 | AT1G54020.2 | 25.485 | 361 | 241 | 9 | 6 | 360 | 8 | 346 | 3.58e-29 | 116 |
| Msa0701960 | AT2G31550.1 | 30.332 | 211 | 140 | 5 | 135 | 342 | 2 | 208 | 3.82e-29 | 112 |
| Msa0701960 | AT3G48460.1 | 28.399 | 331 | 201 | 14 | 33 | 340 | 40 | 357 | 1.19e-28 | 115 |
| Msa0701960 | AT4G16233.1 | 41.860 | 129 | 73 | 2 | 236 | 363 | 3 | 130 | 3.47e-28 | 107 |
| Msa0701960 | AT1G54030.1 | 27.761 | 335 | 213 | 11 | 33 | 363 | 54 | 363 | 9.60e-28 | 113 |
| Msa0701960 | AT1G56670.1 | 25.275 | 364 | 243 | 9 | 7 | 354 | 16 | 366 | 3.12e-27 | 110 |
| Msa0701960 | AT3G27950.1 | 26.796 | 362 | 220 | 11 | 10 | 342 | 8 | 353 | 3.92e-27 | 110 |
| Msa0701960 | AT1G54790.3 | 25.538 | 372 | 232 | 11 | 7 | 347 | 8 | 365 | 1.40e-26 | 109 |
| Msa0701960 | AT1G31550.2 | 27.042 | 355 | 218 | 13 | 35 | 363 | 40 | 379 | 3.07e-26 | 108 |
| Msa0701960 | AT1G67830.1 | 27.746 | 346 | 201 | 12 | 28 | 339 | 27 | 357 | 8.31e-26 | 107 |
| Msa0701960 | AT1G54000.1 | 25.737 | 373 | 232 | 12 | 8 | 360 | 7 | 354 | 2.67e-25 | 105 |
| Msa0701960 | AT1G28650.1 | 28.012 | 332 | 203 | 13 | 35 | 341 | 41 | 361 | 4.68e-25 | 105 |
| Msa0701960 | AT1G28570.1 | 25.064 | 391 | 242 | 17 | 3 | 361 | 5 | 376 | 7.95e-25 | 104 |
| Msa0701960 | AT4G01130.1 | 25.490 | 357 | 226 | 12 | 10 | 336 | 11 | 357 | 8.64e-25 | 104 |
| Msa0701960 | AT1G28600.1 | 26.243 | 362 | 236 | 14 | 1 | 340 | 1 | 353 | 9.83e-25 | 104 |
| Msa0701960 | AT1G54010.1 | 24.725 | 364 | 245 | 9 | 6 | 360 | 11 | 354 | 1.38e-24 | 103 |
| Msa0701960 | AT1G54790.1 | 25.401 | 374 | 234 | 11 | 7 | 347 | 3 | 364 | 2.71e-24 | 102 |
| Msa0701960 | AT1G09390.1 | 26.176 | 340 | 224 | 9 | 30 | 354 | 36 | 363 | 3.08e-24 | 102 |
| Msa0701960 | AT1G53940.1 | 30.597 | 268 | 165 | 10 | 33 | 290 | 41 | 297 | 5.43e-24 | 100 |
| Msa0701960 | AT3G14220.1 | 27.824 | 363 | 228 | 14 | 13 | 360 | 7 | 350 | 7.49e-24 | 101 |
| Msa0701960 | AT5G14450.1 | 26.273 | 373 | 236 | 12 | 12 | 355 | 20 | 382 | 1.17e-23 | 101 |
| Msa0701960 | AT4G16220.1 | 49.533 | 107 | 50 | 2 | 9 | 113 | 10 | 114 | 2.96e-23 | 97.4 |
| Msa0701960 | AT1G31550.1 | 25.989 | 354 | 220 | 13 | 35 | 363 | 40 | 376 | 6.31e-23 | 99.4 |
| Msa0701960 | AT1G28580.1 | 25.150 | 334 | 210 | 12 | 35 | 341 | 41 | 361 | 7.16e-23 | 99.0 |
| Msa0701960 | AT1G28660.1 | 27.596 | 337 | 198 | 14 | 35 | 341 | 39 | 359 | 3.83e-22 | 97.1 |
| Msa0701960 | AT1G28640.1 | 26.727 | 333 | 206 | 13 | 35 | 341 | 39 | 359 | 3.87e-22 | 97.1 |
| Msa0701960 | AT3G14210.1 | 27.246 | 345 | 208 | 14 | 33 | 360 | 38 | 356 | 3.99e-22 | 97.1 |
| Msa0701960 | AT5G03610.1 | 26.168 | 321 | 194 | 13 | 33 | 335 | 45 | 340 | 5.99e-22 | 95.9 |
| Msa0701960 | AT5G45910.1 | 28.877 | 374 | 208 | 19 | 7 | 340 | 3 | 358 | 1.01e-21 | 95.5 |
| Msa0701960 | AT1G28590.1 | 25.745 | 369 | 237 | 15 | 1 | 341 | 1 | 360 | 1.75e-21 | 95.1 |
| Msa0701960 | AT3G62280.1 | 26.462 | 325 | 216 | 10 | 28 | 340 | 33 | 346 | 1.83e-21 | 94.7 |
| Msa0701960 | AT3G26430.1 | 27.224 | 371 | 216 | 15 | 12 | 342 | 5 | 361 | 3.10e-21 | 94.4 |
| Msa0701960 | AT1G28670.1 | 26.935 | 323 | 205 | 13 | 35 | 334 | 39 | 353 | 4.55e-21 | 94.0 |
| Msa0701960 | AT1G28660.2 | 27.596 | 337 | 197 | 15 | 35 | 341 | 39 | 358 | 6.89e-21 | 93.2 |
| Msa0701960 | AT1G28610.2 | 25.549 | 364 | 236 | 14 | 1 | 340 | 1 | 353 | 7.23e-21 | 93.2 |
| Msa0701960 | AT2G27360.1 | 25.758 | 330 | 214 | 14 | 35 | 341 | 37 | 358 | 8.78e-21 | 93.2 |
| Msa0701960 | AT1G54790.2 | 24.250 | 400 | 232 | 13 | 7 | 347 | 3 | 390 | 1.95e-19 | 89.4 |
| Msa0701960 | AT3G09930.2 | 25.705 | 319 | 199 | 13 | 33 | 335 | 41 | 337 | 4.78e-19 | 87.8 |
| Msa0701960 | AT3G09930.1 | 25.705 | 319 | 199 | 13 | 33 | 335 | 41 | 337 | 4.78e-19 | 87.8 |
