Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578320 | XP_003629880.1 | 97.521 | 363 | 9 | 0 | 1 | 363 | 1 | 363 | 0.0 | 726 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578320 | sp|Q9FK75|GDL82_ARATH | 68.539 | 356 | 111 | 1 | 9 | 363 | 7 | 362 | 0.0 | 520 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578320 | G7L7Z9 | 97.521 | 363 | 9 | 0 | 1 | 363 | 1 | 363 | 0.0 | 726 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0219190 | Msa0578320 | 0.807273 | 5.478978e-50 | -8.615850e-47 |
| Msa0578320 | Msa0601110 | 0.800287 | 1.546964e-48 | -8.615850e-47 |
| Msa0578320 | Msa0618170 | 0.923809 | 1.625726e-89 | -8.615850e-47 |
| Msa0578320 | Msa0641620 | 0.805203 | 1.495032e-49 | -8.615850e-47 |
| Msa0578320 | Msa0645930 | 0.805405 | 1.356025e-49 | -8.615850e-47 |
| Msa0578320 | Msa0688500 | 0.814470 | 1.515409e-51 | -8.615850e-47 |
| Msa0578320 | Msa0701960 | 0.919350 | 5.027515e-87 | -8.615850e-47 |
| Msa0578320 | Msa0843290 | 0.806882 | 6.629988e-50 | -8.615850e-47 |
| Msa0578320 | Msa0867350 | 0.806958 | 6.386579e-50 | -8.615850e-47 |
| Msa0578320 | Msa0872310 | 0.801639 | 8.187262e-49 | -8.615850e-47 |
| Msa0578320 | Msa0898730 | 0.811908 | 5.532297e-51 | -8.615850e-47 |
| Msa0578320 | Msa0929870 | 0.800110 | 1.680795e-48 | -8.615850e-47 |
| Msa0578320 | Msa0951460 | 0.812012 | 5.251432e-51 | -8.615850e-47 |
| Msa0578320 | Msa0951960 | 0.802016 | 6.852877e-49 | -8.615850e-47 |
| Msa0578320 | Msa1037900 | 0.825023 | 5.876762e-54 | -8.615850e-47 |
| Msa0578320 | Msa1041530 | 0.814710 | 1.341137e-51 | -8.615850e-47 |
| Msa0578320 | Msa1042670 | 0.824307 | 8.664621e-54 | -8.615850e-47 |
| Msa0578320 | Msa1081570 | 0.814001 | 1.924395e-51 | -8.615850e-47 |
| Msa0578320 | Msa1123880 | 0.826442 | 2.706642e-54 | -8.615850e-47 |
| Msa0578320 | Msa1127140 | 0.805746 | 1.150421e-49 | -8.615850e-47 |
| Msa0578320 | Msa1129960 | 0.838249 | 3.216497e-57 | -8.615850e-47 |
| Msa0578320 | Msa1129970 | 0.804837 | 1.783665e-49 | -8.615850e-47 |
| Msa0578320 | Msa1130010 | 0.807307 | 5.388289e-50 | -8.615850e-47 |
| Msa0578320 | Msa1169990 | 0.801393 | 9.197478e-49 | -8.615850e-47 |
| Msa0578320 | Msa1414930 | 0.803345 | 3.644546e-49 | -8.615850e-47 |
| Msa0578320 | Msa1420060 | 0.820451 | 6.810760e-53 | -8.615850e-47 |
| Msa0578320 | Msa1421550 | 0.804218 | 2.400620e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578320 | MtrunA17_Chr8g0380041 | 97.521 | 363 | 9 | 0 | 1 | 363 | 1 | 363 | 0.0 | 726 |
| Msa0578320 | MtrunA17_Chr3g0086641 | 74.722 | 360 | 88 | 3 | 6 | 363 | 12 | 370 | 0.0 | 560 |
| Msa0578320 | MtrunA17_Chr2g0285061 | 71.781 | 365 | 101 | 2 | 1 | 363 | 1 | 365 | 0.0 | 540 |
| Msa0578320 | MtrunA17_Chr3g0077581 | 57.353 | 340 | 139 | 5 | 28 | 363 | 33 | 370 | 6.88e-130 | 376 |
| Msa0578320 | MtrunA17_Chr3g0077571 | 52.691 | 353 | 160 | 7 | 12 | 363 | 11 | 357 | 1.05e-127 | 370 |
| Msa0578320 | MtrunA17_Chr8g0380031 | 48.563 | 348 | 155 | 6 | 23 | 363 | 76 | 406 | 1.18e-110 | 329 |
| Msa0578320 | MtrunA17_Chr2g0284991 | 47.139 | 367 | 179 | 7 | 3 | 362 | 1 | 359 | 4.57e-109 | 324 |
| Msa0578320 | MtrunA17_Chr3g0085881 | 48.071 | 337 | 161 | 6 | 27 | 362 | 29 | 352 | 1.99e-108 | 321 |
| Msa0578320 | MtrunA17_Chr2g0284951 | 46.995 | 366 | 178 | 7 | 1 | 362 | 1 | 354 | 6.43e-108 | 320 |
| Msa0578320 | MtrunA17_Chr2g0284921 | 47.674 | 344 | 167 | 6 | 24 | 363 | 27 | 361 | 2.95e-107 | 318 |
| Msa0578320 | MtrunA17_Chr3g0131321 | 43.666 | 371 | 191 | 7 | 7 | 362 | 1 | 368 | 1.24e-106 | 318 |
| Msa0578320 | MtrunA17_Chr2g0285001 | 47.606 | 355 | 174 | 8 | 12 | 362 | 14 | 360 | 4.64e-106 | 316 |
| Msa0578320 | MtrunA17_Chr4g0017431 | 43.014 | 365 | 200 | 6 | 4 | 363 | 2 | 363 | 1.34e-104 | 311 |
| Msa0578320 | MtrunA17_Chr2g0284941 | 45.652 | 368 | 160 | 10 | 4 | 362 | 2 | 338 | 6.11e-101 | 302 |
| Msa0578320 | MtrunA17_Chr5g0434621 | 44.828 | 319 | 165 | 9 | 33 | 346 | 27 | 339 | 5.63e-87 | 266 |
| Msa0578320 | MtrunA17_Chr2g0294301 | 39.833 | 359 | 207 | 7 | 8 | 362 | 14 | 367 | 9.02e-85 | 261 |
| Msa0578320 | MtrunA17_Chr2g0294311 | 37.736 | 371 | 214 | 7 | 5 | 362 | 6 | 372 | 6.37e-84 | 259 |
| Msa0578320 | MtrunA17_Chr4g0068441 | 40.118 | 339 | 196 | 6 | 28 | 362 | 32 | 367 | 4.00e-82 | 254 |
| Msa0578320 | MtrunA17_Chr7g0275011 | 38.375 | 357 | 212 | 6 | 11 | 363 | 14 | 366 | 7.73e-76 | 238 |
| Msa0578320 | MtrunA17_Chr7g0274991 | 36.364 | 363 | 225 | 5 | 4 | 363 | 6 | 365 | 3.55e-75 | 236 |
| Msa0578320 | MtrunA17_Chr7g0275021 | 36.620 | 355 | 217 | 6 | 13 | 363 | 16 | 366 | 3.74e-74 | 234 |
| Msa0578320 | MtrunA17_Chr8g0374101 | 36.565 | 361 | 206 | 8 | 15 | 363 | 27 | 376 | 1.89e-72 | 230 |
| Msa0578320 | MtrunA17_Chr1g0189901 | 39.117 | 317 | 186 | 5 | 32 | 344 | 32 | 345 | 9.23e-72 | 228 |
| Msa0578320 | MtrunA17_Chr1g0182811 | 36.639 | 363 | 222 | 6 | 6 | 363 | 8 | 367 | 2.39e-71 | 227 |
| Msa0578320 | MtrunA17_Chr5g0396511 | 36.036 | 333 | 206 | 5 | 33 | 361 | 48 | 377 | 7.05e-71 | 226 |
| Msa0578320 | MtrunA17_Chr1g0189931 | 38.066 | 331 | 197 | 6 | 32 | 358 | 33 | 359 | 7.98e-71 | 225 |
| Msa0578320 | MtrunA17_Chr7g0275001 | 36.034 | 358 | 221 | 6 | 11 | 363 | 4 | 358 | 1.15e-70 | 225 |
| Msa0578320 | MtrunA17_Chr4g0008851 | 36.499 | 337 | 206 | 6 | 32 | 363 | 33 | 366 | 4.34e-69 | 221 |
| Msa0578320 | MtrunA17_Chr3g0092131 | 37.870 | 338 | 196 | 9 | 10 | 340 | 3 | 333 | 1.21e-68 | 219 |
| Msa0578320 | MtrunA17_Chr6g0457921 | 37.500 | 336 | 198 | 7 | 11 | 339 | 9 | 339 | 4.37e-67 | 216 |
| Msa0578320 | MtrunA17_Chr1g0156911 | 35.756 | 344 | 207 | 6 | 1 | 334 | 1 | 340 | 4.82e-67 | 215 |
| Msa0578320 | MtrunA17_Chr3g0099161 | 36.216 | 370 | 210 | 10 | 8 | 363 | 69 | 426 | 1.22e-66 | 216 |
| Msa0578320 | MtrunA17_Chr4g0060811 | 38.535 | 314 | 182 | 7 | 33 | 340 | 29 | 337 | 2.30e-66 | 214 |
| Msa0578320 | MtrunA17_Chr1g0156921 | 34.770 | 348 | 202 | 7 | 1 | 334 | 10 | 346 | 5.65e-66 | 213 |
| Msa0578320 | MtrunA17_Chr3g0099151 | 36.267 | 375 | 208 | 11 | 6 | 363 | 62 | 422 | 1.03e-65 | 214 |
| Msa0578320 | MtrunA17_Chr5g0444401 | 35.440 | 364 | 212 | 10 | 11 | 360 | 5 | 359 | 1.12e-64 | 209 |
| Msa0578320 | MtrunA17_Chr1g0156901 | 36.774 | 310 | 188 | 5 | 29 | 334 | 48 | 353 | 6.39e-63 | 205 |
| Msa0578320 | MtrunA17_Chr1g0156931 | 35.045 | 331 | 205 | 6 | 7 | 333 | 18 | 342 | 7.25e-63 | 204 |
| Msa0578320 | MtrunA17_Chr4g0027521 | 36.364 | 352 | 199 | 10 | 16 | 355 | 12 | 350 | 4.58e-62 | 202 |
| Msa0578320 | MtrunA17_Chr7g0215961 | 33.428 | 353 | 217 | 7 | 13 | 363 | 16 | 352 | 6.25e-62 | 202 |
| Msa0578320 | MtrunA17_Chr5g0438621 | 34.821 | 336 | 206 | 7 | 12 | 340 | 11 | 340 | 1.09e-61 | 201 |
| Msa0578320 | MtrunA17_Chr1g0156891 | 35.736 | 333 | 202 | 7 | 10 | 334 | 19 | 347 | 4.95e-61 | 200 |
| Msa0578320 | MtrunA17_Chr3g0120861 | 36.677 | 319 | 191 | 7 | 28 | 340 | 35 | 348 | 7.75e-61 | 199 |
| Msa0578320 | MtrunA17_Chr1g0189891 | 35.440 | 364 | 213 | 12 | 9 | 363 | 6 | 356 | 8.77e-61 | 199 |
