AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0318070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318070 MtrunA17_Chr2g0291781 96.278 403 13 1 1 401 1 403 0.0 797
Msa0318070 MtrunA17_Chr5g0411611 44.083 338 188 1 64 401 67 403 4.45e-107 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318070 AT1G36320.1 65.672 335 114 1 68 401 80 414 5.42e-170 482
Msa0318070 AT4G37920.1 41.979 374 206 3 38 401 30 402 1.05e-106 321

Find 121 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTTATGTTATTATATA+TGG 0.164573 2_4:-16375657 Msa0318070:three_prime_UTR
TTGACTATTCGAATCTCTTT+TGG 0.215665 2_4:+16376380 None:intergenic
AGGTTCGAACCTGTATAAAA+AGG 0.229073 2_4:-16375329 Msa0318070:three_prime_UTR
AAAAGTTGATTGAGAAAATT+AGG 0.244374 2_4:-16379462 Msa0318070:five_prime_UTR
TAAACGGTTACTTACTTGTT+AGG 0.266740 2_4:+16379210 None:intergenic
TTAAAGGTATGTTTGGTTAG+AGG 0.276102 2_4:+16375416 None:intergenic
GTTTGAAGCAACGTAGTTAC+AGG 0.303663 2_4:+16379085 None:intergenic
TTAGAGGGGTGGAGCCTTGT+TGG 0.314409 2_4:+16375432 None:intergenic
TCAGAGACATAATGATCTTC+TGG 0.332215 2_4:-16377961 Msa0318070:CDS
GCAAAGAAGGTACCCTCATT+AGG 0.337516 2_4:-16376110 Msa0318070:CDS
CAGGTGTAAATGCATCTTTA+AGG 0.342122 2_4:+16376315 None:intergenic
ACTTGTTAGGGTTTGAAGTT+TGG 0.344170 2_4:+16379223 None:intergenic
AAACTAATCGACGAATTTAT+CGG 0.344840 2_4:+16375173 None:intergenic
TCTCTGATTATTGCAAGAAC+TGG 0.349527 2_4:+16379415 None:intergenic
GCTTTCTGTAGCACCATCAT+AGG 0.351747 2_4:+16377299 None:intergenic
AGTCAAATTAAAGGTATGTT+TGG 0.365988 2_4:+16375409 None:intergenic
ATAAAACTAAGTCAAATTAA+AGG 0.368230 2_4:+16375400 None:intergenic
CTGTAGGAAGATAGACAATT+TGG 0.372225 2_4:-16377208 Msa0318070:CDS
CTCTGATTATTGCAAGAACT+GGG 0.395224 2_4:+16379416 None:intergenic
CGATTGTAACATCAAAAGTT+AGG 0.397051 2_4:-16375812 Msa0318070:three_prime_UTR
CAGAATCGAAACTCACTTGA+TGG 0.414856 2_4:-16379381 Msa0318070:exon
AGGGCCGACAGTTGCTCCTC+AGG 0.422316 2_4:+16376335 None:intergenic
ACAACAGAGTAAGCTGAATC+AGG 0.428216 2_4:-16375857 Msa0318070:three_prime_UTR
GAGCAATGCTGTTGTAAATC+CGG 0.429390 2_4:+16375919 None:intergenic
ATCCACGTGTGAAGCTTCTC+TGG 0.430758 2_4:+16376162 None:intergenic
TAAAGGTATGTTTGGTTAGA+GGG 0.431025 2_4:+16375417 None:intergenic
TTTCCTTCAAGTTCTTCTCC+AGG 0.433509 2_4:+16376296 None:intergenic
TCCAGTGGCCATGTCTTTGA+AGG 0.438197 2_4:-16375617 Msa0318070:three_prime_UTR
CTTGGCAGCAGCCCAAGCTT+TGG 0.438406 2_4:+16377143 None:intergenic
AAAGAGACGAAGCGAGAAAA+GGG 0.440904 2_4:+16379248 None:intergenic
TGTAAAATCCTTCCTACGCT+TGG 0.442996 2_4:+16377896 None:intergenic
CAAAGAAGGTACCCTCATTA+GGG 0.443898 2_4:-16376109 Msa0318070:CDS
GAAAAGAACTGACAAAGCTT+GGG 0.448005 2_4:-16377347 Msa0318070:intron
CAAAGCTTGGGCTGCTGCCA+AGG 0.449883 2_4:-16377142 Msa0318070:CDS
ATGTCCATCAAGTGCAGATC+CGG 0.453798 2_4:-16375938 Msa0318070:three_prime_UTR
AAATCCGGATCTGCACTTGA+TGG 0.457140 2_4:+16375934 None:intergenic
AGGTGTAAATGCATCTTTAA+GGG 0.459121 2_4:+16376316 None:intergenic
TGGGAGAATTCATAATATCT+TGG 0.459633 2_4:+16377244 None:intergenic
AAACGGTTACTTACTTGTTA+GGG 0.461040 2_4:+16379211 None:intergenic
TGAAAAGAACTGACAAAGCT+TGG 0.461245 2_4:-16377348 Msa0318070:intron
GGAGTTTGTGATAAACTCAT+TGG 0.463713 2_4:-16379017 Msa0318070:CDS
GCTTATCATTTGAGCAAAGA+AGG 0.473294 2_4:-16376123 Msa0318070:CDS
CAAGTATATTCTTCGAATTG+AGG 0.483924 2_4:-16376360 Msa0318070:CDS
AAAATTGGAGATGTTAAAGA+AGG 0.485310 2_4:-16376052 Msa0318070:CDS
GATCCCTTGCTTCCCTAATG+AGG 0.485319 2_4:+16376097 None:intergenic
ATAAACCTACTCCAACTGAT+TGG 0.487355 2_4:-16378980 Msa0318070:CDS
CAAATTGTCTATCTTCCTAC+AGG 0.494659 2_4:+16377209 None:intergenic
GAAAGAGACGAAGCGAGAAA+AGG 0.495170 2_4:+16379247 None:intergenic
GAAGAAGAGATGAAAGGTGA+TGG 0.500445 2_4:+16379320 None:intergenic
TATTGATGATCACCAAAGCT+TGG 0.509925 2_4:-16377155 Msa0318070:CDS
GTAGATGAAAGCAAAATGAT+TGG 0.510508 2_4:-16379038 Msa0318070:CDS
GGAGATGTTAAAGAAGGTTG+TGG 0.513343 2_4:-16376046 Msa0318070:CDS
GCCTTCAAAGACATGGCCAC+TGG 0.514010 2_4:+16375616 None:intergenic
ACACCTGGAGAAGAACTTGA+AGG 0.515259 2_4:-16376299 Msa0318070:CDS