| Msa0701960 | AT4G01130.2 | 25.168 | 298 | 196 | 10 | 10 | 290 | 11 | 298 | 1.64e-18 | 85.9 |
| Msa0701960 | AT1G54020.1 | 23.759 | 282 | 188 | 8 | 84 | 360 | 1 | 260 | 6.06e-17 | 80.5 |
| Msa0701960 | AT1G54020.5 | 23.759 | 282 | 188 | 8 | 84 | 360 | 1 | 260 | 6.06e-17 | 80.5 |
| Msa0701960 | AT1G54020.3 | 23.759 | 282 | 188 | 8 | 84 | 360 | 1 | 260 | 6.06e-17 | 80.5 |
| Msa0701960 | AT1G56670.2 | 24.407 | 295 | 199 | 7 | 7 | 290 | 16 | 297 | 7.66e-17 | 80.5 |
| Msa0701960 | AT5G03600.1 | 24.611 | 321 | 201 | 13 | 28 | 335 | 11 | 303 | 8.52e-16 | 77.8 |
| Msa0701960 | AT5G03600.2 | 24.611 | 321 | 201 | 13 | 28 | 335 | 46 | 338 | 9.12e-16 | 78.2 |
| Msa0701960 | AT1G54030.2 | 27.426 | 237 | 146 | 8 | 33 | 265 | 54 | 268 | 1.04e-15 | 77.4 |
| Msa0701960 | AT1G54020.4 | 25.481 | 208 | 148 | 4 | 155 | 360 | 9 | 211 | 1.89e-15 | 75.5 |
| Msa0701960 | AT4G01130.3 | 24.873 | 197 | 124 | 5 | 158 | 336 | 81 | 271 | 7.70e-15 | 74.7 |
| Msa0701960 | AT1G28600.2 | 28.889 | 180 | 114 | 6 | 1 | 170 | 1 | 176 | 1.30e-12 | 67.0 |
| Msa0701960 | AT3G14210.2 | 24.651 | 215 | 148 | 6 | 154 | 360 | 20 | 228 | 2.78e-12 | 66.6 |
| Msa0701960 | AT2G36325.1 | 23.457 | 324 | 197 | 14 | 33 | 335 | 49 | 342 | 6.77e-12 | 66.6 |
Find 93 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTTGCTGTTGAATATT+TGG | 0.149733 | 4_4:-73416389 | None:intergenic |
| CTCCTTGTAGCCAATATATT+TGG | 0.164654 | 4_4:-73416324 | None:intergenic |
| TTGGAATGTGTTATTTCTTT+TGG | 0.168591 | 4_4:+73416901 | Msa0701960:three_prime_UTR |
| GTTCCTTGTTACTTCATATT+TGG | 0.188601 | 4_4:+73414378 | Msa0701960:CDS |
| CTTCATATTTGGTGATTCTT+TGG | 0.189419 | 4_4:+73414389 | Msa0701960:CDS |
| GCAAGGAAAATGGTACTATT+TGG | 0.193855 | 4_4:+73416279 | Msa0701960:CDS |
| CAACAATGGTCTTCAATCTT+TGG | 0.266111 | 4_4:+73414425 | Msa0701960:CDS |
| TTTATTGTCACATACTATAT+AGG | 0.268335 | 4_4:+73416952 | Msa0701960:three_prime_UTR |
| GTTATCTATGTAAATTCTTA+TGG | 0.274377 | 4_4:+73416456 | Msa0701960:CDS |
| CTTAGAACTCTTTATAATAA+TGG | 0.282837 | 4_4:+73416255 | Msa0701960:CDS |
| ATAAGCAACCCTTCAGCTTA+TGG | 0.283201 | 4_4:+73416495 | Msa0701960:CDS |
| ACTACCATAGTTAATGTTCT+TGG | 0.287184 | 4_4:+73416882 | Msa0701960:three_prime_UTR |
| CATAAACATGTTTGCATTGT+TGG | 0.293332 | 4_4:+73414311 | Msa0701960:CDS |
| ACAGAAGAGAGTATTTGTTT+TGG | 0.298948 | 4_4:+73416704 | Msa0701960:CDS |
| GGCTAGAAGGGTAGATAGAT+AGG | 0.300404 | 4_4:-73414245 | None:intergenic |
| AGAGCTGATTACTTTCCTTA+TGG | 0.305355 | 4_4:+73414450 | Msa0701960:CDS |
| TTATTGTCACATACTATATA+GGG | 0.306334 | 4_4:+73416953 | Msa0701960:three_prime_UTR |
| CTATTTGGGATTGGTCAAAT+AGG | 0.314934 | 4_4:+73416294 | Msa0701960:CDS |
| AGCAAGTGTATTTACTCAAT+TGG | 0.316742 | 4_4:+73416117 | Msa0701960:CDS |
| ATAATTGACTCCTTTGAGTA+TGG | 0.322702 | 4_4:-73415833 | None:intergenic |
| CAAGGAAAATGGTACTATTT+GGG | 0.330075 | 4_4:+73416280 | Msa0701960:CDS |
| TCCTTGTAGCCAATATATTT+GGG | 0.330974 | 4_4:-73416323 | None:intergenic |
| GCACTTGGGCACTAAAACTA+AGG | 0.333248 | 4_4:-73416023 | None:intergenic |
| TAATAATGGAGCAAGGAAAA+TGG | 0.350040 | 4_4:+73416269 | Msa0701960:CDS |
| TCCACACATGTTACGCCATC+CGG | 0.350778 | 4_4:-73416348 | None:intergenic |
| TTGTGCTTGGTTTGTTGAGT+GGG | 0.361594 | 4_4:+73414337 | Msa0701960:CDS |
| GGTGGTGAAGAGTGGCTAGA+AGG | 0.364704 | 4_4:-73414258 | None:intergenic |
| GGTGATTCTTTGGTGGATAA+TGG | 0.370098 | 4_4:+73414399 | Msa0701960:CDS |
| CCTTATGGAATTGACTTTGG+TGG | 0.378784 | 4_4:+73414465 | Msa0701960:CDS |
| AATTTAACAGCTGAGCTATT+GGG | 0.380127 | 4_4:+73415766 | Msa0701960:intron |
| CTTGGTTTGTTGAGTGGGGT+TGG | 0.398393 | 4_4:+73414342 | Msa0701960:CDS |
| AGGCTGCAGCCCAAATATAT+TGG | 0.400606 | 4_4:+73416314 | Msa0701960:CDS |
| TTTCCTTATGGAATTGACTT+TGG | 0.406222 | 4_4:+73414462 | Msa0701960:CDS |