| Msa0578320 | MtrunA17_Chr2g0320671 | 35.312 | 337 | 204 | 8 | 10 | 340 | 12 | 340 | 1.42e-60 | 198 |
| Msa0578320 | MtrunA17_Chr5g0438641 | 36.686 | 338 | 197 | 9 | 12 | 341 | 15 | 343 | 4.33e-60 | 197 |
| Msa0578320 | MtrunA17_Chr3g0142921 | 34.412 | 340 | 208 | 8 | 6 | 334 | 5 | 340 | 6.89e-60 | 197 |
| Msa0578320 | MtrunA17_Chr5g0438631 | 34.604 | 341 | 211 | 8 | 7 | 340 | 4 | 339 | 9.24e-60 | 196 |
| Msa0578320 | MtrunA17_Chr3g0085231 | 34.511 | 368 | 216 | 9 | 1 | 362 | 1 | 349 | 7.57e-59 | 194 |
| Msa0578320 | MtrunA17_Chr2g0330781 | 37.538 | 325 | 185 | 10 | 26 | 340 | 26 | 342 | 2.24e-58 | 192 |
| Msa0578320 | MtrunA17_Chr8g0341001 | 36.070 | 341 | 201 | 10 | 10 | 340 | 10 | 343 | 5.62e-58 | 192 |
| Msa0578320 | MtrunA17_Chr5g0405831 | 34.006 | 347 | 214 | 8 | 6 | 341 | 14 | 356 | 5.99e-58 | 192 |
| Msa0578320 | MtrunA17_Chr3g0105401 | 34.694 | 343 | 212 | 8 | 6 | 340 | 1 | 339 | 1.14e-57 | 191 |
| Msa0578320 | MtrunA17_Chr3g0099231 | 32.337 | 368 | 216 | 12 | 11 | 363 | 12 | 361 | 3.23e-57 | 191 |
| Msa0578320 | MtrunA17_Chr3g0142941 | 33.548 | 310 | 198 | 5 | 29 | 334 | 45 | 350 | 9.88e-57 | 189 |
| Msa0578320 | MtrunA17_Chr8g0371491 | 34.012 | 344 | 214 | 7 | 6 | 340 | 7 | 346 | 3.84e-56 | 187 |
| Msa0578320 | MtrunA17_Chr5g0432101 | 35.016 | 317 | 193 | 8 | 33 | 341 | 35 | 346 | 4.34e-55 | 184 |
| Msa0578320 | MtrunA17_Chr5g0405821 | 33.046 | 348 | 217 | 9 | 6 | 341 | 14 | 357 | 1.05e-54 | 184 |
| Msa0578320 | MtrunA17_Chr2g0283191 | 30.682 | 352 | 219 | 9 | 4 | 335 | 6 | 352 | 1.95e-53 | 180 |
| Msa0578320 | MtrunA17_Chr8g0371481 | 31.595 | 326 | 215 | 6 | 30 | 350 | 40 | 362 | 2.46e-53 | 180 |
| Msa0578320 | MtrunA17_Chr8g0371471 | 30.982 | 326 | 216 | 6 | 30 | 350 | 40 | 361 | 1.76e-51 | 175 |
| Msa0578320 | MtrunA17_Chr5g0420811 | 32.092 | 349 | 209 | 11 | 10 | 348 | 10 | 340 | 2.97e-51 | 174 |
| Msa0578320 | MtrunA17_Chr8g0370951 | 31.937 | 382 | 225 | 11 | 1 | 362 | 1 | 367 | 1.10e-50 | 173 |
| Msa0578320 | MtrunA17_Chr5g0437421 | 32.817 | 323 | 201 | 8 | 28 | 339 | 29 | 346 | 7.68e-48 | 166 |
| Msa0578320 | MtrunA17_Chr4g0046151 | 30.571 | 350 | 222 | 10 | 7 | 342 | 15 | 357 | 8.54e-48 | 166 |
| Msa0578320 | MtrunA17_Chr6g0459921 | 34.818 | 247 | 156 | 4 | 118 | 363 | 119 | 361 | 1.47e-46 | 162 |
| Msa0578320 | MtrunA17_Chr2g0301641 | 35.463 | 313 | 181 | 11 | 33 | 333 | 45 | 348 | 2.52e-46 | 162 |
| Msa0578320 | MtrunA17_Chr6g0455661 | 36.975 | 238 | 134 | 4 | 138 | 363 | 239 | 472 | 2.85e-46 | 164 |
| Msa0578320 | MtrunA17_Chr6g0455661 | 48.438 | 128 | 64 | 2 | 1 | 127 | 1 | 127 | 1.44e-27 | 112 |
| Msa0578320 | MtrunA17_Chr2g0284931 | 36.626 | 243 | 127 | 5 | 122 | 363 | 4 | 220 | 1.49e-45 | 155 |
| Msa0578320 | MtrunA17_Chr8g0344941 | 30.530 | 321 | 209 | 7 | 33 | 345 | 43 | 357 | 6.25e-45 | 158 |
| Msa0578320 | MtrunA17_Chr1g0157001 | 31.546 | 317 | 196 | 7 | 36 | 346 | 41 | 342 | 7.08e-42 | 150 |
| Msa0578320 | MtrunA17_Chr8g0349341 | 31.790 | 324 | 198 | 9 | 33 | 346 | 39 | 349 | 1.40e-41 | 149 |
| Msa0578320 | MtrunA17_Chr8g0370981 | 29.197 | 411 | 226 | 11 | 8 | 361 | 15 | 417 | 2.70e-41 | 149 |
| Msa0578320 | MtrunA17_Chr8g0349321 | 31.481 | 324 | 199 | 9 | 33 | 346 | 39 | 349 | 5.98e-41 | 147 |
| Msa0578320 | MtrunA17_Chr8g0344931 | 30.178 | 338 | 214 | 12 | 33 | 363 | 39 | 361 | 3.90e-36 | 134 |
| Msa0578320 | MtrunA17_Chr1g0160101 | 26.842 | 380 | 235 | 9 | 9 | 358 | 20 | 386 | 2.18e-34 | 130 |
| Msa0578320 | MtrunA17_Chr2g0285041 | 44.355 | 124 | 68 | 1 | 83 | 205 | 1 | 124 | 4.70e-33 | 120 |
| Msa0578320 | MtrunA17_Chr8g0370961 | 30.672 | 238 | 150 | 6 | 128 | 361 | 17 | 243 | 7.44e-33 | 122 |
| Msa0578320 | MtrunA17_Chr8g0349301 | 29.102 | 323 | 200 | 9 | 1 | 310 | 1 | 307 | 2.22e-32 | 123 |
| Msa0578320 | MtrunA17_Chr1g0160031 | 29.050 | 358 | 220 | 11 | 7 | 339 | 13 | 361 | 2.77e-32 | 124 |
| Msa0578320 | MtrunA17_Chr8g0349331 | 26.667 | 360 | 207 | 10 | 1 | 346 | 1 | 317 | 9.30e-31 | 119 |
| Msa0578320 | MtrunA17_Chr1g0160011 | 27.298 | 359 | 226 | 10 | 7 | 339 | 13 | 362 | 9.32e-31 | 120 |
| Msa0578320 | MtrunA17_Chr7g0229591 | 38.144 | 194 | 109 | 6 | 10 | 199 | 12 | 198 | 1.03e-30 | 116 |
| Msa0578320 | MtrunA17_Chr7g0254461 | 26.944 | 360 | 225 | 10 | 28 | 358 | 40 | 390 | 1.22e-30 | 120 |
| Msa0578320 | MtrunA17_Chr5g0440501 | 28.049 | 246 | 165 | 5 | 128 | 362 | 6 | 250 | 2.05e-30 | 116 |
| Msa0578320 | MtrunA17_Chr1g0159991 | 27.100 | 369 | 227 | 10 | 1 | 339 | 4 | 360 | 1.03e-29 | 117 |
| Msa0578320 | MtrunA17_Chr8g0381581 | 27.568 | 370 | 220 | 12 | 6 | 342 | 16 | 370 | 2.56e-29 | 116 |
| Msa0578320 | MtrunA17_Chr6g0450721 | 27.807 | 374 | 232 | 12 | 1 | 355 | 1 | 355 | 9.36e-28 | 112 |
| Msa0578320 | MtrunA17_Chr4g0027571 | 31.429 | 210 | 140 | 3 | 131 | 339 | 3 | 209 | 1.71e-27 | 108 |
| Msa0578320 | MtrunA17_Chr6g0450731 | 26.724 | 348 | 211 | 10 | 30 | 355 | 32 | 357 | 3.55e-27 | 110 |
| Msa0578320 | MtrunA17_Chr8g0347751 | 26.786 | 336 | 210 | 9 | 33 | 341 | 38 | 364 | 5.35e-27 | 110 |
| Msa0578320 | MtrunA17_Chr2g0283511 | 27.945 | 365 | 228 | 12 | 1 | 340 | 1 | 355 | 9.77e-27 | 109 |
| Msa0578320 | MtrunA17_Chr7g0275291 | 25.000 | 376 | 240 | 12 | 7 | 354 | 9 | 370 | 9.78e-27 | 109 |
| Msa0578320 | MtrunA17_Chr1g0159981 | 25.199 | 377 | 246 | 10 | 7 | 356 | 20 | 387 | 3.65e-26 | 108 |
| Msa0578320 | MtrunA17_Chr7g0273101 | 26.870 | 361 | 227 | 10 | 30 | 363 | 28 | 378 | 4.03e-26 | 107 |
| Msa0578320 | MtrunA17_Chr4g0057991 | 26.124 | 356 | 231 | 11 | 6 | 340 | 12 | 356 | 5.76e-26 | 107 |
| Msa0578320 | MtrunA17_Chr7g0271551 | 27.647 | 340 | 214 | 10 | 22 | 346 | 29 | 351 | 6.23e-26 | 107 |
| Msa0578320 | MtrunA17_Chr3g0104821 | 25.959 | 339 | 205 | 12 | 33 | 341 | 46 | 368 | 3.06e-25 | 105 |
| Msa0578320 | MtrunA17_Chr7g0226941 | 27.401 | 354 | 218 | 11 | 30 | 355 | 32 | 374 | 1.66e-24 | 103 |
| Msa0578320 | MtrunA17_Chr6g0469511 | 44.348 | 115 | 59 | 3 | 26 | 136 | 25 | 138 | 2.35e-24 | 97.1 |
| Msa0578320 | MtrunA17_Chr1g0159971 | 28.107 | 338 | 197 | 11 | 33 | 339 | 49 | 371 | 4.93e-24 | 102 |
| Msa0578320 | MtrunA17_Chr4g0027561 | 45.690 | 116 | 56 | 3 | 10 | 121 | 12 | 124 | 1.05e-23 | 95.5 |
| Msa0578320 | MtrunA17_Chr6g0450701 | 29.032 | 341 | 201 | 12 | 28 | 342 | 36 | 361 | 2.30e-23 | 99.8 |
| Msa0578320 | MtrunA17_Chr8g0352901 | 27.273 | 363 | 224 | 11 | 13 | 345 | 6 | 358 | 4.66e-23 | 99.0 |
| Msa0578320 | MtrunA17_Chr7g0226911 | 22.997 | 387 | 244 | 10 | 10 | 355 | 7 | 380 | 5.54e-23 | 99.0 |
| Msa0578320 | MtrunA17_Chr6g0450711 | 26.593 | 361 | 206 | 12 | 30 | 355 | 121 | 457 | 6.36e-23 | 99.8 |
| Msa0578320 | MtrunA17_Chr7g0226931 | 23.058 | 412 | 256 | 13 | 1 | 363 | 1 | 400 | 1.18e-22 | 98.2 |
| Msa0578320 | MtrunA17_Chr2g0301581 | 26.374 | 364 | 222 | 14 | 1 | 341 | 1 | 341 | 1.72e-22 | 97.1 |
| Msa0578320 | MtrunA17_Chr2g0317261 | 26.099 | 364 | 215 | 14 | 7 | 341 | 1 | 339 | 2.85e-22 | 96.7 |
| Msa0578320 | MtrunA17_Chr2g0317271 | 26.374 | 364 | 214 | 14 | 7 | 341 | 1 | 339 | 4.56e-22 | 95.9 |
