Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0641620 | XP_024637633.1 | 97.647 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 1.83e-117 | 339 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0641620 | 0.808013 | 3.815580e-50 | -8.615850e-47 |
| Msa0004350 | Msa0641620 | 0.817864 | 2.643180e-52 | -8.615850e-47 |
| Msa0005050 | Msa0641620 | 0.818996 | 1.463895e-52 | -8.615850e-47 |
| Msa0018220 | Msa0641620 | 0.865414 | 6.010745e-65 | -8.615850e-47 |
| Msa0039490 | Msa0641620 | 0.805352 | 1.391333e-49 | -8.615850e-47 |
| Msa0043940 | Msa0641620 | 0.813039 | 3.131287e-51 | -8.615850e-47 |
| Msa0050040 | Msa0641620 | 0.807879 | 4.074428e-50 | -8.615850e-47 |
| Msa0052020 | Msa0641620 | 0.861573 | 9.328537e-64 | -8.615850e-47 |
| Msa0052460 | Msa0641620 | 0.856848 | 2.436960e-62 | -8.615850e-47 |
| Msa0053110 | Msa0641620 | 0.821594 | 3.715599e-53 | -8.615850e-47 |
| Msa0059960 | Msa0641620 | -0.814982 | 1.167311e-51 | -8.615850e-47 |
| Msa0077410 | Msa0641620 | 0.850717 | 1.417307e-60 | -8.615850e-47 |
| Msa0079770 | Msa0641620 | 0.824253 | 8.922578e-54 | -8.615850e-47 |
| Msa0092710 | Msa0641620 | 0.818505 | 1.892836e-52 | -8.615850e-47 |
| Msa0094420 | Msa0641620 | 0.809628 | 1.722493e-50 | -8.615850e-47 |
| Msa0097050 | Msa0641620 | 0.867338 | 1.472720e-65 | -8.615850e-47 |
| Msa0098440 | Msa0641620 | 0.816647 | 4.965924e-52 | -8.615850e-47 |
| Msa0100570 | Msa0641620 | 0.804843 | 1.777808e-49 | -8.615850e-47 |
| Msa0100860 | Msa0641620 | 0.801860 | 7.378162e-49 | -8.615850e-47 |
| Msa0102800 | Msa0641620 | 0.808659 | 2.778493e-50 | -8.615850e-47 |
| Msa0102990 | Msa0641620 | 0.807940 | 3.954331e-50 | -8.615850e-47 |
| Msa0603680 | Msa0641620 | 0.813816 | 2.113340e-51 | -8.615850e-47 |
| Msa0607480 | Msa0641620 | 0.800196 | 1.614049e-48 | -8.615850e-47 |
| Msa0618170 | Msa0641620 | 0.814352 | 1.609745e-51 | -8.615850e-47 |
| Msa0619330 | Msa0641620 | 0.806691 | 7.274597e-50 | -8.615850e-47 |
| Msa0621770 | Msa0641620 | 0.822749 | 2.005198e-53 | -8.615850e-47 |
| Msa0625890 | Msa0641620 | 0.802535 | 5.358052e-49 | -8.615850e-47 |
| Msa0633750 | Msa0641620 | 0.844244 | 8.524733e-59 | -8.615850e-47 |
| Msa0634270 | Msa0641620 | 0.868159 | 8.032144e-66 | -8.615850e-47 |
| Msa0640390 | Msa0641620 | 0.811207 | 7.857416e-51 | -8.615850e-47 |
| Msa0640880 | Msa0641620 | 0.801114 | 1.048781e-48 | -8.615850e-47 |
| Msa0641620 | Msa0642650 | 0.801754 | 7.754592e-49 | -8.615850e-47 |
| Msa0641620 | Msa0645050 | 0.836166 | 1.097475e-56 | -8.615850e-47 |
| Msa0641620 | Msa0648180 | 0.816820 | 4.540743e-52 | -8.615850e-47 |
| Msa0641620 | Msa0648270 | 0.803628 | 3.183016e-49 | -8.615850e-47 |
| Msa0641620 | Msa0665910 | -0.803258 | 3.797875e-49 | -8.615850e-47 |
| Msa0641620 | Msa0667970 | 0.803407 | 3.538359e-49 | -8.615850e-47 |
| Msa0641620 | Msa0669840 | 0.807353 | 5.269985e-50 | -8.615850e-47 |
| Msa0641620 | Msa0672110 | 0.826516 | 2.599766e-54 | -8.615850e-47 |
| Msa0641620 | Msa0678890 | 0.881559 | 2.170624e-70 | -8.615850e-47 |
| Msa0641620 | Msa0680150 | 0.902306 | 1.109086e-78 | -8.615850e-47 |
| Msa0641620 | Msa0681890 | 0.812490 | 4.129012e-51 | -8.615850e-47 |
| Msa0641620 | Msa0682400 | 0.813088 | 3.055127e-51 | -8.615850e-47 |
| Msa0641620 | Msa0684530 | 0.806775 | 6.983361e-50 | -8.615850e-47 |
| Msa0641620 | Msa0685690 | 0.808941 | 2.418420e-50 | -8.615850e-47 |
| Msa0641620 | Msa0688540 | 0.801603 | 8.328213e-49 | -8.615850e-47 |
| Msa0641620 | Msa0691160 | 0.852443 | 4.599831e-61 | -8.615850e-47 |
| Msa0641620 | Msa0700850 | 0.800831 | 1.198321e-48 | -8.615850e-47 |
| Msa0641620 | Msa0700910 | 0.826289 | 2.944079e-54 | -8.615850e-47 |
| Msa0641620 | Msa0701960 | 0.823453 | 1.374187e-53 | -8.615850e-47 |
| Msa0641620 | Msa0703720 | 0.809483 | 1.850955e-50 | -8.615850e-47 |
| Msa0641620 | Msa0703760 | 0.816413 | 5.602385e-52 | -8.615850e-47 |
| Msa0641620 | Msa0709480 | 0.803496 | 3.391254e-49 | -8.615850e-47 |
| Msa0641620 | Msa0716790 | 0.804148 | 2.482507e-49 | -8.615850e-47 |
| Msa0641620 | Msa0720040 | 0.804655 | 1.946474e-49 | -8.615850e-47 |
| Msa0641620 | Msa0720270 | 0.834926 | 2.259380e-56 | -8.615850e-47 |
| Msa0641620 | Msa0722940 | 0.881742 | 1.863246e-70 | -8.615850e-47 |
| Msa0641620 | Msa0723150 | 0.886896 | 2.294119e-72 | -8.615850e-47 |
| Msa0641620 | Msa0730180 | 0.802017 | 6.848091e-49 | -8.615850e-47 |
| Msa0641620 | Msa0740420 | 0.801866 | 7.357189e-49 | -8.615850e-47 |
| Msa0641620 | Msa0747780 | 0.825923 | 3.596005e-54 | -8.615850e-47 |
| Msa0641620 | Msa0760840 | 0.817832 | 2.688170e-52 | -8.615850e-47 |
| Msa0641620 | Msa0760890 | 0.805854 | 1.091683e-49 | -8.615850e-47 |
| Msa0641620 | Msa0761580 | 0.836088 | 1.148630e-56 | -8.615850e-47 |
| Msa0641620 | Msa0799210 | 0.818035 | 2.417960e-52 | -8.615850e-47 |
| Msa0641620 | Msa0802500 | 0.814520 | 1.477785e-51 | -8.615850e-47 |
| Msa0641620 | Msa0802840 | 0.801503 | 8.732117e-49 | -8.615850e-47 |
| Msa0641620 | Msa0803130 | 0.838466 | 2.828863e-57 | -8.615850e-47 |
| Msa0641620 | Msa0820670 | 0.800566 | 1.356925e-48 | -8.615850e-47 |
| Msa0641620 | Msa0841490 | 0.835809 | 1.351599e-56 | -8.615850e-47 |
| Msa0641620 | Msa0843290 | 0.887799 | 1.038973e-72 | -8.615850e-47 |
