AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0278670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0278670 MtrunA17_Chr2g0291781 96.278 403 13 1 1 401 1 403 0.0 797
Msa0278670 MtrunA17_Chr5g0411611 44.083 338 188 1 64 401 67 403 4.45e-107 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0278670 AT1G36320.1 65.672 335 114 1 68 401 80 414 5.42e-170 482
Msa0278670 AT4G37920.1 41.979 374 206 3 38 401 30 402 1.05e-106 321

Find 121 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTTATGTTATTATATA+TGG 0.164573 2_3:+11751961 Msa0278670:three_prime_UTR
TTGACTATTCGAATCTCTTT+TGG 0.215665 2_3:-11751238 None:intergenic
AGGTTCGAACTTGTATAAAA+AGG 0.218994 2_3:+11752289 Msa0278670:three_prime_UTR
AAAAGTTGATTGAGAAAATT+AGG 0.244374 2_3:+11748156 Msa0278670:five_prime_UTR
TAAACGGTTACTTACTTGTT+AGG 0.266740 2_3:-11748408 None:intergenic
TTAAAGGTATGTTTGGTTAG+AGG 0.276102 2_3:-11752202 None:intergenic
GTTTGAAGCAACGTAGTTAC+AGG 0.303663 2_3:-11748533 None:intergenic
TTAGAGGGGTGGAGCCTTGT+TGG 0.314409 2_3:-11752186 None:intergenic
TCAGAGACATAATGATCTTC+TGG 0.332215 2_3:+11749657 Msa0278670:CDS
GCAAAGAAGGTACCCTCATT+AGG 0.337516 2_3:+11751508 Msa0278670:CDS
CAGGTGTAAATGCATCTTTA+AGG 0.342122 2_3:-11751303 None:intergenic
ACTTGTTAGGGTTTGAAGTT+TGG 0.344170 2_3:-11748395 None:intergenic
AAACTAATCGACGAATTTAT+CGG 0.344840 2_3:-11752445 None:intergenic
TCTCTGATTATTGCAAGAAC+TGG 0.349527 2_3:-11748203 None:intergenic
GCTTTCTGTAGCACCATCAT+AGG 0.351747 2_3:-11750319 None:intergenic
AGTCAAATTAAAGGTATGTT+TGG 0.365988 2_3:-11752209 None:intergenic
ATAAAACTAAGTCAAATTAA+AGG 0.368230 2_3:-11752218 None:intergenic
CTGTAGGAAGATAGACAATT+TGG 0.372225 2_3:+11750410 Msa0278670:CDS
CTCTGATTATTGCAAGAACT+GGG 0.395224 2_3:-11748202 None:intergenic
CGATTGTAACATCAAAAGTT+AGG 0.397051 2_3:+11751806 Msa0278670:three_prime_UTR
CAGAATCGAAACTCACTTGA+TGG 0.414856 2_3:+11748237 Msa0278670:exon
AGGGCCGACAGTTGCTCCTC+AGG 0.422316 2_3:-11751283 None:intergenic
ACAACAGAGTAAGCTGAATC+AGG 0.428216 2_3:+11751761 Msa0278670:three_prime_UTR
GAGCAATGCTGTTGTAAATC+CGG 0.429390 2_3:-11751699 None:intergenic
ATCCACGTGTGAAGCTTCTC+TGG 0.430758 2_3:-11751456 None:intergenic
TAAAGGTATGTTTGGTTAGA+GGG 0.431025 2_3:-11752201 None:intergenic
TTTCCTTCAAGTTCTTCTCC+AGG 0.433509 2_3:-11751322 None:intergenic
TCCAGTGGCCATGTCTTTGA+AGG 0.438197 2_3:+11752001 Msa0278670:three_prime_UTR