| Msa0578320 | MtrunA17_Chr1g0189911 | 32.168 | 143 | 94 | 3 | 217 | 358 | 1 | 141 | 4.71e-22 | 91.3 |
| Msa0578320 | MtrunA17_Chr0c01g0489581 | 25.967 | 362 | 216 | 13 | 7 | 341 | 3 | 339 | 6.29e-22 | 95.5 |
| Msa0578320 | MtrunA17_Chr0c01g0489571 | 25.967 | 362 | 216 | 13 | 7 | 341 | 3 | 339 | 1.34e-21 | 94.7 |
| Msa0578320 | MtrunA17_Chr2g0283481 | 25.627 | 359 | 232 | 14 | 6 | 340 | 22 | 369 | 1.48e-21 | 95.1 |
| Msa0578320 | MtrunA17_Chr2g0301541 | 26.099 | 364 | 223 | 14 | 1 | 341 | 1 | 341 | 2.30e-21 | 94.0 |
| Msa0578320 | MtrunA17_Chr1g0191461 | 26.239 | 343 | 209 | 11 | 30 | 342 | 30 | 358 | 4.15e-21 | 93.2 |
| Msa0578320 | MtrunA17_Chr2g0321991 | 46.847 | 111 | 51 | 5 | 10 | 113 | 10 | 119 | 6.03e-21 | 87.4 |
| Msa0578320 | MtrunA17_Chr1g0178941 | 24.768 | 323 | 200 | 12 | 33 | 335 | 42 | 341 | 9.92e-21 | 92.0 |
| Msa0578320 | MtrunA17_Chr1g0178931 | 26.562 | 320 | 190 | 14 | 33 | 335 | 39 | 330 | 2.39e-20 | 90.9 |
| Msa0578320 | MtrunA17_Chr2g0283501 | 26.724 | 348 | 221 | 13 | 13 | 336 | 13 | 350 | 3.73e-20 | 90.9 |
| Msa0578320 | MtrunA17_Chr3g0112821 | 25.309 | 324 | 218 | 10 | 33 | 341 | 32 | 346 | 7.46e-20 | 89.7 |
| Msa0578320 | MtrunA17_Chr7g0229581 | 33.333 | 144 | 95 | 1 | 206 | 348 | 8 | 151 | 7.91e-20 | 85.5 |
| Msa0578320 | MtrunA17_Chr1g0189921 | 48.958 | 96 | 44 | 3 | 31 | 122 | 31 | 125 | 1.04e-18 | 82.0 |
| Msa0578320 | MtrunA17_Chr7g0228261 | 41.111 | 90 | 52 | 1 | 274 | 363 | 4 | 92 | 3.45e-18 | 79.0 |
| Msa0578320 | MtrunA17_Chr3g0093031 | 25.075 | 335 | 210 | 13 | 33 | 341 | 32 | 351 | 4.62e-18 | 84.7 |
| Msa0578320 | MtrunA17_Chr7g0266061 | 26.433 | 314 | 199 | 12 | 33 | 335 | 44 | 336 | 8.31e-18 | 83.6 |
| Msa0578320 | MtrunA17_Chr8g0339251 | 27.707 | 314 | 193 | 11 | 13 | 310 | 6 | 301 | 4.76e-17 | 81.3 |
| Msa0578320 | MtrunA17_Chr8g0370971 | 45.000 | 100 | 47 | 2 | 30 | 121 | 37 | 136 | 8.11e-17 | 77.4 |
| Msa0578320 | MtrunA17_Chr2g0283531 | 26.048 | 334 | 210 | 15 | 33 | 341 | 33 | 354 | 1.20e-16 | 80.5 |
| Msa0578320 | MtrunA17_Chr2g0285051 | 63.793 | 58 | 20 | 1 | 28 | 84 | 33 | 90 | 2.77e-15 | 71.6 |
| Msa0578320 | MtrunA17_Chr4g0018571 | 31.126 | 151 | 97 | 3 | 200 | 346 | 25 | 172 | 3.91e-15 | 72.8 |
| Msa0578320 | MtrunA17_Chr3g0112691 | 25.223 | 337 | 205 | 12 | 33 | 341 | 32 | 349 | 3.82e-14 | 72.8 |
| Msa0578320 | MtrunA17_Chr2g0301591 | 26.316 | 304 | 188 | 12 | 1 | 289 | 1 | 283 | 6.44e-14 | 71.2 |
| Msa0578320 | MtrunA17_Chr2g0308201 | 44.048 | 84 | 46 | 1 | 1 | 83 | 5 | 88 | 1.52e-13 | 65.9 |
| Msa0578320 | MtrunA17_Chr4g0018561 | 58.182 | 55 | 21 | 1 | 26 | 78 | 25 | 79 | 2.01e-13 | 65.9 |
| Msa0578320 | MtrunA17_Chr3g0096551 | 23.143 | 350 | 210 | 13 | 33 | 341 | 31 | 362 | 3.69e-13 | 70.1 |
| Msa0578320 | MtrunA17_Chr3g0104831 | 22.794 | 272 | 168 | 9 | 97 | 341 | 31 | 287 | 8.34e-13 | 68.6 |
| Msa0578320 | MtrunA17_Chr2g0285031 | 45.946 | 74 | 36 | 3 | 290 | 362 | 7 | 77 | 9.71e-13 | 63.2 |
| Msa0578320 | MtrunA17_Chr1g0198391 | 22.874 | 341 | 195 | 11 | 33 | 335 | 35 | 345 | 1.03e-11 | 65.5 |
| Msa0578320 | MtrunA17_Chr2g0284981 | 41.026 | 78 | 36 | 3 | 289 | 362 | 8 | 79 | 1.41e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0578320 | AT1G29670.2 | 67.213 | 366 | 116 | 2 | 1 | 363 | 67 | 431 | 0.0 | 521 |
| Msa0578320 | AT5G45670.1 | 68.539 | 356 | 111 | 1 | 9 | 363 | 7 | 362 | 0.0 | 520 |
| Msa0578320 | AT1G29670.1 | 67.582 | 364 | 114 | 2 | 3 | 363 | 1 | 363 | 0.0 | 519 |
| Msa0578320 | AT4G18970.1 | 73.156 | 339 | 90 | 1 | 26 | 363 | 23 | 361 | 0.0 | 517 |
| Msa0578320 | AT4G18970.2 | 72.941 | 340 | 91 | 1 | 25 | 363 | 22 | 361 | 0.0 | 516 |
| Msa0578320 | AT1G29660.1 | 67.887 | 355 | 114 | 0 | 9 | 363 | 10 | 364 | 0.0 | 513 |
| Msa0578320 | AT1G33811.1 | 51.882 | 372 | 168 | 6 | 1 | 363 | 1 | 370 | 4.42e-130 | 377 |
| Msa0578320 | AT1G71691.2 | 50.000 | 340 | 164 | 6 | 25 | 363 | 49 | 383 | 1.40e-116 | 343 |
| Msa0578320 | AT5G08460.1 | 46.027 | 365 | 187 | 6 | 6 | 363 | 24 | 385 | 1.18e-112 | 333 |
| Msa0578320 | AT5G15720.1 | 48.680 | 341 | 169 | 5 | 27 | 363 | 26 | 364 | 3.20e-111 | 329 |
| Msa0578320 | AT1G71250.1 | 45.125 | 359 | 190 | 6 | 9 | 363 | 18 | 373 | 2.29e-106 | 317 |
| Msa0578320 | AT2G19010.1 | 43.417 | 357 | 176 | 8 | 12 | 362 | 11 | 347 | 2.50e-96 | 290 |
| Msa0578320 | AT2G19010.2 | 44.868 | 341 | 162 | 8 | 28 | 362 | 57 | 377 | 4.26e-96 | 291 |
| Msa0578320 | AT2G19050.1 | 45.029 | 342 | 162 | 7 | 28 | 363 | 28 | 349 | 7.81e-96 | 289 |
| Msa0578320 | AT2G19060.1 | 43.266 | 349 | 173 | 8 | 3 | 345 | 6 | 335 | 1.43e-90 | 276 |
| Msa0578320 | AT1G71691.1 | 45.775 | 284 | 149 | 5 | 80 | 363 | 4 | 282 | 3.93e-88 | 267 |
| Msa0578320 | AT4G30140.1 | 45.808 | 334 | 163 | 7 | 28 | 360 | 30 | 346 | 4.98e-87 | 266 |
| Msa0578320 | AT5G15720.3 | 44.792 | 288 | 153 | 5 | 80 | 363 | 48 | 333 | 2.98e-82 | 254 |
| Msa0578320 | AT1G71691.3 | 49.438 | 267 | 130 | 5 | 25 | 290 | 49 | 311 | 3.10e-82 | 253 |
| Msa0578320 | AT2G19050.2 | 47.547 | 265 | 123 | 4 | 28 | 291 | 28 | 277 | 6.91e-81 | 249 |
| Msa0578320 | AT5G15720.2 | 48.134 | 268 | 134 | 4 | 27 | 290 | 26 | 292 | 4.45e-80 | 248 |
| Msa0578320 | AT5G37690.1 | 40.407 | 344 | 194 | 8 | 6 | 344 | 2 | 339 | 1.66e-78 | 245 |
| Msa0578320 | AT2G23540.1 | 39.359 | 343 | 191 | 7 | 33 | 363 | 50 | 387 | 8.54e-78 | 244 |
| Msa0578320 | AT5G33370.1 | 38.739 | 333 | 196 | 6 | 32 | 360 | 31 | 359 | 9.33e-76 | 238 |
| Msa0578320 | AT3G50400.1 | 39.474 | 342 | 193 | 9 | 33 | 363 | 36 | 374 | 2.02e-74 | 235 |
| Msa0578320 | AT5G37690.2 | 38.953 | 344 | 191 | 9 | 6 | 344 | 2 | 331 | 8.83e-74 | 233 |
| Msa0578320 | AT4G10950.2 | 36.176 | 340 | 210 | 5 | 27 | 362 | 67 | 403 | 9.48e-73 | 232 |
| Msa0578320 | AT3G04290.1 | 37.463 | 339 | 200 | 7 | 27 | 358 | 23 | 356 | 6.00e-70 | 223 |
| Msa0578320 | AT4G10950.1 | 35.882 | 340 | 207 | 6 | 27 | 362 | 67 | 399 | 7.88e-70 | 224 |
| Msa0578320 | AT4G28780.1 | 37.612 | 335 | 203 | 5 | 32 | 363 | 32 | 363 | 1.55e-68 | 220 |
| Msa0578320 | AT1G74460.1 | 37.574 | 338 | 197 | 10 | 10 | 340 | 3 | 333 | 2.19e-65 | 212 |
| Msa0578320 | AT5G18430.1 | 35.826 | 321 | 201 | 3 | 32 | 348 | 29 | 348 | 6.50e-64 | 207 |
| Msa0578320 | AT3G53100.1 | 37.539 | 317 | 189 | 6 | 29 | 340 | 27 | 339 | 2.61e-63 | 206 |
| Msa0578320 | AT2G04570.1 | 35.714 | 350 | 211 | 8 | 8 | 350 | 6 | 348 | 1.28e-62 | 204 |
| Msa0578320 | AT5G41890.1 | 36.963 | 349 | 196 | 10 | 33 | 363 | 33 | 375 | 1.82e-62 | 204 |
| Msa0578320 | AT5G03820.2 | 35.897 | 351 | 209 | 9 | 3 | 341 | 28 | 374 | 4.09e-62 | 204 |
| Msa0578320 | AT5G03820.1 | 36.023 | 347 | 206 | 9 | 7 | 341 | 4 | 346 | 1.68e-61 | 201 |
| Msa0578320 | AT5G03810.1 | 36.550 | 342 | 206 | 8 | 7 | 341 | 5 | 342 | 4.31e-61 | 200 |
| Msa0578320 | AT5G22810.1 | 34.473 | 351 | 215 | 9 | 1 | 340 | 1 | 347 | 1.06e-60 | 199 |
| Msa0578320 | AT5G55050.1 | 37.462 | 331 | 187 | 10 | 18 | 335 | 26 | 349 | 1.34e-60 | 199 |