| Msa0641620 | Msa0867350 | 0.829106 | 6.196145e-55 | -8.615850e-47 |
| Msa0641620 | Msa0872310 | 0.819582 | 1.077027e-52 | -8.615850e-47 |
| Msa0641620 | Msa0873190 | 0.834355 | 3.143609e-56 | -8.615850e-47 |
| Msa0641620 | Msa0876690 | 0.803057 | 4.181009e-49 | -8.615850e-47 |
| Msa0641620 | Msa0898730 | 0.817978 | 2.491267e-52 | -8.615850e-47 |
| Msa0641620 | Msa0905550 | 0.812114 | 4.989114e-51 | -8.615850e-47 |
| Msa0641620 | Msa0929870 | 0.806221 | 9.140959e-50 | -8.615850e-47 |
| Msa0641620 | Msa0930330 | 0.825720 | 4.018893e-54 | -8.615850e-47 |
| Msa0641620 | Msa0931480 | 0.863289 | 2.769409e-64 | -8.615850e-47 |
| Msa0641620 | Msa0937550 | 0.806579 | 7.681798e-50 | -8.615850e-47 |
| Msa0641620 | Msa0938430 | 0.813281 | 2.771341e-51 | -8.615850e-47 |
| Msa0641620 | Msa0941960 | 0.810525 | 1.104062e-50 | -8.615850e-47 |
| Msa0641620 | Msa0951460 | 0.861039 | 1.356985e-63 | -8.615850e-47 |
| Msa0641620 | Msa0951960 | 0.860907 | 1.488961e-63 | -8.615850e-47 |
| Msa0641620 | Msa0974750 | 0.837361 | 5.438664e-57 | -8.615850e-47 |
| Msa0641620 | Msa0975580 | 0.800749 | 1.245318e-48 | -8.615850e-47 |
| Msa0641620 | Msa1004500 | 0.838153 | 3.406056e-57 | -8.615850e-47 |
| Msa0641620 | Msa1004520 | 0.822629 | 2.138965e-53 | -8.615850e-47 |
| Msa0641620 | Msa1014270 | 0.860531 | 1.936217e-63 | -8.615850e-47 |
| Msa0641620 | Msa1027790 | 0.836129 | 1.121345e-56 | -8.615850e-47 |
| Msa0641620 | Msa1028460 | 0.803357 | 3.622749e-49 | -8.615850e-47 |
| Msa0641620 | Msa1037900 | 0.815013 | 1.149179e-51 | -8.615850e-47 |
| Msa0641620 | Msa1041530 | 0.831369 | 1.735612e-55 | -8.615850e-47 |
| Msa0641620 | Msa1045880 | 0.816092 | 6.608561e-52 | -8.615850e-47 |
| Msa0641620 | Msa1045970 | 0.820007 | 8.612457e-53 | -8.615850e-47 |
| Msa0641620 | Msa1046870 | 0.841752 | 3.927633e-58 | -8.615850e-47 |
| Msa0641620 | Msa1055260 | 0.838591 | 2.626094e-57 | -8.615850e-47 |
| Msa0641620 | Msa1055280 | 0.840094 | 1.069216e-57 | -8.615850e-47 |
| Msa0641620 | Msa1061180 | 0.811124 | 8.191980e-51 | -8.615850e-47 |
| Msa0641620 | Msa1061500 | 0.813530 | 2.443316e-51 | -8.615850e-47 |
| Msa0641620 | Msa1081570 | 0.829002 | 6.566354e-55 | -8.615850e-47 |
| Msa0641620 | Msa1097850 | 0.806922 | 6.502125e-50 | -8.615850e-47 |
| Msa0641620 | Msa1106560 | 0.825841 | 3.760825e-54 | -8.615850e-47 |
| Msa0641620 | Msa1107970 | 0.800369 | 1.488503e-48 | -8.615850e-47 |
| Msa0641620 | Msa1112610 | 0.836054 | 1.171651e-56 | -8.615850e-47 |
| Msa0641620 | Msa1123880 | 0.817982 | 2.485221e-52 | -8.615850e-47 |
| Msa0641620 | Msa1125780 | 0.808444 | 3.087776e-50 | -8.615850e-47 |
| Msa0641620 | Msa1125950 | 0.808229 | 3.431048e-50 | -8.615850e-47 |
| Msa0641620 | Msa1127140 | 0.833292 | 5.798512e-56 | -8.615850e-47 |
| Msa0641620 | Msa1129720 | 0.800062 | 1.718773e-48 | -8.615850e-47 |
| Msa0641620 | Msa1129920 | 0.819307 | 1.243796e-52 | -8.615850e-47 |
| Msa0641620 | Msa1129960 | 0.817376 | 3.406133e-52 | -8.615850e-47 |
| Msa0641620 | Msa1134400 | 0.846390 | 2.238174e-59 | -8.615850e-47 |
| Msa0641620 | Msa1145020 | 0.804808 | 1.808647e-49 | -8.615850e-47 |
| Msa0641620 | Msa1151960 | 0.802500 | 5.447891e-49 | -8.615850e-47 |
| Msa0641620 | Msa1166400 | 0.820278 | 7.464237e-53 | -8.615850e-47 |
| Msa0641620 | Msa1171340 | 0.806855 | 6.717794e-50 | -8.615850e-47 |
| Msa0641620 | Msa1176160 | 0.840642 | 7.689852e-58 | -8.615850e-47 |
| Msa0641620 | Msa1178160 | 0.833707 | 4.569873e-56 | -8.615850e-47 |
| Msa0641620 | Msa1186210 | 0.820148 | 7.991549e-53 | -8.615850e-47 |
| Msa0641620 | Msa1190910 | 0.810796 | 9.644754e-51 | -8.615850e-47 |
| Msa0641620 | Msa1197110 | 0.809473 | 1.859552e-50 | -8.615850e-47 |
| Msa0641620 | Msa1200920 | 0.827232 | 1.752575e-54 | -8.615850e-47 |
| Msa0641620 | Msa1201160 | 0.801716 | 7.896331e-49 | -8.615850e-47 |
| Msa0641620 | Msa1201990 | 0.823326 | 1.471316e-53 | -8.615850e-47 |
| Msa0641620 | Msa1207830 | 0.821150 | 4.705028e-53 | -8.615850e-47 |
| Msa0641620 | Msa1221260 | 0.811629 | 6.363936e-51 | -8.615850e-47 |
| Msa0641620 | Msa1227950 | 0.800505 | 1.396473e-48 | -8.615850e-47 |
| Msa0641620 | Msa1232860 | 0.849836 | 2.503254e-60 | -8.615850e-47 |
| Msa0641620 | Msa1237930 | 0.809739 | 1.630208e-50 | -8.615850e-47 |
| Msa0641620 | Msa1254770 | 0.817255 | 3.625544e-52 | -8.615850e-47 |
| Msa0641620 | Msa1254800 | 0.818355 | 2.046850e-52 | -8.615850e-47 |
| Msa0641620 | Msa1257770 | 0.817323 | 3.500383e-52 | -8.615850e-47 |
| Msa0641620 | Msa1258810 | 0.827564 | 1.459084e-54 | -8.615850e-47 |
| Msa0641620 | Msa1261360 | 0.808303 | 3.309574e-50 | -8.615850e-47 |
| Msa0641620 | Msa1261400 | 0.817015 | 4.104828e-52 | -8.615850e-47 |
| Msa0641620 | Msa1271510 | 0.804658 | 1.943806e-49 | -8.615850e-47 |
| Msa0641620 | Msa1274740 | 0.808320 | 3.282248e-50 | -8.615850e-47 |
| Msa0641620 | Msa1275290 | 0.807312 | 5.375211e-50 | -8.615850e-47 |
| Msa0641620 | Msa1277400 | 0.820872 | 5.450898e-53 | -8.615850e-47 |
| Msa0641620 | Msa1281720 | 0.823963 | 1.043495e-53 | -8.615850e-47 |
| Msa0641620 | Msa1302150 | 0.828741 | 7.593872e-55 | -8.615850e-47 |
| Msa0641620 | Msa1305310 | 0.814952 | 1.185317e-51 | -8.615850e-47 |