| AGAGGAAACTGGACGGCAAC+TGG | 0.408357 | 4_4:+73415879 | Msa0701960:CDS |
| AAATTTAACAGCTGAGCTAT+TGG | 0.411633 | 4_4:+73415765 | Msa0701960:intron |
| ATTGACTTTGGTGGACCTAC+TGG | 0.426568 | 4_4:+73414474 | Msa0701960:CDS |
| GTGTATTTACTCAATTGGAT+TGG | 0.426674 | 4_4:+73416122 | Msa0701960:CDS |
| GCTAAGTGGCTAATATCAAT+AGG | 0.428046 | 4_4:-73416808 | None:intergenic |
| GCATTGTTGGTTGTTGTGCT+TGG | 0.430718 | 4_4:+73414324 | Msa0701960:CDS |
| TGTATTTACTCAATTGGATT+GGG | 0.440503 | 4_4:+73416123 | Msa0701960:CDS |
| CTACTTGTGACACAGTGCTT+TGG | 0.442326 | 4_4:-73416053 | None:intergenic |
| AAGAGTGTAAATATATATAG+TGG | 0.457369 | 4_4:-73414185 | None:intergenic |
| CATTCCAAGAACATTAACTA+TGG | 0.459879 | 4_4:-73416886 | None:intergenic |
| AATTATGCTTCTGCAGCAGC+TGG | 0.464686 | 4_4:+73415850 | Msa0701960:CDS |
| CATATTTGGTGATTCTTTGG+TGG | 0.471586 | 4_4:+73414392 | Msa0701960:CDS |
| GTGGTGAAGAGTGGCTAGAA+GGG | 0.475155 | 4_4:-73414257 | None:intergenic |
| AAAACCACTGTTGATGCAAT+TGG | 0.478051 | 4_4:+73414513 | Msa0701960:CDS |
| AGATCATCAGCATACTCATC+TGG | 0.478200 | 4_4:-73416210 | None:intergenic |
| AATGCTATTAAAATTAAGTA+AGG | 0.482276 | 4_4:-73417024 | None:intergenic |
| GCTGGAATTAGAGAGGAAAC+TGG | 0.486290 | 4_4:+73415868 | Msa0701960:CDS |
| GCTAGAAGGGTAGATAGATA+GGG | 0.489285 | 4_4:-73414244 | None:intergenic |
| AAAATGGTACTATTTGGGAT+TGG | 0.509987 | 4_4:+73416285 | Msa0701960:CDS |
| CCACCAAAGTCAATTCCATA+AGG | 0.510808 | 4_4:-73414465 | None:intergenic |
| TCAATAGGATAAGCATCCTC+TGG | 0.512358 | 4_4:-73416793 | None:intergenic |
| ATGCCTCAATTCTATAGCAC+AGG | 0.522685 | 4_4:+73416174 | Msa0701960:CDS |
| ATTAAATTACCATAAGCTGA+AGG | 0.527446 | 4_4:-73416504 | None:intergenic |
| ATGAAGTAACAAGGAACTTG+TGG | 0.528070 | 4_4:-73414372 | None:intergenic |
| GTTGTGCTTGGTTTGTTGAG+TGG | 0.531237 | 4_4:+73414336 | Msa0701960:CDS |
| GCCCAAATATATTGGCTACA+AGG | 0.535288 | 4_4:+73416322 | Msa0701960:CDS |
| TTCTCACATGGTGTTTGCAA+TGG | 0.539683 | 4_4:-73416682 | None:intergenic |
| TCACAAGTAGTGAATATACT+AGG | 0.545333 | 4_4:+73416066 | Msa0701960:CDS |
| TTAAATTACCATAAGCTGAA+GGG | 0.562936 | 4_4:-73416503 | None:intergenic |
| TGTGCTTGGTTTGTTGAGTG+GGG | 0.564540 | 4_4:+73414338 | Msa0701960:CDS |
| CCACACATGTTACGCCATCC+GGG | 0.567099 | 4_4:-73416347 | None:intergenic |
| ATCATCACTAGCAGATGCAT+AGG | 0.567991 | 4_4:-73415809 | None:intergenic |
| TATATTGGCTACAAGGAGCC+CGG | 0.568733 | 4_4:+73416329 | Msa0701960:CDS |
| CCCGGATGGCGTAACATGTG+TGG | 0.590019 | 4_4:+73416347 | Msa0701960:CDS |
| AGTGATGATGCCATACTCAA+AGG | 0.595556 | 4_4:+73415823 | Msa0701960:CDS |
| AATGCTGGATGCTGTGGAGT+AGG | 0.598356 | 4_4:+73416631 | Msa0701960:CDS |
| GTTACAAATGCTGGATGCTG+TGG | 0.599550 | 4_4:+73416625 | Msa0701960:CDS |
| TAGATCAGAGCTGAGCTAAG+TGG | 0.600707 | 4_4:-73416822 | None:intergenic |
| CCATTGGAAAACCTTCCAGT+AGG | 0.600738 | 4_4:-73414489 | None:intergenic |
| TATCAGCATGGTCTTGCTAG+TGG | 0.602418 | 4_4:+73416843 | Msa0701960:three_prime_UTR |
| GTGGATAATGGTAACAACAA+TGG | 0.606722 | 4_4:+73414411 | Msa0701960:CDS |
| ACTTTGGTGGACCTACTGGA+AGG | 0.612651 | 4_4:+73414478 | Msa0701960:CDS |
| TACTCTCTTCTGTTCTCACA+TGG | 0.612707 | 4_4:-73416694 | None:intergenic |
| TCATCACTAGCAGATGCATA+GGG | 0.614085 | 4_4:-73415808 | None:intergenic |
| CTCTTTATAATAATGGAGCA+AGG | 0.616381 | 4_4:+73416262 | Msa0701960:CDS |
| ACTACATTTCCAGCTTCAGT+CGG | 0.632841 | 4_4:-73416739 | None:intergenic |
| TGCAGCAGCTGGAATTAGAG+AGG | 0.635095 | 4_4:+73415861 | Msa0701960:CDS |
| CTGGATGCTGTGGAGTAGGA+AGG | 0.636608 | 4_4:+73416635 | Msa0701960:CDS |
| TTGGCTACAAGGAGCCCGGA+TGG | 0.639850 | 4_4:+73416333 | Msa0701960:CDS |