| Msa0578320 | AT2G42990.1 | 34.503 | 342 | 207 | 9 | 12 | 345 | 11 | 343 | 4.75e-60 | 197 |
| Msa0578320 | AT5G42170.1 | 33.856 | 319 | 199 | 6 | 29 | 342 | 48 | 359 | 5.03e-58 | 192 |
| Msa0578320 | AT4G16230.1 | 43.498 | 223 | 122 | 3 | 25 | 244 | 24 | 245 | 4.39e-57 | 186 |
| Msa0578320 | AT2G31540.1 | 35.647 | 317 | 193 | 8 | 25 | 334 | 29 | 341 | 1.04e-56 | 189 |
| Msa0578320 | AT1G75880.1 | 34.451 | 328 | 206 | 6 | 20 | 341 | 41 | 365 | 1.18e-56 | 189 |
| Msa0578320 | AT4G26790.1 | 34.161 | 322 | 201 | 7 | 28 | 343 | 26 | 342 | 1.23e-56 | 188 |
| Msa0578320 | AT4G26790.2 | 34.161 | 322 | 201 | 7 | 28 | 343 | 26 | 342 | 1.23e-56 | 188 |
| Msa0578320 | AT1G75880.2 | 34.756 | 328 | 204 | 7 | 20 | 341 | 41 | 364 | 1.60e-56 | 189 |
| Msa0578320 | AT3G16370.1 | 36.677 | 319 | 190 | 8 | 29 | 340 | 28 | 341 | 1.90e-56 | 188 |
| Msa0578320 | AT1G06990.1 | 35.535 | 318 | 193 | 7 | 30 | 340 | 36 | 348 | 4.46e-56 | 187 |
| Msa0578320 | AT2G30310.1 | 33.807 | 352 | 207 | 10 | 9 | 341 | 8 | 352 | 2.24e-55 | 186 |
| Msa0578320 | AT2G30220.1 | 33.708 | 356 | 201 | 11 | 9 | 341 | 8 | 351 | 5.92e-55 | 184 |
| Msa0578320 | AT1G58430.1 | 33.951 | 324 | 198 | 9 | 27 | 338 | 31 | 350 | 9.44e-55 | 184 |
| Msa0578320 | AT1G75890.2 | 34.783 | 322 | 198 | 8 | 30 | 344 | 46 | 362 | 2.62e-54 | 183 |
| Msa0578320 | AT1G75890.3 | 34.783 | 322 | 198 | 8 | 30 | 344 | 75 | 391 | 4.18e-54 | 183 |
| Msa0578320 | AT2G24560.1 | 33.962 | 318 | 197 | 9 | 25 | 334 | 28 | 340 | 4.18e-54 | 182 |
| Msa0578320 | AT5G33370.2 | 38.636 | 264 | 155 | 5 | 31 | 290 | 30 | 290 | 8.18e-54 | 181 |
| Msa0578320 | AT1G75900.1 | 33.022 | 321 | 203 | 7 | 20 | 333 | 30 | 345 | 1.44e-53 | 181 |
| Msa0578320 | AT3G14820.1 | 32.812 | 320 | 200 | 8 | 29 | 342 | 30 | 340 | 4.26e-53 | 179 |
| Msa0578320 | AT1G20120.1 | 32.308 | 325 | 197 | 8 | 30 | 342 | 77 | 390 | 3.04e-52 | 178 |
| Msa0578320 | AT5G63170.1 | 33.762 | 311 | 185 | 8 | 28 | 333 | 25 | 319 | 3.91e-52 | 176 |
| Msa0578320 | AT2G03980.2 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 4.91e-52 | 177 |
| Msa0578320 | AT2G03980.3 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 4.91e-52 | 177 |
| Msa0578320 | AT2G03980.1 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 4.91e-52 | 177 |
| Msa0578320 | AT2G03980.4 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 4.91e-52 | 177 |
| Msa0578320 | AT1G75890.1 | 33.234 | 334 | 200 | 8 | 30 | 344 | 46 | 375 | 1.81e-51 | 176 |
| Msa0578320 | AT1G20132.1 | 33.228 | 316 | 196 | 7 | 26 | 333 | 56 | 364 | 7.87e-51 | 174 |
| Msa0578320 | AT1G73610.1 | 33.233 | 331 | 183 | 10 | 29 | 350 | 33 | 334 | 1.15e-50 | 172 |
| Msa0578320 | AT1G59406.1 | 31.897 | 348 | 208 | 11 | 7 | 340 | 5 | 337 | 3.80e-49 | 169 |
| Msa0578320 | AT1G59030.1 | 31.897 | 348 | 208 | 11 | 7 | 340 | 5 | 337 | 3.80e-49 | 169 |
| Msa0578320 | AT1G58725.1 | 31.897 | 348 | 208 | 11 | 7 | 340 | 5 | 337 | 3.80e-49 | 169 |
| Msa0578320 | AT1G23500.1 | 33.229 | 319 | 192 | 7 | 29 | 342 | 33 | 335 | 9.31e-49 | 168 |
| Msa0578320 | AT1G20135.1 | 32.013 | 303 | 187 | 7 | 35 | 333 | 33 | 320 | 1.29e-48 | 167 |
| Msa0578320 | AT5G45950.1 | 29.651 | 344 | 229 | 9 | 11 | 350 | 20 | 354 | 9.50e-47 | 163 |
| Msa0578320 | AT2G40250.1 | 29.129 | 333 | 221 | 6 | 27 | 349 | 32 | 359 | 9.69e-47 | 163 |
| Msa0578320 | AT1G20130.2 | 31.940 | 335 | 194 | 9 | 29 | 346 | 182 | 499 | 7.11e-46 | 164 |
| Msa0578320 | AT1G20130.1 | 31.940 | 335 | 194 | 9 | 29 | 346 | 202 | 519 | 1.12e-45 | 164 |
| Msa0578320 | AT1G58520.3 | 30.488 | 328 | 197 | 10 | 24 | 340 | 23 | 330 | 1.25e-43 | 154 |
| Msa0578320 | AT1G58525.1 | 30.488 | 328 | 197 | 10 | 24 | 340 | 23 | 330 | 1.25e-43 | 154 |
| Msa0578320 | AT1G75930.1 | 30.233 | 344 | 213 | 10 | 6 | 341 | 8 | 332 | 3.74e-42 | 150 |
| Msa0578320 | AT3G43570.1 | 28.655 | 342 | 199 | 8 | 6 | 340 | 5 | 308 | 1.14e-41 | 148 |
| Msa0578320 | AT5G45960.1 | 28.889 | 315 | 209 | 8 | 29 | 333 | 45 | 354 | 1.18e-41 | 150 |
| Msa0578320 | AT1G75920.2 | 29.107 | 347 | 219 | 9 | 9 | 342 | 1 | 333 | 1.57e-41 | 149 |
| Msa0578320 | AT3G14225.2 | 30.409 | 342 | 220 | 9 | 33 | 363 | 39 | 373 | 1.18e-38 | 142 |
| Msa0578320 | AT1G53920.1 | 28.775 | 351 | 230 | 9 | 25 | 363 | 42 | 384 | 2.56e-38 | 141 |
| Msa0578320 | AT3G14225.1 | 30.233 | 344 | 222 | 9 | 33 | 363 | 39 | 377 | 3.35e-38 | 140 |
| Msa0578320 | AT1G71120.1 | 29.619 | 341 | 219 | 10 | 29 | 361 | 29 | 356 | 4.00e-38 | 140 |
| Msa0578320 | AT2G24560.2 | 32.130 | 277 | 177 | 8 | 25 | 294 | 28 | 300 | 1.48e-37 | 137 |
| Msa0578320 | AT1G75920.1 | 28.358 | 335 | 204 | 9 | 30 | 342 | 23 | 343 | 1.53e-37 | 138 |
| Msa0578320 | AT2G04020.1 | 38.967 | 213 | 115 | 6 | 30 | 236 | 42 | 245 | 6.68e-37 | 134 |
| Msa0578320 | AT1G75910.1 | 28.613 | 346 | 222 | 9 | 9 | 342 | 1 | 333 | 1.79e-36 | 135 |
| Msa0578320 | AT5G40990.1 | 29.846 | 325 | 211 | 9 | 33 | 346 | 39 | 357 | 2.30e-35 | 133 |
| Msa0578320 | AT2G04020.2 | 39.130 | 207 | 111 | 6 | 30 | 230 | 42 | 239 | 5.06e-35 | 131 |
| Msa0578320 | AT1G53940.2 | 30.909 | 330 | 201 | 11 | 33 | 346 | 41 | 359 | 8.09e-35 | 131 |
| Msa0578320 | AT3G43550.1 | 29.966 | 297 | 181 | 9 | 6 | 290 | 5 | 286 | 9.55e-34 | 127 |
| Msa0578320 | AT1G53990.1 | 27.778 | 342 | 222 | 9 | 33 | 363 | 37 | 364 | 8.64e-32 | 123 |
| Msa0578320 | AT1G75920.3 | 26.377 | 345 | 200 | 9 | 9 | 342 | 1 | 302 | 9.25e-32 | 122 |
| Msa0578320 | AT1G75920.4 | 27.797 | 295 | 192 | 8 | 55 | 342 | 25 | 305 | 1.18e-31 | 122 |
| Msa0578320 | AT3G05180.1 | 28.895 | 353 | 218 | 11 | 30 | 357 | 35 | 379 | 6.11e-30 | 118 |
| Msa0578320 | AT2G31550.1 | 30.332 | 211 | 140 | 5 | 135 | 342 | 2 | 208 | 1.04e-29 | 114 |
| Msa0578320 | AT1G54020.2 | 25.549 | 364 | 237 | 10 | 6 | 360 | 8 | 346 | 9.88e-29 | 115 |
| Msa0578320 | AT4G16233.1 | 41.860 | 129 | 73 | 2 | 236 | 363 | 3 | 130 | 3.36e-28 | 107 |
| Msa0578320 | AT3G48460.1 | 28.399 | 331 | 201 | 14 | 33 | 340 | 40 | 357 | 5.84e-28 | 113 |
| Msa0578320 | AT1G56670.1 | 25.275 | 364 | 243 | 9 | 7 | 354 | 16 | 366 | 9.40e-28 | 112 |
| Msa0578320 | AT1G54030.1 | 27.761 | 335 | 213 | 11 | 33 | 363 | 54 | 363 | 1.44e-27 | 112 |
| Msa0578320 | AT1G54790.3 | 25.538 | 372 | 232 | 11 | 7 | 347 | 8 | 365 | 4.83e-27 | 110 |
| Msa0578320 | AT3G27950.1 | 26.796 | 362 | 220 | 11 | 10 | 342 | 8 | 353 | 1.68e-26 | 108 |
| Msa0578320 | AT1G31550.2 | 27.042 | 355 | 218 | 13 | 35 | 363 | 40 | 379 | 8.66e-26 | 107 |
| Msa0578320 | AT1G67830.1 | 27.666 | 347 | 200 | 12 | 28 | 339 | 27 | 357 | 1.34e-25 | 106 |
| Msa0578320 | AT1G28650.1 | 28.012 | 332 | 203 | 13 | 35 | 341 | 41 | 361 | 4.96e-25 | 105 |
| Msa0578320 | AT1G28570.1 | 25.064 | 391 | 242 | 17 | 3 | 361 | 5 | 376 | 7.64e-25 | 104 |
| Msa0578320 | AT1G54790.1 | 25.401 | 374 | 234 | 11 | 7 | 347 | 3 | 364 | 8.15e-25 | 104 |
| Msa0578320 | AT1G09390.1 | 26.176 | 340 | 224 | 9 | 30 | 354 | 36 | 363 | 8.55e-25 | 104 |
| Msa0578320 | AT1G28600.1 | 26.519 | 362 | 235 | 14 | 1 | 340 | 1 | 353 | 1.11e-24 | 104 |