| Msa0641620 | Msa1305750 | 0.820307 | 7.351043e-53 | -8.615850e-47 |
| Msa0641620 | Msa1307190 | 0.836908 | 7.101493e-57 | -8.615850e-47 |
| Msa0641620 | Msa1312730 | 0.821531 | 3.842080e-53 | -8.615850e-47 |
| Msa0641620 | Msa1313460 | 0.816590 | 5.112954e-52 | -8.615850e-47 |
| Msa0641620 | Msa1321000 | 0.842462 | 2.547886e-58 | -8.615850e-47 |
| Msa0641620 | Msa1329170 | 0.856277 | 3.586670e-62 | -8.615850e-47 |
| Msa0641620 | Msa1329990 | 0.807832 | 4.169182e-50 | -8.615850e-47 |
| Msa0641620 | Msa1330240 | 0.803330 | 3.669945e-49 | -8.615850e-47 |
| Msa0641620 | Msa1341340 | 0.813101 | 3.035765e-51 | -8.615850e-47 |
| Msa0641620 | Msa1348400 | 0.804479 | 2.118468e-49 | -8.615850e-47 |
| Msa0641620 | Msa1350670 | 0.840409 | 8.846864e-58 | -8.615850e-47 |
| Msa0641620 | Msa1354040 | 0.817136 | 3.856078e-52 | -8.615850e-47 |
| Msa0641620 | Msa1355400 | 0.847299 | 1.262892e-59 | -8.615850e-47 |
| Msa0641620 | Msa1365020 | 0.844855 | 5.837204e-59 | -8.615850e-47 |
| Msa0641620 | Msa1367410 | 0.846966 | 1.557978e-59 | -8.615850e-47 |
| Msa0641620 | Msa1407710 | 0.814035 | 1.891020e-51 | -8.615850e-47 |
| Msa0641620 | Msa1413430 | 0.812870 | 3.410310e-51 | -8.615850e-47 |
| Msa0641620 | Msa1414930 | 0.804278 | 2.332648e-49 | -8.615850e-47 |
| Msa0641620 | Msa1417650 | 0.845344 | 4.307398e-59 | -8.615850e-47 |
| Msa0641620 | Msa1420060 | 0.850036 | 2.200720e-60 | -8.615850e-47 |
| Msa0641620 | Msa1421550 | 0.827785 | 1.291224e-54 | -8.615850e-47 |
| Msa0641620 | Msa1421810 | 0.853601 | 2.145393e-61 | -8.615850e-47 |
| Msa0641620 | Msa1427390 | 0.811080 | 8.372273e-51 | -8.615850e-47 |
| Msa0641620 | Msa1429830 | 0.827824 | 1.263758e-54 | -8.615850e-47 |
| Msa0641620 | Msa1434020 | 0.809943 | 1.473774e-50 | -8.615850e-47 |
| Msa0641620 | Msa1435040 | 0.827968 | 1.167040e-54 | -8.615850e-47 |
| Msa0641620 | Msa1435050 | 0.843720 | 1.178243e-58 | -8.615850e-47 |
| Msa0641620 | Msa1435670 | 0.838930 | 2.146303e-57 | -8.615850e-47 |
| Msa0641620 | Msa1439120 | 0.813711 | 2.229111e-51 | -8.615850e-47 |
| Msa0641620 | Msa1439670 | 0.844958 | 5.474909e-59 | -8.615850e-47 |
| Msa0641620 | Msa1439680 | 0.846583 | 1.982475e-59 | -8.615850e-47 |
| Msa0641620 | Msa1440220 | 0.811071 | 8.408008e-51 | -8.615850e-47 |
| Msa0641620 | Msa1442290 | 0.828010 | 1.140024e-54 | -8.615850e-47 |
| Msa0641620 | Msa1450530 | 0.857811 | 1.265656e-62 | -8.615850e-47 |
| Msa0641620 | Msa1453670 | 0.802337 | 5.884324e-49 | -8.615850e-47 |
| Msa0641620 | Msa1455660 | 0.812807 | 3.520828e-51 | -8.615850e-47 |
| Msa0125280 | Msa0641620 | 0.821810 | 3.311853e-53 | -8.615850e-47 |
| Msa0127440 | Msa0641620 | 0.810102 | 1.361834e-50 | -8.615850e-47 |
| Msa0134040 | Msa0641620 | 0.844999 | 5.339078e-59 | -8.615850e-47 |
| Msa0139900 | Msa0641620 | 0.852424 | 4.658687e-61 | -8.615850e-47 |
| Msa0141670 | Msa0641620 | 0.809016 | 2.329935e-50 | -8.615850e-47 |
| Msa0146470 | Msa0641620 | 0.804193 | 2.429284e-49 | -8.615850e-47 |
| Msa0147600 | Msa0641620 | 0.809073 | 2.266164e-50 | -8.615850e-47 |
| Msa0161100 | Msa0641620 | 0.827094 | 1.891487e-54 | -8.615850e-47 |
| Msa0181090 | Msa0641620 | 0.845590 | 3.693482e-59 | -8.615850e-47 |
| Msa0182640 | Msa0641620 | 0.806264 | 8.950411e-50 | -8.615850e-47 |
| Msa0184070 | Msa0641620 | 0.825478 | 4.586163e-54 | -8.615850e-47 |
| Msa0184990 | Msa0641620 | 0.808106 | 3.645804e-50 | -8.615850e-47 |
| Msa0207180 | Msa0641620 | 0.837781 | 4.243946e-57 | -8.615850e-47 |
| Msa0219190 | Msa0641620 | 0.813343 | 2.685313e-51 | -8.615850e-47 |
| Msa0219660 | Msa0641620 | 0.804758 | 1.852671e-49 | -8.615850e-47 |
| Msa0224690 | Msa0641620 | 0.807002 | 6.252114e-50 | -8.615850e-47 |
| Msa0230400 | Msa0641620 | 0.827125 | 1.859182e-54 | -8.615850e-47 |
| Msa0367370 | Msa0641620 | 0.800662 | 1.297412e-48 | -8.615850e-47 |
| Msa0370600 | Msa0641620 | 0.844751 | 6.225977e-59 | -8.615850e-47 |
| Msa0371540 | Msa0641620 | 0.801011 | 1.100888e-48 | -8.615850e-47 |
| Msa0378340 | Msa0641620 | 0.806720 | 7.172149e-50 | -8.615850e-47 |
| Msa0380060 | Msa0641620 | 0.803092 | 4.112000e-49 | -8.615850e-47 |
| Msa0382290 | Msa0641620 | 0.821828 | 3.281506e-53 | -8.615850e-47 |
| Msa0382560 | Msa0641620 | 0.833877 | 4.143451e-56 | -8.615850e-47 |
| Msa0398590 | Msa0641620 | 0.813830 | 2.098640e-51 | -8.615850e-47 |
| Msa0408640 | Msa0641620 | 0.845839 | 3.162175e-59 | -8.615850e-47 |
| Msa0413930 | Msa0641620 | 0.806845 | 6.750057e-50 | -8.615850e-47 |
| Msa0418200 | Msa0641620 | 0.842846 | 2.014347e-58 | -8.615850e-47 |
| Msa0418480 | Msa0641620 | 0.859884 | 3.036407e-63 | -8.615850e-47 |
| Msa0427690 | Msa0641620 | 0.805021 | 1.632472e-49 | -8.615850e-47 |
| Msa0429270 | Msa0641620 | 0.812319 | 4.500971e-51 | -8.615850e-47 |
| Msa0431800 | Msa0641620 | 0.840367 | 9.074090e-58 | -8.615850e-47 |
| Msa0457870 | Msa0641620 | 0.801507 | 8.715399e-49 | -8.615850e-47 |
| Msa0464540 | Msa0641620 | 0.847051 | 1.476532e-59 | -8.615850e-47 |
| Msa0465860 | Msa0641620 | 0.856582 | 2.918642e-62 | -8.615850e-47 |
| Msa0257130 | Msa0641620 | 0.802058 | 6.717742e-49 | -8.615850e-47 |
| Msa0259720 | Msa0641620 | 0.811161 | 8.038326e-51 | -8.615850e-47 |
| Msa0260960 | Msa0641620 | 0.810012 | 1.424186e-50 | -8.615850e-47 |