| CTTACCAATTGCATCAACAG+TGG | 0.640720 | 4_4:-73414517 | None:intergenic |
| ATATTCAACAGCAAATTGAA+AGG | 0.643543 | 4_4:+73416393 | Msa0701960:CDS |
| GTGCCTGTGCTATAGAATTG+AGG | 0.644555 | 4_4:-73416177 | None:intergenic |
| TCACTAGCAGATGCATAGGG+TGG | 0.661781 | 4_4:-73415805 | None:intergenic |
| TTACAGTGCTCAATCTCCAG+AGG | 0.662313 | 4_4:+73416777 | Msa0701960:CDS |
| AGTGAATATACTAGGAACTG+AGG | 0.666217 | 4_4:+73416074 | Msa0701960:CDS |
| TCACCAAATATGAAGTAACA+AGG | 0.672914 | 4_4:-73414381 | None:intergenic |
| AAGTAAGGACTAAACTCACA+AGG | 0.682657 | 4_4:-73417009 | None:intergenic |
| TCAGCTCTGATCTATCAGCA+TGG | 0.682994 | 4_4:+73416831 | Msa0701960:exon |
| GAATTAGAGAGGAAACTGGA+CGG | 0.701371 | 4_4:+73415872 | Msa0701960:CDS |
| TGTGGAGTAGGAAGGAACAA+TGG | 0.715337 | 4_4:+73416643 | Msa0701960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTAATTTTCTATGAT+TGG | - | chr4_4:73415207-73415226 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTATAAAAAATTG+GGG | - | chr4_4:73415315-73415334 | None:intergenic | 10.0% |
| !!! | TAATATTGATTTTTTTTTTG+AGG | + | chr4_4:73415660-73415679 | Msa0701960:intron | 10.0% |
| !! | ATTTAATTGTTTAAGTATAT+TGG | + | chr4_4:73415966-73415985 | Msa0701960:intron | 10.0% |
| !!! | TTAAATTTGTTATATTTCAC+TGG | + | chr4_4:73414750-73414769 | Msa0701960:intron | 15.0% |
| !!! | ATGAAATTCAAATCTTTTTT+AGG | + | chr4_4:73414956-73414975 | Msa0701960:intron | 15.0% |
| !! | ATATTATGATTTCACTAAAA+AGG | - | chr4_4:73415358-73415377 | None:intergenic | 15.0% |
| !! | AATTAAATTTGATGTCAATA+AGG | - | chr4_4:73416592-73416611 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr4_4:73417027-73417046 | None:intergenic | 15.0% |
| !!! | AAGAGTGTAAATATATATAG+TGG | - | chr4_4:73414188-73414207 | None:intergenic | 20.0% |
| !! | GAAAATAAAAGAAAAGCAAA+GGG | - | chr4_4:73414544-73414563 | None:intergenic | 20.0% |
| !! | AGAAAATAAAAGAAAAGCAA+AGG | - | chr4_4:73414545-73414564 | None:intergenic | 20.0% |
| !!! | AATTCAAATCTTTTTTAGGA+TGG | + | chr4_4:73414960-73414979 | Msa0701960:intron | 20.0% |
| !! | AATGGTCAAAATTATAGAAA+TGG | - | chr4_4:73415118-73415137 | None:intergenic | 20.0% |
| !! | TTATAAAAAATTGGGGAATT+GGG | - | chr4_4:73415308-73415327 | None:intergenic | 20.0% |
| !! | TTTATAAAAAATTGGGGAAT+TGG | - | chr4_4:73415309-73415328 | None:intergenic | 20.0% |
| !! | AATTATGCTGTAATATTTGT+AGG | + | chr4_4:73415993-73416012 | Msa0701960:intron | 20.0% |
| !! | ATTATGCTGTAATATTTGTA+GGG | + | chr4_4:73415994-73416013 | Msa0701960:intron | 20.0% |
| !! | CTTAGAACTCTTTATAATAA+TGG | + | chr4_4:73416255-73416274 | Msa0701960:CDS | 20.0% |
| !! | GTTATCTATGTAAATTCTTA+TGG | + | chr4_4:73416456-73416475 | Msa0701960:CDS | 20.0% |
| !!! | TGACATCAAATTTAATTTTC+AGG | + | chr4_4:73416595-73416614 | Msa0701960:intron | 20.0% |
| !! | TTTATTGTCACATACTATAT+AGG | + | chr4_4:73416952-73416971 | Msa0701960:three_prime_UTR | 20.0% |
| !! | TTATTGTCACATACTATATA+GGG | + | chr4_4:73416953-73416972 | Msa0701960:three_prime_UTR | 20.0% |
| !! | TTATCTAACCGTCTAAAATT+TGG | + | chr4_4:73414664-73414683 | Msa0701960:intron | 25.0% |
| !! | TATCTAACCGTCTAAAATTT+GGG | + | chr4_4:73414665-73414684 | Msa0701960:intron | 25.0% |
| !! | AACAAAACCCAAATTTTAGA+CGG | - | chr4_4:73414675-73414694 | None:intergenic | 25.0% |
| !!! | GGTTTTGTTGATAATTAAGT+TGG | + | chr4_4:73414686-73414705 | Msa0701960:intron | 25.0% |
| !! | TAAGTTGGCATAAATTATAC+TGG | + | chr4_4:73414701-73414720 | Msa0701960:intron | 25.0% |
| ! | TTCTAGGTAGTTAAAATAAC+TGG | - | chr4_4:73414880-73414899 | None:intergenic | 25.0% |
| ! | CCTATTACTATCAATTAAAG+TGG | - | chr4_4:73415015-73415034 | None:intergenic | 25.0% |
| !! | CCACTTTAATTGATAGTAAT+AGG | + | chr4_4:73415012-73415031 | Msa0701960:intron | 25.0% |