| Msa0578320 | AT1G54000.1 | 25.737 | 373 | 232 | 12 | 8 | 360 | 7 | 354 | 1.18e-24 | 103 |
| Msa0578320 | AT1G53940.1 | 30.597 | 268 | 165 | 10 | 33 | 290 | 41 | 297 | 2.41e-24 | 101 |
| Msa0578320 | AT1G54010.1 | 24.725 | 364 | 245 | 9 | 6 | 360 | 11 | 354 | 6.65e-24 | 102 |
| Msa0578320 | AT4G01130.1 | 25.210 | 357 | 227 | 12 | 10 | 336 | 11 | 357 | 8.04e-24 | 101 |
| Msa0578320 | AT5G14450.1 | 26.203 | 374 | 235 | 12 | 12 | 355 | 20 | 382 | 2.29e-23 | 100 |
| Msa0578320 | AT4G16220.1 | 49.533 | 107 | 50 | 2 | 9 | 113 | 10 | 114 | 2.87e-23 | 97.4 |
| Msa0578320 | AT3G14220.1 | 27.869 | 366 | 224 | 15 | 13 | 360 | 7 | 350 | 4.52e-23 | 99.4 |
| Msa0578320 | AT3G62280.1 | 26.462 | 325 | 216 | 10 | 28 | 340 | 33 | 346 | 9.38e-23 | 98.6 |
| Msa0578320 | AT1G28580.1 | 25.150 | 334 | 210 | 12 | 35 | 341 | 41 | 361 | 9.77e-23 | 98.6 |
| Msa0578320 | AT1G31550.1 | 25.989 | 354 | 220 | 13 | 35 | 363 | 40 | 376 | 1.59e-22 | 98.2 |
| Msa0578320 | AT1G28640.1 | 26.727 | 333 | 206 | 13 | 35 | 341 | 39 | 359 | 4.75e-22 | 96.7 |
| Msa0578320 | AT1G28660.1 | 27.596 | 337 | 198 | 14 | 35 | 341 | 39 | 359 | 9.34e-22 | 95.9 |
| Msa0578320 | AT5G03610.1 | 26.168 | 321 | 194 | 13 | 33 | 335 | 45 | 340 | 1.53e-21 | 94.7 |
| Msa0578320 | AT1G28590.1 | 25.745 | 369 | 237 | 15 | 1 | 341 | 1 | 360 | 1.91e-21 | 95.1 |
| Msa0578320 | AT5G45910.1 | 29.333 | 375 | 205 | 20 | 7 | 340 | 3 | 358 | 2.24e-21 | 94.7 |
| Msa0578320 | AT3G14210.1 | 26.957 | 345 | 209 | 14 | 33 | 360 | 38 | 356 | 4.28e-21 | 94.0 |
| Msa0578320 | AT1G28670.1 | 26.935 | 323 | 205 | 13 | 35 | 334 | 39 | 353 | 6.19e-21 | 93.6 |
| Msa0578320 | AT2G27360.1 | 25.904 | 332 | 211 | 14 | 35 | 341 | 37 | 358 | 7.39e-21 | 93.2 |
| Msa0578320 | AT1G28610.2 | 25.549 | 364 | 236 | 14 | 1 | 340 | 1 | 353 | 9.74e-21 | 92.8 |
| Msa0578320 | AT3G26430.1 | 27.224 | 371 | 216 | 15 | 12 | 342 | 5 | 361 | 1.49e-20 | 92.4 |
| Msa0578320 | AT1G28660.2 | 27.596 | 337 | 197 | 15 | 35 | 341 | 39 | 358 | 1.82e-20 | 92.0 |
| Msa0578320 | AT1G54790.2 | 24.250 | 400 | 232 | 13 | 7 | 347 | 3 | 390 | 6.68e-20 | 90.9 |
| Msa0578320 | AT3G09930.2 | 25.392 | 319 | 200 | 13 | 33 | 335 | 41 | 337 | 4.83e-18 | 84.7 |
| Msa0578320 | AT3G09930.1 | 25.392 | 319 | 200 | 13 | 33 | 335 | 41 | 337 | 4.83e-18 | 84.7 |
| Msa0578320 | AT4G01130.2 | 24.832 | 298 | 197 | 10 | 10 | 290 | 11 | 298 | 1.38e-17 | 83.2 |
| Msa0578320 | AT1G56670.2 | 24.407 | 295 | 199 | 7 | 7 | 290 | 16 | 297 | 1.95e-17 | 82.0 |
| Msa0578320 | AT1G54020.1 | 23.860 | 285 | 184 | 9 | 84 | 360 | 1 | 260 | 1.96e-16 | 79.3 |
| Msa0578320 | AT1G54020.5 | 23.860 | 285 | 184 | 9 | 84 | 360 | 1 | 260 | 1.96e-16 | 79.3 |
| Msa0578320 | AT1G54020.3 | 23.860 | 285 | 184 | 9 | 84 | 360 | 1 | 260 | 1.96e-16 | 79.3 |
| Msa0578320 | AT5G03600.1 | 24.611 | 321 | 201 | 13 | 28 | 335 | 11 | 303 | 8.68e-16 | 77.8 |
| Msa0578320 | AT5G03600.2 | 24.611 | 321 | 201 | 13 | 28 | 335 | 46 | 338 | 1.21e-15 | 77.8 |
| Msa0578320 | AT1G54030.2 | 27.426 | 237 | 146 | 8 | 33 | 265 | 54 | 268 | 1.42e-15 | 77.0 |
| Msa0578320 | AT1G54020.4 | 25.592 | 211 | 144 | 5 | 155 | 360 | 9 | 211 | 8.06e-15 | 73.6 |
| Msa0578320 | AT3G62280.2 | 25.092 | 271 | 183 | 9 | 28 | 290 | 33 | 291 | 1.31e-14 | 73.9 |
| Msa0578320 | AT4G01130.3 | 24.365 | 197 | 125 | 5 | 158 | 336 | 81 | 271 | 5.20e-14 | 72.4 |
| Msa0578320 | AT1G28600.2 | 28.889 | 180 | 114 | 6 | 1 | 170 | 1 | 176 | 1.35e-12 | 67.0 |
| Msa0578320 | AT2G36325.1 | 23.457 | 324 | 197 | 14 | 33 | 335 | 49 | 342 | 2.24e-11 | 65.1 |
Find 91 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTTGCTGTTAAATATT+TGG | 0.128573 | 4_1:-82872347 | None:intergenic |
| TTGGAATGTGTTATTTCTTT+TGG | 0.168591 | 4_1:+82872859 | Msa0578320:three_prime_UTR |
| GTTCCTTGTTACTTCATATT+TGG | 0.188601 | 4_1:+82870363 | Msa0578320:CDS |
| CTTCATATTTGGTGATTCTT+TGG | 0.189419 | 4_1:+82870374 | Msa0578320:CDS |
| GCAAGGAAAATGGTACTATT+TGG | 0.193855 | 4_1:+82872237 | Msa0578320:CDS |
| CTCCTTGTAGCCAATTCATT+TGG | 0.231307 | 4_1:-82872282 | None:intergenic |
| CTATTTGGGATTGGTCAAAT+AGG | 0.261478 | 4_1:+82872252 | Msa0578320:CDS |
| CAACAATGGTCTTCAATCTT+TGG | 0.266111 | 4_1:+82870410 | Msa0578320:CDS |
| GTTATCTATGTAAATTCTTA+TGG | 0.274377 | 4_1:+82872414 | Msa0578320:CDS |
| CTTAGAACTCTTTATAATAA+TGG | 0.282837 | 4_1:+82872213 | Msa0578320:CDS |
| ATAAGCAACCCTTCAGCTTA+TGG | 0.283201 | 4_1:+82872453 | Msa0578320:CDS |
| ACTACCATAGTTAATGTTCT+TGG | 0.287184 | 4_1:+82872840 | Msa0578320:three_prime_UTR |
| CATAAACATGTTTGCATTGT+TGG | 0.293332 | 4_1:+82870296 | Msa0578320:CDS |
| ACAGAAGAGAGTATTTGTTT+TGG | 0.298948 | 4_1:+82872662 | Msa0578320:CDS |
| GGCTAGAAGGGTAGATAGAT+AGG | 0.300404 | 4_1:-82870230 | None:intergenic |
| AGAGCTGATTACTTTCCTTA+TGG | 0.305355 | 4_1:+82870435 | Msa0578320:CDS |
| TCCTTGTAGCCAATTCATTT+GGG | 0.310519 | 4_1:-82872281 | None:intergenic |
| AGCAAGTGTATTTACTCAAT+TGG | 0.316742 | 4_1:+82872075 | Msa0578320:CDS |
| ATAATTGACTCCTTTGAGTA+TGG | 0.322702 | 4_1:-82871822 | None:intergenic |
| CAAGGAAAATGGTACTATTT+GGG | 0.330075 | 4_1:+82872238 | Msa0578320:CDS |
| TAATAATGGAGCAAGGAAAA+TGG | 0.350040 | 4_1:+82872227 | Msa0578320:CDS |
| TCCACACATGTTACGCCATC+CGG | 0.350778 | 4_1:-82872306 | None:intergenic |
| TTGTGCTTGGTTTGTTGAGT+GGG | 0.361594 | 4_1:+82870322 | Msa0578320:CDS |
| GGTGGTGAAGAGTGGCTAGA+AGG | 0.364704 | 4_1:-82870243 | None:intergenic |
| GGTGATTCTTTGGTGGATAA+TGG | 0.370098 | 4_1:+82870384 | Msa0578320:CDS |
| CCTTATGGAATTGACTTTGG+TGG | 0.378784 | 4_1:+82870450 | Msa0578320:CDS |
| AATTTAACAGCTGAGCTATT+GGG | 0.380127 | 4_1:+82871755 | Msa0578320:intron |
| CTTGGTTTGTTGAGTGGGGT+TGG | 0.398393 | 4_1:+82870327 | Msa0578320:CDS |
| TTTCCTTATGGAATTGACTT+TGG | 0.406222 | 4_1:+82870447 | Msa0578320:CDS |
| GCACTTGGGCACTAAAACTA+AGG | 0.408185 | 4_1:-82871981 | None:intergenic |
| AAATTTAACAGCTGAGCTAT+TGG | 0.411633 | 4_1:+82871754 | Msa0578320:intron |
| ATTGACTTTGGTGGACCTAC+TGG | 0.426568 | 4_1:+82870459 | Msa0578320:CDS |
| GTGTATTTACTCAATTGGAT+TGG | 0.426674 | 4_1:+82872080 | Msa0578320:CDS |
| TATTTGGGATTGGTCAAATA+GGG | 0.426710 | 4_1:+82872253 | Msa0578320:CDS |
| GCTAAGTGGCTAATATCAAT+AGG | 0.428046 | 4_1:-82872766 | None:intergenic |
| GCATTGTTGGTTGTTGTGCT+TGG | 0.430718 | 4_1:+82870309 | Msa0578320:CDS |
| TGCTTTGGTAATTCTGCACT+TGG | 0.435688 | 4_1:-82871996 | None:intergenic |
| TGTATTTACTCAATTGGATT+GGG | 0.440503 | 4_1:+82872081 | Msa0578320:CDS |
| AGGGTGCAGCCCAAATGAAT+TGG | 0.441847 | 4_1:+82872272 | Msa0578320:CDS |
| CTACTTGTGACACAGTGCTT+TGG | 0.442326 | 4_1:-82872011 | None:intergenic |
| AAGAGTGTAAATATATATAG+TGG | 0.457369 | 4_1:-82870170 | None:intergenic |
| CATTCCAAGAACATTAACTA+TGG | 0.459879 | 4_1:-82872844 | None:intergenic |
| AATTATGCTTCTGCAGCAGC+TGG | 0.464686 | 4_1:+82871839 | Msa0578320:CDS |
| CATATTTGGTGATTCTTTGG+TGG | 0.471586 | 4_1:+82870377 | Msa0578320:CDS |
| GTGGTGAAGAGTGGCTAGAA+GGG | 0.475155 | 4_1:-82870242 | None:intergenic |
