Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618170 | XP_003629880.1 | 97.245 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 0.0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618170 | sp|Q9C7N4|GDL15_ARATH | 67.582 | 364 | 114 | 2 | 3 | 363 | 1 | 363 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0109950 | Msa0618170 | 0.804639 | 1.961019e-49 | -8.615850e-47 |
| Msa0618170 | Msa0641620 | 0.814352 | 1.609745e-51 | -8.615850e-47 |
| Msa0618170 | Msa0645930 | 0.820376 | 7.086197e-53 | -8.615850e-47 |
| Msa0618170 | Msa0669840 | 0.804017 | 2.642677e-49 | -8.615850e-47 |
| Msa0618170 | Msa0688500 | 0.814337 | 1.621678e-51 | -8.615850e-47 |
| Msa0618170 | Msa0701960 | 0.938863 | 3.327815e-99 | -8.615850e-47 |
| Msa0618170 | Msa0747780 | 0.804490 | 2.107382e-49 | -8.615850e-47 |
| Msa0618170 | Msa0761580 | 0.821168 | 4.660732e-53 | -8.615850e-47 |
| Msa0618170 | Msa0843290 | 0.807395 | 5.162406e-50 | -8.615850e-47 |
| Msa0618170 | Msa0849280 | 0.814313 | 1.641478e-51 | -8.615850e-47 |
| Msa0618170 | Msa0851020 | 0.802429 | 5.634508e-49 | -8.615850e-47 |
| Msa0618170 | Msa0867350 | 0.816776 | 4.645418e-52 | -8.615850e-47 |
| Msa0618170 | Msa0872310 | 0.838287 | 3.145636e-57 | -8.615850e-47 |
| Msa0618170 | Msa0873190 | 0.800278 | 1.553570e-48 | -8.615850e-47 |
| Msa0618170 | Msa0898730 | 0.811591 | 6.483416e-51 | -8.615850e-47 |
| Msa0618170 | Msa0905550 | 0.808204 | 3.474647e-50 | -8.615850e-47 |
| Msa0618170 | Msa0929870 | 0.805280 | 1.440901e-49 | -8.615850e-47 |
| Msa0618170 | Msa0936340 | 0.804587 | 2.011070e-49 | -8.615850e-47 |
| Msa0618170 | Msa0937550 | 0.805871 | 1.082672e-49 | -8.615850e-47 |
| Msa0618170 | Msa0951460 | 0.813470 | 2.518959e-51 | -8.615850e-47 |
| Msa0618170 | Msa0951960 | 0.801420 | 9.078592e-49 | -8.615850e-47 |
| Msa0618170 | Msa1007350 | 0.805927 | 1.053590e-49 | -8.615850e-47 |
| Msa0618170 | Msa1032450 | 0.815236 | 1.025059e-51 | -8.615850e-47 |
| Msa0618170 | Msa1037900 | 0.852187 | 5.442197e-61 | -8.615850e-47 |
| Msa0618170 | Msa1037910 | 0.830014 | 3.727031e-55 | -8.615850e-47 |
| Msa0618170 | Msa1037920 | 0.806263 | 8.955223e-50 | -8.615850e-47 |
| Msa0618170 | Msa1041530 | 0.849177 | 3.823239e-60 | -8.615850e-47 |
| Msa0618170 | Msa1042670 | 0.836916 | 7.066789e-57 | -8.615850e-47 |
| Msa0618170 | Msa1081570 | 0.839657 | 1.390266e-57 | -8.615850e-47 |
| Msa0618170 | Msa1123880 | 0.825226 | 5.262296e-54 | -8.615850e-47 |
| Msa0618170 | Msa1127140 | 0.846076 | 2.725418e-59 | -8.615850e-47 |
| Msa0618170 | Msa1129960 | 0.861928 | 7.265788e-64 | -8.615850e-47 |
| Msa0618170 | Msa1129970 | 0.829150 | 6.045076e-55 | -8.615850e-47 |
| Msa0618170 | Msa1130010 | 0.804017 | 2.642797e-49 | -8.615850e-47 |
| Msa0618170 | Msa1136230 | 0.810917 | 9.080078e-51 | -8.615850e-47 |
| Msa0618170 | Msa1166400 | 0.839122 | 1.914009e-57 | -8.615850e-47 |
| Msa0618170 | Msa1169990 | 0.820216 | 7.709930e-53 | -8.615850e-47 |
| Msa0618170 | Msa1201160 | 0.805310 | 1.419635e-49 | -8.615850e-47 |
| Msa0618170 | Msa1355400 | 0.812157 | 4.883914e-51 | -8.615850e-47 |
| Msa0618170 | Msa1414930 | 0.800924 | 1.147012e-48 | -8.615850e-47 |
| Msa0618170 | Msa1420060 | 0.846092 | 2.698327e-59 | -8.615850e-47 |
| Msa0618170 | Msa1421550 | 0.831528 | 1.586331e-55 | -8.615850e-47 |
| Msa0203160 | Msa0618170 | 0.804952 | 1.687481e-49 | -8.615850e-47 |
| Msa0219190 | Msa0618170 | 0.839983 | 1.143441e-57 | -8.615850e-47 |
| Msa0370600 | Msa0618170 | 0.807307 | 5.389360e-50 | -8.615850e-47 |
| Msa0408640 | Msa0618170 | 0.812527 | 4.052877e-51 | -8.615850e-47 |
| Msa0418200 | Msa0618170 | 0.805171 | 1.518550e-49 | -8.615850e-47 |
| Msa0464540 | Msa0618170 | 0.800118 | 1.674735e-48 | -8.615850e-47 |
| Msa0298240 | Msa0618170 | 0.830972 | 2.172612e-55 | -8.615850e-47 |
| Msa0336090 | Msa0618170 | 0.800776 | 1.229981e-48 | -8.615850e-47 |
| Msa0351510 | Msa0618170 | 0.800198 | 1.612436e-48 | -8.615850e-47 |
| Msa0359250 | Msa0618170 | 0.803309 | 3.707232e-49 | -8.615850e-47 |
| Msa0361260 | Msa0618170 | 0.813393 | 2.618276e-51 | -8.615850e-47 |
| Msa0537920 | Msa0618170 | 0.807538 | 4.812898e-50 | -8.615850e-47 |
| Msa0538220 | Msa0618170 | 0.807123 | 5.894336e-50 | -8.615850e-47 |
| Msa0543850 | Msa0618170 | 0.806373 | 8.491435e-50 | -8.615850e-47 |
| Msa0578320 | Msa0618170 | 0.923809 | 1.625726e-89 | -8.615850e-47 |
| Msa0601110 | Msa0618170 | 0.807213 | 5.641820e-50 | -8.615850e-47 |
| Msa0601120 | Msa0618170 | 0.801217 | 9.993307e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618170 | MtrunA17_Chr8g0380041 | 97.245 | 363 | 10 | 0 | 1 | 363 | 1 | 363 | 0.0 | 723 |
| Msa0618170 | MtrunA17_Chr3g0086641 | 74.444 | 360 | 89 | 3 | 6 | 363 | 12 | 370 | 0.0 | 556 |
| Msa0618170 | MtrunA17_Chr2g0285061 | 71.781 | 365 | 101 | 2 | 1 | 363 | 1 | 365 | 0.0 | 540 |
| Msa0618170 | MtrunA17_Chr3g0077571 | 52.975 | 353 | 159 | 7 | 12 | 363 | 11 | 357 | 1.04e-128 | 373 |
| Msa0618170 | MtrunA17_Chr3g0077581 | 57.059 | 340 | 140 | 5 | 28 | 363 | 33 | 370 | 1.73e-128 | 373 |
| Msa0618170 | MtrunA17_Chr8g0380031 | 48.276 | 348 | 156 | 6 | 23 | 363 | 76 | 406 | 2.97e-109 | 325 |
| Msa0618170 | MtrunA17_Chr2g0284991 | 47.139 | 367 | 179 | 7 | 3 | 362 | 1 | 359 | 5.99e-109 | 323 |
| Msa0618170 | MtrunA17_Chr3g0085881 | 48.071 | 337 | 161 | 6 | 27 | 362 | 29 | 352 | 3.70e-108 | 320 |
| Msa0618170 | MtrunA17_Chr2g0284951 | 46.995 | 366 | 178 | 7 | 1 | 362 | 1 | 354 | 7.49e-108 | 320 |
| Msa0618170 | MtrunA17_Chr2g0284921 | 47.674 | 344 | 167 | 6 | 24 | 363 | 27 | 361 | 6.61e-107 | 318 |
| Msa0618170 | MtrunA17_Chr2g0285001 | 47.606 | 355 | 174 | 8 | 12 | 362 | 14 | 360 | 6.64e-106 | 315 |
| Msa0618170 | MtrunA17_Chr3g0131321 | 43.666 | 371 | 191 | 7 | 7 | 362 | 1 | 368 | 8.47e-106 | 316 |
| Msa0618170 | MtrunA17_Chr4g0017431 | 43.014 | 365 | 200 | 6 | 4 | 363 | 2 | 363 | 8.42e-104 | 310 |
| Msa0618170 | MtrunA17_Chr2g0284941 | 45.652 | 368 | 160 | 10 | 4 | 362 | 2 | 338 | 5.14e-101 | 302 |
| Msa0618170 | MtrunA17_Chr5g0434621 | 44.828 | 319 | 165 | 9 | 33 | 346 | 27 | 339 | 3.18e-86 | 265 |
| Msa0618170 | MtrunA17_Chr2g0294301 | 39.833 | 359 | 207 | 7 | 8 | 362 | 14 | 367 | 4.23e-85 | 262 |
| Msa0618170 | MtrunA17_Chr2g0294311 | 37.736 | 371 | 214 | 7 | 5 | 362 | 6 | 372 | 2.86e-84 | 260 |
| Msa0618170 | MtrunA17_Chr4g0068441 | 40.118 | 339 | 196 | 6 | 28 | 362 | 32 | 367 | 3.78e-81 | 252 |
| Msa0618170 | MtrunA17_Chr7g0275011 | 38.095 | 357 | 213 | 6 | 11 | 363 | 14 | 366 | 1.51e-74 | 235 |
| Msa0618170 | MtrunA17_Chr7g0274991 | 36.088 | 363 | 226 | 5 | 4 | 363 | 6 | 365 | 8.24e-74 | 233 |
| Msa0618170 | MtrunA17_Chr7g0275021 | 36.338 | 355 | 218 | 6 | 13 | 363 | 16 | 366 | 8.94e-73 | 230 |
| Msa0618170 | MtrunA17_Chr8g0374101 | 36.565 | 361 | 206 | 8 | 15 | 363 | 27 | 376 | 1.08e-71 | 228 |
| Msa0618170 | MtrunA17_Chr5g0396511 | 36.036 | 333 | 206 | 5 | 33 | 361 | 48 | 377 | 6.97e-71 | 226 |
| Msa0618170 | MtrunA17_Chr1g0182811 | 36.639 | 363 | 222 | 6 | 6 | 363 | 8 | 367 | 1.76e-70 | 224 |
| Msa0618170 | MtrunA17_Chr1g0189901 | 38.801 | 317 | 187 | 5 | 32 | 344 | 32 | 345 | 2.20e-70 | 224 |