| ! | TTGAAGATTTGGCTAAAATA+GGG | - | chr4_4:73415057-73415076 | None:intergenic | 25.0% |
| ! | ATTGAAGATTTGGCTAAAAT+AGG | - | chr4_4:73415058-73415077 | None:intergenic | 25.0% |
| !! | TTTAGCCAAATCTTCAATTT+TGG | + | chr4_4:73415060-73415079 | Msa0701960:intron | 25.0% |
| ! | AAAGATCCATAGTCAAAATA+GGG | + | chr4_4:73415252-73415271 | Msa0701960:intron | 25.0% |
| !!! | TATAAGGCTTACTAGTTTTT+TGG | - | chr4_4:73415279-73415298 | None:intergenic | 25.0% |
| ! | AAACAAACACAAGATTTAAG+TGG | + | chr4_4:73415621-73415640 | Msa0701960:intron | 25.0% |
| ! | AACAAACACAAGATTTAAGT+GGG | + | chr4_4:73415622-73415641 | Msa0701960:intron | 25.0% |
| ! | TGTATTTACTCAATTGGATT+GGG | + | chr4_4:73416123-73416142 | Msa0701960:CDS | 25.0% |
| !!! | TCAATTTGCTGTTGAATATT+TGG | - | chr4_4:73416392-73416411 | None:intergenic | 25.0% |
| ! | ATATTCAACAGCAAATTGAA+AGG | + | chr4_4:73416393-73416412 | Msa0701960:CDS | 25.0% |
| !! | ACATAGATAACTTTTGAATC+AGG | - | chr4_4:73416447-73416466 | None:intergenic | 25.0% |
| ! | TTAAATTACCATAAGCTGAA+GGG | - | chr4_4:73416506-73416525 | None:intergenic | 25.0% |
| ! | ATTAAATTACCATAAGCTGA+AGG | - | chr4_4:73416507-73416526 | None:intergenic | 25.0% |
| ! | ATGTGACTAGAAAAATGTTA+AGG | - | chr4_4:73416536-73416555 | None:intergenic | 25.0% |
| !!! | TTGGAATGTGTTATTTCTTT+TGG | + | chr4_4:73416901-73416920 | Msa0701960:three_prime_UTR | 25.0% |
| AATGCCATTGAAGCAAAAAT+TGG | - | chr4_4:73414282-73414301 | None:intergenic | 30.0% | |
| CATAAACATGTTTGCATTGT+TGG | + | chr4_4:73414311-73414330 | Msa0701960:CDS | 30.0% | |
| ! | GTTCCTTGTTACTTCATATT+TGG | + | chr4_4:73414378-73414397 | Msa0701960:CDS | 30.0% |
| TCACCAAATATGAAGTAACA+AGG | - | chr4_4:73414384-73414403 | None:intergenic | 30.0% | |
| ! | CTTCATATTTGGTGATTCTT+TGG | + | chr4_4:73414389-73414408 | Msa0701960:CDS | 30.0% |
| ! | TTTCCTTATGGAATTGACTT+TGG | + | chr4_4:73414462-73414481 | Msa0701960:CDS | 30.0% |
| GCATGCACTTGTATATTATA+TGG | + | chr4_4:73414579-73414598 | Msa0701960:intron | 30.0% | |
| CATAAATTATACTGGTAGAG+TGG | + | chr4_4:73414709-73414728 | Msa0701960:intron | 30.0% | |
| AGGTAGTTAAAATAACTGGA+GGG | - | chr4_4:73414876-73414895 | None:intergenic | 30.0% | |
| TAGGTAGTTAAAATAACTGG+AGG | - | chr4_4:73414877-73414896 | None:intergenic | 30.0% | |
| ATTTCATGGATCATGTTTCT+AGG | - | chr4_4:73414896-73414915 | None:intergenic | 30.0% | |
| AAGCGTTTGAATTTGTAACA+GGG | + | chr4_4:73414933-73414952 | Msa0701960:intron | 30.0% | |
| !!! | TCAAATCTTTTTTAGGATGG+TGG | + | chr4_4:73414963-73414982 | Msa0701960:intron | 30.0% |
| AGTGACCAAAATTGAAGATT+TGG | - | chr4_4:73415068-73415087 | None:intergenic | 30.0% | |
| !! | TTGGTCACTCTATTTCTAAT+TGG | + | chr4_4:73415079-73415098 | Msa0701960:intron | 30.0% |
| AGATCAAAATGATGTCTTAC+TGG | + | chr4_4:73415162-73415181 | Msa0701960:intron | 30.0% | |
| GAAAGATCCATAGTCAAAAT+AGG | + | chr4_4:73415251-73415270 | Msa0701960:intron | 30.0% | |
| GGGAATTGGGAAATATTATA+AGG | - | chr4_4:73415295-73415314 | None:intergenic | 30.0% | |
| ! | GTGCTTTACATTTTTGACAA+AGG | + | chr4_4:73415526-73415545 | Msa0701960:intron | 30.0% |
| ! | ATCAGTACTTCTGGTAATTT+TGG | - | chr4_4:73415592-73415611 | None:intergenic | 30.0% |
| !! | AATTACCAGAAGTACTGATT+CGG | + | chr4_4:73415593-73415612 | Msa0701960:intron | 30.0% |
| AGATGTGAAACAATCAATAC+TGG | - | chr4_4:73415698-73415717 | None:intergenic | 30.0% | |
| AAATTTAACAGCTGAGCTAT+TGG | + | chr4_4:73415765-73415784 | Msa0701960:intron | 30.0% | |
| AATTTAACAGCTGAGCTATT+GGG | + | chr4_4:73415766-73415785 | Msa0701960:intron | 30.0% | |
| ! | ATAATTGACTCCTTTGAGTA+TGG | - | chr4_4:73415836-73415855 | None:intergenic | 30.0% |
| TCACAAGTAGTGAATATACT+AGG | + | chr4_4:73416066-73416085 | Msa0701960:CDS | 30.0% | |