| AAAACCACTGTTGATGCAAT+TGG | 0.478051 | 4_1:+82870498 | Msa0578320:CDS |
| AGATCATCAGCATACTCATC+TGG | 0.478200 | 4_1:-82872168 | None:intergenic |
| GCTGGAATTAGAGAGGAAAC+TGG | 0.486290 | 4_1:+82871857 | Msa0578320:CDS |
| GCTAGAAGGGTAGATAGATA+GGG | 0.489285 | 4_1:-82870229 | None:intergenic |
| AAAATGGTACTATTTGGGAT+TGG | 0.509987 | 4_1:+82872243 | Msa0578320:CDS |
| CCACCAAAGTCAATTCCATA+AGG | 0.510808 | 4_1:-82870450 | None:intergenic |
| TCAATAGGATAAGCATCCTC+TGG | 0.512358 | 4_1:-82872751 | None:intergenic |
| ATGCCTCAATTCTATAGCAC+AGG | 0.522685 | 4_1:+82872132 | Msa0578320:CDS |
| GCCCAAATGAATTGGCTACA+AGG | 0.526085 | 4_1:+82872280 | Msa0578320:CDS |
| ATTAAATTACCATAAGCTGA+AGG | 0.527446 | 4_1:-82872462 | None:intergenic |
| ATGAAGTAACAAGGAACTTG+TGG | 0.528070 | 4_1:-82870357 | None:intergenic |
| GTTGTGCTTGGTTTGTTGAG+TGG | 0.531237 | 4_1:+82870321 | Msa0578320:CDS |
| TTCTCACATGGTGTTTGCAA+TGG | 0.539683 | 4_1:-82872640 | None:intergenic |
| TCACAAGTAGTGAATATACT+AGG | 0.545333 | 4_1:+82872024 | Msa0578320:CDS |
| ACTACATTTCCAGCTTCAGT+TGG | 0.550316 | 4_1:-82872697 | None:intergenic |
| TGAATTGGCTACAAGGAGCC+CGG | 0.555961 | 4_1:+82872287 | Msa0578320:CDS |
| TTAAATTACCATAAGCTGAA+GGG | 0.562936 | 4_1:-82872461 | None:intergenic |
| TGTGCTTGGTTTGTTGAGTG+GGG | 0.564540 | 4_1:+82870323 | Msa0578320:CDS |
| CCACACATGTTACGCCATCC+GGG | 0.567099 | 4_1:-82872305 | None:intergenic |
| ATCATCACTAGCAGATGCAT+AGG | 0.567991 | 4_1:-82871798 | None:intergenic |
| GCTTTGGTAATTCTGCACTT+GGG | 0.580136 | 4_1:-82871995 | None:intergenic |
| CCCGGATGGCGTAACATGTG+TGG | 0.590019 | 4_1:+82872305 | Msa0578320:CDS |
| AGTGATGATGCCATACTCAA+AGG | 0.595556 | 4_1:+82871812 | Msa0578320:CDS |
| AATGCTGGATGCTGTGGAGT+AGG | 0.598356 | 4_1:+82872589 | Msa0578320:CDS |
| GTTACAAATGCTGGATGCTG+TGG | 0.599550 | 4_1:+82872583 | Msa0578320:CDS |
| TAGATCAGAGCTGAGCTAAG+TGG | 0.600707 | 4_1:-82872780 | None:intergenic |
| CCATTGGAAAACCTTCCAGT+AGG | 0.600738 | 4_1:-82870474 | None:intergenic |
| TATCAGCATGGTCTTGCTAG+TGG | 0.602418 | 4_1:+82872801 | Msa0578320:three_prime_UTR |
| TTGGCTACAAGGAGCCCGGA+TGG | 0.604127 | 4_1:+82872291 | Msa0578320:CDS |
| GTGGATAATGGTAACAACAA+TGG | 0.606722 | 4_1:+82870396 | Msa0578320:CDS |
| ACTTTGGTGGACCTACTGGA+AGG | 0.612651 | 4_1:+82870463 | Msa0578320:CDS |
| TACTCTCTTCTGTTCTCACA+TGG | 0.612707 | 4_1:-82872652 | None:intergenic |
| ATATTTAACAGCAAATTGAA+AGG | 0.613518 | 4_1:+82872351 | Msa0578320:CDS |
| TCATCACTAGCAGATGCATA+GGG | 0.614085 | 4_1:-82871797 | None:intergenic |
| CTCTTTATAATAATGGAGCA+AGG | 0.616381 | 4_1:+82872220 | Msa0578320:CDS |
| TGCAGCAGCTGGAATTAGAG+AGG | 0.635095 | 4_1:+82871850 | Msa0578320:CDS |
| CTGGATGCTGTGGAGTAGGA+AGG | 0.636608 | 4_1:+82872593 | Msa0578320:CDS |
| CTTACCAATTGCATCAACAG+TGG | 0.640720 | 4_1:-82870502 | None:intergenic |
| GTGCCTGTGCTATAGAATTG+AGG | 0.644555 | 4_1:-82872135 | None:intergenic |
| TCACTAGCAGATGCATAGGG+TGG | 0.661781 | 4_1:-82871794 | None:intergenic |
| TTACAGTGCTCAATCTCCAG+AGG | 0.662313 | 4_1:+82872735 | Msa0578320:CDS |
| AGTGAATATACTAGGAACTG+AGG | 0.666217 | 4_1:+82872032 | Msa0578320:CDS |
| TCACCAAATATGAAGTAACA+AGG | 0.672914 | 4_1:-82870366 | None:intergenic |
| TCAGCTCTGATCTATCAGCA+TGG | 0.682994 | 4_1:+82872789 | Msa0578320:exon |
| GAATTAGAGAGGAAACTGGA+CGG | 0.701371 | 4_1:+82871861 | Msa0578320:CDS |
| TGTGGAGTAGGAAGGAACAA+TGG | 0.715337 | 4_1:+82872601 | Msa0578320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTTTATAAAAAATTG+GGG | - | chr4_1:82871316-82871335 | None:intergenic | 10.0% |
| !!! | TTGATTTTTTTTTTTTTTTG+AGG | + | chr4_1:82871654-82871673 | Msa0578320:intron | 10.0% |
| !!! | TTAAATTTGTTATATTTCAC+TGG | + | chr4_1:82870735-82870754 | Msa0578320:intron | 15.0% |
| !!! | ATGAAATTCAAATCTTTTTT+AGG | + | chr4_1:82870941-82870960 | Msa0578320:intron | 15.0% |
| !! | ATATTATGATTTCACTATTA+AGG | - | chr4_1:82871359-82871378 | None:intergenic | 15.0% |
| !!! | AATATGTTCTAAATATTTGT+AGG | + | chr4_1:82871951-82871970 | Msa0578320:intron | 15.0% |
| !!! | ATATGTTCTAAATATTTGTA+GGG | + | chr4_1:82871952-82871971 | Msa0578320:intron | 15.0% |
| !! | AATTAAATTTGATGTCAATA+AGG | - | chr4_1:82872550-82872569 | None:intergenic | 15.0% |
| !!! | AAGAGTGTAAATATATATAG+TGG | - | chr4_1:82870173-82870192 | None:intergenic | 20.0% |
| !! | GAAAATAAAAGAAAAGCAAA+GGG | - | chr4_1:82870529-82870548 | None:intergenic | 20.0% |
| !! | AGAAAATAAAAGAAAAGCAA+AGG | - | chr4_1:82870530-82870549 | None:intergenic | 20.0% |
| !!! | AATTCAAATCTTTTTTAGGA+TGG | + | chr4_1:82870945-82870964 | Msa0578320:intron | 20.0% |
| !! | AATGGTCAAAATTATAGAAA+TGG | - | chr4_1:82871108-82871127 | None:intergenic | 20.0% |
| !! | TTATAAAAAATTGGGGAATT+GGG | - | chr4_1:82871309-82871328 | None:intergenic | 20.0% |
| !! | TTTATAAAAAATTGGGGAAT+TGG | - | chr4_1:82871310-82871329 | None:intergenic | 20.0% |
| !!! | ATTTAATACAGTTTTGACAA+AGG | + | chr4_1:82871515-82871534 | Msa0578320:intron | 20.0% |
| !! | CTTAGAACTCTTTATAATAA+TGG | + | chr4_1:82872213-82872232 | Msa0578320:CDS | 20.0% |
| !!! | TCAATTTGCTGTTAAATATT+TGG | - | chr4_1:82872350-82872369 | None:intergenic | 20.0% |
| !! | ATATTTAACAGCAAATTGAA+AGG | + | chr4_1:82872351-82872370 | Msa0578320:CDS | 20.0% |
| !! | GTTATCTATGTAAATTCTTA+TGG | + | chr4_1:82872414-82872433 | Msa0578320:CDS | 20.0% |
| !!! | TGACATCAAATTTAATTTTC+AGG | + | chr4_1:82872553-82872572 | Msa0578320:intron | 20.0% |
| !! | TTATCTAACCGTCTAAAATT+TGG | + | chr4_1:82870649-82870668 | Msa0578320:intron | 25.0% |
| !! | TATCTAACCGTCTAAAATTT+GGG | + | chr4_1:82870650-82870669 | Msa0578320:intron | 25.0% |
| !! | AACAAAACCCAAATTTTAGA+CGG | - | chr4_1:82870660-82870679 | None:intergenic | 25.0% |
| !!! | GGTTTTGTTGATAATTAAGT+TGG | + | chr4_1:82870671-82870690 | Msa0578320:intron | 25.0% |
| !! | TAAGTTGGCATAAATTATAC+TGG | + | chr4_1:82870686-82870705 | Msa0578320:intron | 25.0% |
| ! | TTCTAGGTAGTTAAAATAAC+TGG | - | chr4_1:82870865-82870884 | None:intergenic | 25.0% |
| ! | CCTATTACTATCAATTAAAG+TGG | - | chr4_1:82871005-82871024 | None:intergenic | 25.0% |
| !! | CCACTTTAATTGATAGTAAT+AGG | + | chr4_1:82871002-82871021 | Msa0578320:intron | 25.0% |
| ! | TTGAAGATTTGGCTAAAATA+GGG | - | chr4_1:82871047-82871066 | None:intergenic | 25.0% |
| ! | ATTGAAGATTTGGCTAAAAT+AGG | - | chr4_1:82871048-82871067 | None:intergenic | 25.0% |
| !! | TTTAGCCAAATCTTCAATTT+TGG | + | chr4_1:82871050-82871069 | Msa0578320:intron | 25.0% |
| ! | TAGATCAAAATGATGTCTTA+TGG | + | chr4_1:82871151-82871170 | Msa0578320:intron | 25.0% |
| ! | AGATCAAAATGATGTCTTAT+GGG | + | chr4_1:82871152-82871171 | Msa0578320:intron | 25.0% |
| !!! | ATTTTGACTAAATGGCAATT+TGG | - | chr4_1:82871251-82871270 | None:intergenic | 25.0% |
| !! | AATTGCCATTTAGTCAAAAT+AGG | + | chr4_1:82871251-82871270 | Msa0578320:intron | 25.0% |
| !! | ATTGCCATTTAGTCAAAATA+GGG | + | chr4_1:82871252-82871271 | Msa0578320:intron | 25.0% |