| Msa0618170 | MtrunA17_Chr1g0189931 | 37.764 | 331 | 198 | 6 | 32 | 358 | 33 | 359 | 1.96e-69 | 222 |
| Msa0618170 | MtrunA17_Chr7g0275001 | 35.754 | 358 | 222 | 6 | 11 | 363 | 4 | 358 | 2.63e-69 | 221 |
| Msa0618170 | MtrunA17_Chr3g0092131 | 38.235 | 340 | 192 | 10 | 10 | 340 | 3 | 333 | 3.52e-69 | 221 |
| Msa0618170 | MtrunA17_Chr4g0008851 | 36.202 | 337 | 207 | 6 | 32 | 363 | 33 | 366 | 1.10e-67 | 217 |
| Msa0618170 | MtrunA17_Chr3g0099161 | 36.216 | 370 | 210 | 10 | 8 | 363 | 69 | 426 | 6.65e-67 | 217 |
| Msa0618170 | MtrunA17_Chr4g0060811 | 38.924 | 316 | 178 | 8 | 33 | 340 | 29 | 337 | 1.19e-66 | 214 |
| Msa0618170 | MtrunA17_Chr1g0156911 | 36.127 | 346 | 203 | 8 | 1 | 334 | 1 | 340 | 2.74e-66 | 213 |
| Msa0618170 | MtrunA17_Chr6g0457921 | 37.202 | 336 | 199 | 7 | 11 | 339 | 9 | 339 | 7.56e-66 | 213 |
| Msa0618170 | MtrunA17_Chr3g0099151 | 36.267 | 375 | 208 | 11 | 6 | 363 | 62 | 422 | 1.09e-65 | 214 |
| Msa0618170 | MtrunA17_Chr1g0156921 | 34.770 | 348 | 202 | 7 | 1 | 334 | 10 | 346 | 3.01e-65 | 211 |
| Msa0618170 | MtrunA17_Chr5g0444401 | 35.440 | 364 | 212 | 10 | 11 | 360 | 5 | 359 | 8.31e-65 | 209 |
| Msa0618170 | MtrunA17_Chr1g0156901 | 36.774 | 310 | 188 | 5 | 29 | 334 | 48 | 353 | 3.69e-62 | 203 |
| Msa0618170 | MtrunA17_Chr1g0156931 | 35.045 | 331 | 205 | 6 | 7 | 333 | 18 | 342 | 4.10e-62 | 202 |
| Msa0618170 | MtrunA17_Chr4g0027521 | 36.364 | 352 | 199 | 10 | 16 | 355 | 12 | 350 | 8.60e-62 | 201 |
| Msa0618170 | MtrunA17_Chr1g0189891 | 35.440 | 364 | 213 | 12 | 9 | 363 | 6 | 356 | 1.12e-60 | 199 |
| Msa0618170 | MtrunA17_Chr7g0215961 | 33.144 | 353 | 218 | 7 | 13 | 363 | 16 | 352 | 1.61e-60 | 198 |
| Msa0618170 | MtrunA17_Chr2g0320671 | 35.312 | 337 | 204 | 8 | 10 | 340 | 12 | 340 | 1.75e-60 | 198 |
| Msa0618170 | MtrunA17_Chr1g0156891 | 35.736 | 333 | 202 | 7 | 10 | 334 | 19 | 347 | 2.54e-60 | 198 |
| Msa0618170 | MtrunA17_Chr5g0438621 | 34.524 | 336 | 207 | 7 | 12 | 340 | 11 | 340 | 2.61e-60 | 197 |
| Msa0618170 | MtrunA17_Chr3g0120861 | 36.364 | 319 | 192 | 7 | 28 | 340 | 35 | 348 | 1.85e-59 | 196 |
| Msa0618170 | MtrunA17_Chr3g0085231 | 34.511 | 368 | 216 | 9 | 1 | 362 | 1 | 349 | 3.19e-59 | 195 |
| Msa0618170 | MtrunA17_Chr3g0142921 | 34.412 | 340 | 208 | 8 | 6 | 334 | 5 | 340 | 4.76e-59 | 194 |
| Msa0618170 | MtrunA17_Chr5g0438641 | 36.391 | 338 | 198 | 9 | 12 | 341 | 15 | 343 | 1.02e-58 | 194 |
| Msa0618170 | MtrunA17_Chr2g0330781 | 37.538 | 325 | 185 | 10 | 26 | 340 | 26 | 342 | 2.51e-58 | 192 |
| Msa0618170 | MtrunA17_Chr5g0438631 | 34.311 | 341 | 212 | 8 | 7 | 340 | 4 | 339 | 2.67e-58 | 192 |
| Msa0618170 | MtrunA17_Chr8g0341001 | 36.070 | 341 | 201 | 10 | 10 | 340 | 10 | 343 | 7.19e-58 | 191 |
| Msa0618170 | MtrunA17_Chr3g0099231 | 32.337 | 368 | 216 | 12 | 11 | 363 | 12 | 361 | 1.03e-57 | 192 |
| Msa0618170 | MtrunA17_Chr5g0405831 | 34.006 | 347 | 214 | 8 | 6 | 341 | 14 | 356 | 3.66e-57 | 190 |
| Msa0618170 | MtrunA17_Chr3g0105401 | 34.402 | 343 | 213 | 8 | 6 | 340 | 1 | 339 | 1.76e-56 | 187 |
| Msa0618170 | MtrunA17_Chr3g0142941 | 33.548 | 310 | 198 | 5 | 29 | 334 | 45 | 350 | 5.77e-56 | 187 |
| Msa0618170 | MtrunA17_Chr8g0371491 | 34.870 | 347 | 207 | 9 | 6 | 340 | 7 | 346 | 1.00e-55 | 186 |
| Msa0618170 | MtrunA17_Chr5g0432101 | 35.647 | 317 | 191 | 8 | 33 | 341 | 35 | 346 | 4.16e-55 | 184 |
| Msa0618170 | MtrunA17_Chr5g0405821 | 33.046 | 348 | 217 | 9 | 6 | 341 | 14 | 357 | 5.46e-54 | 182 |
| Msa0618170 | MtrunA17_Chr2g0283191 | 30.682 | 352 | 219 | 9 | 4 | 335 | 6 | 352 | 6.89e-54 | 181 |
| Msa0618170 | MtrunA17_Chr8g0371481 | 31.595 | 326 | 215 | 6 | 30 | 350 | 40 | 362 | 1.45e-52 | 178 |
| Msa0618170 | MtrunA17_Chr5g0420811 | 32.092 | 349 | 209 | 11 | 10 | 348 | 10 | 340 | 1.19e-51 | 175 |
| Msa0618170 | MtrunA17_Chr8g0370951 | 31.937 | 382 | 225 | 11 | 1 | 362 | 1 | 367 | 2.54e-51 | 175 |
| Msa0618170 | MtrunA17_Chr8g0371471 | 30.982 | 326 | 216 | 6 | 30 | 350 | 40 | 361 | 1.12e-50 | 173 |
| Msa0618170 | MtrunA17_Chr5g0437421 | 32.817 | 323 | 201 | 7 | 28 | 339 | 29 | 346 | 1.41e-48 | 167 |
| Msa0618170 | MtrunA17_Chr4g0046151 | 30.571 | 350 | 222 | 10 | 7 | 342 | 15 | 357 | 3.04e-48 | 167 |
| Msa0618170 | MtrunA17_Chr6g0459921 | 35.223 | 247 | 155 | 4 | 118 | 363 | 119 | 361 | 1.21e-47 | 165 |
| Msa0618170 | MtrunA17_Chr6g0455661 | 37.395 | 238 | 133 | 4 | 138 | 363 | 239 | 472 | 2.49e-47 | 167 |
| Msa0618170 | MtrunA17_Chr6g0455661 | 48.438 | 128 | 64 | 2 | 1 | 127 | 1 | 127 | 1.60e-27 | 112 |
| Msa0618170 | MtrunA17_Chr2g0301641 | 35.256 | 312 | 183 | 10 | 33 | 333 | 45 | 348 | 1.84e-46 | 162 |
| Msa0618170 | MtrunA17_Chr2g0284931 | 36.626 | 243 | 127 | 5 | 122 | 363 | 4 | 220 | 1.68e-45 | 155 |
| Msa0618170 | MtrunA17_Chr8g0344941 | 30.530 | 321 | 209 | 7 | 33 | 345 | 43 | 357 | 5.75e-45 | 158 |
| Msa0618170 | MtrunA17_Chr8g0349341 | 31.889 | 323 | 199 | 8 | 33 | 346 | 39 | 349 | 4.84e-42 | 150 |
| Msa0618170 | MtrunA17_Chr1g0157001 | 31.546 | 317 | 196 | 7 | 36 | 346 | 41 | 342 | 1.17e-41 | 149 |
| Msa0618170 | MtrunA17_Chr8g0370981 | 29.197 | 411 | 226 | 11 | 8 | 361 | 15 | 417 | 1.82e-41 | 150 |
| Msa0618170 | MtrunA17_Chr8g0349321 | 31.481 | 324 | 199 | 9 | 33 | 346 | 39 | 349 | 7.07e-41 | 147 |
| Msa0618170 | MtrunA17_Chr8g0344931 | 30.473 | 338 | 213 | 12 | 33 | 363 | 39 | 361 | 4.75e-37 | 137 |
| Msa0618170 | MtrunA17_Chr1g0160101 | 27.487 | 382 | 230 | 10 | 9 | 358 | 20 | 386 | 5.48e-35 | 132 |
| Msa0618170 | MtrunA17_Chr8g0349301 | 29.412 | 323 | 199 | 9 | 1 | 310 | 1 | 307 | 2.53e-33 | 126 |
| Msa0618170 | MtrunA17_Chr1g0160031 | 29.330 | 358 | 219 | 11 | 7 | 339 | 13 | 361 | 3.05e-33 | 127 |
| Msa0618170 | MtrunA17_Chr2g0285041 | 44.355 | 124 | 68 | 1 | 83 | 205 | 1 | 124 | 4.95e-33 | 120 |
| Msa0618170 | MtrunA17_Chr8g0370961 | 30.672 | 238 | 150 | 6 | 128 | 361 | 17 | 243 | 7.92e-33 | 122 |
| Msa0618170 | MtrunA17_Chr1g0160011 | 27.577 | 359 | 225 | 10 | 7 | 339 | 13 | 362 | 1.13e-31 | 123 |
| Msa0618170 | MtrunA17_Chr8g0349331 | 26.741 | 359 | 208 | 9 | 1 | 346 | 1 | 317 | 1.59e-31 | 121 |
| Msa0618170 | MtrunA17_Chr5g0440501 | 28.455 | 246 | 164 | 5 | 128 | 362 | 6 | 250 | 1.71e-31 | 119 |
| Msa0618170 | MtrunA17_Chr7g0229591 | 38.144 | 194 | 109 | 6 | 10 | 199 | 12 | 198 | 9.85e-31 | 116 |
| Msa0618170 | MtrunA17_Chr1g0159991 | 27.371 | 369 | 226 | 10 | 1 | 339 | 4 | 360 | 1.06e-30 | 120 |
| Msa0618170 | MtrunA17_Chr7g0254461 | 27.222 | 360 | 224 | 10 | 28 | 358 | 40 | 390 | 1.39e-30 | 120 |
| Msa0618170 | MtrunA17_Chr8g0381581 | 27.568 | 370 | 220 | 12 | 6 | 342 | 16 | 370 | 3.67e-29 | 116 |
| Msa0618170 | MtrunA17_Chr4g0027571 | 31.905 | 210 | 139 | 3 | 131 | 339 | 3 | 209 | 1.56e-28 | 110 |
| Msa0618170 | MtrunA17_Chr6g0450731 | 26.453 | 344 | 217 | 9 | 30 | 355 | 32 | 357 | 2.76e-27 | 110 |
| Msa0618170 | MtrunA17_Chr6g0450721 | 27.807 | 374 | 232 | 12 | 1 | 355 | 1 | 355 | 3.21e-27 | 110 |
| Msa0618170 | MtrunA17_Chr1g0159981 | 25.464 | 377 | 245 | 10 | 7 | 356 | 20 | 387 | 4.61e-27 | 110 |
| Msa0618170 | MtrunA17_Chr8g0347751 | 27.083 | 336 | 209 | 9 | 33 | 341 | 38 | 364 | 4.65e-27 | 110 |
| Msa0618170 | MtrunA17_Chr7g0275291 | 24.468 | 376 | 242 | 11 | 7 | 354 | 9 | 370 | 4.97e-27 | 110 |