AAAGGTATGTTTGGTTAGAG+GGG 0.520684 2_4:+16375418 None:intergenic
TTAGACTTTGAAATTTGAGT+AGG 0.526622 2_4:-16375766 Msa0318070:three_prime_UTR
ACACATAGCTGTCAGATCCT+AGG 0.530809 2_4:-16375349 Msa0318070:three_prime_UTR
CTTCTCCAATCAGTTGGAGT+AGG 0.530886 2_4:+16378975 None:intergenic
ACAATATTATGCTTTAGAGT+AGG 0.538790 2_4:+16375976 None:intergenic
AACAACCTTCTCCAATCAGT+TGG 0.540025 2_4:+16378969 None:intergenic
GGCCATGTCTTTGAAGGCTG+AGG 0.540772 2_4:-16375611 Msa0318070:three_prime_UTR
AAGTCTTGTATAAATGAAAG+AGG 0.542381 2_4:+16376429 None:intergenic
TTCCTCAGCCTTCAAAGACA+TGG 0.544052 2_4:+16375609 None:intergenic
CTTAAAGATGCATTTACACC+TGG 0.546565 2_4:-16376314 Msa0318070:CDS
GATAGAACAAATATTACCAC+AGG 0.552332 2_4:+16375500 None:intergenic
ATTGATGATCACCAAAGCTT+GGG 0.554729 2_4:-16377154 Msa0318070:CDS
GCTGCTGTACAAGCCTATGA+TGG 0.559521 2_4:-16377312 Msa0318070:CDS
GATGAAGAAGAAGAGATGAA+AGG 0.560274 2_4:+16379314 None:intergenic
CTTTGAGCTTCCTCGCGAGA+CGG 0.562250 2_4:+16378844 None:intergenic
GTGTTTATATTTAGACACTT+CGG 0.565524 2_4:-16375889 Msa0318070:three_prime_UTR
GCAATATTGTCTCCAAGCGT+AGG 0.566012 2_4:-16377908 Msa0318070:CDS
TACCCTCATTAGGGAAGCAA+GGG 0.573700 2_4:-16376100 Msa0318070:CDS
AATTGCAGAACAACCTGAAG+AGG 0.574048 2_4:-16375464 Msa0318070:three_prime_UTR
GTACCCTCATTAGGGAAGCA+AGG 0.574896 2_4:-16376101 Msa0318070:CDS
ACAACCTGAAGAGGTAAAAG+AGG 0.577700 2_4:-16375455 Msa0318070:three_prime_UTR
GGTATGTTTGGTTAGAGGGG+TGG 0.580387 2_4:+16375421 None:intergenic
GAACTTCATGTGAAGAGGGT+GGG 0.580814 2_4:-16376019 Msa0318070:exon
TCTTCTGGATGTAATCAGAA+AGG 0.585049 2_4:-16377946 Msa0318070:CDS
AAAAGCTACTCCGTCTCGCG+AGG 0.586113 2_4:-16378854 Msa0318070:CDS
TATTGTCTCCAAGCGTAGGA+AGG 0.587624 2_4:-16377904 Msa0318070:CDS
ACAATATTGCTAATTTCAGA+CGG 0.590828 2_4:+16377921 None:intergenic
TGATTGAGAAAATTAGGCGG+AGG 0.591066 2_4:-16379456 Msa0318070:five_prime_UTR
ATCCCTTGCTTCCCTAATGA+GGG 0.592977 2_4:+16376098 None:intergenic
GCGATTGTGTCATTTGCACG+TGG 0.596481 2_4:-16375744 Msa0318070:three_prime_UTR
TGTTAAAGAAGGTTGTGGAG+AGG 0.599265 2_4:-16376041 Msa0318070:CDS
GGAACTTCATGTGAAGAGGG+TGG 0.603161 2_4:-16376020 Msa0318070:exon
CTACTCCAACTGATTGGAGA+AGG 0.606886 2_4:-16378974 Msa0318070:CDS
TTTGAAGCAACGTAGTTACA+GGG 0.611162 2_4:+16379086 None:intergenic
TTCAAACATGACAAAAGATG+AGG 0.614839 2_4:-16377118 Msa0318070:intron
AGATAATGCTTCGAGTGATG+TGG 0.616055 2_4:-16379060 Msa0318070:CDS
CGTGGGAGTGAAATGTTACA+TGG 0.617115 2_4:-16375726 Msa0318070:three_prime_UTR
AGAGGGTGGGAAACATACTA+AGG 0.618327 2_4:-16376006 Msa0318070:three_prime_UTR
CCACACTTGATGCTGCCTGT+AGG 0.618877 2_4:-16377224 Msa0318070:CDS
TACTAAACTTAGTCTTGACC+AGG 0.618920 2_4:-16375679 Msa0318070:three_prime_UTR
AGAGGTAAAAGAGGCCAACA+AGG 0.621169 2_4:-16375446 Msa0318070:three_prime_UTR
CCTACAGGCAGCATCAAGTG+TGG 0.623280 2_4:+16377224 None:intergenic
TCTTCGAATTGAGGATCCTG+AGG 0.625034 2_4:-16376351 Msa0318070:CDS
CGATTGTGTCATTTGCACGT+GGG 0.626108 2_4:-16375743 Msa0318070:three_prime_UTR
GGTGAAGAATGGGTTGAATG+AGG 0.627714 2_4:+16379290 None:intergenic
AGAGGAACTTCATGTGAAGA+GGG 0.629889 2_4:-16376023 Msa0318070:exon
CTACAGGCAGCATCAAGTGT+GGG 0.630735 2_4:+16377225 None:intergenic
CTATGTGTGTAAATTTCAGT+TGG 0.631826 2_4:+16375364 None:intergenic
TCATTTATACAAGACTTCAG+TGG 0.634013 2_4:-16376423 Msa0318070:CDS
GAGAGGAACTTCATGTGAAG+AGG 0.635612 2_4:-16376024 Msa0318070:exon
AAAAGAACTGACAAAGCTTG+GGG 0.640924 2_4:-16377346 Msa0318070:intron
AAAAGAACTTGATTCGACAC+TGG 0.642159 2_4:-16377178 Msa0318070:CDS
CACCAGAGAAGCTTCACACG+TGG 0.643680 2_4:-16376164 Msa0318070:CDS
TGCTCTTGTGTAGATTGATG+AGG 0.644388 2_4:-16377988 Msa0318070:intron
TCTGATTATTGCAAGAACTG+GGG 0.644859 2_4:+16379417 None:intergenic
AGAACTTGAAGGAAACAATG+AGG 0.645727 2_4:-16376288 Msa0318070:CDS
GGATCCTGAGGAGCAACTGT+CGG 0.649811 2_4:-16376339 Msa0318070:CDS
AATTAGACTTGATGAAATCG+AGG 0.652822 2_4:+16375148 None:intergenic
AATATTTGTTCTATCAAACA+CGG 0.661110 2_4:-16375492 Msa0318070:three_prime_UTR
AGTAAAACAAAATTAACCTG+TGG 0.675068 2_4:-16375516 Msa0318070:three_prime_UTR