| !!! | ATAAGGCTTTACTAGTTTTT+TGG | - | chr4_1:82871279-82871298 | None:intergenic | 25.0% |
| ! | AAACAAACACAAGATTTAAG+TGG | + | chr4_1:82871610-82871629 | Msa0578320:intron | 25.0% |
| ! | AACAAACACAAGATTTAAGT+GGG | + | chr4_1:82871611-82871630 | Msa0578320:intron | 25.0% |
| ! | TGTATTTACTCAATTGGATT+GGG | + | chr4_1:82872081-82872100 | Msa0578320:CDS | 25.0% |
| !! | ACATAGATAACTTTTGAATC+TGG | - | chr4_1:82872405-82872424 | None:intergenic | 25.0% |
| ! | TTAAATTACCATAAGCTGAA+GGG | - | chr4_1:82872464-82872483 | None:intergenic | 25.0% |
| ! | ATTAAATTACCATAAGCTGA+AGG | - | chr4_1:82872465-82872484 | None:intergenic | 25.0% |
| ! | ATGTGACTAGAAAAATGTTT+AGG | - | chr4_1:82872494-82872513 | None:intergenic | 25.0% |
| !!! | TTGGAATGTGTTATTTCTTT+TGG | + | chr4_1:82872859-82872878 | Msa0578320:three_prime_UTR | 25.0% |
| AATGCCATTGAAGCAAAAAT+TGG | - | chr4_1:82870267-82870286 | None:intergenic | 30.0% | |
| CATAAACATGTTTGCATTGT+TGG | + | chr4_1:82870296-82870315 | Msa0578320:CDS | 30.0% | |
| ! | GTTCCTTGTTACTTCATATT+TGG | + | chr4_1:82870363-82870382 | Msa0578320:CDS | 30.0% |
| TCACCAAATATGAAGTAACA+AGG | - | chr4_1:82870369-82870388 | None:intergenic | 30.0% | |
| ! | CTTCATATTTGGTGATTCTT+TGG | + | chr4_1:82870374-82870393 | Msa0578320:CDS | 30.0% |
| ! | TTTCCTTATGGAATTGACTT+TGG | + | chr4_1:82870447-82870466 | Msa0578320:CDS | 30.0% |
| GCATGCACTTGTATATTATA+TGG | + | chr4_1:82870564-82870583 | Msa0578320:intron | 30.0% | |
| CATAAATTATACTGGTAGAG+TGG | + | chr4_1:82870694-82870713 | Msa0578320:intron | 30.0% | |
| AGGTAGTTAAAATAACTGGA+GGG | - | chr4_1:82870861-82870880 | None:intergenic | 30.0% | |
| TAGGTAGTTAAAATAACTGG+AGG | - | chr4_1:82870862-82870881 | None:intergenic | 30.0% | |
| ATTTCATGGATCATGTTTCT+AGG | - | chr4_1:82870881-82870900 | None:intergenic | 30.0% | |
| AAGCGTTTGAATTTGTAACA+GGG | + | chr4_1:82870918-82870937 | Msa0578320:intron | 30.0% | |
| !!! | TCAAATCTTTTTTAGGATGG+TGG | + | chr4_1:82870948-82870967 | Msa0578320:intron | 30.0% |
| ATTGCCAATTAGAAATAGAG+TGG | - | chr4_1:82871076-82871095 | None:intergenic | 30.0% | |
| TTGTCACATCATCAATTGAA+TGG | - | chr4_1:82871126-82871145 | None:intergenic | 30.0% | |
| GATCAAAATGATGTCTTATG+GGG | + | chr4_1:82871153-82871172 | Msa0578320:intron | 30.0% | |
| GGGAATTGGGAAATATTATA+AGG | - | chr4_1:82871296-82871315 | None:intergenic | 30.0% | |
| ! | ATCAGTACTTCTGGTAATTT+TGG | - | chr4_1:82871581-82871600 | None:intergenic | 30.0% |
| !! | AATTACCAGAAGTACTGATT+CGG | + | chr4_1:82871582-82871601 | Msa0578320:intron | 30.0% |
| AAATTTAACAGCTGAGCTAT+TGG | + | chr4_1:82871754-82871773 | Msa0578320:intron | 30.0% | |
| AATTTAACAGCTGAGCTATT+GGG | + | chr4_1:82871755-82871774 | Msa0578320:intron | 30.0% | |
| ! | ATAATTGACTCCTTTGAGTA+TGG | - | chr4_1:82871825-82871844 | None:intergenic | 30.0% |
| TCACAAGTAGTGAATATACT+AGG | + | chr4_1:82872024-82872043 | Msa0578320:CDS | 30.0% | |
| AGCAAGTGTATTTACTCAAT+TGG | + | chr4_1:82872075-82872094 | Msa0578320:CDS | 30.0% | |
| GTGTATTTACTCAATTGGAT+TGG | + | chr4_1:82872080-82872099 | Msa0578320:CDS | 30.0% | |
| ! | CTCTTTATAATAATGGAGCA+AGG | + | chr4_1:82872220-82872239 | Msa0578320:CDS | 30.0% |
| ! | TAATAATGGAGCAAGGAAAA+TGG | + | chr4_1:82872227-82872246 | Msa0578320:CDS | 30.0% |
| CAAGGAAAATGGTACTATTT+GGG | + | chr4_1:82872238-82872257 | Msa0578320:CDS | 30.0% | |
| ! | AAAATGGTACTATTTGGGAT+TGG | + | chr4_1:82872243-82872262 | Msa0578320:CDS | 30.0% |
| !! | TATTTGGGATTGGTCAAATA+GGG | + | chr4_1:82872253-82872272 | Msa0578320:CDS | 30.0% |
| !!! | ACAGAAGAGAGTATTTGTTT+TGG | + | chr4_1:82872662-82872681 | Msa0578320:CDS | 30.0% |
| !!! | CAGAAGAGAGTATTTGTTTT+GGG | + | chr4_1:82872663-82872682 | Msa0578320:CDS | 30.0% |
| ACTACCATAGTTAATGTTCT+TGG | + | chr4_1:82872840-82872859 | Msa0578320:three_prime_UTR | 30.0% | |
| CATTCCAAGAACATTAACTA+TGG | - | chr4_1:82872847-82872866 | None:intergenic | 30.0% | |
| ! | ACCACCAATTTTTGCTTCAA+TGG | + | chr4_1:82870260-82870279 | Msa0578320:exon | 35.0% |
| ! | TTTTGCTTCAATGGCATTTG+AGG | + | chr4_1:82870269-82870288 | Msa0578320:exon | 35.0% |
| ATGAAGTAACAAGGAACTTG+TGG | - | chr4_1:82870360-82870379 | None:intergenic | 35.0% | |
| ! | CATATTTGGTGATTCTTTGG+TGG | + | chr4_1:82870377-82870396 | Msa0578320:CDS | 35.0% |
| ! | GTGGATAATGGTAACAACAA+TGG | + | chr4_1:82870396-82870415 | Msa0578320:CDS | 35.0% |
| CAACAATGGTCTTCAATCTT+TGG | + | chr4_1:82870410-82870429 | Msa0578320:CDS | 35.0% | |
| AGAGCTGATTACTTTCCTTA+TGG | + | chr4_1:82870435-82870454 | Msa0578320:CDS | 35.0% | |
| ! | ATCAACAGTGGTTTTTCCAT+TGG | - | chr4_1:82870493-82870512 | None:intergenic | 35.0% |
| AAAACCACTGTTGATGCAAT+TGG | + | chr4_1:82870498-82870517 | Msa0578320:CDS | 35.0% | |
| ! | ACAAATTCAAACGCTTGCTA+TGG | - | chr4_1:82870914-82870933 | None:intergenic | 35.0% |
| CAAGCGTTTGAATTTGTAAC+AGG | + | chr4_1:82870917-82870936 | Msa0578320:intron | 35.0% | |
| AGTGGCCAAAATTGAAGATT+TGG | - | chr4_1:82871058-82871077 | None:intergenic | 35.0% | |
| !! | TTGGCCACTCTATTTCTAAT+TGG | + | chr4_1:82871069-82871088 | Msa0578320:intron | 35.0% |
| !!! | TGGTCCCTATTTTGACTAAA+TGG | - | chr4_1:82871259-82871278 | None:intergenic | 35.0% |
| AACAAAAACACCTAGAAGCA+TGG | + | chr4_1:82871332-82871351 | Msa0578320:intron | 35.0% | |
| ! | ATGGAATGGAATTTAAAGCC+CGG | - | chr4_1:82871456-82871475 | None:intergenic | 35.0% |
| ! | CTGGTAATTTTGGATCTCTT+TGG | - | chr4_1:82871571-82871590 | None:intergenic | 35.0% |
| ! | TTTTACCGAATCAGTACTTC+TGG | - | chr4_1:82871590-82871609 | None:intergenic | 35.0% |
| TACTGTTGTCTAACTAACTG+TGG | + | chr4_1:82871731-82871750 | Msa0578320:intron | 35.0% | |
| AGTGAATATACTAGGAACTG+AGG | + | chr4_1:82872032-82872051 | Msa0578320:CDS | 35.0% | |
| GCAAGGAAAATGGTACTATT+TGG | + | chr4_1:82872237-82872256 | Msa0578320:CDS | 35.0% | |
| !! | CTATTTGGGATTGGTCAAAT+AGG | + | chr4_1:82872252-82872271 | Msa0578320:CDS | 35.0% |
| TCCTTGTAGCCAATTCATTT+GGG | - | chr4_1:82872284-82872303 | None:intergenic | 35.0% | |
| ! | TAACTTTTGAATCTGGAAGC+TGG | - | chr4_1:82872398-82872417 | None:intergenic | 35.0% |
| !! | GGTTTTAGTGTTACAAATGC+TGG | + | chr4_1:82872574-82872593 | Msa0578320:intron | 35.0% |
| GCTAAGTGGCTAATATCAAT+AGG | - | chr4_1:82872769-82872788 | None:intergenic | 35.0% | |
| GCTAGAAGGGTAGATAGATA+GGG | - | chr4_1:82870232-82870251 | None:intergenic | 40.0% | |
| !! | CAAAAATTGGTGGTGAAGAG+TGG | - | chr4_1:82870254-82870273 | None:intergenic | 40.0% |
| GCCATTGAAGCAAAAATTGG+TGG | - | chr4_1:82870264-82870283 | None:intergenic | 40.0% | |
| !! | TTGTGCTTGGTTTGTTGAGT+GGG | + | chr4_1:82870322-82870341 | Msa0578320:CDS | 40.0% |
| ! | GGTGATTCTTTGGTGGATAA+TGG | + | chr4_1:82870384-82870403 | Msa0578320:CDS | 40.0% |
| CCACCAAAGTCAATTCCATA+AGG | - | chr4_1:82870453-82870472 | None:intergenic | 40.0% | |
| ! | CCTTATGGAATTGACTTTGG+TGG | + | chr4_1:82870450-82870469 | Msa0578320:CDS | 40.0% |