| Msa0618170 | MtrunA17_Chr7g0271551 | 27.647 | 340 | 214 | 10 | 22 | 346 | 29 | 351 | 1.27e-26 | 108 |
| Msa0618170 | MtrunA17_Chr4g0057991 | 26.124 | 356 | 231 | 11 | 6 | 340 | 12 | 356 | 2.79e-26 | 108 |
| Msa0618170 | MtrunA17_Chr2g0283511 | 27.945 | 365 | 228 | 12 | 1 | 340 | 1 | 355 | 3.21e-26 | 108 |
| Msa0618170 | MtrunA17_Chr3g0104821 | 25.959 | 339 | 205 | 12 | 33 | 341 | 46 | 368 | 5.03e-26 | 107 |
| Msa0618170 | MtrunA17_Chr7g0273101 | 26.870 | 361 | 227 | 10 | 30 | 363 | 28 | 378 | 1.02e-25 | 106 |
| Msa0618170 | MtrunA17_Chr1g0159971 | 28.402 | 338 | 196 | 11 | 33 | 339 | 49 | 371 | 8.08e-25 | 104 |
| Msa0618170 | MtrunA17_Chr6g0469511 | 44.348 | 115 | 59 | 3 | 26 | 136 | 25 | 138 | 2.53e-24 | 97.1 |
| Msa0618170 | MtrunA17_Chr7g0226941 | 27.401 | 354 | 218 | 11 | 30 | 355 | 32 | 374 | 4.17e-24 | 102 |
| Msa0618170 | MtrunA17_Chr6g0450701 | 29.326 | 341 | 200 | 12 | 28 | 342 | 36 | 361 | 8.56e-24 | 101 |
| Msa0618170 | MtrunA17_Chr4g0027561 | 45.690 | 116 | 56 | 3 | 10 | 121 | 12 | 124 | 1.07e-23 | 95.5 |
| Msa0618170 | MtrunA17_Chr2g0301581 | 26.374 | 364 | 222 | 14 | 1 | 341 | 1 | 341 | 4.34e-23 | 99.0 |
| Msa0618170 | MtrunA17_Chr7g0226911 | 22.997 | 387 | 244 | 10 | 10 | 355 | 7 | 380 | 6.60e-23 | 98.6 |
| Msa0618170 | MtrunA17_Chr7g0226931 | 23.077 | 403 | 249 | 12 | 10 | 363 | 10 | 400 | 7.37e-23 | 99.0 |
| Msa0618170 | MtrunA17_Chr2g0317261 | 26.099 | 364 | 215 | 14 | 7 | 341 | 1 | 339 | 9.18e-23 | 97.8 |
| Msa0618170 | MtrunA17_Chr6g0450711 | 26.593 | 361 | 206 | 13 | 30 | 355 | 121 | 457 | 1.01e-22 | 99.0 |
| Msa0618170 | MtrunA17_Chr2g0317271 | 26.374 | 364 | 214 | 14 | 7 | 341 | 1 | 339 | 1.86e-22 | 97.1 |
| Msa0618170 | MtrunA17_Chr8g0352901 | 26.870 | 361 | 228 | 10 | 13 | 345 | 6 | 358 | 2.42e-22 | 97.1 |
| Msa0618170 | MtrunA17_Chr2g0301541 | 26.099 | 364 | 223 | 14 | 1 | 341 | 1 | 341 | 6.25e-22 | 95.5 |
| Msa0618170 | MtrunA17_Chr0c01g0489581 | 25.691 | 362 | 217 | 13 | 7 | 341 | 3 | 339 | 8.18e-22 | 95.1 |
| Msa0618170 | MtrunA17_Chr0c01g0489571 | 25.691 | 362 | 217 | 13 | 7 | 341 | 3 | 339 | 1.77e-21 | 94.4 |
| Msa0618170 | MtrunA17_Chr2g0283481 | 25.348 | 359 | 233 | 13 | 6 | 340 | 22 | 369 | 1.77e-21 | 94.7 |
| Msa0618170 | MtrunA17_Chr2g0321991 | 46.847 | 111 | 51 | 5 | 10 | 113 | 10 | 119 | 6.60e-21 | 87.4 |
| Msa0618170 | MtrunA17_Chr3g0112821 | 25.617 | 324 | 217 | 10 | 33 | 341 | 32 | 346 | 6.71e-21 | 92.8 |
| Msa0618170 | MtrunA17_Chr7g0229581 | 34.028 | 144 | 94 | 1 | 206 | 348 | 8 | 151 | 8.65e-21 | 88.2 |
| Msa0618170 | MtrunA17_Chr1g0189911 | 29.577 | 142 | 99 | 1 | 217 | 358 | 1 | 141 | 9.26e-21 | 87.8 |
| Msa0618170 | MtrunA17_Chr1g0191461 | 26.239 | 343 | 209 | 11 | 30 | 342 | 30 | 358 | 1.02e-20 | 92.4 |
| Msa0618170 | MtrunA17_Chr1g0178941 | 24.768 | 323 | 200 | 12 | 33 | 335 | 42 | 341 | 1.12e-20 | 92.0 |
| Msa0618170 | MtrunA17_Chr2g0283501 | 26.437 | 348 | 222 | 13 | 13 | 336 | 13 | 350 | 2.06e-20 | 91.3 |
| Msa0618170 | MtrunA17_Chr1g0178931 | 26.562 | 320 | 190 | 14 | 33 | 335 | 39 | 330 | 2.39e-20 | 90.9 |
| Msa0618170 | MtrunA17_Chr3g0093031 | 25.373 | 335 | 209 | 13 | 33 | 341 | 32 | 351 | 4.29e-19 | 87.4 |
| Msa0618170 | MtrunA17_Chr1g0189921 | 48.958 | 96 | 44 | 3 | 31 | 122 | 31 | 125 | 1.03e-18 | 82.0 |
| Msa0618170 | MtrunA17_Chr7g0228261 | 41.111 | 90 | 52 | 1 | 274 | 363 | 4 | 92 | 3.70e-18 | 79.0 |
| Msa0618170 | MtrunA17_Chr7g0266061 | 26.433 | 314 | 199 | 12 | 33 | 335 | 44 | 336 | 4.93e-18 | 84.3 |
| Msa0618170 | MtrunA17_Chr1g0198351 | 26.814 | 317 | 192 | 13 | 33 | 335 | 45 | 335 | 4.32e-17 | 81.6 |
| Msa0618170 | MtrunA17_Chr8g0370971 | 45.000 | 100 | 47 | 2 | 30 | 121 | 37 | 136 | 8.19e-17 | 77.4 |
| Msa0618170 | MtrunA17_Chr2g0283531 | 26.048 | 334 | 210 | 15 | 33 | 341 | 33 | 354 | 1.21e-16 | 80.5 |
| Msa0618170 | MtrunA17_Chr8g0339251 | 27.244 | 312 | 197 | 10 | 13 | 310 | 6 | 301 | 3.46e-16 | 78.6 |
| Msa0618170 | MtrunA17_Chr2g0285051 | 63.793 | 58 | 20 | 1 | 28 | 84 | 33 | 90 | 3.05e-15 | 71.6 |
| Msa0618170 | MtrunA17_Chr3g0112691 | 25.519 | 337 | 204 | 12 | 33 | 341 | 32 | 349 | 4.06e-15 | 75.9 |
| Msa0618170 | MtrunA17_Chr4g0018571 | 34.862 | 109 | 70 | 1 | 239 | 346 | 64 | 172 | 4.10e-15 | 72.8 |
| Msa0618170 | MtrunA17_Chr2g0301591 | 26.316 | 304 | 188 | 12 | 1 | 289 | 1 | 283 | 1.65e-14 | 73.2 |
| Msa0618170 | MtrunA17_Chr3g0096551 | 23.429 | 350 | 209 | 13 | 33 | 341 | 31 | 362 | 3.52e-14 | 73.2 |
| Msa0618170 | MtrunA17_Chr2g0308201 | 44.048 | 84 | 46 | 1 | 1 | 83 | 5 | 88 | 1.68e-13 | 65.9 |
| Msa0618170 | MtrunA17_Chr3g0104831 | 22.794 | 272 | 168 | 9 | 97 | 341 | 31 | 287 | 1.82e-13 | 70.5 |
| Msa0618170 | MtrunA17_Chr4g0018561 | 58.182 | 55 | 21 | 1 | 26 | 78 | 25 | 79 | 2.05e-13 | 65.9 |
| Msa0618170 | MtrunA17_Chr2g0301551 | 24.555 | 281 | 172 | 10 | 80 | 341 | 38 | 297 | 7.15e-13 | 68.6 |
| Msa0618170 | MtrunA17_Chr2g0285031 | 45.946 | 74 | 36 | 3 | 290 | 362 | 7 | 77 | 1.02e-12 | 63.2 |
| Msa0618170 | MtrunA17_Chr1g0198391 | 23.167 | 341 | 194 | 11 | 33 | 335 | 35 | 345 | 1.23e-12 | 68.6 |
| Msa0618170 | MtrunA17_Chr2g0284981 | 41.026 | 78 | 36 | 3 | 289 | 362 | 8 | 79 | 1.21e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618170 | AT1G29670.2 | 67.213 | 366 | 116 | 2 | 1 | 363 | 67 | 431 | 0.0 | 521 |
| Msa0618170 | AT1G29670.1 | 67.582 | 364 | 114 | 2 | 3 | 363 | 1 | 363 | 0.0 | 518 |
| Msa0618170 | AT5G45670.1 | 68.258 | 356 | 112 | 1 | 9 | 363 | 7 | 362 | 0.0 | 516 |
| Msa0618170 | AT4G18970.1 | 72.861 | 339 | 91 | 1 | 26 | 363 | 23 | 361 | 0.0 | 514 |
| Msa0618170 | AT4G18970.2 | 72.647 | 340 | 92 | 1 | 25 | 363 | 22 | 361 | 0.0 | 514 |
| Msa0618170 | AT1G29660.1 | 67.887 | 355 | 114 | 0 | 9 | 363 | 10 | 364 | 0.0 | 513 |
| Msa0618170 | AT1G33811.1 | 51.882 | 372 | 168 | 6 | 1 | 363 | 1 | 370 | 3.47e-129 | 375 |
| Msa0618170 | AT1G71691.2 | 50.294 | 340 | 163 | 6 | 25 | 363 | 49 | 383 | 1.21e-117 | 346 |
| Msa0618170 | AT5G08460.1 | 46.027 | 365 | 187 | 6 | 6 | 363 | 24 | 385 | 6.97e-112 | 332 |
| Msa0618170 | AT5G15720.1 | 48.680 | 341 | 169 | 5 | 27 | 363 | 26 | 364 | 1.95e-110 | 327 |
| Msa0618170 | AT1G71250.1 | 45.125 | 359 | 190 | 6 | 9 | 363 | 18 | 373 | 1.56e-105 | 315 |
| Msa0618170 | AT2G19010.1 | 45.161 | 341 | 161 | 8 | 28 | 362 | 27 | 347 | 1.75e-97 | 293 |
| Msa0618170 | AT2G19010.2 | 45.161 | 341 | 161 | 8 | 28 | 362 | 57 | 377 | 3.19e-97 | 294 |
| Msa0618170 | AT2G19050.1 | 45.029 | 342 | 162 | 7 | 28 | 363 | 28 | 349 | 2.91e-96 | 290 |
| Msa0618170 | AT2G19060.1 | 43.266 | 349 | 173 | 8 | 3 | 345 | 6 | 335 | 4.23e-91 | 277 |
| Msa0618170 | AT1G71691.1 | 46.127 | 284 | 148 | 5 | 80 | 363 | 4 | 282 | 2.97e-89 | 270 |
| Msa0618170 | AT4G30140.1 | 46.108 | 334 | 162 | 7 | 28 | 360 | 30 | 346 | 3.74e-88 | 270 |
| Msa0618170 | AT1G71691.3 | 49.813 | 267 | 129 | 5 | 25 | 290 | 49 | 311 | 3.41e-83 | 256 |
| Msa0618170 | AT5G15720.3 | 44.792 | 288 | 153 | 5 | 80 | 363 | 48 | 333 | 1.81e-81 | 252 |
| Msa0618170 | AT2G19050.2 | 47.547 | 265 | 123 | 4 | 28 | 291 | 28 | 277 | 2.64e-81 | 249 |
| Msa0618170 | AT5G15720.2 | 48.134 | 268 | 134 | 4 | 27 | 290 | 26 | 292 | 3.48e-79 | 245 |
| Msa0618170 | AT5G37690.1 | 40.407 | 344 | 194 | 8 | 6 | 344 | 2 | 339 | 9.74e-78 | 243 |