| Msa0260970 | Msa0641620 | 0.846627 | 1.928878e-59 | -8.615850e-47 |
| Msa0264600 | Msa0641620 | 0.809360 | 1.966356e-50 | -8.615850e-47 |
| Msa0274780 | Msa0641620 | 0.828268 | 9.882888e-55 | -8.615850e-47 |
| Msa0290950 | Msa0641620 | 0.814687 | 1.356987e-51 | -8.615850e-47 |
| Msa0290970 | Msa0641620 | 0.801518 | 8.669326e-49 | -8.615850e-47 |
| Msa0298240 | Msa0641620 | 0.802209 | 6.254461e-49 | -8.615850e-47 |
| Msa0315480 | Msa0641620 | 0.849995 | 2.259435e-60 | -8.615850e-47 |
| Msa0331780 | Msa0641620 | 0.813241 | 2.828331e-51 | -8.615850e-47 |
| Msa0339990 | Msa0641620 | 0.812433 | 4.251250e-51 | -8.615850e-47 |
| Msa0351510 | Msa0641620 | 0.849632 | 2.854120e-60 | -8.615850e-47 |
| Msa0358230 | Msa0641620 | 0.838107 | 3.499279e-57 | -8.615850e-47 |
| Msa0359250 | Msa0641620 | 0.803187 | 3.929741e-49 | -8.615850e-47 |
| Msa0361250 | Msa0641620 | 0.816780 | 4.635114e-52 | -8.615850e-47 |
| Msa0361260 | Msa0641620 | 0.843793 | 1.126369e-58 | -8.615850e-47 |
| Msa0510230 | Msa0641620 | 0.868105 | 8.358856e-66 | -8.615850e-47 |
| Msa0518520 | Msa0641620 | 0.807465 | 4.988272e-50 | -8.615850e-47 |
| Msa0519200 | Msa0641620 | 0.806535 | 7.849116e-50 | -8.615850e-47 |
| Msa0520730 | Msa0641620 | 0.800269 | 1.560124e-48 | -8.615850e-47 |
| Msa0524210 | Msa0641620 | 0.843490 | 1.356679e-58 | -8.615850e-47 |
| Msa0525240 | Msa0641620 | 0.826507 | 2.612393e-54 | -8.615850e-47 |
| Msa0528940 | Msa0641620 | 0.832161 | 1.107052e-55 | -8.615850e-47 |
| Msa0532840 | Msa0641620 | 0.801146 | 1.033337e-48 | -8.615850e-47 |
| Msa0537270 | Msa0641620 | 0.883761 | 3.411435e-71 | -8.615850e-47 |
| Msa0537920 | Msa0641620 | 0.807185 | 5.718451e-50 | -8.615850e-47 |
| Msa0538570 | Msa0641620 | 0.861070 | 1.328461e-63 | -8.615850e-47 |
| Msa0543850 | Msa0641620 | 0.871633 | 5.889375e-67 | -8.615850e-47 |
| Msa0547050 | Msa0641620 | 0.826802 | 2.220788e-54 | -8.615850e-47 |
| Msa0561510 | Msa0641620 | 0.839724 | 1.335576e-57 | -8.615850e-47 |
| Msa0567290 | Msa0641620 | 0.800287 | 1.546831e-48 | -8.615850e-47 |
| Msa0575250 | Msa0641620 | 0.832250 | 1.052302e-55 | -8.615850e-47 |
| Msa0578320 | Msa0641620 | 0.805203 | 1.495032e-49 | -8.615850e-47 |
| Msa0581340 | Msa0641620 | 0.813103 | 3.032556e-51 | -8.615850e-47 |
| Msa0585730 | Msa0641620 | 0.801992 | 6.930910e-49 | -8.615850e-47 |
| Msa0593710 | Msa0641620 | 0.877469 | 6.127279e-69 | -8.615850e-47 |
| Msa0594390 | Msa0641620 | 0.865223 | 6.901246e-65 | -8.615850e-47 |
| Msa0599690 | Msa0641620 | 0.831869 | 1.306668e-55 | -8.615850e-47 |
| Msa0600390 | Msa0641620 | 0.804783 | 1.830516e-49 | -8.615850e-47 |
| Msa0601110 | Msa0641620 | 0.981583 | 6.065316e-153 | -8.615850e-47 |
| Msa0601120 | Msa0641620 | 0.979410 | 6.585185e-148 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0641620 | MtrunA17_Chr4g0026171 | 97.647 | 170 | 4 | 0 | 1 | 170 | 1 | 170 | 1.68e-121 | 339 |
| Msa0641620 | MtrunA17_Chr2g0321621 | 67.442 | 172 | 54 | 2 | 1 | 170 | 38 | 209 | 6.37e-83 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0641620 | AT5G22430.1 | 47.134 | 157 | 81 | 2 | 15 | 170 | 17 | 172 | 7.67e-46 | 148 |
| Msa0641620 | AT2G27385.2 | 45.181 | 166 | 82 | 3 | 5 | 170 | 6 | 162 | 4.91e-41 | 135 |
| Msa0641620 | AT2G27385.1 | 45.181 | 166 | 82 | 3 | 5 | 170 | 17 | 173 | 7.56e-41 | 135 |
| Msa0641620 | AT2G27385.3 | 45.181 | 166 | 82 | 3 | 5 | 170 | 17 | 173 | 7.56e-41 | 135 |
Find 36 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCCTTACAATTTGTGTTT+TGG | 0.164797 | 4_3:+42277815 | None:intergenic |
| CAAGTTTCACAAGTTATTAA+AGG | 0.220047 | 4_3:-42277895 | Msa0641620:CDS |
| TGAACACACATGATTAATTA+AGG | 0.275899 | 4_3:+42277688 | None:intergenic |
| AACTGTTTGGCAAAACTTCT+TGG | 0.296592 | 4_3:-42277952 | Msa0641620:CDS |
| ATCAGCATGTGAAATTGTTC+AGG | 0.312927 | 4_3:-42278917 | Msa0641620:CDS |
| CAAAGGAAGATCAATAGTTT+TGG | 0.317110 | 4_3:+42277774 | None:intergenic |
| TCTTCCTTTGCCTCCAGAAT+GGG | 0.330802 | 4_3:-42277761 | Msa0641620:CDS |
| CTAGGTGCCAAACCCCATTC+TGG | 0.344968 | 4_3:+42277748 | None:intergenic |
| TGTAAGGCTGCAAAACCTAT+TGG | 0.353116 | 4_3:-42277802 | Msa0641620:CDS |
| CTTTAATAACTTGTGAAACT+TGG | 0.355048 | 4_3:+42277896 | None:intergenic |
| AATTAAGGTATTCCAATGAT+AGG | 0.380107 | 4_3:+42277703 | None:intergenic |
| CAAAGCAGATATATGTTGTA+TGG | 0.380242 | 4_3:-42277459 | Msa0641620:three_prime_UTR |
| ACTCATAGCTACGATTTATC+TGG | 0.396323 | 4_3:-42278871 | Msa0641620:intron |
| TTTGCCTCCAGAATGGGGTT+TGG | 0.402516 | 4_3:-42277755 | Msa0641620:CDS |
| ATCTTCCTTTGCCTCCAGAA+TGG | 0.404991 | 4_3:-42277762 | Msa0641620:CDS |
| ATGTACTAACATTAGTTCAT+AGG | 0.454796 | 4_3:+42277505 | None:intergenic |
| CTTCTGTAGTTGTCATAGCT+AGG | 0.461561 | 4_3:+42278028 | None:intergenic |
| GAACAATTTCACATGCTGAT+AGG | 0.462045 | 4_3:+42278920 | None:intergenic |
| TATGCCATGAGCAATGAAAC+AGG | 0.464694 | 4_3:+42278994 | None:intergenic |
| TGAGGGAAGGTTAACCTTGA+AGG | 0.474424 | 4_3:+42277996 | None:intergenic |
| TGTTTGGCAAAACTTCTTGG+TGG | 0.491974 | 4_3:-42277949 | Msa0641620:CDS |
| CTTCCTTTGCCTCCAGAATG+GGG | 0.503336 | 4_3:-42277760 | Msa0641620:CDS |
| ATTCCAATGATAGGAACAAA+AGG | 0.504181 | 4_3:+42277712 | None:intergenic |