ATATAATAACATAAGAGACC+TGG 0.678828 2_4:+16375661 None:intergenic
GGGTGGGAAACATACTAAGG+TGG 0.685600 2_4:-16376003 Msa0318070:three_prime_UTR
GTAAATAGAATATATTCCAG+TGG 0.686075 2_4:-16375632 Msa0318070:three_prime_UTR
AGTTGATTGAGAAAATTAGG+CGG 0.699832 2_4:-16379459 Msa0318070:five_prime_UTR
TCTCGCGAGGAAGCTCAAAG+AGG 0.701476 2_4:-16378841 Msa0318070:intron
GATGGAAGAGAAGAACGCAA+CGG 0.719575 2_4:+16379338 None:intergenic
TCACACGTGGATAAAGACTG+TGG 0.749282 2_4:-16376151 Msa0318070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCAAATATGAAAACA+TGG + chr2_4:16377217-16377236 None:intergenic 15.0%
!!! AAAACATTATAGGTTTTAAA+GGG + chr2_4:16377244-16377263 None:intergenic 15.0%
!!! AAAAACATTATAGGTTTTAA+AGG + chr2_4:16377245-16377264 None:intergenic 15.0%
!! CATAAAACAAAAAACATTAT+AGG + chr2_4:16377254-16377273 None:intergenic 15.0%
!! TTCTGATTTAAAAACTAAAT+AGG + chr2_4:16378149-16378168 None:intergenic 15.0%
!! AAGTCTAATAGTAAAAAAAA+GGG + chr2_4:16378844-16378863 None:intergenic 15.0%
!! AAAGTCTAATAGTAAAAAAA+AGG + chr2_4:16378845-16378864 None:intergenic 15.0%
!! ATAAAACTAAGTCAAATTAA+AGG + chr2_4:16379225-16379244 None:intergenic 15.0%
!!! AAAAGTTGATTGAGAAAATT+AGG - chr2_4:16375160-16375179 Msa0318070:three_prime_UTR 20.0%
!! ATGTTATTATCTGTCTATTT+AGG - chr2_4:16375497-16375516 Msa0318070:three_prime_UTR 20.0%
!! ATAACAGTTCTATATCATAA+AGG - chr2_4:16376090-16376109 Msa0318070:CDS 20.0%
!! TAACAGTTCTATATCATAAA+GGG - chr2_4:16376091-16376110 Msa0318070:CDS 20.0%
!! AGGCATTTATCAATAATTAA+AGG - chr2_4:16376372-16376391 Msa0318070:CDS 20.0%
!! TTAATTGGAATATAAGAAAC+AGG - chr2_4:16376575-16376594 Msa0318070:intron 20.0%
!!! TCGTTTTTGAAATTTGAATT+TGG - chr2_4:16376832-16376851 Msa0318070:intron 20.0%
!! ATTCGAATATAACCATAATT+AGG - chr2_4:16377064-16377083 Msa0318070:intron 20.0%
!!! TTTTATATGTATGTATTCTG+AGG + chr2_4:16377141-16377160 None:intergenic 20.0%
!! AAAAGATGAGGTAAAATTTA+TGG - chr2_4:16377516-16377535 Msa0318070:intron 20.0%
!! GGATAAAAACATTATAGATA+AGG + chr2_4:16377769-16377788 None:intergenic 20.0%
!! ATAAGAGAGATTGAATATTT+GGG - chr2_4:16377816-16377835 Msa0318070:intron 20.0%
!! GTTAATTGAATAGTATAATG+AGG - chr2_4:16378014-16378033 Msa0318070:intron 20.0%
!! AAATCAGAACATTTATTTGT+AGG - chr2_4:16378160-16378179 Msa0318070:intron 20.0%
!! AACTTCTTAATATCTATTTC+AGG - chr2_4:16378434-16378453 Msa0318070:intron 20.0%
!! GTCTCTTATGTTATTATATA+TGG - chr2_4:16378965-16378984 Msa0318070:CDS 20.0%
!! AATATTTGTTCTATCAAACA+CGG - chr2_4:16379130-16379149 Msa0318070:intron 20.0%
! TACACAATATTGACAAATAG+CGG - chr2_4:16376155-16376174 Msa0318070:CDS 25.0%
!! CTTCATAATCACATTCATTT+TGG + chr2_4:16376535-16376554 None:intergenic 25.0%
! ACAATATTGCTAATTTCAGA+CGG + chr2_4:16376704-16376723 None:intergenic 25.0%
! AAAGATGCAGAAAAACAAAA+TGG - chr2_4:16376794-16376813 Msa0318070:intron 25.0%
! CATTGGATTTATGAATTGTA+TGG - chr2_4:16376989-16377008 Msa0318070:intron 25.0%
!! TATTAAGAAGTGTGTTGAAT+TGG - chr2_4:16377186-16377205 Msa0318070:CDS 25.0%
! TTAAATAGCAGTACATGTAA+AGG + chr2_4:16377557-16377576 None:intergenic 25.0%
!! GCTATTTAATTTCACGAATA+TGG - chr2_4:16377568-16377587 Msa0318070:intron 25.0%
!! ATTTAATTTCACGAATATGG+AGG - chr2_4:16377571-16377590 Msa0318070:intron 25.0%
! GATAAGAGAGATTGAATATT+TGG - chr2_4:16377815-16377834 Msa0318070:intron 25.0%
! TAAGAGAGATTGAATATTTG+GGG - chr2_4:16377817-16377836 Msa0318070:intron 25.0%
! TGTTGTCATTACAAAATATG+AGG - chr2_4:16377986-16378005 Msa0318070:intron 25.0%
! AATTGAATAGTATAATGAGG+TGG - chr2_4:16378017-16378036 Msa0318070:intron 25.0%
!! AAGTCTTGTATAAATGAAAG+AGG + chr2_4:16378196-16378215 None:intergenic 25.0%
! AAAATTGGAGATGTTAAAGA+AGG - chr2_4:16378570-16378589 Msa0318070:intron 25.0%
!!! ACAATATTATGCTTTAGAGT+AGG + chr2_4:16378649-16378668 None:intergenic 25.0%
! GTGTTTATATTTAGACACTT+CGG - chr2_4:16378733-16378752 Msa0318070:intron 25.0%
!!! TTAGACTTTGAAATTTGAGT+AGG - chr2_4:16378856-16378875 Msa0318070:CDS 25.0%
! ATATAATAACATAAGAGACC+TGG + chr2_4:16378964-16378983 None:intergenic 25.0%
! GTAAATAGAATATATTCCAG+TGG - chr2_4:16378990-16379009 Msa0318070:CDS 25.0%