CTTGGCAGCAGCCCAAGCTT+TGG 0.438406 2_3:-11750475 None:intergenic
AAAGAGACGAAGCGAGAAAA+GGG 0.440904 2_3:-11748370 None:intergenic
TGTAAAATCCTTCCTACGCT+TGG 0.442996 2_3:-11749722 None:intergenic
CAAAGAAGGTACCCTCATTA+GGG 0.443898 2_3:+11751509 Msa0278670:CDS
GAAAAGAACTGACAAAGCTT+GGG 0.448005 2_3:+11750271 Msa0278670:intron
CAAAGCTTGGGCTGCTGCCA+AGG 0.449883 2_3:+11750476 Msa0278670:CDS
ATGTCCATCAAGTGCAGATC+CGG 0.453798 2_3:+11751680 Msa0278670:three_prime_UTR
AAATCCGGATCTGCACTTGA+TGG 0.457140 2_3:-11751684 None:intergenic
AGGTGTAAATGCATCTTTAA+GGG 0.459121 2_3:-11751302 None:intergenic
TGGGAGAATTCATAATATCT+TGG 0.459633 2_3:-11750374 None:intergenic
AAACGGTTACTTACTTGTTA+GGG 0.461040 2_3:-11748407 None:intergenic
TGAAAAGAACTGACAAAGCT+TGG 0.461245 2_3:+11750270 Msa0278670:intron
GGAGTTTGTGATAAACTCAT+TGG 0.463713 2_3:+11748601 Msa0278670:CDS
GCTTATCATTTGAGCAAAGA+AGG 0.473294 2_3:+11751495 Msa0278670:CDS
CAAGTATATTCTTCGAATTG+AGG 0.483924 2_3:+11751258 Msa0278670:CDS
AAAATTGGAGATGTTAAAGA+AGG 0.485310 2_3:+11751566 Msa0278670:CDS
GATCCCTTGCTTCCCTAATG+AGG 0.485319 2_3:-11751521 None:intergenic
ATAAACCTACTCCAACTGAT+TGG 0.487355 2_3:+11748638 Msa0278670:CDS
CAAATTGTCTATCTTCCTAC+AGG 0.494659 2_3:-11750409 None:intergenic
GAAAGAGACGAAGCGAGAAA+AGG 0.495170 2_3:-11748371 None:intergenic
GAAGAAGAGATGAAAGGTGA+TGG 0.500445 2_3:-11748298 None:intergenic
TATTGATGATCACCAAAGCT+TGG 0.509925 2_3:+11750463 Msa0278670:CDS
GTAGATGAAAGCAAAATGAT+TGG 0.510508 2_3:+11748580 Msa0278670:CDS
GGAGATGTTAAAGAAGGTTG+TGG 0.513343 2_3:+11751572 Msa0278670:CDS
GCCTTCAAAGACATGGCCAC+TGG 0.514010 2_3:-11752002 None:intergenic
ACACCTGGAGAAGAACTTGA+AGG 0.515259 2_3:+11751319 Msa0278670:CDS
AAAGGTATGTTTGGTTAGAG+GGG 0.520684 2_3:-11752200 None:intergenic
TTAGACTTTGAAATTTGAGT+AGG 0.526622 2_3:+11751852 Msa0278670:three_prime_UTR
ACACATAGCTGTCAGATCCT+AGG 0.530809 2_3:+11752269 Msa0278670:three_prime_UTR
CTTCTCCAATCAGTTGGAGT+AGG 0.530886 2_3:-11748643 None:intergenic
ACAATATTATGCTTTAGAGT+AGG 0.538790 2_3:-11751642 None:intergenic
AACAACCTTCTCCAATCAGT+TGG 0.540025 2_3:-11748649 None:intergenic
GGCCATGTCTTTGAAGGCTG+AGG 0.540772 2_3:+11752007 Msa0278670:three_prime_UTR
AAGTCTTGTATAAATGAAAG+AGG 0.542381 2_3:-11751189 None:intergenic
TTCCTCAGCCTTCAAAGACA+TGG 0.544052 2_3:-11752009 None:intergenic
CTTAAAGATGCATTTACACC+TGG 0.546565 2_3:+11751304 Msa0278670:CDS