| AGCAAGTGTATTTACTCAAT+TGG | + | chr4_4:73416117-73416136 | Msa0701960:CDS | 30.0% | |
| GTGTATTTACTCAATTGGAT+TGG | + | chr4_4:73416122-73416141 | Msa0701960:CDS | 30.0% | |
| ! | CTCTTTATAATAATGGAGCA+AGG | + | chr4_4:73416262-73416281 | Msa0701960:CDS | 30.0% |
| ! | TAATAATGGAGCAAGGAAAA+TGG | + | chr4_4:73416269-73416288 | Msa0701960:CDS | 30.0% |
| CAAGGAAAATGGTACTATTT+GGG | + | chr4_4:73416280-73416299 | Msa0701960:CDS | 30.0% | |
| ! | AAAATGGTACTATTTGGGAT+TGG | + | chr4_4:73416285-73416304 | Msa0701960:CDS | 30.0% |
| TCCTTGTAGCCAATATATTT+GGG | - | chr4_4:73416326-73416345 | None:intergenic | 30.0% | |
| !!! | ACAGAAGAGAGTATTTGTTT+TGG | + | chr4_4:73416704-73416723 | Msa0701960:CDS | 30.0% |
| !!! | CAGAAGAGAGTATTTGTTTT+GGG | + | chr4_4:73416705-73416724 | Msa0701960:CDS | 30.0% |
| ACTACCATAGTTAATGTTCT+TGG | + | chr4_4:73416882-73416901 | Msa0701960:three_prime_UTR | 30.0% | |
| CATTCCAAGAACATTAACTA+TGG | - | chr4_4:73416889-73416908 | None:intergenic | 30.0% | |
| ! | ACCACCAATTTTTGCTTCAA+TGG | + | chr4_4:73414275-73414294 | Msa0701960:exon | 35.0% |
| ! | TTTTGCTTCAATGGCATTTG+AGG | + | chr4_4:73414284-73414303 | Msa0701960:exon | 35.0% |
| ATGAAGTAACAAGGAACTTG+TGG | - | chr4_4:73414375-73414394 | None:intergenic | 35.0% | |
| ! | CATATTTGGTGATTCTTTGG+TGG | + | chr4_4:73414392-73414411 | Msa0701960:CDS | 35.0% |
| ! | GTGGATAATGGTAACAACAA+TGG | + | chr4_4:73414411-73414430 | Msa0701960:CDS | 35.0% |
| CAACAATGGTCTTCAATCTT+TGG | + | chr4_4:73414425-73414444 | Msa0701960:CDS | 35.0% | |
| AGAGCTGATTACTTTCCTTA+TGG | + | chr4_4:73414450-73414469 | Msa0701960:CDS | 35.0% | |
| ! | ATCAACAGTGGTTTTTCCAT+TGG | - | chr4_4:73414508-73414527 | None:intergenic | 35.0% |
| AAAACCACTGTTGATGCAAT+TGG | + | chr4_4:73414513-73414532 | Msa0701960:CDS | 35.0% | |
| ! | ACAAATTCAAACGCTTGCTA+TGG | - | chr4_4:73414929-73414948 | None:intergenic | 35.0% |
| CAAGCGTTTGAATTTGTAAC+AGG | + | chr4_4:73414932-73414951 | Msa0701960:intron | 35.0% | |
| TTGTCACATCATCAGTTGAA+TGG | - | chr4_4:73415136-73415155 | None:intergenic | 35.0% | |
| !!! | TTTGGTCCCTATTTTGACTA+TGG | - | chr4_4:73415261-73415280 | None:intergenic | 35.0% |
| AACAAAAACACCTAGAAGCA+TGG | + | chr4_4:73415331-73415350 | Msa0701960:intron | 35.0% | |
| ! | ATGGAATGGAATTTAAAGCC+CGG | - | chr4_4:73415455-73415474 | None:intergenic | 35.0% |
| ! | CTGGTAATTTTGGATCTCTT+TGG | - | chr4_4:73415582-73415601 | None:intergenic | 35.0% |
| ! | TTTTACCGAATCAGTACTTC+TGG | - | chr4_4:73415601-73415620 | None:intergenic | 35.0% |
| TACTGTTGTCTAACTAACTG+TGG | + | chr4_4:73415742-73415761 | Msa0701960:intron | 35.0% | |
| !! | GCTTTGGTAATTTTGCACTT+GGG | - | chr4_4:73416040-73416059 | None:intergenic | 35.0% |
| !! | TGCTTTGGTAATTTTGCACT+TGG | - | chr4_4:73416041-73416060 | None:intergenic | 35.0% |
| AGTGAATATACTAGGAACTG+AGG | + | chr4_4:73416074-73416093 | Msa0701960:CDS | 35.0% | |
| GCAAGGAAAATGGTACTATT+TGG | + | chr4_4:73416279-73416298 | Msa0701960:CDS | 35.0% | |
| !! | CTATTTGGGATTGGTCAAAT+AGG | + | chr4_4:73416294-73416313 | Msa0701960:CDS | 35.0% |
| CTCCTTGTAGCCAATATATT+TGG | - | chr4_4:73416327-73416346 | None:intergenic | 35.0% | |
| ! | TAACTTTTGAATCAGGAAGC+TGG | - | chr4_4:73416440-73416459 | None:intergenic | 35.0% |
| !! | GGTTTTAGTGTTACAAATGC+TGG | + | chr4_4:73416616-73416635 | Msa0701960:intron | 35.0% |
| GCTAAGTGGCTAATATCAAT+AGG | - | chr4_4:73416811-73416830 | None:intergenic | 35.0% | |
| !! | CACAAGGTCGCTATTTTATA+GGG | - | chr4_4:73416996-73417015 | None:intergenic | 35.0% |
| !! | TCACAAGGTCGCTATTTTAT+AGG | - | chr4_4:73416997-73417016 | None:intergenic | 35.0% |
| AAGTAAGGACTAAACTCACA+AGG | - | chr4_4:73417012-73417031 | None:intergenic | 35.0% | |