! GCACAATTGAAAAATTACAA+TGG - chr2_4:16379041-16379060 Msa0318070:CDS 25.0%
! AGTAAAACAAAATTAACCTG+TGG - chr2_4:16379106-16379125 Msa0318070:CDS 25.0%
!! AGTCAAATTAAAGGTATGTT+TGG + chr2_4:16379216-16379235 None:intergenic 25.0%
! AAACTAATCGACGAATTTAT+CGG + chr2_4:16379452-16379471 None:intergenic 25.0%
AGTTGATTGAGAAAATTAGG+CGG - chr2_4:16375163-16375182 Msa0318070:three_prime_UTR 30.0%
!!! CATTTTGATTGGTGAAGAAT+GGG + chr2_4:16375345-16375364 None:intergenic 30.0%
!!! TCATTTTGATTGGTGAAGAA+TGG + chr2_4:16375346-16375365 None:intergenic 30.0%
! AAACGGTTACTTACTTGTTA+GGG + chr2_4:16375414-16375433 None:intergenic 30.0%
TAAACGGTTACTTACTTGTT+AGG + chr2_4:16375415-16375434 None:intergenic 30.0%
TAACAAGTAAGTAACCGTTT+AGG - chr2_4:16375414-16375433 Msa0318070:three_prime_UTR 30.0%
AACAAGTAAGTAACCGTTTA+GGG - chr2_4:16375415-16375434 Msa0318070:three_prime_UTR 30.0%
ACATGATGATAAACCCTAAA+CGG + chr2_4:16375431-16375450 None:intergenic 30.0%
GTAGATGAAAGCAAAATGAT+TGG - chr2_4:16375584-16375603 Msa0318070:three_prime_UTR 30.0%
!! TAAACTCATTGGTGTTTTCA+TGG - chr2_4:16375616-16375635 Msa0318070:three_prime_UTR 30.0%
!!! TTAGACCTCATTTTTTTGCA+CGG - chr2_4:16375702-16375721 Msa0318070:three_prime_UTR 30.0%
TAAACAACTAATTGACAGTC+TGG + chr2_4:16375832-16375851 None:intergenic 30.0%
TTGTGAAGGTTTGTCAATTA+CGG - chr2_4:16375855-16375874 Msa0318070:three_prime_UTR 30.0%
!!! CGTTTAGATCACCTTATTTT+CGG + chr2_4:16375939-16375958 None:intergenic 30.0%
ATCTAAACGTAACTTCTGAT+AGG - chr2_4:16375950-16375969 Msa0318070:three_prime_UTR 30.0%
TTGCCAGAATAGCAATTATT+TGG - chr2_4:16376255-16376274 Msa0318070:intron 30.0%
! TTGCCAAATAATTGCTATTC+TGG + chr2_4:16376261-16376280 None:intergenic 30.0%
ACCATATTGCGAAACAATAT+AGG - chr2_4:16376296-16376315 Msa0318070:CDS 30.0%
CCATATTGCGAAACAATATA+GGG - chr2_4:16376297-16376316 Msa0318070:CDS 30.0%
! TATGAAGAAGTTGCTTTATG+TGG - chr2_4:16376548-16376567 Msa0318070:intron 30.0%
GCTTTATGTGGTATGTTAAT+TGG - chr2_4:16376560-16376579 Msa0318070:intron 30.0%
! TTTTTCTGCATCTTTGTAGT+AGG + chr2_4:16376789-16376808 None:intergenic 30.0%
!!! GCATTAACTGTTTTTTTGTG+TGG - chr2_4:16376876-16376895 Msa0318070:intron 30.0%
! ACTTTTGAACTGGATGAATA+TGG + chr2_4:16376913-16376932 None:intergenic 30.0%
! AACGTAACAAACTTTTGAAC+TGG + chr2_4:16376923-16376942 None:intergenic 30.0%
CATTGTCTAGTTAAAATCCA+AGG + chr2_4:16376950-16376969 None:intergenic 30.0%
!!! CTTGGATTTTAACTAGACAA+TGG - chr2_4:16376948-16376967 Msa0318070:intron 30.0%
TTGTAGAAGCAAAATACTTC+TGG - chr2_4:16377029-16377048 Msa0318070:intron 30.0%
! ACCATAATTAGGAGAACTTT+TGG - chr2_4:16377075-16377094 Msa0318070:intron 30.0%
TCCAAAAGTTCTCCTAATTA+TGG + chr2_4:16377079-16377098 None:intergenic 30.0%
TGGGAGAATTCATAATATCT+TGG + chr2_4:16377381-16377400 None:intergenic 30.0%
! TTTTGTCATGTTTGAATCCT+TGG + chr2_4:16377500-16377519 None:intergenic 30.0%
TTCAAACATGACAAAAGATG+AGG - chr2_4:16377504-16377523 Msa0318070:intron 30.0%
AAGAGAGATTGAATATTTGG+GGG - chr2_4:16377818-16377837 Msa0318070:intron 30.0%
CTGCTTAGCTAGATATTATA+TGG - chr2_4:16378089-16378108 Msa0318070:intron 30.0%
AAAACTAAATAGGCAATAGC+TGG + chr2_4:16378139-16378158 None:intergenic 30.0%
TCATTTATACAAGACTTCAG+TGG - chr2_4:16378199-16378218 Msa0318070:intron 30.0%
! TTGACTATTCGAATCTCTTT+TGG + chr2_4:16378245-16378264 None:intergenic 30.0%
CAAGTATATTCTTCGAATTG+AGG - chr2_4:16378262-16378281 Msa0318070:intron 30.0%
AGGTGTAAATGCATCTTTAA+GGG + chr2_4:16378309-16378328 None:intergenic 30.0%
CGATTGTAACATCAAAAGTT+AGG - chr2_4:16378810-16378829 Msa0318070:intron 30.0%
GATAGAACAAATATTACCAC+AGG + chr2_4:16379125-16379144 None:intergenic 30.0%
! TAAAGGTATGTTTGGTTAGA+GGG + chr2_4:16379208-16379227 None:intergenic 30.0%
! TTAAAGGTATGTTTGGTTAG+AGG + chr2_4:16379209-16379228 None:intergenic 30.0%
! TTTCAGTTGGTGCAAAAAAA+GGG + chr2_4:16379248-16379267 None:intergenic 30.0%
! ATTTCAGTTGGTGCAAAAAA+AGG + chr2_4:16379249-16379268 None:intergenic 30.0%
CTATGTGTGTAAATTTCAGT+TGG + chr2_4:16379261-16379280 None:intergenic 30.0%
TCTGATTATTGCAAGAACTG+GGG + chr2_4:16375208-16375227 None:intergenic 35.0%