| Msa0618170 | AT2G23540.1 | 39.359 | 343 | 191 | 7 | 33 | 363 | 50 | 387 | 5.62e-77 | 242 |
| Msa0618170 | AT5G33370.1 | 38.438 | 333 | 197 | 6 | 32 | 360 | 31 | 359 | 1.97e-74 | 235 |
| Msa0618170 | AT3G50400.1 | 39.474 | 342 | 193 | 9 | 33 | 363 | 36 | 374 | 1.48e-73 | 233 |
| Msa0618170 | AT5G37690.2 | 38.953 | 344 | 191 | 9 | 6 | 344 | 2 | 331 | 5.63e-73 | 231 |
| Msa0618170 | AT4G10950.2 | 36.176 | 340 | 210 | 5 | 27 | 362 | 67 | 403 | 5.91e-73 | 232 |
| Msa0618170 | AT4G10950.1 | 35.882 | 340 | 207 | 6 | 27 | 362 | 67 | 399 | 6.57e-70 | 224 |
| Msa0618170 | AT3G04290.1 | 37.168 | 339 | 201 | 7 | 27 | 358 | 23 | 356 | 1.39e-68 | 220 |
| Msa0618170 | AT4G28780.1 | 37.313 | 335 | 204 | 5 | 32 | 363 | 32 | 363 | 2.77e-67 | 216 |
| Msa0618170 | AT1G74460.1 | 37.278 | 338 | 198 | 10 | 10 | 340 | 3 | 333 | 7.33e-65 | 210 |
| Msa0618170 | AT3G53100.1 | 37.539 | 317 | 189 | 6 | 29 | 340 | 27 | 339 | 3.38e-63 | 206 |
| Msa0618170 | AT5G18430.1 | 35.514 | 321 | 202 | 3 | 32 | 348 | 29 | 348 | 1.23e-62 | 204 |
| Msa0618170 | AT5G41890.1 | 36.676 | 349 | 197 | 10 | 33 | 363 | 33 | 375 | 2.10e-62 | 204 |
| Msa0618170 | AT5G03820.2 | 35.897 | 351 | 209 | 9 | 3 | 341 | 28 | 374 | 6.14e-62 | 203 |
| Msa0618170 | AT5G03820.1 | 36.023 | 347 | 206 | 9 | 7 | 341 | 4 | 346 | 2.20e-61 | 201 |
| Msa0618170 | AT2G04570.1 | 35.429 | 350 | 212 | 8 | 8 | 350 | 6 | 348 | 2.25e-61 | 201 |
| Msa0618170 | AT5G03810.1 | 36.550 | 342 | 206 | 8 | 7 | 341 | 5 | 342 | 6.33e-61 | 199 |
| Msa0618170 | AT5G22810.1 | 34.473 | 351 | 215 | 9 | 1 | 340 | 1 | 347 | 1.83e-60 | 199 |
| Msa0618170 | AT5G55050.1 | 37.462 | 331 | 187 | 10 | 18 | 335 | 26 | 349 | 4.57e-60 | 198 |
| Msa0618170 | AT2G42990.1 | 34.211 | 342 | 208 | 9 | 12 | 345 | 11 | 343 | 9.15e-59 | 194 |
| Msa0618170 | AT5G42170.1 | 33.856 | 319 | 199 | 6 | 29 | 342 | 48 | 359 | 7.14e-58 | 192 |
| Msa0618170 | AT3G16370.1 | 37.267 | 322 | 184 | 10 | 29 | 340 | 28 | 341 | 2.01e-56 | 188 |
| Msa0618170 | AT2G31540.1 | 35.647 | 317 | 193 | 8 | 25 | 334 | 29 | 341 | 3.56e-56 | 187 |
| Msa0618170 | AT1G06990.1 | 35.535 | 318 | 193 | 7 | 30 | 340 | 36 | 348 | 8.62e-56 | 186 |
| Msa0618170 | AT1G75880.1 | 34.451 | 328 | 206 | 6 | 20 | 341 | 41 | 365 | 8.70e-56 | 187 |
| Msa0618170 | AT1G75880.2 | 34.756 | 328 | 204 | 7 | 20 | 341 | 41 | 364 | 9.53e-56 | 187 |
| Msa0618170 | AT4G16230.1 | 43.049 | 223 | 123 | 3 | 25 | 244 | 24 | 245 | 1.16e-55 | 183 |
| Msa0618170 | AT4G26790.1 | 34.169 | 319 | 199 | 7 | 28 | 340 | 26 | 339 | 2.28e-55 | 185 |
| Msa0618170 | AT4G26790.2 | 34.169 | 319 | 199 | 7 | 28 | 340 | 26 | 339 | 2.28e-55 | 185 |
| Msa0618170 | AT2G30310.1 | 33.807 | 352 | 207 | 10 | 9 | 341 | 8 | 352 | 1.13e-54 | 184 |
| Msa0618170 | AT2G30220.1 | 33.708 | 356 | 201 | 11 | 9 | 341 | 8 | 351 | 4.01e-54 | 182 |
| Msa0618170 | AT1G58430.1 | 33.951 | 324 | 198 | 9 | 27 | 338 | 31 | 350 | 5.17e-54 | 182 |
| Msa0618170 | AT1G75890.2 | 34.783 | 322 | 198 | 8 | 30 | 344 | 46 | 362 | 1.87e-53 | 181 |
| Msa0618170 | AT2G24560.1 | 33.962 | 318 | 197 | 9 | 25 | 334 | 28 | 340 | 1.99e-53 | 181 |
| Msa0618170 | AT1G75890.3 | 34.783 | 322 | 198 | 8 | 30 | 344 | 75 | 391 | 2.53e-53 | 181 |
| Msa0618170 | AT2G03980.2 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0618170 | AT2G03980.3 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0618170 | AT2G03980.1 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0618170 | AT2G03980.4 | 34.043 | 329 | 196 | 9 | 30 | 348 | 42 | 359 | 9.11e-53 | 179 |
| Msa0618170 | AT1G75900.1 | 33.022 | 321 | 203 | 7 | 20 | 333 | 30 | 345 | 9.31e-53 | 179 |
| Msa0618170 | AT3G14820.1 | 33.437 | 323 | 194 | 10 | 29 | 342 | 30 | 340 | 1.06e-52 | 178 |
| Msa0618170 | AT5G33370.2 | 38.258 | 264 | 156 | 5 | 31 | 290 | 30 | 290 | 1.71e-52 | 177 |
| Msa0618170 | AT5G63170.1 | 33.762 | 311 | 185 | 8 | 28 | 333 | 25 | 319 | 3.91e-52 | 176 |
| Msa0618170 | AT1G20120.1 | 32.308 | 325 | 197 | 8 | 30 | 342 | 77 | 390 | 1.77e-51 | 176 |
| Msa0618170 | AT1G20132.1 | 33.228 | 316 | 196 | 7 | 26 | 333 | 56 | 364 | 1.85e-51 | 176 |
| Msa0618170 | AT1G75890.1 | 33.234 | 334 | 200 | 8 | 30 | 344 | 46 | 375 | 1.25e-50 | 174 |
| Msa0618170 | AT1G73610.1 | 33.233 | 331 | 183 | 10 | 29 | 350 | 33 | 334 | 1.95e-50 | 172 |
| Msa0618170 | AT1G59406.1 | 32.081 | 346 | 210 | 11 | 7 | 340 | 5 | 337 | 7.47e-49 | 168 |
| Msa0618170 | AT1G59030.1 | 32.081 | 346 | 210 | 11 | 7 | 340 | 5 | 337 | 7.47e-49 | 168 |
| Msa0618170 | AT1G58725.1 | 32.081 | 346 | 210 | 11 | 7 | 340 | 5 | 337 | 7.47e-49 | 168 |
| Msa0618170 | AT1G20135.1 | 32.013 | 303 | 187 | 7 | 35 | 333 | 33 | 320 | 1.31e-48 | 167 |
| Msa0618170 | AT1G23500.1 | 33.229 | 319 | 192 | 7 | 29 | 342 | 33 | 335 | 1.39e-48 | 167 |
| Msa0618170 | AT5G45950.1 | 29.942 | 344 | 228 | 9 | 11 | 350 | 20 | 354 | 8.32e-48 | 166 |
| Msa0618170 | AT2G40250.1 | 29.429 | 333 | 220 | 6 | 27 | 349 | 32 | 359 | 1.46e-46 | 162 |
| Msa0618170 | AT1G20130.2 | 31.940 | 335 | 194 | 9 | 29 | 346 | 182 | 499 | 1.65e-45 | 163 |
| Msa0618170 | AT1G20130.1 | 31.940 | 335 | 194 | 9 | 29 | 346 | 202 | 519 | 3.15e-45 | 162 |
| Msa0618170 | AT1G58520.3 | 30.675 | 326 | 199 | 10 | 24 | 340 | 23 | 330 | 2.80e-43 | 153 |
| Msa0618170 | AT1G58525.1 | 30.675 | 326 | 199 | 10 | 24 | 340 | 23 | 330 | 2.80e-43 | 153 |
| Msa0618170 | AT5G45960.1 | 28.889 | 315 | 209 | 8 | 29 | 333 | 45 | 354 | 2.11e-42 | 152 |
| Msa0618170 | AT1G75930.1 | 30.233 | 344 | 213 | 10 | 6 | 341 | 8 | 332 | 1.57e-41 | 149 |
| Msa0618170 | AT3G43570.1 | 29.240 | 342 | 197 | 9 | 6 | 340 | 5 | 308 | 2.59e-41 | 147 |
| Msa0618170 | AT1G75920.2 | 29.107 | 347 | 219 | 9 | 9 | 342 | 1 | 333 | 4.57e-41 | 147 |
| Msa0618170 | AT1G53920.1 | 28.775 | 351 | 230 | 9 | 25 | 363 | 42 | 384 | 5.60e-39 | 143 |
| Msa0618170 | AT3G14225.2 | 30.409 | 342 | 220 | 9 | 33 | 363 | 39 | 373 | 1.28e-38 | 142 |
| Msa0618170 | AT3G14225.1 | 30.233 | 344 | 222 | 9 | 33 | 363 | 39 | 377 | 4.38e-38 | 140 |
| Msa0618170 | AT2G04020.1 | 39.437 | 213 | 114 | 6 | 30 | 236 | 42 | 245 | 6.44e-38 | 137 |
| Msa0618170 | AT1G71120.1 | 29.619 | 341 | 219 | 10 | 29 | 361 | 29 | 356 | 1.45e-37 | 139 |
| Msa0618170 | AT1G75920.1 | 28.358 | 335 | 204 | 9 | 30 | 342 | 23 | 343 | 4.64e-37 | 137 |
| Msa0618170 | AT2G24560.2 | 32.130 | 277 | 177 | 8 | 25 | 294 | 28 | 300 | 8.33e-37 | 135 |
| Msa0618170 | AT1G75910.1 | 28.613 | 346 | 222 | 9 | 9 | 342 | 1 | 333 | 2.15e-36 | 135 |
| Msa0618170 | AT2G04020.2 | 39.614 | 207 | 110 | 6 | 30 | 230 | 42 | 239 | 4.24e-36 | 134 |
| Msa0618170 | AT5G40990.1 | 29.846 | 325 | 211 | 9 | 33 | 346 | 39 | 357 | 4.62e-35 | 132 |
| Msa0618170 | AT1G53940.2 | 30.909 | 330 | 201 | 11 | 33 | 346 | 41 | 359 | 1.66e-34 | 130 |
| Msa0618170 | AT3G43550.1 | 30.169 | 295 | 183 | 9 | 6 | 290 | 5 | 286 | 1.71e-33 | 126 |
| Msa0618170 | AT1G53990.1 | 27.778 | 342 | 222 | 9 | 33 | 363 | 37 | 364 | 1.51e-31 | 122 |
| Msa0618170 | AT1G75920.3 | 26.377 | 345 | 200 | 9 | 9 | 342 | 1 | 302 | 2.66e-31 | 120 |
| Msa0618170 | AT1G75920.4 | 27.797 | 295 | 192 | 8 | 55 | 342 | 25 | 305 | 2.95e-31 | 120 |