| GCTAGAAGGGTAGATAGATA+GGG | - | chr4_4:73414247-73414266 | None:intergenic | 40.0% | |
| !! | CAAAAATTGGTGGTGAAGAG+TGG | - | chr4_4:73414269-73414288 | None:intergenic | 40.0% |
| GCCATTGAAGCAAAAATTGG+TGG | - | chr4_4:73414279-73414298 | None:intergenic | 40.0% | |
| !! | TTGTGCTTGGTTTGTTGAGT+GGG | + | chr4_4:73414337-73414356 | Msa0701960:CDS | 40.0% |
| ! | GGTGATTCTTTGGTGGATAA+TGG | + | chr4_4:73414399-73414418 | Msa0701960:CDS | 40.0% |
| CCACCAAAGTCAATTCCATA+AGG | - | chr4_4:73414468-73414487 | None:intergenic | 40.0% | |
| ! | CCTTATGGAATTGACTTTGG+TGG | + | chr4_4:73414465-73414484 | Msa0701960:CDS | 40.0% |
| CTTACCAATTGCATCAACAG+TGG | - | chr4_4:73414520-73414539 | None:intergenic | 40.0% | |
| CTAAAAAGGACCATGCTTCT+AGG | - | chr4_4:73415344-73415363 | None:intergenic | 40.0% | |
| ! | GTAGTAGAGTACTAGCATCA+TGG | - | chr4_4:73415405-73415424 | None:intergenic | 40.0% |
| CAAGATTCACACTCATCAAG+AGG | - | chr4_4:73415429-73415448 | None:intergenic | 40.0% | |
| ATGAGTGTGAATCTTGTGAC+CGG | + | chr4_4:73415433-73415452 | Msa0701960:intron | 40.0% | |
| TCCATTCCATTCCATTCACA+TGG | + | chr4_4:73415465-73415484 | Msa0701960:intron | 40.0% | |
| ACCATGTGAATGGAATGGAA+TGG | - | chr4_4:73415469-73415488 | None:intergenic | 40.0% | |
| ACAGAACCATGTGAATGGAA+TGG | - | chr4_4:73415474-73415493 | None:intergenic | 40.0% | |
| ! | TCCATTCACATGGTTCTGTT+TGG | + | chr4_4:73415475-73415494 | Msa0701960:intron | 40.0% |
| ACCAAACAGAACCATGTGAA+TGG | - | chr4_4:73415479-73415498 | None:intergenic | 40.0% | |
| TCATCACTAGCAGATGCATA+GGG | - | chr4_4:73415811-73415830 | None:intergenic | 40.0% | |
| ATCATCACTAGCAGATGCAT+AGG | - | chr4_4:73415812-73415831 | None:intergenic | 40.0% | |
| ! | AGTGATGATGCCATACTCAA+AGG | + | chr4_4:73415823-73415842 | Msa0701960:CDS | 40.0% |
| GAATTAGAGAGGAAACTGGA+CGG | + | chr4_4:73415872-73415891 | Msa0701960:CDS | 40.0% | |
| ATGCCTCAATTCTATAGCAC+AGG | + | chr4_4:73416174-73416193 | Msa0701960:CDS | 40.0% | |
| AGATCATCAGCATACTCATC+TGG | - | chr4_4:73416213-73416232 | None:intergenic | 40.0% | |
| ! | GCCCAAATATATTGGCTACA+AGG | + | chr4_4:73416322-73416341 | Msa0701960:CDS | 40.0% |
| ATAAGCAACCCTTCAGCTTA+TGG | + | chr4_4:73416495-73416514 | Msa0701960:CDS | 40.0% | |
| TTCTCACATGGTGTTTGCAA+TGG | - | chr4_4:73416685-73416704 | None:intergenic | 40.0% | |
| TACTCTCTTCTGTTCTCACA+TGG | - | chr4_4:73416697-73416716 | None:intergenic | 40.0% | |
| ACTACATTTCCAGCTTCAGT+CGG | - | chr4_4:73416742-73416761 | None:intergenic | 40.0% | |
| TCAATAGGATAAGCATCCTC+TGG | - | chr4_4:73416796-73416815 | None:intergenic | 40.0% | |
| GGCTAGAAGGGTAGATAGAT+AGG | - | chr4_4:73414248-73414267 | None:intergenic | 45.0% | |
| ! | GCATTGTTGGTTGTTGTGCT+TGG | + | chr4_4:73414324-73414343 | Msa0701960:CDS | 45.0% |
| !! | GTTGTGCTTGGTTTGTTGAG+TGG | + | chr4_4:73414336-73414355 | Msa0701960:CDS | 45.0% |
| !! | TGTGCTTGGTTTGTTGAGTG+GGG | + | chr4_4:73414338-73414357 | Msa0701960:CDS | 45.0% |
| ! | ATTGACTTTGGTGGACCTAC+TGG | + | chr4_4:73414474-73414493 | Msa0701960:CDS | 45.0% |
| CCATTGGAAAACCTTCCAGT+AGG | - | chr4_4:73414492-73414511 | None:intergenic | 45.0% | |
| ! | CCTACTGGAAGGTTTTCCAA+TGG | + | chr4_4:73414489-73414508 | Msa0701960:CDS | 45.0% |
| ATGGAGCTGCTGACATTTCA+TGG | - | chr4_4:73414910-73414929 | None:intergenic | 45.0% | |
| TGAGTGTGAATCTTGTGACC+GGG | + | chr4_4:73415434-73415453 | Msa0701960:intron | 45.0% | |
| AATTATGCTTCTGCAGCAGC+TGG | + | chr4_4:73415850-73415869 | Msa0701960:CDS | 45.0% | |
| GCTGGAATTAGAGAGGAAAC+TGG | + | chr4_4:73415868-73415887 | Msa0701960:CDS | 45.0% | |
| GCACTTGGGCACTAAAACTA+AGG | - | chr4_4:73416026-73416045 | None:intergenic | 45.0% | |