CTCTGATTATTGCAAGAACT+GGG + chr2_4:16375209-16375228 None:intergenic 35.0%
TCTCTGATTATTGCAAGAAC+TGG + chr2_4:16375210-16375229 None:intergenic 35.0%
GATGAAGAAGAAGAGATGAA+AGG + chr2_4:16375311-16375330 None:intergenic 35.0%
!! GGAAGTGAAGTCATTTTGAT+TGG + chr2_4:16375356-16375375 None:intergenic 35.0%
! ACTTGTTAGGGTTTGAAGTT+TGG + chr2_4:16375402-16375421 None:intergenic 35.0%
! TTTGAAGCAACGTAGTTACA+GGG + chr2_4:16375539-16375558 None:intergenic 35.0%
GGAGTTTGTGATAAACTCAT+TGG - chr2_4:16375605-16375624 Msa0318070:three_prime_UTR 35.0%
ATAAACCTACTCCAACTGAT+TGG - chr2_4:16375642-16375661 Msa0318070:three_prime_UTR 35.0%
!!! TGTTAGCTTTTAGCAGAGAA+TGG - chr2_4:16375672-16375691 Msa0318070:three_prime_UTR 35.0%
TTACACCGTGCAAAAAAATG+AGG + chr2_4:16375710-16375729 None:intergenic 35.0%
! AGTAGCTTTTCCTTCAAAAC+AGG + chr2_4:16375758-16375777 None:intergenic 35.0%
TTAGTTGTTTAGCGTTGTGA+AGG - chr2_4:16375841-16375860 Msa0318070:three_prime_UTR 35.0%
CAATTACGGATAATAGCAGT+TGG - chr2_4:16375869-16375888 Msa0318070:three_prime_UTR 35.0%
AGACAAACTGCTCAACAAAA+AGG - chr2_4:16375913-16375932 Msa0318070:three_prime_UTR 35.0%
CAACAAAAAGGCCGAAAATA+AGG - chr2_4:16375925-16375944 Msa0318070:three_prime_UTR 35.0%
CCCTATATTGTTTCGCAATA+TGG + chr2_4:16376300-16376319 None:intergenic 35.0%
!! CAAAGGTGCTATATAGAGTA+TGG + chr2_4:16376336-16376355 None:intergenic 35.0%
TATACATAGCAGAGCTACAA+AGG + chr2_4:16376353-16376372 None:intergenic 35.0%
! TTTGTAGCTCTGCTATGTAT+AGG - chr2_4:16376352-16376371 Msa0318070:CDS 35.0%
! TAGTTGTCGTTTCAAACACT+TGG - chr2_4:16376448-16376467 Msa0318070:intron 35.0%
! AGTTGTCGTTTCAAACACTT+GGG - chr2_4:16376449-16376468 Msa0318070:intron 35.0%
TCAGAGACATAATGATCTTC+TGG - chr2_4:16376661-16376680 Msa0318070:intron 35.0%
TCTTCTGGATGTAATCAGAA+AGG - chr2_4:16376676-16376695 Msa0318070:intron 35.0%
!! AGTTTGTTACGTTTCTTCCT+TGG - chr2_4:16376930-16376949 Msa0318070:intron 35.0%
! TAGACAATGGTGCTTTTCAA+TGG - chr2_4:16376961-16376980 Msa0318070:intron 35.0%
! GCTTTTCAATGGTTGAACAT+TGG - chr2_4:16376972-16376991 Msa0318070:intron 35.0%
ATTGTCTTTGTTAAGCTGTG+TGG - chr2_4:16377100-16377119 Msa0318070:intron 35.0%
TGACATCTAGCAGATGATAT+TGG + chr2_4:16377164-16377183 None:intergenic 35.0%
TGAAAAGAACTGACAAAGCT+TGG - chr2_4:16377274-16377293 Msa0318070:CDS 35.0%
GAAAAGAACTGACAAAGCTT+GGG - chr2_4:16377275-16377294 Msa0318070:CDS 35.0%
AAAAGAACTGACAAAGCTTG+GGG - chr2_4:16377276-16377295 Msa0318070:CDS 35.0%
CAAATTGTCTATCTTCCTAC+AGG + chr2_4:16377416-16377435 None:intergenic 35.0%
CTGTAGGAAGATAGACAATT+TGG - chr2_4:16377414-16377433 Msa0318070:intron 35.0%
! AAAAGAACTTGATTCGACAC+TGG - chr2_4:16377444-16377463 Msa0318070:intron 35.0%
! TATTGATGATCACCAAAGCT+TGG - chr2_4:16377467-16377486 Msa0318070:intron 35.0%
! ATTGATGATCACCAAAGCTT+GGG - chr2_4:16377468-16377487 Msa0318070:intron 35.0%
GTAAAATTTATGGTCACCTC+AGG - chr2_4:16377526-16377545 Msa0318070:intron 35.0%
ATTTCACGAATATGGAGGAT+AGG - chr2_4:16377576-16377595 Msa0318070:intron 35.0%
TTTCACGAATATGGAGGATA+GGG - chr2_4:16377577-16377596 Msa0318070:intron 35.0%
CACCATTGCAGCATAATTTA+TGG - chr2_4:16377721-16377740 Msa0318070:intron 35.0%
TGCCATAAATTATGCTGCAA+TGG + chr2_4:16377726-16377745 None:intergenic 35.0%
TACGCTTACTCAAAAACTCA+AGG - chr2_4:16377869-16377888 Msa0318070:CDS 35.0%
ACGCTTACTCAAAAACTCAA+GGG - chr2_4:16377870-16377889 Msa0318070:CDS 35.0%
! GTAGGTTTGTTTAATGGACA+AGG + chr2_4:16378052-16378071 None:intergenic 35.0%
! GAATGCGTAGGTTTGTTTAA+TGG + chr2_4:16378058-16378077 None:intergenic 35.0%
TTAAACAAACCTACGCATTC+AGG - chr2_4:16378058-16378077 Msa0318070:intron 35.0%
CAGGTGTAAATGCATCTTTA+AGG + chr2_4:16378310-16378329 None:intergenic 35.0%
CTTAAAGATGCATTTACACC+TGG - chr2_4:16378308-16378327 Msa0318070:intron 35.0%
AGAACTTGAAGGAAACAATG+AGG - chr2_4:16378334-16378353 Msa0318070:intron 35.0%
CTCGAAATTGAATTCAGTTG+TGG - chr2_4:16378410-16378429 Msa0318070:intron 35.0%
GCTTATCATTTGAGCAAAGA+AGG - chr2_4:16378499-16378518 Msa0318070:intron 35.0%
!! TACTAAACTTAGTCTTGACC+AGG - chr2_4:16378943-16378962 Msa0318070:CDS 35.0%