| AGAAGAAGATGGCTCCTTCA+AGG | 0.515472 | 4_3:-42278010 | Msa0641620:CDS |
| AGATATATGTTGTATGGGTG+AGG | 0.540735 | 4_3:-42277453 | Msa0641620:three_prime_UTR |
| CATGATATCAAGAAACTAAG+AGG | 0.542494 | 4_3:+42277841 | None:intergenic |
| AAAGCAGATATATGTTGTAT+GGG | 0.555176 | 4_3:-42277458 | Msa0641620:three_prime_UTR |
| AAACCCCATTCTGGAGGCAA+AGG | 0.556721 | 4_3:+42277757 | None:intergenic |
| TCAGCATGTGAAATTGTTCA+GGG | 0.561309 | 4_3:-42278916 | Msa0641620:CDS |
| AAAGGTACATAATAGCTACT+AGG | 0.564274 | 4_3:+42277730 | None:intergenic |
| ATTAATCATGTGTGTTCAAG+TGG | 0.570855 | 4_3:-42277683 | Msa0641620:three_prime_UTR |
| ACAAAACAATGAAATTGAAG+AGG | 0.592895 | 4_3:+42279030 | None:intergenic |
| ATGACAACTACAGAAGAAGA+TGG | 0.604128 | 4_3:-42278021 | Msa0641620:CDS |
| AAGGTCACAGTGAAATGTGA+AGG | 0.615631 | 4_3:-42278060 | Msa0641620:CDS |
| ATGAATCATGTATGTAGCTG+TGG | 0.637271 | 4_3:-42277568 | Msa0641620:three_prime_UTR |
| GGTGCCAAACCCCATTCTGG+AGG | 0.664114 | 4_3:+42277751 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAACATTTAATTAAACTAAA+AGG | + | chr4_3:42277633-42277652 | None:intergenic | 15.0% |
| !! | AATAGTAGACATATATATTA+TGG | - | chr4_3:42277688-42277707 | Msa0641620:exon | 15.0% |
| !! | TTTCTTAGATATTATTAACA+AGG | + | chr4_3:42278054-42278073 | None:intergenic | 15.0% |
| !! | ACTTGAGTAATAAAAATTAT+AGG | - | chr4_3:42278798-42278817 | Msa0641620:intron | 15.0% |
| !! | CTTGAGTAATAAAAATTATA+GGG | - | chr4_3:42278799-42278818 | Msa0641620:intron | 15.0% |
| !! | GAACATTTAATTAAACTAAA+AGG | + | chr4_3:42277633-42277652 | None:intergenic | 15.0% |
| !! | AATAGTAGACATATATATTA+TGG | - | chr4_3:42277688-42277707 | Msa0641620:exon | 15.0% |
| !! | TTTCTTAGATATTATTAACA+AGG | + | chr4_3:42278054-42278073 | None:intergenic | 15.0% |
| !! | ACTTGAGTAATAAAAATTAT+AGG | - | chr4_3:42278798-42278817 | Msa0641620:intron | 15.0% |
| !! | CTTGAGTAATAAAAATTATA+GGG | - | chr4_3:42278799-42278818 | Msa0641620:intron | 15.0% |
| !!! | TAAAAAATAAGAGCATTGTT+TGG | + | chr4_3:42277831-42277850 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGTCCCTAATTA+TGG | - | chr4_3:42277844-42277863 | Msa0641620:CDS | 20.0% |
| !!! | TTTTTAATGTCCCTAATTAT+GGG | - | chr4_3:42277845-42277864 | Msa0641620:CDS | 20.0% |
| !! | ATCATGTATGTTTGTTTAAA+AGG | + | chr4_3:42277881-42277900 | None:intergenic | 20.0% |
| !!! | TTTTTTCACTCAAATCAATT+CGG | + | chr4_3:42277985-42278004 | None:intergenic | 20.0% |
| !!! | TGTAATTTTTTAGAAAGAGT+TGG | - | chr4_3:42278178-42278197 | Msa0641620:intron | 20.0% |
| !!! | GTAATTTTTTAGAAAGAGTT+GGG | - | chr4_3:42278179-42278198 | Msa0641620:intron | 20.0% |
| !!! | TAATTTTTTAGAAAGAGTTG+GGG | - | chr4_3:42278180-42278199 | Msa0641620:intron | 20.0% |
| !!! | TAAAAAATAAGAGCATTGTT+TGG | + | chr4_3:42277831-42277850 | None:intergenic | 20.0% |
| !!! | TTTTTTAATGTCCCTAATTA+TGG | - | chr4_3:42277844-42277863 | Msa0641620:CDS | 20.0% |
| !!! | TTTTTAATGTCCCTAATTAT+GGG | - | chr4_3:42277845-42277864 | Msa0641620:CDS | 20.0% |
| !! | ATCATGTATGTTTGTTTAAA+AGG | + | chr4_3:42277881-42277900 | None:intergenic | 20.0% |
| !!! | TTTTTTCACTCAAATCAATT+CGG | + | chr4_3:42277985-42278004 | None:intergenic | 20.0% |
| !!! | TGTAATTTTTTAGAAAGAGT+TGG | - | chr4_3:42278178-42278197 | Msa0641620:intron | 20.0% |
| !!! | GTAATTTTTTAGAAAGAGTT+GGG | - | chr4_3:42278179-42278198 | Msa0641620:intron | 20.0% |
| !!! | TAATTTTTTAGAAAGAGTTG+GGG | - | chr4_3:42278180-42278199 | Msa0641620:intron | 20.0% |
| ! | TAAAATTGCTCCCATAATTA+GGG | + | chr4_3:42277858-42277877 | None:intergenic | 25.0% |
| !! | AACGTCTCAAATTATACTTT+TGG | - | chr4_3:42278150-42278169 | Msa0641620:intron | 25.0% |
| !!! | AATTTTTTAGAAAGAGTTGG+GGG | - | chr4_3:42278181-42278200 | Msa0641620:intron | 25.0% |
| !! | TCCATGATTTTCAGATATTA+AGG | - | chr4_3:42278370-42278389 | Msa0641620:intron | 25.0% |
| ! | ACCTTAATATCTGAAAATCA+TGG | + | chr4_3:42278374-42278393 | None:intergenic | 25.0% |
| !!! | TGAAACTTGGTTTTGTTTTT+TGG | + | chr4_3:42278543-42278562 | None:intergenic | 25.0% |
| !! | CTTTAATAACTTGTGAAACT+TGG | + | chr4_3:42278556-42278575 | None:intergenic | 25.0% |
| ! | CAAGTTTCACAAGTTATTAA+AGG | - | chr4_3:42278554-42278573 | Msa0641620:intron | 25.0% |
| !! | AATTAAGGTATTCCAATGAT+AGG | + | chr4_3:42278749-42278768 | None:intergenic | 25.0% |
| ! | TGAACACACATGATTAATTA+AGG | + | chr4_3:42278764-42278783 | None:intergenic | 25.0% |
| ! | ATGTACTAACATTAGTTCAT+AGG | + | chr4_3:42278947-42278966 | None:intergenic | 25.0% |
| ! | AAAGCAGATATATGTTGTAT+GGG | - | chr4_3:42278991-42279010 | Msa0641620:exon | 25.0% |
| ! | TAAAATTGCTCCCATAATTA+GGG | + | chr4_3:42277858-42277877 | None:intergenic | 25.0% |
| !! | AACGTCTCAAATTATACTTT+TGG | - | chr4_3:42278150-42278169 | Msa0641620:intron | 25.0% |
| !!! | AATTTTTTAGAAAGAGTTGG+GGG | - | chr4_3:42278181-42278200 | Msa0641620:intron | 25.0% |
| !! | TCCATGATTTTCAGATATTA+AGG | - | chr4_3:42278370-42278389 | Msa0641620:intron | 25.0% |
| ! | ACCTTAATATCTGAAAATCA+TGG | + | chr4_3:42278374-42278393 | None:intergenic | 25.0% |
| !!! | TGAAACTTGGTTTTGTTTTT+TGG | + | chr4_3:42278543-42278562 | None:intergenic | 25.0% |
| !! | CTTTAATAACTTGTGAAACT+TGG | + | chr4_3:42278556-42278575 | None:intergenic | 25.0% |