| CTTACCAATTGCATCAACAG+TGG | - | chr4_1:82870505-82870524 | None:intergenic | 40.0% | |
| CTATTAAGGACCATGCTTCT+AGG | - | chr4_1:82871345-82871364 | None:intergenic | 40.0% | |
| ! | GTAGTAGAGTACTAGCATCA+TGG | - | chr4_1:82871406-82871425 | None:intergenic | 40.0% |
| CAAGATTCACACTCATCAAG+AGG | - | chr4_1:82871430-82871449 | None:intergenic | 40.0% | |
| ATGAGTGTGAATCTTGTGAC+CGG | + | chr4_1:82871434-82871453 | Msa0578320:intron | 40.0% | |
| TCCATTCCATTCCATTCACA+TGG | + | chr4_1:82871466-82871485 | Msa0578320:intron | 40.0% | |
| ACCATGTGAATGGAATGGAA+TGG | - | chr4_1:82871470-82871489 | None:intergenic | 40.0% | |
| ACAGAACCATGTGAATGGAA+TGG | - | chr4_1:82871475-82871494 | None:intergenic | 40.0% | |
| ! | TCCATTCACATGGTTCTGTT+TGG | + | chr4_1:82871476-82871495 | Msa0578320:intron | 40.0% |
| ACCAAACAGAACCATGTGAA+TGG | - | chr4_1:82871480-82871499 | None:intergenic | 40.0% | |
| TCATCACTAGCAGATGCATA+GGG | - | chr4_1:82871800-82871819 | None:intergenic | 40.0% | |
| ATCATCACTAGCAGATGCAT+AGG | - | chr4_1:82871801-82871820 | None:intergenic | 40.0% | |
| ! | AGTGATGATGCCATACTCAA+AGG | + | chr4_1:82871812-82871831 | Msa0578320:CDS | 40.0% |
| GAATTAGAGAGGAAACTGGA+CGG | + | chr4_1:82871861-82871880 | Msa0578320:CDS | 40.0% | |
| ! | GCTTTGGTAATTCTGCACTT+GGG | - | chr4_1:82871998-82872017 | None:intergenic | 40.0% |
| ! | TGCTTTGGTAATTCTGCACT+TGG | - | chr4_1:82871999-82872018 | None:intergenic | 40.0% |
| ATGCCTCAATTCTATAGCAC+AGG | + | chr4_1:82872132-82872151 | Msa0578320:CDS | 40.0% | |
| AGATCATCAGCATACTCATC+TGG | - | chr4_1:82872171-82872190 | None:intergenic | 40.0% | |
| CTCCTTGTAGCCAATTCATT+TGG | - | chr4_1:82872285-82872304 | None:intergenic | 40.0% | |
| ATAAGCAACCCTTCAGCTTA+TGG | + | chr4_1:82872453-82872472 | Msa0578320:CDS | 40.0% | |
| TTCTCACATGGTGTTTGCAA+TGG | - | chr4_1:82872643-82872662 | None:intergenic | 40.0% | |
| TACTCTCTTCTGTTCTCACA+TGG | - | chr4_1:82872655-82872674 | None:intergenic | 40.0% | |
| ACTACATTTCCAGCTTCAGT+TGG | - | chr4_1:82872700-82872719 | None:intergenic | 40.0% | |
| TCAATAGGATAAGCATCCTC+TGG | - | chr4_1:82872754-82872773 | None:intergenic | 40.0% | |
| GGCTAGAAGGGTAGATAGAT+AGG | - | chr4_1:82870233-82870252 | None:intergenic | 45.0% | |
| ! | GCATTGTTGGTTGTTGTGCT+TGG | + | chr4_1:82870309-82870328 | Msa0578320:CDS | 45.0% |
| !! | GTTGTGCTTGGTTTGTTGAG+TGG | + | chr4_1:82870321-82870340 | Msa0578320:CDS | 45.0% |
| !! | TGTGCTTGGTTTGTTGAGTG+GGG | + | chr4_1:82870323-82870342 | Msa0578320:CDS | 45.0% |
| ! | ATTGACTTTGGTGGACCTAC+TGG | + | chr4_1:82870459-82870478 | Msa0578320:CDS | 45.0% |
| CCATTGGAAAACCTTCCAGT+AGG | - | chr4_1:82870477-82870496 | None:intergenic | 45.0% | |
| ! | CCTACTGGAAGGTTTTCCAA+TGG | + | chr4_1:82870474-82870493 | Msa0578320:CDS | 45.0% |
| ATGGAGCTGCTGACATTTCA+TGG | - | chr4_1:82870895-82870914 | None:intergenic | 45.0% | |
| TGAGTGTGAATCTTGTGACC+GGG | + | chr4_1:82871435-82871454 | Msa0578320:intron | 45.0% | |
| AATTATGCTTCTGCAGCAGC+TGG | + | chr4_1:82871839-82871858 | Msa0578320:CDS | 45.0% | |
| GCTGGAATTAGAGAGGAAAC+TGG | + | chr4_1:82871857-82871876 | Msa0578320:CDS | 45.0% | |
| GCACTTGGGCACTAAAACTA+AGG | - | chr4_1:82871984-82872003 | None:intergenic | 45.0% | |
| CTACTTGTGACACAGTGCTT+TGG | - | chr4_1:82872014-82872033 | None:intergenic | 45.0% | |
| GTGCCTGTGCTATAGAATTG+AGG | - | chr4_1:82872138-82872157 | None:intergenic | 45.0% | |
| GCCCAAATGAATTGGCTACA+AGG | + | chr4_1:82872280-82872299 | Msa0578320:CDS | 45.0% | |
| GTTACAAATGCTGGATGCTG+TGG | + | chr4_1:82872583-82872602 | Msa0578320:CDS | 45.0% | |
| TGTGGAGTAGGAAGGAACAA+TGG | + | chr4_1:82872601-82872620 | Msa0578320:CDS | 45.0% | |
| ! | GCTTTTCATCCAACTGAAGC+TGG | + | chr4_1:82872688-82872707 | Msa0578320:CDS | 45.0% |
| TTACAGTGCTCAATCTCCAG+AGG | + | chr4_1:82872735-82872754 | Msa0578320:CDS | 45.0% | |
| TAGATCAGAGCTGAGCTAAG+TGG | - | chr4_1:82872783-82872802 | None:intergenic | 45.0% | |
| ! | TCAGCTCTGATCTATCAGCA+TGG | + | chr4_1:82872789-82872808 | Msa0578320:exon | 45.0% |
| ! | TATCAGCATGGTCTTGCTAG+TGG | + | chr4_1:82872801-82872820 | Msa0578320:three_prime_UTR | 45.0% |
| !!! | TTGTTTTTTTATAAAAAATT+GGG | - | chr4_1:82871317-82871336 | None:intergenic | 5.0% |
| !!! | TTTGTTTTTTTATAAAAAAT+TGG | - | chr4_1:82871318-82871337 | None:intergenic | 5.0% |
| GTGGTGAAGAGTGGCTAGAA+GGG | - | chr4_1:82870245-82870264 | None:intergenic | 50.0% | |
| !! | CTTGGTTTGTTGAGTGGGGT+TGG | + | chr4_1:82870327-82870346 | Msa0578320:CDS | 50.0% |
| ! | ACTTTGGTGGACCTACTGGA+AGG | + | chr4_1:82870463-82870482 | Msa0578320:CDS | 50.0% |
| TCACTAGCAGATGCATAGGG+TGG | - | chr4_1:82871797-82871816 | None:intergenic | 50.0% | |
| TGCAGCAGCTGGAATTAGAG+AGG | + | chr4_1:82871850-82871869 | Msa0578320:CDS | 50.0% | |
| AGGGTGCAGCCCAAATGAAT+TGG | + | chr4_1:82872272-82872291 | Msa0578320:CDS | 50.0% | |
| TGAATTGGCTACAAGGAGCC+CGG | + | chr4_1:82872287-82872306 | Msa0578320:CDS | 50.0% | |
| TCCACACATGTTACGCCATC+CGG | - | chr4_1:82872309-82872328 | None:intergenic | 50.0% | |
| AATGCTGGATGCTGTGGAGT+AGG | + | chr4_1:82872589-82872608 | Msa0578320:CDS | 50.0% | |
| GGTGGTGAAGAGTGGCTAGA+AGG | - | chr4_1:82870246-82870265 | None:intergenic | 55.0% | |
| CCACACATGTTACGCCATCC+GGG | - | chr4_1:82872308-82872327 | None:intergenic | 55.0% | |
| CTGGATGCTGTGGAGTAGGA+AGG | + | chr4_1:82872593-82872612 | Msa0578320:CDS | 55.0% | |
| TTGGCTACAAGGAGCCCGGA+TGG | + | chr4_1:82872291-82872310 | Msa0578320:CDS | 60.0% | |
| CCCGGATGGCGTAACATGTG+TGG | + | chr4_1:82872305-82872324 | Msa0578320:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 82870170 | 82873000 | 82870170 | ID=Msa0578320;Name=Msa0578320 |
| chr4_1 | mRNA | 82870170 | 82873000 | 82870170 | ID=Msa0578320-mRNA-1;Parent=Msa0578320;Name=Msa0578320-mRNA-1;_AED=0.08;_eAED=0.08;_QI=109|1|1|1|1|1|4|202|363 |
| chr4_1 | exon | 82870170 | 82870519 | 82870170 | ID=Msa0578320-mRNA-1:exon:30055;Parent=Msa0578320-mRNA-1 |
| chr4_1 | exon | 82871765 | 82871889 | 82871765 | ID=Msa0578320-mRNA-1:exon:30056;Parent=Msa0578320-mRNA-1 |
| chr4_1 | exon | 82871973 | 82872474 | 82871973 | ID=Msa0578320-mRNA-1:exon:30057;Parent=Msa0578320-mRNA-1 |
| chr4_1 | exon | 82872575 | 82873000 | 82872575 | ID=Msa0578320-mRNA-1:exon:30058;Parent=Msa0578320-mRNA-1 |
| chr4_1 | five_prime_UTR | 82870170 | 82870278 | 82870170 | ID=Msa0578320-mRNA-1:five_prime_utr;Parent=Msa0578320-mRNA-1 |
| chr4_1 | CDS | 82870279 | 82870519 | 82870279 | ID=Msa0578320-mRNA-1:cds;Parent=Msa0578320-mRNA-1 |
| chr4_1 | CDS | 82871765 | 82871889 | 82871765 | ID=Msa0578320-mRNA-1:cds;Parent=Msa0578320-mRNA-1 |
| chr4_1 | CDS | 82871973 | 82872474 | 82871973 | ID=Msa0578320-mRNA-1:cds;Parent=Msa0578320-mRNA-1 |
| chr4_1 | CDS | 82872575 | 82872798 | 82872575 | ID=Msa0578320-mRNA-1:cds;Parent=Msa0578320-mRNA-1 |
| chr4_1 | three_prime_UTR | 82872799 | 82873000 | 82872799 | ID=Msa0578320-mRNA-1:three_prime_utr;Parent=Msa0578320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