| Msa0618170 | AT3G05180.1 | 28.895 | 353 | 218 | 11 | 30 | 357 | 35 | 379 | 1.61e-30 | 120 |
| Msa0618170 | AT1G54020.2 | 25.485 | 361 | 241 | 9 | 6 | 360 | 8 | 346 | 3.58e-29 | 116 |
| Msa0618170 | AT2G31550.1 | 30.332 | 211 | 140 | 5 | 135 | 342 | 2 | 208 | 3.82e-29 | 112 |
| Msa0618170 | AT3G48460.1 | 28.399 | 331 | 201 | 14 | 33 | 340 | 40 | 357 | 1.19e-28 | 115 |
| Msa0618170 | AT4G16233.1 | 41.860 | 129 | 73 | 2 | 236 | 363 | 3 | 130 | 3.47e-28 | 107 |
| Msa0618170 | AT1G54030.1 | 27.761 | 335 | 213 | 11 | 33 | 363 | 54 | 363 | 9.60e-28 | 113 |
| Msa0618170 | AT1G56670.1 | 25.275 | 364 | 243 | 9 | 7 | 354 | 16 | 366 | 3.12e-27 | 110 |
| Msa0618170 | AT3G27950.1 | 26.796 | 362 | 220 | 11 | 10 | 342 | 8 | 353 | 3.92e-27 | 110 |
| Msa0618170 | AT1G54790.3 | 25.538 | 372 | 232 | 11 | 7 | 347 | 8 | 365 | 1.40e-26 | 109 |
| Msa0618170 | AT1G31550.2 | 27.042 | 355 | 218 | 13 | 35 | 363 | 40 | 379 | 3.07e-26 | 108 |
| Msa0618170 | AT1G67830.1 | 27.746 | 346 | 201 | 12 | 28 | 339 | 27 | 357 | 8.31e-26 | 107 |
| Msa0618170 | AT1G54000.1 | 25.737 | 373 | 232 | 12 | 8 | 360 | 7 | 354 | 2.67e-25 | 105 |
| Msa0618170 | AT1G28650.1 | 28.012 | 332 | 203 | 13 | 35 | 341 | 41 | 361 | 4.68e-25 | 105 |
| Msa0618170 | AT1G28570.1 | 25.064 | 391 | 242 | 17 | 3 | 361 | 5 | 376 | 7.95e-25 | 104 |
| Msa0618170 | AT4G01130.1 | 25.490 | 357 | 226 | 12 | 10 | 336 | 11 | 357 | 8.64e-25 | 104 |
| Msa0618170 | AT1G28600.1 | 26.243 | 362 | 236 | 14 | 1 | 340 | 1 | 353 | 9.83e-25 | 104 |
| Msa0618170 | AT1G54010.1 | 24.725 | 364 | 245 | 9 | 6 | 360 | 11 | 354 | 1.38e-24 | 103 |
| Msa0618170 | AT1G54790.1 | 25.401 | 374 | 234 | 11 | 7 | 347 | 3 | 364 | 2.71e-24 | 102 |
| Msa0618170 | AT1G09390.1 | 26.176 | 340 | 224 | 9 | 30 | 354 | 36 | 363 | 3.08e-24 | 102 |
| Msa0618170 | AT1G53940.1 | 30.597 | 268 | 165 | 10 | 33 | 290 | 41 | 297 | 5.43e-24 | 100 |
| Msa0618170 | AT3G14220.1 | 27.824 | 363 | 228 | 14 | 13 | 360 | 7 | 350 | 7.49e-24 | 101 |
| Msa0618170 | AT5G14450.1 | 26.273 | 373 | 236 | 12 | 12 | 355 | 20 | 382 | 1.17e-23 | 101 |
| Msa0618170 | AT4G16220.1 | 49.533 | 107 | 50 | 2 | 9 | 113 | 10 | 114 | 2.96e-23 | 97.4 |
| Msa0618170 | AT1G31550.1 | 25.989 | 354 | 220 | 13 | 35 | 363 | 40 | 376 | 6.31e-23 | 99.4 |
| Msa0618170 | AT1G28580.1 | 25.150 | 334 | 210 | 12 | 35 | 341 | 41 | 361 | 7.16e-23 | 99.0 |
| Msa0618170 | AT1G28660.1 | 27.596 | 337 | 198 | 14 | 35 | 341 | 39 | 359 | 3.83e-22 | 97.1 |
| Msa0618170 | AT1G28640.1 | 26.727 | 333 | 206 | 13 | 35 | 341 | 39 | 359 | 3.87e-22 | 97.1 |
| Msa0618170 | AT3G14210.1 | 27.246 | 345 | 208 | 14 | 33 | 360 | 38 | 356 | 3.99e-22 | 97.1 |
| Msa0618170 | AT5G03610.1 | 26.168 | 321 | 194 | 13 | 33 | 335 | 45 | 340 | 5.99e-22 | 95.9 |
| Msa0618170 | AT5G45910.1 | 28.877 | 374 | 208 | 19 | 7 | 340 | 3 | 358 | 1.01e-21 | 95.5 |
| Msa0618170 | AT1G28590.1 | 25.745 | 369 | 237 | 15 | 1 | 341 | 1 | 360 | 1.75e-21 | 95.1 |
| Msa0618170 | AT3G62280.1 | 26.462 | 325 | 216 | 10 | 28 | 340 | 33 | 346 | 1.83e-21 | 94.7 |
| Msa0618170 | AT3G26430.1 | 27.224 | 371 | 216 | 15 | 12 | 342 | 5 | 361 | 3.10e-21 | 94.4 |
| Msa0618170 | AT1G28670.1 | 26.935 | 323 | 205 | 13 | 35 | 334 | 39 | 353 | 4.55e-21 | 94.0 |
| Msa0618170 | AT1G28660.2 | 27.596 | 337 | 197 | 15 | 35 | 341 | 39 | 358 | 6.89e-21 | 93.2 |
| Msa0618170 | AT1G28610.2 | 25.549 | 364 | 236 | 14 | 1 | 340 | 1 | 353 | 7.23e-21 | 93.2 |
| Msa0618170 | AT2G27360.1 | 25.758 | 330 | 214 | 14 | 35 | 341 | 37 | 358 | 8.78e-21 | 93.2 |
| Msa0618170 | AT1G54790.2 | 24.250 | 400 | 232 | 13 | 7 | 347 | 3 | 390 | 1.95e-19 | 89.4 |
| Msa0618170 | AT3G09930.2 | 25.705 | 319 | 199 | 13 | 33 | 335 | 41 | 337 | 4.78e-19 | 87.8 |
| Msa0618170 | AT3G09930.1 | 25.705 | 319 | 199 | 13 | 33 | 335 | 41 | 337 | 4.78e-19 | 87.8 |
| Msa0618170 | AT4G01130.2 | 25.168 | 298 | 196 | 10 | 10 | 290 | 11 | 298 | 1.64e-18 | 85.9 |
| Msa0618170 | AT1G54020.1 | 23.759 | 282 | 188 | 8 | 84 | 360 | 1 | 260 | 6.06e-17 | 80.5 |
| Msa0618170 | AT1G54020.5 | 23.759 | 282 | 188 | 8 | 84 | 360 | 1 | 260 | 6.06e-17 | 80.5 |
| Msa0618170 | AT1G54020.3 | 23.759 | 282 | 188 | 8 | 84 | 360 | 1 | 260 | 6.06e-17 | 80.5 |
| Msa0618170 | AT1G56670.2 | 24.407 | 295 | 199 | 7 | 7 | 290 | 16 | 297 | 7.66e-17 | 80.5 |
| Msa0618170 | AT5G03600.1 | 24.611 | 321 | 201 | 13 | 28 | 335 | 11 | 303 | 8.52e-16 | 77.8 |
| Msa0618170 | AT5G03600.2 | 24.611 | 321 | 201 | 13 | 28 | 335 | 46 | 338 | 9.12e-16 | 78.2 |
| Msa0618170 | AT1G54030.2 | 27.426 | 237 | 146 | 8 | 33 | 265 | 54 | 268 | 1.04e-15 | 77.4 |
| Msa0618170 | AT1G54020.4 | 25.481 | 208 | 148 | 4 | 155 | 360 | 9 | 211 | 1.89e-15 | 75.5 |
| Msa0618170 | AT4G01130.3 | 24.873 | 197 | 124 | 5 | 158 | 336 | 81 | 271 | 7.70e-15 | 74.7 |
| Msa0618170 | AT1G28600.2 | 28.889 | 180 | 114 | 6 | 1 | 170 | 1 | 176 | 1.30e-12 | 67.0 |
| Msa0618170 | AT3G14210.2 | 24.651 | 215 | 148 | 6 | 154 | 360 | 20 | 228 | 2.78e-12 | 66.6 |
| Msa0618170 | AT2G36325.1 | 23.457 | 324 | 197 | 14 | 33 | 335 | 49 | 342 | 6.77e-12 | 66.6 |
Find 90 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTTGCTGTTGAATATT+TGG | 0.149733 | 4_2:-69065947 | None:intergenic |
| CTCCTTGTAGCCAATATATT+TGG | 0.164654 | 4_2:-69065882 | None:intergenic |
| TTGGAATGTGTTATTTCTTT+TGG | 0.168591 | 4_2:+69066459 | Msa0618170:three_prime_UTR |
| GTTCCTTGTTACTTCATATT+TGG | 0.188601 | 4_2:+69064019 | Msa0618170:CDS |
| CTTCATATTTGGTGATTCTT+TGG | 0.189419 | 4_2:+69064030 | Msa0618170:CDS |
| GCAAGGAAAATGGTACTATT+TGG | 0.193855 | 4_2:+69065837 | Msa0618170:CDS |
| CAACAATGGTCTTCAATCTT+TGG | 0.266111 | 4_2:+69064066 | Msa0618170:CDS |
| GTTATCTATGTAAATTCTTA+TGG | 0.274377 | 4_2:+69066014 | Msa0618170:CDS |
| CTTAGAACTCTTTATAATAA+TGG | 0.282837 | 4_2:+69065813 | Msa0618170:CDS |
| ATAAGCAACCCTTCAGCTTA+TGG | 0.283201 | 4_2:+69066053 | Msa0618170:CDS |
| ACTACCATAGTTAATGTTCT+TGG | 0.287184 | 4_2:+69066440 | Msa0618170:three_prime_UTR |
| CATAAACATGTTTGCATTGT+TGG | 0.293332 | 4_2:+69063952 | Msa0618170:CDS |
| ACAGAAGAGAGTATTTGTTT+TGG | 0.298948 | 4_2:+69066262 | Msa0618170:CDS |
| GGCTAGAAGGGTAGATAGAT+AGG | 0.300404 | 4_2:-69063886 | None:intergenic |
| AGAGCTGATTACTTTCCTTA+TGG | 0.305355 | 4_2:+69064091 | Msa0618170:CDS |
| CTATTTGGGATTGGTCAAAT+AGG | 0.314934 | 4_2:+69065852 | Msa0618170:CDS |
| AGCAAGTGTATTTACTCAAT+TGG | 0.316742 | 4_2:+69065675 | Msa0618170:CDS |
| ATAATTGACTCCTTTGAGTA+TGG | 0.322702 | 4_2:-69065422 | None:intergenic |
| CAAGGAAAATGGTACTATTT+GGG | 0.330075 | 4_2:+69065838 | Msa0618170:CDS |
| TCCTTGTAGCCAATATATTT+GGG | 0.330974 | 4_2:-69065881 | None:intergenic |
| TAATAATGGAGCAAGGAAAA+TGG | 0.350040 | 4_2:+69065827 | Msa0618170:CDS |
| TCCACACATGTTACGCCATC+CGG | 0.350778 | 4_2:-69065906 | None:intergenic |
| TTGTGCTTGGTTTGTTGAGT+GGG | 0.361594 | 4_2:+69063978 | Msa0618170:CDS |
| GGTGGTGAAGAGTGGCTAGA+AGG | 0.364704 | 4_2:-69063899 | None:intergenic |
| GGTGATTCTTTGGTGGATAA+TGG | 0.370098 | 4_2:+69064040 | Msa0618170:CDS |
| CCTTATGGAATTGACTTTGG+TGG | 0.378784 | 4_2:+69064106 | Msa0618170:CDS |
| AATTTAACAGCTGAGCTATT+GGG | 0.380127 | 4_2:+69065355 | Msa0618170:intron |
| CTTGGTTTGTTGAGTGGGGT+TGG | 0.398393 | 4_2:+69063983 | Msa0618170:CDS |