| ! | CAAGTTTCACAAGTTATTAA+AGG | - | chr4_3:42278554-42278573 | Msa0641620:intron | 25.0% |
| !! | AATTAAGGTATTCCAATGAT+AGG | + | chr4_3:42278749-42278768 | None:intergenic | 25.0% |
| ! | TGAACACACATGATTAATTA+AGG | + | chr4_3:42278764-42278783 | None:intergenic | 25.0% |
| ! | ATGTACTAACATTAGTTCAT+AGG | + | chr4_3:42278947-42278966 | None:intergenic | 25.0% |
| ! | AAAGCAGATATATGTTGTAT+GGG | - | chr4_3:42278991-42279010 | Msa0641620:exon | 25.0% |
| TTGTTTGGAGATTATAGCTA+GGG | + | chr4_3:42277816-42277835 | None:intergenic | 30.0% | |
| ATTGTTTGGAGATTATAGCT+AGG | + | chr4_3:42277817-42277836 | None:intergenic | 30.0% | |
| GTAAAATTGCTCCCATAATT+AGG | + | chr4_3:42277859-42277878 | None:intergenic | 30.0% | |
| !! | ACAAGAGTTTTTGTGTTGTT+TGG | + | chr4_3:42277914-42277933 | None:intergenic | 30.0% |
| !!! | CTCCCCTAATTTTTTTGTAA+GGG | - | chr4_3:42278009-42278028 | Msa0641620:CDS | 30.0% |
| ! | AAGGCCCTTTATTTGATTAA+GGG | + | chr4_3:42278035-42278054 | None:intergenic | 30.0% |
| !!! | ACGTTTTTTTCCTCTCTTTT+CGG | + | chr4_3:42278135-42278154 | None:intergenic | 30.0% |
| AAAAACTTCCATGAACTGTT+TGG | - | chr4_3:42278484-42278503 | Msa0641620:intron | 30.0% | |
| !! | TTTTTGGCATAAAGCTGAAT+TGG | + | chr4_3:42278527-42278546 | None:intergenic | 30.0% |
| CATGATATCAAGAAACTAAG+AGG | + | chr4_3:42278611-42278630 | None:intergenic | 30.0% | |
| ! | AGCCTTACAATTTGTGTTTT+GGG | + | chr4_3:42278636-42278655 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGGAAGAACCAAT+AGG | + | chr4_3:42278665-42278684 | None:intergenic | 30.0% |
| ! | CAAAGGAAGATCAATAGTTT+TGG | + | chr4_3:42278678-42278697 | None:intergenic | 30.0% |
| ! | AAAGGTACATAATAGCTACT+AGG | + | chr4_3:42278722-42278741 | None:intergenic | 30.0% |
| ATTCCAATGATAGGAACAAA+AGG | + | chr4_3:42278740-42278759 | None:intergenic | 30.0% | |
| ATTAATCATGTGTGTTCAAG+TGG | - | chr4_3:42278766-42278785 | Msa0641620:intron | 30.0% | |
| CAAAGCAGATATATGTTGTA+TGG | - | chr4_3:42278990-42279009 | Msa0641620:exon | 30.0% | |
| TTGTTTGGAGATTATAGCTA+GGG | + | chr4_3:42277816-42277835 | None:intergenic | 30.0% | |
| ATTGTTTGGAGATTATAGCT+AGG | + | chr4_3:42277817-42277836 | None:intergenic | 30.0% | |
| GTAAAATTGCTCCCATAATT+AGG | + | chr4_3:42277859-42277878 | None:intergenic | 30.0% | |
| !! | ACAAGAGTTTTTGTGTTGTT+TGG | + | chr4_3:42277914-42277933 | None:intergenic | 30.0% |
| !!! | CTCCCCTAATTTTTTTGTAA+GGG | - | chr4_3:42278009-42278028 | Msa0641620:CDS | 30.0% |
| ! | AAGGCCCTTTATTTGATTAA+GGG | + | chr4_3:42278035-42278054 | None:intergenic | 30.0% |
| !!! | ACGTTTTTTTCCTCTCTTTT+CGG | + | chr4_3:42278135-42278154 | None:intergenic | 30.0% |
| AAAAACTTCCATGAACTGTT+TGG | - | chr4_3:42278484-42278503 | Msa0641620:intron | 30.0% | |
| !! | TTTTTGGCATAAAGCTGAAT+TGG | + | chr4_3:42278527-42278546 | None:intergenic | 30.0% |
| CATGATATCAAGAAACTAAG+AGG | + | chr4_3:42278611-42278630 | None:intergenic | 30.0% | |
| ! | AGCCTTACAATTTGTGTTTT+GGG | + | chr4_3:42278636-42278655 | None:intergenic | 30.0% |
| !!! | ATAGTTTTGGAAGAACCAAT+AGG | + | chr4_3:42278665-42278684 | None:intergenic | 30.0% |
| ! | CAAAGGAAGATCAATAGTTT+TGG | + | chr4_3:42278678-42278697 | None:intergenic | 30.0% |
| ! | AAAGGTACATAATAGCTACT+AGG | + | chr4_3:42278722-42278741 | None:intergenic | 30.0% |
| ATTCCAATGATAGGAACAAA+AGG | + | chr4_3:42278740-42278759 | None:intergenic | 30.0% | |
| ATTAATCATGTGTGTTCAAG+TGG | - | chr4_3:42278766-42278785 | Msa0641620:intron | 30.0% | |
| CAAAGCAGATATATGTTGTA+TGG | - | chr4_3:42278990-42279009 | Msa0641620:exon | 30.0% | |
| ! | TTTTCCTGTTTCATTGCTCA+TGG | - | chr4_3:42277451-42277470 | Msa0641620:three_prime_UTR | 35.0% |
| GAACAATTTCACATGCTGAT+AGG | + | chr4_3:42277532-42277551 | None:intergenic | 35.0% | |
| ATCAGCATGTGAAATTGTTC+AGG | - | chr4_3:42277532-42277551 | Msa0641620:three_prime_UTR | 35.0% | |
| TCAGCATGTGAAATTGTTCA+GGG | - | chr4_3:42277533-42277552 | Msa0641620:three_prime_UTR | 35.0% | |
| ACTCATAGCTACGATTTATC+TGG | - | chr4_3:42277578-42277597 | Msa0641620:three_prime_UTR | 35.0% | |
| ! | GTTTTACCAGATGTCTCTTT+CGG | + | chr4_3:42277794-42277813 | None:intergenic | 35.0% |
| TCAATTCGGATGTACACATA+CGG | + | chr4_3:42277971-42277990 | None:intergenic | 35.0% | |
| CCTTACAAAAAAATTAGGGG+AGG | + | chr4_3:42278011-42278030 | None:intergenic | 35.0% | |
| !!! | CCTCCCCTAATTTTTTTGTA+AGG | - | chr4_3:42278008-42278027 | Msa0641620:CDS | 35.0% |
| GGCCCTTACAAAAAAATTAG+GGG | + | chr4_3:42278014-42278033 | None:intergenic | 35.0% | |
| GGGCCCTTACAAAAAAATTA+GGG | + | chr4_3:42278015-42278034 | None:intergenic | 35.0% | |
| AGGGCCCTTACAAAAAAATT+AGG | + | chr4_3:42278016-42278035 | None:intergenic | 35.0% | |
| AAGGGCCCTTAATCAAATAA+AGG | - | chr4_3:42278027-42278046 | Msa0641620:CDS | 35.0% | |
| AGGGCCCTTAATCAAATAAA+GGG | - | chr4_3:42278028-42278047 | Msa0641620:CDS | 35.0% | |
| ! | CAAGGCCCTTTATTTGATTA+AGG | + | chr4_3:42278036-42278055 | None:intergenic | 35.0% |
| ! | TTCTAGCTAGGTACATGTTT+GGG | + | chr4_3:42278104-42278123 | None:intergenic | 35.0% |
| AAGTATACTTCCGAAAAGAG+AGG | - | chr4_3:42278122-42278141 | Msa0641620:intron | 35.0% | |
| AAGGAAGCTATCTTGACTTA+TGG | - | chr4_3:42278206-42278225 | Msa0641620:intron | 35.0% | |