! AAAGGTATGTTTGGTTAGAG+GGG + chr2_4:16379207-16379226 None:intergenic 35.0%
! TTTTATACAGGTTCGAACCT+AGG + chr2_4:16379293-16379312 None:intergenic 35.0%
AGGTTCGAACCTGTATAAAA+AGG - chr2_4:16379293-16379312 Msa0318070:CDS 35.0%
GGTTCGAACCTGTATAAAAA+GGG - chr2_4:16379294-16379313 Msa0318070:CDS 35.0%
! GACTAAAGCCCTTTTTATAC+AGG + chr2_4:16379305-16379324 None:intergenic 35.0%
TTGAATTGCCCATTTCAACT+AGG - chr2_4:16379424-16379443 Msa0318070:five_prime_UTR 35.0%
!! TATCGGTTCCTAGTTGAAAT+GGG + chr2_4:16379435-16379454 None:intergenic 35.0%
!! TTATCGGTTCCTAGTTGAAA+TGG + chr2_4:16379436-16379455 None:intergenic 35.0%
TGATTGAGAAAATTAGGCGG+AGG - chr2_4:16375166-16375185 Msa0318070:three_prime_UTR 40.0%
CAGAATCGAAACTCACTTGA+TGG - chr2_4:16375241-16375260 Msa0318070:intron 40.0%
GAAGAAGAGATGAAAGGTGA+TGG + chr2_4:16375305-16375324 None:intergenic 40.0%
AAAGAGACGAAGCGAGAAAA+GGG + chr2_4:16375377-16375396 None:intergenic 40.0%
! GTTTGAAGCAACGTAGTTAC+AGG + chr2_4:16375540-16375559 None:intergenic 40.0%
AGATAATGCTTCGAGTGATG+TGG - chr2_4:16375562-16375581 Msa0318070:three_prime_UTR 40.0%
AACAACCTTCTCCAATCAGT+TGG + chr2_4:16375656-16375675 None:intergenic 40.0%
!! TGAGACTGATCCTGTTTTGA+AGG - chr2_4:16375745-16375764 Msa0318070:three_prime_UTR 40.0%
AGCAGTTGGAAATTGCTCTA+TGG - chr2_4:16375883-16375902 Msa0318070:three_prime_UTR 40.0%
GCAGTTGGAAATTGCTCTAT+GGG - chr2_4:16375884-16375903 Msa0318070:three_prime_UTR 40.0%
TTGTTGAGCAGTTTGTCTGT+GGG + chr2_4:16375911-16375930 None:intergenic 40.0%
TTTGTTGAGCAGTTTGTCTG+TGG + chr2_4:16375912-16375931 None:intergenic 40.0%
CGTAACTTCTGATAGGTTTG+TGG - chr2_4:16375957-16375976 Msa0318070:three_prime_UTR 40.0%
GCAATTTCCATAGCAGTTTG+TGG - chr2_4:16376041-16376060 Msa0318070:CDS 40.0%
! TATTTTTCGCGATCCACGAT+TGG - chr2_4:16376227-16376246 Msa0318070:intron 40.0%
TGCTCTTGTGTAGATTGATG+AGG - chr2_4:16376634-16376653 Msa0318070:intron 40.0%
TGTAAAATCCTTCCTACGCT+TGG + chr2_4:16376729-16376748 None:intergenic 40.0%
ACATGTAAAGGAAAGTCCTG+AGG + chr2_4:16377545-16377564 None:intergenic 40.0%
TACACTGCAATGCAACAAAG+TGG - chr2_4:16377630-16377649 Msa0318070:intron 40.0%
GCAATGCAACAAAGTGGATA+AGG - chr2_4:16377636-16377655 Msa0318070:intron 40.0%
ATTATGCTGCAATGGTGTGT+TGG + chr2_4:16377718-16377737 None:intergenic 40.0%
TTCAAAAACTAAGCATGGGC+AGG + chr2_4:16377790-16377809 None:intergenic 40.0%
!! TGCCCATGCTTAGTTTTTGA+AGG - chr2_4:16377789-16377808 Msa0318070:intron 40.0%
!! GCCCATGCTTAGTTTTTGAA+GGG - chr2_4:16377790-16377809 Msa0318070:intron 40.0%
CCCCTTCAAAAACTAAGCAT+GGG + chr2_4:16377794-16377813 None:intergenic 40.0%
!! CCCATGCTTAGTTTTTGAAG+GGG - chr2_4:16377791-16377810 Msa0318070:intron 40.0%
TCCCCTTCAAAAACTAAGCA+TGG + chr2_4:16377795-16377814 None:intergenic 40.0%
GGGAAAATAACAAGCAAACG+AGG - chr2_4:16377838-16377857 Msa0318070:CDS 40.0%
! TTTCCTTCAAGTTCTTCTCC+AGG + chr2_4:16378329-16378348 None:intergenic 40.0%
!! CAAAGAAGGTACCCTCATTA+GGG - chr2_4:16378513-16378532 Msa0318070:intron 40.0%
TCCAGAGATCGTCGAAAAAT+TGG - chr2_4:16378555-16378574 Msa0318070:intron 40.0%
!! TCCAATTTTTCGACGATCTC+TGG + chr2_4:16378559-16378578 None:intergenic 40.0%
GGAGATGTTAAAGAAGGTTG+TGG - chr2_4:16378576-16378595 Msa0318070:intron 40.0%
TGTTAAAGAAGGTTGTGGAG+AGG - chr2_4:16378581-16378600 Msa0318070:intron 40.0%
AGAGGAACTTCATGTGAAGA+GGG - chr2_4:16378599-16378618 Msa0318070:intron 40.0%
GAGCAATGCTGTTGTAAATC+CGG + chr2_4:16378706-16378725 None:intergenic 40.0%
ACAACAGAGTAAGCTGAATC+AGG - chr2_4:16378765-16378784 Msa0318070:intron 40.0%
AATTGCAGAACAACCTGAAG+AGG - chr2_4:16379158-16379177 Msa0318070:intron 40.0%
ACAACCTGAAGAGGTAAAAG+AGG - chr2_4:16379167-16379186 Msa0318070:intron 40.0%
GATGGAAGAGAAGAACGCAA+CGG + chr2_4:16375287-16375306 None:intergenic 45.0%
!! GGTGAAGAATGGGTTGAATG+AGG + chr2_4:16375335-16375354 None:intergenic 45.0%
GAAAGAGACGAAGCGAGAAA+AGG + chr2_4:16375378-16375397 None:intergenic 45.0%
CTTCTCCAATCAGTTGGAGT+AGG + chr2_4:16375650-16375669 None:intergenic 45.0%
CTACTCCAACTGATTGGAGA+AGG - chr2_4:16375648-16375667 Msa0318070:three_prime_UTR 45.0%