| AGGCTGCAGCCCAAATATAT+TGG | 0.400606 | 4_2:+69065872 | Msa0618170:CDS |
| TTTCCTTATGGAATTGACTT+TGG | 0.406222 | 4_2:+69064103 | Msa0618170:CDS |
| GCACTTGGGCACTAAAACTA+AGG | 0.408185 | 4_2:-69065581 | None:intergenic |
| AAATTTAACAGCTGAGCTAT+TGG | 0.411633 | 4_2:+69065354 | Msa0618170:intron |
| ATTGACTTTGGTGGACCTAC+TGG | 0.426568 | 4_2:+69064115 | Msa0618170:CDS |
| GTGTATTTACTCAATTGGAT+TGG | 0.426674 | 4_2:+69065680 | Msa0618170:CDS |
| GCTAAGTGGCTAATATCAAT+AGG | 0.428046 | 4_2:-69066366 | None:intergenic |
| GCATTGTTGGTTGTTGTGCT+TGG | 0.430718 | 4_2:+69063965 | Msa0618170:CDS |
| TGCTTTGGTAATTCTGCACT+TGG | 0.435688 | 4_2:-69065596 | None:intergenic |
| TGTATTTACTCAATTGGATT+GGG | 0.440503 | 4_2:+69065681 | Msa0618170:CDS |
| CTACTTGTGACACAGTGCTT+TGG | 0.442326 | 4_2:-69065611 | None:intergenic |
| AAGAGTGTAAATATATATAG+TGG | 0.457369 | 4_2:-69063826 | None:intergenic |
| CATTCCAAGAACATTAACTA+TGG | 0.459879 | 4_2:-69066444 | None:intergenic |
| AATTATGCTTCTGCAGCAGC+TGG | 0.464686 | 4_2:+69065439 | Msa0618170:CDS |
| CATATTTGGTGATTCTTTGG+TGG | 0.471586 | 4_2:+69064033 | Msa0618170:CDS |
| GTGGTGAAGAGTGGCTAGAA+GGG | 0.475155 | 4_2:-69063898 | None:intergenic |
| AAAACCACTGTTGATGCAAT+TGG | 0.478051 | 4_2:+69064154 | Msa0618170:CDS |
| AGATCATCAGCATACTCATC+TGG | 0.478200 | 4_2:-69065768 | None:intergenic |
| GCTGGAATTAGAGAGGAAAC+TGG | 0.486290 | 4_2:+69065457 | Msa0618170:CDS |
| GCTAGAAGGGTAGATAGATA+GGG | 0.489285 | 4_2:-69063885 | None:intergenic |
| AAAATGGTACTATTTGGGAT+TGG | 0.509987 | 4_2:+69065843 | Msa0618170:CDS |
| CCACCAAAGTCAATTCCATA+AGG | 0.510808 | 4_2:-69064106 | None:intergenic |
| TCAATAGGATAAGCATCCTC+TGG | 0.512358 | 4_2:-69066351 | None:intergenic |
| ATGCCTCAATTCTATAGCAC+AGG | 0.522685 | 4_2:+69065732 | Msa0618170:CDS |
| ATTAAATTACCATAAGCTGA+AGG | 0.527446 | 4_2:-69066062 | None:intergenic |
| ATGAAGTAACAAGGAACTTG+TGG | 0.528070 | 4_2:-69064013 | None:intergenic |
| GTTGTGCTTGGTTTGTTGAG+TGG | 0.531237 | 4_2:+69063977 | Msa0618170:CDS |
| GCCCAAATATATTGGCTACA+AGG | 0.535288 | 4_2:+69065880 | Msa0618170:CDS |
| TTCTCACATGGTGTTTGCAA+TGG | 0.539683 | 4_2:-69066240 | None:intergenic |
| TCACAAGTAGTGAATATACT+AGG | 0.545333 | 4_2:+69065624 | Msa0618170:CDS |
| TTAAATTACCATAAGCTGAA+GGG | 0.562936 | 4_2:-69066061 | None:intergenic |
| TGTGCTTGGTTTGTTGAGTG+GGG | 0.564540 | 4_2:+69063979 | Msa0618170:CDS |
| CCACACATGTTACGCCATCC+GGG | 0.567099 | 4_2:-69065905 | None:intergenic |
| ATCATCACTAGCAGATGCAT+AGG | 0.567991 | 4_2:-69065398 | None:intergenic |
| TATATTGGCTACAAGGAGCC+CGG | 0.568733 | 4_2:+69065887 | Msa0618170:CDS |
| GCTTTGGTAATTCTGCACTT+GGG | 0.580136 | 4_2:-69065595 | None:intergenic |
| CCCGGATGGCGTAACATGTG+TGG | 0.590019 | 4_2:+69065905 | Msa0618170:CDS |
| AGTGATGATGCCATACTCAA+AGG | 0.595556 | 4_2:+69065412 | Msa0618170:CDS |
| AATGCTGGATGCTGTGGAGT+AGG | 0.598356 | 4_2:+69066189 | Msa0618170:CDS |
| GTTACAAATGCTGGATGCTG+TGG | 0.599550 | 4_2:+69066183 | Msa0618170:CDS |
| TAGATCAGAGCTGAGCTAAG+TGG | 0.600707 | 4_2:-69066380 | None:intergenic |
| CCATTGGAAAACCTTCCAGT+AGG | 0.600738 | 4_2:-69064130 | None:intergenic |
| TATCAGCATGGTCTTGCTAG+TGG | 0.602418 | 4_2:+69066401 | Msa0618170:three_prime_UTR |
| GTGGATAATGGTAACAACAA+TGG | 0.606722 | 4_2:+69064052 | Msa0618170:CDS |
| ACTTTGGTGGACCTACTGGA+AGG | 0.612651 | 4_2:+69064119 | Msa0618170:CDS |
| TACTCTCTTCTGTTCTCACA+TGG | 0.612707 | 4_2:-69066252 | None:intergenic |
| TCATCACTAGCAGATGCATA+GGG | 0.614085 | 4_2:-69065397 | None:intergenic |
| CTCTTTATAATAATGGAGCA+AGG | 0.616381 | 4_2:+69065820 | Msa0618170:CDS |
| ACTACATTTCCAGCTTCAGT+CGG | 0.632841 | 4_2:-69066297 | None:intergenic |
| TGCAGCAGCTGGAATTAGAG+AGG | 0.635095 | 4_2:+69065450 | Msa0618170:CDS |
| CTGGATGCTGTGGAGTAGGA+AGG | 0.636608 | 4_2:+69066193 | Msa0618170:CDS |
| TTGGCTACAAGGAGCCCGGA+TGG | 0.639850 | 4_2:+69065891 | Msa0618170:CDS |
| CTTACCAATTGCATCAACAG+TGG | 0.640720 | 4_2:-69064158 | None:intergenic |
| ATATTCAACAGCAAATTGAA+AGG | 0.643543 | 4_2:+69065951 | Msa0618170:CDS |
| GTGCCTGTGCTATAGAATTG+AGG | 0.644555 | 4_2:-69065735 | None:intergenic |
| TCACTAGCAGATGCATAGGG+TGG | 0.661781 | 4_2:-69065394 | None:intergenic |
| TTACAGTGCTCAATCTCCAG+AGG | 0.662313 | 4_2:+69066335 | Msa0618170:CDS |
| AGTGAATATACTAGGAACTG+AGG | 0.666217 | 4_2:+69065632 | Msa0618170:CDS |
| TCACCAAATATGAAGTAACA+AGG | 0.672914 | 4_2:-69064022 | None:intergenic |
| TCAGCTCTGATCTATCAGCA+TGG | 0.682994 | 4_2:+69066389 | Msa0618170:exon |
| GAATTAGAGAGGAAACTGGA+CGG | 0.701371 | 4_2:+69065461 | Msa0618170:CDS |
| TGTGGAGTAGGAAGGAACAA+TGG | 0.715337 | 4_2:+69066201 | Msa0618170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTTTTTTTTTTTTTG+AGG | + | chr4_2:69065254-69065273 | Msa0618170:intron | 10.0% |
| !! | TAAAATAAAAGAAAAGCAAA+GGG | - | chr4_2:69064185-69064204 | None:intergenic | 15.0% |
| !! | ATAAAATAAAAGAAAAGCAA+AGG | - | chr4_2:69064186-69064205 | None:intergenic | 15.0% |
| !!! | TTAAATTTGTTATATTTCAC+TGG | + | chr4_2:69064362-69064381 | Msa0618170:intron | 15.0% |
| !!! | ATGAAATTCAAATCTTTTTT+AGG | + | chr4_2:69064568-69064587 | Msa0618170:intron | 15.0% |
| !! | AAGATCAATTAAAACAATTA+AGG | + | chr4_2:69064837-69064856 | Msa0618170:intron | 15.0% |
| !! | AGATCAATTAAAACAATTAA+GGG | + | chr4_2:69064838-69064857 | Msa0618170:intron | 15.0% |
| !!! | TAAGTATTTTATGAAAAGTT+GGG | + | chr4_2:69064907-69064926 | Msa0618170:intron | 15.0% |
| !! | ATATTATGATTTCACTATTA+AGG | - | chr4_2:69064960-69064979 | None:intergenic | 15.0% |
| !!! | AATATGTTCTAAATATTTGT+AGG | + | chr4_2:69065551-69065570 | Msa0618170:intron | 15.0% |
| !!! | ATATGTTCTAAATATTTGTA+GGG | + | chr4_2:69065552-69065571 | Msa0618170:intron | 15.0% |
| !! | AATTAAATTTGATGTCAATA+AGG | - | chr4_2:69066150-69066169 | None:intergenic | 15.0% |
| !!! | AAGAGTGTAAATATATATAG+TGG | - | chr4_2:69063829-69063848 | None:intergenic | 20.0% |
| !!! | AATTCAAATCTTTTTTAGGA+TGG | + | chr4_2:69064572-69064591 | Msa0618170:intron | 20.0% |
| !! | AATGGTCAAAATTATAGAAA+TGG | - | chr4_2:69064730-69064749 | None:intergenic | 20.0% |
| !!! | GTAAGTATTTTATGAAAAGT+TGG | + | chr4_2:69064906-69064925 | Msa0618170:intron | 20.0% |
| !!! | ATTTAATACAGTTTTGACAA+AGG | + | chr4_2:69065116-69065135 | Msa0618170:intron | 20.0% |
| !! | CTTAGAACTCTTTATAATAA+TGG | + | chr4_2:69065813-69065832 | Msa0618170:CDS | 20.0% |
| !! | GTTATCTATGTAAATTCTTA+TGG | + | chr4_2:69066014-69066033 | Msa0618170:CDS | 20.0% |
| !!! | TGACATCAAATTTAATTTTC+AGG | + | chr4_2:69066153-69066172 | Msa0618170:intron | 20.0% |
| !! | TCTACCAGTATAATTTTAGA+CGG | - | chr4_2:69064325-69064344 | None:intergenic | 25.0% |
| ! | TTCTAGGTAGTTAAAATAAC+TGG | - | chr4_2:69064492-69064511 | None:intergenic | 25.0% |
| ! | TTGAAGATTTGGCTAAAATA+GGG | - | chr4_2:69064669-69064688 | None:intergenic | 25.0% |
| ! | ATTGAAGATTTGGCTAAAAT+AGG | - | chr4_2:69064670-69064689 | None:intergenic | 25.0% |
| !! | TTTAGCCAAATCTTCAATTT+TGG | + | chr4_2:69064672-69064691 | Msa0618170:intron | 25.0% |
| ! | TAGATCAAAATGATGTCTTA+TGG | + | chr4_2:69064773-69064792 | Msa0618170:intron | 25.0% |
| ! | AGATCAAAATGATGTCTTAT+GGG | + | chr4_2:69064774-69064793 | Msa0618170:intron | 25.0% |