| CATCGACCATTTGACAAATA+AGG | + | chr4_3:42278258-42278277 | None:intergenic | 35.0% | |
| ATGACAACTACAGAAGAAGA+TGG | - | chr4_3:42278428-42278447 | Msa0641620:intron | 35.0% | |
| ! | GAAGTTTTTGTGTTGTCTGA+GGG | + | chr4_3:42278473-42278492 | None:intergenic | 35.0% |
| ! | AAGTTTTGCCAAACAGTTCA+TGG | + | chr4_3:42278495-42278514 | None:intergenic | 35.0% |
| AACTGTTTGGCAAAACTTCT+TGG | - | chr4_3:42278497-42278516 | Msa0641620:intron | 35.0% | |
| !! | CCTTACAATTTGTGTTTTGG+GGG | + | chr4_3:42278634-42278653 | None:intergenic | 35.0% |
| ! | GCCTTACAATTTGTGTTTTG+GGG | + | chr4_3:42278635-42278654 | None:intergenic | 35.0% |
| ! | CAGCCTTACAATTTGTGTTT+TGG | + | chr4_3:42278637-42278656 | None:intergenic | 35.0% |
| ! | GTACCTTTTGTTCCTATCAT+TGG | - | chr4_3:42278734-42278753 | Msa0641620:intron | 35.0% |
| ATGAATCATGTATGTAGCTG+TGG | - | chr4_3:42278881-42278900 | Msa0641620:CDS | 35.0% | |
| AGATATATGTTGTATGGGTG+AGG | - | chr4_3:42278996-42279015 | Msa0641620:exon | 35.0% | |
| ! | TTTTCCTGTTTCATTGCTCA+TGG | - | chr4_3:42277451-42277470 | Msa0641620:three_prime_UTR | 35.0% |
| GAACAATTTCACATGCTGAT+AGG | + | chr4_3:42277532-42277551 | None:intergenic | 35.0% | |
| ATCAGCATGTGAAATTGTTC+AGG | - | chr4_3:42277532-42277551 | Msa0641620:three_prime_UTR | 35.0% | |
| TCAGCATGTGAAATTGTTCA+GGG | - | chr4_3:42277533-42277552 | Msa0641620:three_prime_UTR | 35.0% | |
| ACTCATAGCTACGATTTATC+TGG | - | chr4_3:42277578-42277597 | Msa0641620:three_prime_UTR | 35.0% | |
| ! | GTTTTACCAGATGTCTCTTT+CGG | + | chr4_3:42277794-42277813 | None:intergenic | 35.0% |
| TCAATTCGGATGTACACATA+CGG | + | chr4_3:42277971-42277990 | None:intergenic | 35.0% | |
| CCTTACAAAAAAATTAGGGG+AGG | + | chr4_3:42278011-42278030 | None:intergenic | 35.0% | |
| !!! | CCTCCCCTAATTTTTTTGTA+AGG | - | chr4_3:42278008-42278027 | Msa0641620:CDS | 35.0% |
| GGCCCTTACAAAAAAATTAG+GGG | + | chr4_3:42278014-42278033 | None:intergenic | 35.0% | |
| GGGCCCTTACAAAAAAATTA+GGG | + | chr4_3:42278015-42278034 | None:intergenic | 35.0% | |
| AGGGCCCTTACAAAAAAATT+AGG | + | chr4_3:42278016-42278035 | None:intergenic | 35.0% | |
| AAGGGCCCTTAATCAAATAA+AGG | - | chr4_3:42278027-42278046 | Msa0641620:CDS | 35.0% | |
| AGGGCCCTTAATCAAATAAA+GGG | - | chr4_3:42278028-42278047 | Msa0641620:CDS | 35.0% | |
| ! | CAAGGCCCTTTATTTGATTA+AGG | + | chr4_3:42278036-42278055 | None:intergenic | 35.0% |
| ! | TTCTAGCTAGGTACATGTTT+GGG | + | chr4_3:42278104-42278123 | None:intergenic | 35.0% |
| AAGTATACTTCCGAAAAGAG+AGG | - | chr4_3:42278122-42278141 | Msa0641620:intron | 35.0% | |
| AAGGAAGCTATCTTGACTTA+TGG | - | chr4_3:42278206-42278225 | Msa0641620:intron | 35.0% | |
| CATCGACCATTTGACAAATA+AGG | + | chr4_3:42278258-42278277 | None:intergenic | 35.0% | |
| ATGACAACTACAGAAGAAGA+TGG | - | chr4_3:42278428-42278447 | Msa0641620:intron | 35.0% | |
| ! | GAAGTTTTTGTGTTGTCTGA+GGG | + | chr4_3:42278473-42278492 | None:intergenic | 35.0% |
| ! | AAGTTTTGCCAAACAGTTCA+TGG | + | chr4_3:42278495-42278514 | None:intergenic | 35.0% |
| AACTGTTTGGCAAAACTTCT+TGG | - | chr4_3:42278497-42278516 | Msa0641620:intron | 35.0% | |
| !! | CCTTACAATTTGTGTTTTGG+GGG | + | chr4_3:42278634-42278653 | None:intergenic | 35.0% |
| ! | GCCTTACAATTTGTGTTTTG+GGG | + | chr4_3:42278635-42278654 | None:intergenic | 35.0% |
| ! | CAGCCTTACAATTTGTGTTT+TGG | + | chr4_3:42278637-42278656 | None:intergenic | 35.0% |
| ! | GTACCTTTTGTTCCTATCAT+TGG | - | chr4_3:42278734-42278753 | Msa0641620:intron | 35.0% |
| ATGAATCATGTATGTAGCTG+TGG | - | chr4_3:42278881-42278900 | Msa0641620:CDS | 35.0% | |
| AGATATATGTTGTATGGGTG+AGG | - | chr4_3:42278996-42279015 | Msa0641620:exon | 35.0% | |
| TATGCCATGAGCAATGAAAC+AGG | + | chr4_3:42277458-42277477 | None:intergenic | 40.0% | |
| CAATTCGGATGTACACATAC+GGG | + | chr4_3:42277970-42277989 | None:intergenic | 40.0% | |
| ! | CTTCTAGCTAGGTACATGTT+TGG | + | chr4_3:42278105-42278124 | None:intergenic | 40.0% |
| ! | TCGGAAGTATACTTCTAGCT+AGG | + | chr4_3:42278116-42278135 | None:intergenic | 40.0% |
| TTAGAAAGAGTTGGGGGAAA+AGG | - | chr4_3:42278187-42278206 | Msa0641620:intron | 40.0% | |
| ACTTATGGTTCCAACGATGT+TGG | - | chr4_3:42278221-42278240 | Msa0641620:intron | 40.0% | |
| TGGAAGAACAATGAGAGTCA+AGG | + | chr4_3:42278354-42278373 | None:intergenic | 40.0% | |
| AAGGTCACAGTGAAATGTGA+AGG | - | chr4_3:42278389-42278408 | Msa0641620:intron | 40.0% | |
| CTTCTGTAGTTGTCATAGCT+AGG | + | chr4_3:42278424-42278443 | None:intergenic | 40.0% | |
| ! | TTTTTGTGTTGTCTGAGGGA+AGG | + | chr4_3:42278469-42278488 | None:intergenic | 40.0% |
| ! | GGAAGTTTTTGTGTTGTCTG+AGG | + | chr4_3:42278474-42278493 | None:intergenic | 40.0% |
| TGTTTGGCAAAACTTCTTGG+TGG | - | chr4_3:42278500-42278519 | Msa0641620:intron | 40.0% | |
| CCCCCAAAACACAAATTGTA+AGG | - | chr4_3:42278631-42278650 | Msa0641620:intron | 40.0% | |
| TGTAAGGCTGCAAAACCTAT+TGG | - | chr4_3:42278647-42278666 | Msa0641620:intron | 40.0% | |
| TATGCCATGAGCAATGAAAC+AGG | + | chr4_3:42277458-42277477 | None:intergenic | 40.0% | |
| CAATTCGGATGTACACATAC+GGG | + | chr4_3:42277970-42277989 | None:intergenic | 40.0% | |
| ! | CTTCTAGCTAGGTACATGTT+TGG | + | chr4_3:42278105-42278124 | None:intergenic | 40.0% |