| CTACTTGTGACACAGTGCTT+TGG | - | chr4_4:73416056-73416075 | None:intergenic | 45.0% | |
| GTGCCTGTGCTATAGAATTG+AGG | - | chr4_4:73416180-73416199 | None:intergenic | 45.0% | |
| AGGCTGCAGCCCAAATATAT+TGG | + | chr4_4:73416314-73416333 | Msa0701960:CDS | 45.0% | |
| ! | TATATTGGCTACAAGGAGCC+CGG | + | chr4_4:73416329-73416348 | Msa0701960:CDS | 45.0% |
| GTTACAAATGCTGGATGCTG+TGG | + | chr4_4:73416625-73416644 | Msa0701960:CDS | 45.0% | |
| TGTGGAGTAGGAAGGAACAA+TGG | + | chr4_4:73416643-73416662 | Msa0701960:CDS | 45.0% | |
| TTACAGTGCTCAATCTCCAG+AGG | + | chr4_4:73416777-73416796 | Msa0701960:CDS | 45.0% | |
| TAGATCAGAGCTGAGCTAAG+TGG | - | chr4_4:73416825-73416844 | None:intergenic | 45.0% | |
| ! | TCAGCTCTGATCTATCAGCA+TGG | + | chr4_4:73416831-73416850 | Msa0701960:exon | 45.0% |
| ! | TATCAGCATGGTCTTGCTAG+TGG | + | chr4_4:73416843-73416862 | Msa0701960:three_prime_UTR | 45.0% |
| !!! | TTGTTTTTTTATAAAAAATT+GGG | - | chr4_4:73415316-73415335 | None:intergenic | 5.0% |
| !!! | TTTGTTTTTTTATAAAAAAT+TGG | - | chr4_4:73415317-73415336 | None:intergenic | 5.0% |
| GTGGTGAAGAGTGGCTAGAA+GGG | - | chr4_4:73414260-73414279 | None:intergenic | 50.0% | |
| !! | CTTGGTTTGTTGAGTGGGGT+TGG | + | chr4_4:73414342-73414361 | Msa0701960:CDS | 50.0% |
| ! | ACTTTGGTGGACCTACTGGA+AGG | + | chr4_4:73414478-73414497 | Msa0701960:CDS | 50.0% |
| TCACTAGCAGATGCATAGGG+TGG | - | chr4_4:73415808-73415827 | None:intergenic | 50.0% | |
| TGCAGCAGCTGGAATTAGAG+AGG | + | chr4_4:73415861-73415880 | Msa0701960:CDS | 50.0% | |
| TCCACACATGTTACGCCATC+CGG | - | chr4_4:73416351-73416370 | None:intergenic | 50.0% | |
| AATGCTGGATGCTGTGGAGT+AGG | + | chr4_4:73416631-73416650 | Msa0701960:CDS | 50.0% | |
| ! | GCTTTTCATCCGACTGAAGC+TGG | + | chr4_4:73416730-73416749 | Msa0701960:CDS | 50.0% |
| GGTGGTGAAGAGTGGCTAGA+AGG | - | chr4_4:73414261-73414280 | None:intergenic | 55.0% | |
| AGAGGAAACTGGACGGCAAC+TGG | + | chr4_4:73415879-73415898 | Msa0701960:CDS | 55.0% | |
| CCACACATGTTACGCCATCC+GGG | - | chr4_4:73416350-73416369 | None:intergenic | 55.0% | |
| CTGGATGCTGTGGAGTAGGA+AGG | + | chr4_4:73416635-73416654 | Msa0701960:CDS | 55.0% | |
| TTGGCTACAAGGAGCCCGGA+TGG | + | chr4_4:73416333-73416352 | Msa0701960:CDS | 60.0% | |
| CCCGGATGGCGTAACATGTG+TGG | + | chr4_4:73416347-73416366 | Msa0701960:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 73414185 | 73417049 | 73414185 | ID=Msa0701960;Name=Msa0701960 |
| chr4_4 | mRNA | 73414185 | 73417049 | 73414185 | ID=Msa0701960-mRNA-1;Parent=Msa0701960;Name=Msa0701960-mRNA-1;_AED=0.26;_eAED=0.26;_QI=109|1|1|1|1|1|4|209|363 |
| chr4_4 | exon | 73414185 | 73414534 | 73414185 | ID=Msa0701960-mRNA-1:exon:22590;Parent=Msa0701960-mRNA-1 |
| chr4_4 | exon | 73415776 | 73415900 | 73415776 | ID=Msa0701960-mRNA-1:exon:22591;Parent=Msa0701960-mRNA-1 |
| chr4_4 | exon | 73416015 | 73416516 | 73416015 | ID=Msa0701960-mRNA-1:exon:22592;Parent=Msa0701960-mRNA-1 |
| chr4_4 | exon | 73416617 | 73417049 | 73416617 | ID=Msa0701960-mRNA-1:exon:22593;Parent=Msa0701960-mRNA-1 |
| chr4_4 | five_prime_UTR | 73414185 | 73414293 | 73414185 | ID=Msa0701960-mRNA-1:five_prime_utr;Parent=Msa0701960-mRNA-1 |
| chr4_4 | CDS | 73414294 | 73414534 | 73414294 | ID=Msa0701960-mRNA-1:cds;Parent=Msa0701960-mRNA-1 |
| chr4_4 | CDS | 73415776 | 73415900 | 73415776 | ID=Msa0701960-mRNA-1:cds;Parent=Msa0701960-mRNA-1 |
| chr4_4 | CDS | 73416015 | 73416516 | 73416015 | ID=Msa0701960-mRNA-1:cds;Parent=Msa0701960-mRNA-1 |
| chr4_4 | CDS | 73416617 | 73416840 | 73416617 | ID=Msa0701960-mRNA-1:cds;Parent=Msa0701960-mRNA-1 |
| chr4_4 | three_prime_UTR | 73416841 | 73417049 | 73416841 | ID=Msa0701960-mRNA-1:three_prime_utr;Parent=Msa0701960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