| ! | AAACAAACACAAGATTTAAG+TGG | + | chr4_2:69065211-69065230 | Msa0618170:intron | 25.0% |
| ! | AACAAACACAAGATTTAAGT+GGG | + | chr4_2:69065212-69065231 | Msa0618170:intron | 25.0% |
| ! | TGTATTTACTCAATTGGATT+GGG | + | chr4_2:69065681-69065700 | Msa0618170:CDS | 25.0% |
| !!! | TCAATTTGCTGTTGAATATT+TGG | - | chr4_2:69065950-69065969 | None:intergenic | 25.0% |
| ! | ATATTCAACAGCAAATTGAA+AGG | + | chr4_2:69065951-69065970 | Msa0618170:CDS | 25.0% |
| !! | ACATAGATAACTTTTGAATC+AGG | - | chr4_2:69066005-69066024 | None:intergenic | 25.0% |
| ! | TTAAATTACCATAAGCTGAA+GGG | - | chr4_2:69066064-69066083 | None:intergenic | 25.0% |
| ! | ATTAAATTACCATAAGCTGA+AGG | - | chr4_2:69066065-69066084 | None:intergenic | 25.0% |
| ! | ATGTGACTAGAAAAATGTTA+AGG | - | chr4_2:69066094-69066113 | None:intergenic | 25.0% |
| !!! | TTGGAATGTGTTATTTCTTT+TGG | + | chr4_2:69066459-69066478 | Msa0618170:three_prime_UTR | 25.0% |
| AATGCCATTGAAGCAAAAAT+TGG | - | chr4_2:69063923-69063942 | None:intergenic | 30.0% | |
| CATAAACATGTTTGCATTGT+TGG | + | chr4_2:69063952-69063971 | Msa0618170:CDS | 30.0% | |
| ! | GTTCCTTGTTACTTCATATT+TGG | + | chr4_2:69064019-69064038 | Msa0618170:CDS | 30.0% |
| TCACCAAATATGAAGTAACA+AGG | - | chr4_2:69064025-69064044 | None:intergenic | 30.0% | |
| ! | CTTCATATTTGGTGATTCTT+TGG | + | chr4_2:69064030-69064049 | Msa0618170:CDS | 30.0% |
| ! | TTTCCTTATGGAATTGACTT+TGG | + | chr4_2:69064103-69064122 | Msa0618170:CDS | 30.0% |
| GCATGCACTTGTATATTATA+TGG | + | chr4_2:69064229-69064248 | Msa0618170:intron | 30.0% | |
| ! | CTAACCGTCTAAAATTATAC+TGG | + | chr4_2:69064318-69064337 | Msa0618170:intron | 30.0% |
| CTAAAATTATACTGGTAGAG+TGG | + | chr4_2:69064326-69064345 | Msa0618170:intron | 30.0% | |
| AGGTAGTTAAAATAACTGGA+GGG | - | chr4_2:69064488-69064507 | None:intergenic | 30.0% | |
| TAGGTAGTTAAAATAACTGG+AGG | - | chr4_2:69064489-69064508 | None:intergenic | 30.0% | |
| ATTTCATGGATCATGTTTCT+AGG | - | chr4_2:69064508-69064527 | None:intergenic | 30.0% | |
| AAGCGTTTGAATTTGTAACA+GGG | + | chr4_2:69064545-69064564 | Msa0618170:intron | 30.0% | |
| !!! | TCAAATCTTTTTTAGGATGG+TGG | + | chr4_2:69064575-69064594 | Msa0618170:intron | 30.0% |
| CCTATTACTATCAATTAGAG+TGG | - | chr4_2:69064627-69064646 | None:intergenic | 30.0% | |
| ! | CCACTCTAATTGATAGTAAT+AGG | + | chr4_2:69064624-69064643 | Msa0618170:intron | 30.0% |
| ATTGCCAATTAGAAATAGAG+TGG | - | chr4_2:69064698-69064717 | None:intergenic | 30.0% | |
| TTGTCACATCATCAATTGAA+TGG | - | chr4_2:69064748-69064767 | None:intergenic | 30.0% | |
| GATCAAAATGATGTCTTATG+GGG | + | chr4_2:69064775-69064794 | Msa0618170:intron | 30.0% | |
| ! | ATCAGTACTTCTGGTAATTT+TGG | - | chr4_2:69065182-69065201 | None:intergenic | 30.0% |
| !! | AATTACCAGAAGTACTGATT+CGG | + | chr4_2:69065183-69065202 | Msa0618170:intron | 30.0% |
| AAATTTAACAGCTGAGCTAT+TGG | + | chr4_2:69065354-69065373 | Msa0618170:intron | 30.0% | |
| AATTTAACAGCTGAGCTATT+GGG | + | chr4_2:69065355-69065374 | Msa0618170:intron | 30.0% | |
| ! | ATAATTGACTCCTTTGAGTA+TGG | - | chr4_2:69065425-69065444 | None:intergenic | 30.0% |
| TCACAAGTAGTGAATATACT+AGG | + | chr4_2:69065624-69065643 | Msa0618170:CDS | 30.0% | |
| AGCAAGTGTATTTACTCAAT+TGG | + | chr4_2:69065675-69065694 | Msa0618170:CDS | 30.0% | |
| GTGTATTTACTCAATTGGAT+TGG | + | chr4_2:69065680-69065699 | Msa0618170:CDS | 30.0% | |
| ! | CTCTTTATAATAATGGAGCA+AGG | + | chr4_2:69065820-69065839 | Msa0618170:CDS | 30.0% |
| ! | TAATAATGGAGCAAGGAAAA+TGG | + | chr4_2:69065827-69065846 | Msa0618170:CDS | 30.0% |
| CAAGGAAAATGGTACTATTT+GGG | + | chr4_2:69065838-69065857 | Msa0618170:CDS | 30.0% | |
| ! | AAAATGGTACTATTTGGGAT+TGG | + | chr4_2:69065843-69065862 | Msa0618170:CDS | 30.0% |
| TCCTTGTAGCCAATATATTT+GGG | - | chr4_2:69065884-69065903 | None:intergenic | 30.0% | |
| !!! | ACAGAAGAGAGTATTTGTTT+TGG | + | chr4_2:69066262-69066281 | Msa0618170:CDS | 30.0% |
| !!! | CAGAAGAGAGTATTTGTTTT+GGG | + | chr4_2:69066263-69066282 | Msa0618170:CDS | 30.0% |
| ACTACCATAGTTAATGTTCT+TGG | + | chr4_2:69066440-69066459 | Msa0618170:three_prime_UTR | 30.0% | |
| CATTCCAAGAACATTAACTA+TGG | - | chr4_2:69066447-69066466 | None:intergenic | 30.0% | |
| ! | ACCACCAATTTTTGCTTCAA+TGG | + | chr4_2:69063916-69063935 | Msa0618170:exon | 35.0% |
| ! | TTTTGCTTCAATGGCATTTG+AGG | + | chr4_2:69063925-69063944 | Msa0618170:exon | 35.0% |
| ATGAAGTAACAAGGAACTTG+TGG | - | chr4_2:69064016-69064035 | None:intergenic | 35.0% | |
| ! | CATATTTGGTGATTCTTTGG+TGG | + | chr4_2:69064033-69064052 | Msa0618170:CDS | 35.0% |
| ! | GTGGATAATGGTAACAACAA+TGG | + | chr4_2:69064052-69064071 | Msa0618170:CDS | 35.0% |
| CAACAATGGTCTTCAATCTT+TGG | + | chr4_2:69064066-69064085 | Msa0618170:CDS | 35.0% | |
| AGAGCTGATTACTTTCCTTA+TGG | + | chr4_2:69064091-69064110 | Msa0618170:CDS | 35.0% | |
| ! | ATCAACAGTGGTTTTTCCAT+TGG | - | chr4_2:69064149-69064168 | None:intergenic | 35.0% |
| AAAACCACTGTTGATGCAAT+TGG | + | chr4_2:69064154-69064173 | Msa0618170:CDS | 35.0% | |
| CAAGCGTTTGAATTTGTAAC+AGG | + | chr4_2:69064544-69064563 | Msa0618170:intron | 35.0% | |
| AGTGGCCAAAATTGAAGATT+TGG | - | chr4_2:69064680-69064699 | None:intergenic | 35.0% | |
| !! | TTGGCCACTCTATTTCTAAT+TGG | + | chr4_2:69064691-69064710 | Msa0618170:intron | 35.0% |
| AAAAAAACCACCTAGAAGCA+TGG | + | chr4_2:69064933-69064952 | Msa0618170:intron | 35.0% | |
| ! | ATGGAATGGAATTTAAAGCC+CGG | - | chr4_2:69065057-69065076 | None:intergenic | 35.0% |
| ! | CTGGTAATTTTGGATCTCTT+TGG | - | chr4_2:69065172-69065191 | None:intergenic | 35.0% |
| ! | TTTTACCGAATCAGTACTTC+TGG | - | chr4_2:69065191-69065210 | None:intergenic | 35.0% |
| TACTGTTGTCTAACTAACTG+TGG | + | chr4_2:69065331-69065350 | Msa0618170:intron | 35.0% | |
| AGTGAATATACTAGGAACTG+AGG | + | chr4_2:69065632-69065651 | Msa0618170:CDS | 35.0% | |
| GCAAGGAAAATGGTACTATT+TGG | + | chr4_2:69065837-69065856 | Msa0618170:CDS | 35.0% | |
| !! | CTATTTGGGATTGGTCAAAT+AGG | + | chr4_2:69065852-69065871 | Msa0618170:CDS | 35.0% |
| CTCCTTGTAGCCAATATATT+TGG | - | chr4_2:69065885-69065904 | None:intergenic | 35.0% | |
| ! | TAACTTTTGAATCAGGAAGC+TGG | - | chr4_2:69065998-69066017 | None:intergenic | 35.0% |
| !! | GGTTTTAGTGTTACAAATGC+TGG | + | chr4_2:69066174-69066193 | Msa0618170:intron | 35.0% |
| GCTAAGTGGCTAATATCAAT+AGG | - | chr4_2:69066369-69066388 | None:intergenic | 35.0% | |
| GCTAGAAGGGTAGATAGATA+GGG | - | chr4_2:69063888-69063907 | None:intergenic | 40.0% | |
| !! | CAAAAATTGGTGGTGAAGAG+TGG | - | chr4_2:69063910-69063929 | None:intergenic | 40.0% |
| GCCATTGAAGCAAAAATTGG+TGG | - | chr4_2:69063920-69063939 | None:intergenic | 40.0% | |
| !! | TTGTGCTTGGTTTGTTGAGT+GGG | + | chr4_2:69063978-69063997 | Msa0618170:CDS | 40.0% |
| ! | GGTGATTCTTTGGTGGATAA+TGG | + | chr4_2:69064040-69064059 | Msa0618170:CDS | 40.0% |
| CCACCAAAGTCAATTCCATA+AGG | - | chr4_2:69064109-69064128 | None:intergenic | 40.0% | |
| ! | CCTTATGGAATTGACTTTGG+TGG | + | chr4_2:69064106-69064125 | Msa0618170:CDS | 40.0% |
| CTTACCAATTGCATCAACAG+TGG | - | chr4_2:69064161-69064180 | None:intergenic | 40.0% | |