TGTTGAGCAGTTTGTCTGTG+GGG + chr2_4:16375910-16375929 None:intergenic 45.0%
TTCTGATAGGTTTGTGGCGT+TGG - chr2_4:16375963-16375982 Msa0318070:three_prime_UTR 45.0%
TCTGATAGGTTTGTGGCGTT+GGG - chr2_4:16375964-16375983 Msa0318070:three_prime_UTR 45.0%
AGGTGTGGTCTGATAAATCG+AGG - chr2_4:16375987-16376006 Msa0318070:three_prime_UTR 45.0%
GGTGTGGTCTGATAAATCGA+GGG - chr2_4:16375988-16376007 Msa0318070:three_prime_UTR 45.0%
GTGTGGTCTGATAAATCGAG+GGG - chr2_4:16375989-16376008 Msa0318070:three_prime_UTR 45.0%
CGCTATACCACAAACTGCTA+TGG + chr2_4:16376051-16376070 None:intergenic 45.0%
CTCTCGTAGACAAGCATTTG+TGG - chr2_4:16376499-16376518 Msa0318070:intron 45.0%
TCGTAGACAAGCATTTGTGG+TGG - chr2_4:16376502-16376521 Msa0318070:intron 45.0%
GCAATATTGTCTCCAAGCGT+AGG - chr2_4:16376714-16376733 Msa0318070:intron 45.0%
TATTGTCTCCAAGCGTAGGA+AGG - chr2_4:16376718-16376737 Msa0318070:intron 45.0%
GCTTTCTGTAGCACCATCAT+AGG + chr2_4:16377326-16377345 None:intergenic 45.0%
! CTAATGTAGCTTGCGAGTAG+TGG + chr2_4:16377915-16377934 None:intergenic 45.0%
GAATACGATCCTGAATGCGT+AGG + chr2_4:16378070-16378089 None:intergenic 45.0%
TCTTCGAATTGAGGATCCTG+AGG - chr2_4:16378271-16378290 Msa0318070:intron 45.0%
ACACCTGGAGAAGAACTTGA+AGG - chr2_4:16378323-16378342 Msa0318070:intron 45.0%
TCACACGTGGATAAAGACTG+TGG - chr2_4:16378471-16378490 Msa0318070:intron 45.0%
!! GCAAAGAAGGTACCCTCATT+AGG - chr2_4:16378512-16378531 Msa0318070:intron 45.0%
TACCCTCATTAGGGAAGCAA+GGG - chr2_4:16378522-16378541 Msa0318070:intron 45.0%
ATCCCTTGCTTCCCTAATGA+GGG + chr2_4:16378527-16378546 None:intergenic 45.0%
GAGAGGAACTTCATGTGAAG+AGG - chr2_4:16378598-16378617 Msa0318070:intron 45.0%
GAACTTCATGTGAAGAGGGT+GGG - chr2_4:16378603-16378622 Msa0318070:intron 45.0%
AGAGGGTGGGAAACATACTA+AGG - chr2_4:16378616-16378635 Msa0318070:intron 45.0%
ATGTCCATCAAGTGCAGATC+CGG - chr2_4:16378684-16378703 Msa0318070:intron 45.0%
AAATCCGGATCTGCACTTGA+TGG + chr2_4:16378691-16378710 None:intergenic 45.0%
!! CGATTGTGTCATTTGCACGT+GGG - chr2_4:16378879-16378898 Msa0318070:CDS 45.0%
CGTGGGAGTGAAATGTTACA+TGG - chr2_4:16378896-16378915 Msa0318070:CDS 45.0%
TTCCTCAGCCTTCAAAGACA+TGG + chr2_4:16379016-16379035 None:intergenic 45.0%
! TTGGCCTCTTTTACCTCTTC+AGG + chr2_4:16379174-16379193 None:intergenic 45.0%
AGAGGTAAAAGAGGCCAACA+AGG - chr2_4:16379176-16379195 Msa0318070:intron 45.0%
ACACATAGCTGTCAGATCCT+AGG - chr2_4:16379273-16379292 Msa0318070:CDS 45.0%
GGGCATTTGAGCAAACACGA+GGG - chr2_4:16376009-16376028 Msa0318070:three_prime_UTR 50.0%
TCTGGCAATGTTGCCAATCG+TGG + chr2_4:16376243-16376262 None:intergenic 50.0%
GCTGCTGTACAAGCCTATGA+TGG - chr2_4:16377310-16377329 Msa0318070:CDS 50.0%
CTACAGGCAGCATCAAGTGT+GGG + chr2_4:16377400-16377419 None:intergenic 50.0%
ATCCACGTGTGAAGCTTCTC+TGG + chr2_4:16378463-16378482 None:intergenic 50.0%
GTACCCTCATTAGGGAAGCA+AGG - chr2_4:16378521-16378540 Msa0318070:intron 50.0%
GATCCCTTGCTTCCCTAATG+AGG + chr2_4:16378528-16378547 None:intergenic 50.0%
GGAACTTCATGTGAAGAGGG+TGG - chr2_4:16378602-16378621 Msa0318070:intron 50.0%
GGGTGGGAAACATACTAAGG+TGG - chr2_4:16378619-16378638 Msa0318070:intron 50.0%
!! GCGATTGTGTCATTTGCACG+TGG - chr2_4:16378878-16378897 Msa0318070:CDS 50.0%
TCCAGTGGCCATGTCTTTGA+AGG - chr2_4:16379005-16379024 Msa0318070:CDS 50.0%
GGTATGTTTGGTTAGAGGGG+TGG + chr2_4:16379204-16379223 None:intergenic 50.0%
AAAAGCTACTCCGTCTCGCG+AGG - chr2_4:16375768-16375787 Msa0318070:three_prime_UTR 55.0%
CTTTGAGCTTCCTCGCGAGA+CGG + chr2_4:16375781-16375800 None:intergenic 55.0%
TCTCGCGAGGAAGCTCAAAG+AGG - chr2_4:16375781-16375800 Msa0318070:three_prime_UTR 55.0%
! GATAGGTTTGTGGCGTTGGG+AGG - chr2_4:16375967-16375986 Msa0318070:three_prime_UTR 55.0%
! GGGGCATTTGAGCAAACACG+AGG - chr2_4:16376008-16376027 Msa0318070:three_prime_UTR 55.0%
CCTACAGGCAGCATCAAGTG+TGG + chr2_4:16377401-16377420 None:intergenic 55.0%
CCACACTTGATGCTGCCTGT+AGG - chr2_4:16377398-16377417 Msa0318070:intron 55.0%
GGATCCTGAGGAGCAACTGT+CGG - chr2_4:16378283-16378302 Msa0318070:intron 55.0%
CACCAGAGAAGCTTCACACG+TGG - chr2_4:16378458-16378477 Msa0318070:intron 55.0%