| ! | TCGGAAGTATACTTCTAGCT+AGG | + | chr4_3:42278116-42278135 | None:intergenic | 40.0% |
| TTAGAAAGAGTTGGGGGAAA+AGG | - | chr4_3:42278187-42278206 | Msa0641620:intron | 40.0% | |
| ACTTATGGTTCCAACGATGT+TGG | - | chr4_3:42278221-42278240 | Msa0641620:intron | 40.0% | |
| TGGAAGAACAATGAGAGTCA+AGG | + | chr4_3:42278354-42278373 | None:intergenic | 40.0% | |
| AAGGTCACAGTGAAATGTGA+AGG | - | chr4_3:42278389-42278408 | Msa0641620:intron | 40.0% | |
| CTTCTGTAGTTGTCATAGCT+AGG | + | chr4_3:42278424-42278443 | None:intergenic | 40.0% | |
| ! | TTTTTGTGTTGTCTGAGGGA+AGG | + | chr4_3:42278469-42278488 | None:intergenic | 40.0% |
| ! | GGAAGTTTTTGTGTTGTCTG+AGG | + | chr4_3:42278474-42278493 | None:intergenic | 40.0% |
| TGTTTGGCAAAACTTCTTGG+TGG | - | chr4_3:42278500-42278519 | Msa0641620:intron | 40.0% | |
| CCCCCAAAACACAAATTGTA+AGG | - | chr4_3:42278631-42278650 | Msa0641620:intron | 40.0% | |
| TGTAAGGCTGCAAAACCTAT+TGG | - | chr4_3:42278647-42278666 | Msa0641620:intron | 40.0% | |
| TACCAGATGTCTCTTTCGGT+CGG | + | chr4_3:42277790-42277809 | None:intergenic | 45.0% | |
| GTTCCAACGATGTTGGACTT+GGG | - | chr4_3:42278228-42278247 | Msa0641620:intron | 45.0% | |
| !! | GGTCGGCCTTATTTGTCAAA+TGG | - | chr4_3:42278249-42278268 | Msa0641620:intron | 45.0% |
| AGAAGAAGATGGCTCCTTCA+AGG | - | chr4_3:42278439-42278458 | Msa0641620:intron | 45.0% | |
| TGAGGGAAGGTTAACCTTGA+AGG | + | chr4_3:42278456-42278475 | None:intergenic | 45.0% | |
| ATCTTCCTTTGCCTCCAGAA+TGG | - | chr4_3:42278687-42278706 | Msa0641620:intron | 45.0% | |
| TCTTCCTTTGCCTCCAGAAT+GGG | - | chr4_3:42278688-42278707 | Msa0641620:intron | 45.0% | |
| TACCAGATGTCTCTTTCGGT+CGG | + | chr4_3:42277790-42277809 | None:intergenic | 45.0% | |
| GTTCCAACGATGTTGGACTT+GGG | - | chr4_3:42278228-42278247 | Msa0641620:intron | 45.0% | |
| !! | GGTCGGCCTTATTTGTCAAA+TGG | - | chr4_3:42278249-42278268 | Msa0641620:intron | 45.0% |
| AGAAGAAGATGGCTCCTTCA+AGG | - | chr4_3:42278439-42278458 | Msa0641620:intron | 45.0% | |
| TGAGGGAAGGTTAACCTTGA+AGG | + | chr4_3:42278456-42278475 | None:intergenic | 45.0% | |
| ATCTTCCTTTGCCTCCAGAA+TGG | - | chr4_3:42278687-42278706 | Msa0641620:intron | 45.0% | |
| TCTTCCTTTGCCTCCAGAAT+GGG | - | chr4_3:42278688-42278707 | Msa0641620:intron | 45.0% | |
| !! | ATGTTAATTTATTTATTAAT+AGG | - | chr4_3:42277763-42277782 | Msa0641620:CDS | 5.0% |
| !! | ATGTTAATTTATTTATTAAT+AGG | - | chr4_3:42277763-42277782 | Msa0641620:CDS | 5.0% |
| ACCAGATGTCTCTTTCGGTC+GGG | + | chr4_3:42277789-42277808 | None:intergenic | 50.0% | |
| GGTTCCAACGATGTTGGACT+TGG | - | chr4_3:42278227-42278246 | Msa0641620:intron | 50.0% | |
| CAACGATGTTGGACTTGGGT+CGG | - | chr4_3:42278232-42278251 | Msa0641620:intron | 50.0% | |
| CTTCCTTTGCCTCCAGAATG+GGG | - | chr4_3:42278689-42278708 | Msa0641620:intron | 50.0% | |
| ! | AAACCCCATTCTGGAGGCAA+AGG | + | chr4_3:42278695-42278714 | None:intergenic | 50.0% |
| TTTGCCTCCAGAATGGGGTT+TGG | - | chr4_3:42278694-42278713 | Msa0641620:intron | 50.0% | |
| ACCAGATGTCTCTTTCGGTC+GGG | + | chr4_3:42277789-42277808 | None:intergenic | 50.0% | |
| GGTTCCAACGATGTTGGACT+TGG | - | chr4_3:42278227-42278246 | Msa0641620:intron | 50.0% | |
| CAACGATGTTGGACTTGGGT+CGG | - | chr4_3:42278232-42278251 | Msa0641620:intron | 50.0% | |
| CTTCCTTTGCCTCCAGAATG+GGG | - | chr4_3:42278689-42278708 | Msa0641620:intron | 50.0% | |
| ! | AAACCCCATTCTGGAGGCAA+AGG | + | chr4_3:42278695-42278714 | None:intergenic | 50.0% |
| TTTGCCTCCAGAATGGGGTT+TGG | - | chr4_3:42278694-42278713 | Msa0641620:intron | 50.0% | |
| CGACCCAAGTCCAACATCGT+TGG | + | chr4_3:42278234-42278253 | None:intergenic | 55.0% | |
| CTAGGTGCCAAACCCCATTC+TGG | + | chr4_3:42278704-42278723 | None:intergenic | 55.0% | |
| CGACCCAAGTCCAACATCGT+TGG | + | chr4_3:42278234-42278253 | None:intergenic | 55.0% | |
| CTAGGTGCCAAACCCCATTC+TGG | + | chr4_3:42278704-42278723 | None:intergenic | 55.0% | |
| GCCCGACCGAAAGAGACATC+TGG | - | chr4_3:42277785-42277804 | Msa0641620:CDS | 60.0% | |
| GGTGCCAAACCCCATTCTGG+AGG | + | chr4_3:42278701-42278720 | None:intergenic | 60.0% | |
| GCCCGACCGAAAGAGACATC+TGG | - | chr4_3:42277785-42277804 | Msa0641620:CDS | 60.0% | |
| GGTGCCAAACCCCATTCTGG+AGG | + | chr4_3:42278701-42278720 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 42277422 | 42279049 | 42277422 | ID=Msa0641620;Name=Msa0641620 |
| chr4_3 | mRNA | 42277422 | 42279049 | 42277422 | ID=Msa0641620-mRNA-1;Parent=Msa0641620;Name=Msa0641620-mRNA-1;_AED=0.00;_eAED=0.00;_QI=48|1|1|1|1|1|2|283|170 |
| chr4_3 | exon | 42277422 | 42278087 | 42277422 | ID=Msa0641620-mRNA-1:exon:9505;Parent=Msa0641620-mRNA-1 |
| chr4_3 | exon | 42278872 | 42279049 | 42278872 | ID=Msa0641620-mRNA-1:exon:9504;Parent=Msa0641620-mRNA-1 |
| chr4_3 | five_prime_UTR | 42279002 | 42279049 | 42279002 | ID=Msa0641620-mRNA-1:five_prime_utr;Parent=Msa0641620-mRNA-1 |
| chr4_3 | CDS | 42278872 | 42279001 | 42278872 | ID=Msa0641620-mRNA-1:cds;Parent=Msa0641620-mRNA-1 |
| chr4_3 | CDS | 42277705 | 42278087 | 42277705 | ID=Msa0641620-mRNA-1:cds;Parent=Msa0641620-mRNA-1 |
| chr4_3 | three_prime_UTR | 42277422 | 42277704 | 42277422 | ID=Msa0641620-mRNA-1:three_prime_utr;Parent=Msa0641620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