| ATAGAGCTGCTGACATTTCA+TGG | - | chr4_2:69064522-69064541 | None:intergenic | 40.0% | |
| !! | TAAAGTGCTTAAAGAGTGCC+CGG | - | chr4_2:69064882-69064901 | None:intergenic | 40.0% |
| CTATTAAGGACCATGCTTCT+AGG | - | chr4_2:69064946-69064965 | None:intergenic | 40.0% | |
| CAAGATTCACACTCATCAAG+AGG | - | chr4_2:69065031-69065050 | None:intergenic | 40.0% | |
| ATGAGTGTGAATCTTGTGAC+CGG | + | chr4_2:69065035-69065054 | Msa0618170:intron | 40.0% | |
| TCCATTCCATTCCATTCACA+TGG | + | chr4_2:69065067-69065086 | Msa0618170:intron | 40.0% | |
| ACCATGTGAATGGAATGGAA+TGG | - | chr4_2:69065071-69065090 | None:intergenic | 40.0% | |
| ACAGAACCATGTGAATGGAA+TGG | - | chr4_2:69065076-69065095 | None:intergenic | 40.0% | |
| ! | TCCATTCACATGGTTCTGTT+TGG | + | chr4_2:69065077-69065096 | Msa0618170:intron | 40.0% |
| ACCAAACAGAACCATGTGAA+TGG | - | chr4_2:69065081-69065100 | None:intergenic | 40.0% | |
| TCATCACTAGCAGATGCATA+GGG | - | chr4_2:69065400-69065419 | None:intergenic | 40.0% | |
| ATCATCACTAGCAGATGCAT+AGG | - | chr4_2:69065401-69065420 | None:intergenic | 40.0% | |
| ! | AGTGATGATGCCATACTCAA+AGG | + | chr4_2:69065412-69065431 | Msa0618170:CDS | 40.0% |
| GAATTAGAGAGGAAACTGGA+CGG | + | chr4_2:69065461-69065480 | Msa0618170:CDS | 40.0% | |
| ! | GCTTTGGTAATTCTGCACTT+GGG | - | chr4_2:69065598-69065617 | None:intergenic | 40.0% |
| ! | TGCTTTGGTAATTCTGCACT+TGG | - | chr4_2:69065599-69065618 | None:intergenic | 40.0% |
| ATGCCTCAATTCTATAGCAC+AGG | + | chr4_2:69065732-69065751 | Msa0618170:CDS | 40.0% | |
| AGATCATCAGCATACTCATC+TGG | - | chr4_2:69065771-69065790 | None:intergenic | 40.0% | |
| ! | GCCCAAATATATTGGCTACA+AGG | + | chr4_2:69065880-69065899 | Msa0618170:CDS | 40.0% |
| ATAAGCAACCCTTCAGCTTA+TGG | + | chr4_2:69066053-69066072 | Msa0618170:CDS | 40.0% | |
| TTCTCACATGGTGTTTGCAA+TGG | - | chr4_2:69066243-69066262 | None:intergenic | 40.0% | |
| TACTCTCTTCTGTTCTCACA+TGG | - | chr4_2:69066255-69066274 | None:intergenic | 40.0% | |
| ACTACATTTCCAGCTTCAGT+CGG | - | chr4_2:69066300-69066319 | None:intergenic | 40.0% | |
| TCAATAGGATAAGCATCCTC+TGG | - | chr4_2:69066354-69066373 | None:intergenic | 40.0% | |
| GGCTAGAAGGGTAGATAGAT+AGG | - | chr4_2:69063889-69063908 | None:intergenic | 45.0% | |
| ! | GCATTGTTGGTTGTTGTGCT+TGG | + | chr4_2:69063965-69063984 | Msa0618170:CDS | 45.0% |
| !! | GTTGTGCTTGGTTTGTTGAG+TGG | + | chr4_2:69063977-69063996 | Msa0618170:CDS | 45.0% |
| !! | TGTGCTTGGTTTGTTGAGTG+GGG | + | chr4_2:69063979-69063998 | Msa0618170:CDS | 45.0% |
| ! | ATTGACTTTGGTGGACCTAC+TGG | + | chr4_2:69064115-69064134 | Msa0618170:CDS | 45.0% |
| CCATTGGAAAACCTTCCAGT+AGG | - | chr4_2:69064133-69064152 | None:intergenic | 45.0% | |
| ! | CCTACTGGAAGGTTTTCCAA+TGG | + | chr4_2:69064130-69064149 | Msa0618170:CDS | 45.0% |
| !! | AAAGTGCTTAAAGAGTGCCC+GGG | - | chr4_2:69064881-69064900 | None:intergenic | 45.0% |
| TTAAGGACCATGCTTCTAGG+TGG | - | chr4_2:69064943-69064962 | None:intergenic | 45.0% | |
| TGAGTGTGAATCTTGTGACC+GGG | + | chr4_2:69065036-69065055 | Msa0618170:intron | 45.0% | |
| AATTATGCTTCTGCAGCAGC+TGG | + | chr4_2:69065439-69065458 | Msa0618170:CDS | 45.0% | |
| GCTGGAATTAGAGAGGAAAC+TGG | + | chr4_2:69065457-69065476 | Msa0618170:CDS | 45.0% | |
| GCACTTGGGCACTAAAACTA+AGG | - | chr4_2:69065584-69065603 | None:intergenic | 45.0% | |
| CTACTTGTGACACAGTGCTT+TGG | - | chr4_2:69065614-69065633 | None:intergenic | 45.0% | |
| GTGCCTGTGCTATAGAATTG+AGG | - | chr4_2:69065738-69065757 | None:intergenic | 45.0% | |
| AGGCTGCAGCCCAAATATAT+TGG | + | chr4_2:69065872-69065891 | Msa0618170:CDS | 45.0% | |
| ! | TATATTGGCTACAAGGAGCC+CGG | + | chr4_2:69065887-69065906 | Msa0618170:CDS | 45.0% |
| GTTACAAATGCTGGATGCTG+TGG | + | chr4_2:69066183-69066202 | Msa0618170:CDS | 45.0% | |
| TGTGGAGTAGGAAGGAACAA+TGG | + | chr4_2:69066201-69066220 | Msa0618170:CDS | 45.0% | |
| TTACAGTGCTCAATCTCCAG+AGG | + | chr4_2:69066335-69066354 | Msa0618170:CDS | 45.0% | |
| TAGATCAGAGCTGAGCTAAG+TGG | - | chr4_2:69066383-69066402 | None:intergenic | 45.0% | |
| ! | TCAGCTCTGATCTATCAGCA+TGG | + | chr4_2:69066389-69066408 | Msa0618170:exon | 45.0% |
| ! | TATCAGCATGGTCTTGCTAG+TGG | + | chr4_2:69066401-69066420 | Msa0618170:three_prime_UTR | 45.0% |
| GTGGTGAAGAGTGGCTAGAA+GGG | - | chr4_2:69063901-69063920 | None:intergenic | 50.0% | |
| !! | CTTGGTTTGTTGAGTGGGGT+TGG | + | chr4_2:69063983-69064002 | Msa0618170:CDS | 50.0% |
| ! | ACTTTGGTGGACCTACTGGA+AGG | + | chr4_2:69064119-69064138 | Msa0618170:CDS | 50.0% |
| GAAATGTTAACGAGTGCCCC+CGG | + | chr4_2:69064860-69064879 | Msa0618170:intron | 50.0% | |
| AAATGTTAACGAGTGCCCCC+GGG | + | chr4_2:69064861-69064880 | Msa0618170:intron | 50.0% | |
| !! | AAGTGCTTAAAGAGTGCCCG+GGG | - | chr4_2:69064880-69064899 | None:intergenic | 50.0% |
| TCACTAGCAGATGCATAGGG+TGG | - | chr4_2:69065397-69065416 | None:intergenic | 50.0% | |
| TGCAGCAGCTGGAATTAGAG+AGG | + | chr4_2:69065450-69065469 | Msa0618170:CDS | 50.0% | |
| TCCACACATGTTACGCCATC+CGG | - | chr4_2:69065909-69065928 | None:intergenic | 50.0% | |
| AATGCTGGATGCTGTGGAGT+AGG | + | chr4_2:69066189-69066208 | Msa0618170:CDS | 50.0% | |
| ! | GCTTTTCATCCGACTGAAGC+TGG | + | chr4_2:69066288-69066307 | Msa0618170:CDS | 50.0% |
| GGTGGTGAAGAGTGGCTAGA+AGG | - | chr4_2:69063902-69063921 | None:intergenic | 55.0% | |
| !! | AGTGCTTAAAGAGTGCCCGG+GGG | - | chr4_2:69064879-69064898 | None:intergenic | 55.0% |
| CCACACATGTTACGCCATCC+GGG | - | chr4_2:69065908-69065927 | None:intergenic | 55.0% | |
| CTGGATGCTGTGGAGTAGGA+AGG | + | chr4_2:69066193-69066212 | Msa0618170:CDS | 55.0% | |
| TTGGCTACAAGGAGCCCGGA+TGG | + | chr4_2:69065891-69065910 | Msa0618170:CDS | 60.0% | |
| CCCGGATGGCGTAACATGTG+TGG | + | chr4_2:69065905-69065924 | Msa0618170:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 69063826 | 69066600 | 69063826 | ID=Msa0618170;Name=Msa0618170 |
| chr4_2 | mRNA | 69063826 | 69066600 | 69063826 | ID=Msa0618170-mRNA-1;Parent=Msa0618170;Name=Msa0618170-mRNA-1;_AED=0.27;_eAED=0.27;_QI=109|1|1|1|1|1|4|202|363 |
| chr4_2 | exon | 69063826 | 69064175 | 69063826 | ID=Msa0618170-mRNA-1:exon:19880;Parent=Msa0618170-mRNA-1 |
| chr4_2 | exon | 69065365 | 69065489 | 69065365 | ID=Msa0618170-mRNA-1:exon:19881;Parent=Msa0618170-mRNA-1 |
| chr4_2 | exon | 69065573 | 69066074 | 69065573 | ID=Msa0618170-mRNA-1:exon:19882;Parent=Msa0618170-mRNA-1 |
| chr4_2 | exon | 69066175 | 69066600 | 69066175 | ID=Msa0618170-mRNA-1:exon:19883;Parent=Msa0618170-mRNA-1 |
| chr4_2 | five_prime_UTR | 69063826 | 69063934 | 69063826 | ID=Msa0618170-mRNA-1:five_prime_utr;Parent=Msa0618170-mRNA-1 |
| chr4_2 | CDS | 69063935 | 69064175 | 69063935 | ID=Msa0618170-mRNA-1:cds;Parent=Msa0618170-mRNA-1 |
| chr4_2 | CDS | 69065365 | 69065489 | 69065365 | ID=Msa0618170-mRNA-1:cds;Parent=Msa0618170-mRNA-1 |
| chr4_2 | CDS | 69065573 | 69066074 | 69065573 | ID=Msa0618170-mRNA-1:cds;Parent=Msa0618170-mRNA-1 |
| chr4_2 | CDS | 69066175 | 69066398 | 69066175 | ID=Msa0618170-mRNA-1:cds;Parent=Msa0618170-mRNA-1 |
| chr4_2 | three_prime_UTR | 69066399 | 69066600 | 69066399 | ID=Msa0618170-mRNA-1:three_prime_utr;Parent=Msa0618170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