GCCTTCAAAGACATGGCCAC+TGG + chr2_4:16379009-16379028 None:intergenic 55.0%
! GGCCATGTCTTTGAAGGCTG+AGG - chr2_4:16379011-16379030 Msa0318070:CDS 55.0%
! TTAGAGGGGTGGAGCCTTGT+TGG + chr2_4:16379193-16379212 None:intergenic 55.0%
! GTTTGTGGCGTTGGGAGGTG+TGG - chr2_4:16375972-16375991 Msa0318070:three_prime_UTR 60.0%
CTTGGCAGCAGCCCAAGCTT+TGG + chr2_4:16377482-16377501 None:intergenic 60.0%
CAAAGCTTGGGCTGCTGCCA+AGG - chr2_4:16377480-16377499 Msa0318070:intron 60.0%
AGGGCCGACAGTTGCTCCTC+AGG + chr2_4:16378290-16378309 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 16375159 16379485 16375159 ID=Msa0318070;Name=Msa0318070
chr2_4 mRNA 16375159 16379485 16375159 ID=Msa0318070-mRNA-1;Parent=Msa0318070;Name=Msa0318070-mRNA-1;_AED=0.06;_eAED=0.06;_QI=101|1|1|1|0.83|0.71|7|804|401
chr2_4 exon 16375159 16375194 16375159 ID=Msa0318070-mRNA-1:exon:6118;Parent=Msa0318070-mRNA-1
chr2_4 exon 16375261 16376188 16375261 ID=Msa0318070-mRNA-1:exon:6117;Parent=Msa0318070-mRNA-1
chr2_4 exon 16376275 16376462 16376275 ID=Msa0318070-mRNA-1:exon:6116;Parent=Msa0318070-mRNA-1
chr2_4 exon 16377119 16377363 16377119 ID=Msa0318070-mRNA-1:exon:6115;Parent=Msa0318070-mRNA-1
chr2_4 exon 16377829 16377997 16377829 ID=Msa0318070-mRNA-1:exon:6114;Parent=Msa0318070-mRNA-1
chr2_4 exon 16378842 16379125 16378842 ID=Msa0318070-mRNA-1:exon:6113;Parent=Msa0318070-mRNA-1
chr2_4 exon 16379225 16379485 16379225 ID=Msa0318070-mRNA-1:exon:6112;Parent=Msa0318070-mRNA-1
chr2_4 five_prime_UTR 16379385 16379485 16379385 ID=Msa0318070-mRNA-1:five_prime_utr;Parent=Msa0318070-mRNA-1
chr2_4 CDS 16379225 16379384 16379225 ID=Msa0318070-mRNA-1:cds;Parent=Msa0318070-mRNA-1
chr2_4 CDS 16378842 16379125 16378842 ID=Msa0318070-mRNA-1:cds;Parent=Msa0318070-mRNA-1
chr2_4 CDS 16377829 16377997 16377829 ID=Msa0318070-mRNA-1:cds;Parent=Msa0318070-mRNA-1
chr2_4 CDS 16377119 16377363 16377119 ID=Msa0318070-mRNA-1:cds;Parent=Msa0318070-mRNA-1
chr2_4 CDS 16376275 16376462 16376275 ID=Msa0318070-mRNA-1:cds;Parent=Msa0318070-mRNA-1
chr2_4 CDS 16376029 16376188 16376029 ID=Msa0318070-mRNA-1:cds;Parent=Msa0318070-mRNA-1
chr2_4 three_prime_UTR 16375261 16376028 16375261 ID=Msa0318070-mRNA-1:three_prime_utr;Parent=Msa0318070-mRNA-1
chr2_4 three_prime_UTR 16375159 16375194 16375159 ID=Msa0318070-mRNA-1:three_prime_utr;Parent=Msa0318070-mRNA-1
Gene Sequence

>Msa0318070

ATGGAGTTACACACTTCAATTCTACCGTTGCGTTCTTCTCTTCCATCACCTTTCATCTCTTCTTCTTCATCACCTCATTCAACCCATTCTTCACCAATCAAAATGACTTCACTTCCCTTTTCTCGCTTCGTCTCTTTCACCAAACTTCAAACCCTAACAAGACGAAGAAGTTTACAACCCTGTAACTACGTTGCTTCAAACGAAGATAATGCTTCGAGTGATGTGGTAGATGAAAGCAAAATGATTGGAGTTTGTGATAAACTCATTGGTGTTTTCATGGTTGATAAACCTACTCCAACTGATTGGAGAAGGTTGTTAGCTTTTAGCAGAGAATGGAATAACATTAGACCTCATTTTTTTGCACGGTGTAACGATAAAGCAGTTTCTGAGACTGATCCTGTTTTGAAGGAAAAGCTACTCCGTCTCGCGAGGAAGCTCAAAGAGATTGATGAGGATGTTCAGAGACATAATGATCTTCTGGATGTAATCAGAAAGGATCCGTCTGAAATTAGCAATATTGTCTCCAAGCGTAGGAAGGATTTTACAAATGAATTCTTTGAGCATCTTCACACAGTGACTCAGTCCTACTACAAAGATGCAGAAAAACAAAATGAACTGACAAAGCTTGGGGAAGCATGCTTTGCTGCTGTACAAGCCTATGATGGTGCTACAGAAAGCATTGAGCAGATAAATGCTGCACAGCTGAAGTTCCAAGATATTATGAATTCTCCCACACTTGATGCTGCCTGTAGGAAGATAGACAATTTGGCTGAAAAAAAAGAACTTGATTCGACACTGGTATTGATGATCACCAAAGCTTGGGCTGCTGCCAAGGATTCAAACATGACAAAAGATGAGGTAAAAGACATCCTCTTTCATTTATACAAGACTTCAGTGGCAAATCTTCAGAGACTCGTTCCAAAAGAGATTCGAATAGTCAAGTATATTCTTCGAATTGAGGATCCTGAGGAGCAACTGTCGGCCCTTAAAGATGCATTTACACCTGGAGAAGAACTTGAAGGAAACAATGAGGATAGTTTGTACACGACACCAGAGAAGCTTCACACGTGGATAAAGACTGTGGTCGATGCTTATCATTTGAGCAAAGAAGGTACCCTCATTAGGGAAGCAAGGGATCTGTTGAATCCAGAGATCGTCGAAAAATTGGAGATGTTAAAGAAGGTTGTGGAGAGGAACTTCATGTGA

Protein sequence

>Msa0318070

MELHTSILPLRSSLPSPFISSSSSPHSTHSSPIKMTSLPFSRFVSFTKLQTLTRRRSLQPCNYVASNEDNASSDVVDESKMIGVCDKLIGVFMVDKPTPTDWRRLLAFSREWNNIRPHFFARCNDKAVSETDPVLKEKLLRLARKLKEIDEDVQRHNDLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHTVTQSYYKDAEKQNELTKLGEACFAAVQAYDGATESIEQINAAQLKFQDIMNSPTLDAACRKIDNLAEKKELDSTLVLMITKAWAAAKDSNMTKDEVKDILFHLYKTSVANLQRLVPKEIRIVKYILRIEDPEEQLSALKDAFTPGEELEGNNEDSLYTTPEKLHTWIKTVVDAYHLSKEGTLIREARDLLNPEIVEKLEMLKKVVERNFM*