GATAGAACAAATATTACCAC+AGG 0.552332 2_3:-11752118 None:intergenic
ATTGATGATCACCAAAGCTT+GGG 0.554729 2_3:+11750464 Msa0278670:CDS
GCTGCTGTACAAGCCTATGA+TGG 0.559521 2_3:+11750306 Msa0278670:CDS
GATGAAGAAGAAGAGATGAA+AGG 0.560274 2_3:-11748304 None:intergenic
CTTTGAGCTTCCTCGCGAGA+CGG 0.562250 2_3:-11748774 None:intergenic
GTGTTTATATTTAGACACTT+CGG 0.565524 2_3:+11751729 Msa0278670:three_prime_UTR
GCAATATTGTCTCCAAGCGT+AGG 0.566012 2_3:+11749710 Msa0278670:CDS
TACCCTCATTAGGGAAGCAA+GGG 0.573700 2_3:+11751518 Msa0278670:CDS
AATTGCAGAACAACCTGAAG+AGG 0.574048 2_3:+11752154 Msa0278670:three_prime_UTR
GTACCCTCATTAGGGAAGCA+AGG 0.574896 2_3:+11751517 Msa0278670:CDS
ACAACCTGAAGAGGTAAAAG+AGG 0.577700 2_3:+11752163 Msa0278670:three_prime_UTR
GGTATGTTTGGTTAGAGGGG+TGG 0.580387 2_3:-11752197 None:intergenic
GAACTTCATGTGAAGAGGGT+GGG 0.580814 2_3:+11751599 Msa0278670:exon
TCTTCTGGATGTAATCAGAA+AGG 0.585049 2_3:+11749672 Msa0278670:CDS
AAAAGCTACTCCGTCTCGCG+AGG 0.586113 2_3:+11748764 Msa0278670:CDS
TATTGTCTCCAAGCGTAGGA+AGG 0.587624 2_3:+11749714 Msa0278670:CDS
ACAATATTGCTAATTTCAGA+CGG 0.590828 2_3:-11749697 None:intergenic
TGATTGAGAAAATTAGGCGG+AGG 0.591066 2_3:+11748162 Msa0278670:five_prime_UTR
ATCCCTTGCTTCCCTAATGA+GGG 0.592977 2_3:-11751520 None:intergenic
GCGATTGTGTCATTTGCACG+TGG 0.596481 2_3:+11751874 Msa0278670:three_prime_UTR
TGTTAAAGAAGGTTGTGGAG+AGG 0.599265 2_3:+11751577 Msa0278670:CDS
GGAACTTCATGTGAAGAGGG+TGG 0.603161 2_3:+11751598 Msa0278670:exon
CTACTCCAACTGATTGGAGA+AGG 0.606886 2_3:+11748644 Msa0278670:CDS
TTTGAAGCAACGTAGTTACA+GGG 0.611162 2_3:-11748532 None:intergenic
TTCAAACATGACAAAAGATG+AGG 0.614839 2_3:+11750500 Msa0278670:CDS
AGATAATGCTTCGAGTGATG+TGG 0.616055 2_3:+11748558 Msa0278670:CDS
CGTGGGAGTGAAATGTTACA+TGG 0.617115 2_3:+11751892 Msa0278670:three_prime_UTR
AGAGGGTGGGAAACATACTA+AGG 0.618327 2_3:+11751612 Msa0278670:three_prime_UTR
CCACACTTGATGCTGCCTGT+AGG 0.618877 2_3:+11750394 Msa0278670:CDS
TACTAAACTTAGTCTTGACC+AGG 0.618920 2_3:+11751939 Msa0278670:three_prime_UTR
AGAGGTAAAAGAGGCCAACA+AGG 0.621169 2_3:+11752172 Msa0278670:three_prime_UTR
CCTACAGGCAGCATCAAGTG+TGG 0.623280 2_3:-11750394 None:intergenic
TCTTCGAATTGAGGATCCTG+AGG 0.625034 2_3:+11751267 Msa0278670:CDS
CGATTGTGTCATTTGCACGT+GGG 0.626108 2_3:+11751875 Msa0278670:three_prime_UTR
GGTGAAGAATGGGTTGAATG+AGG 0.627714 2_3:-11748328 None:intergenic
AGAGGAACTTCATGTGAAGA+GGG 0.629889 2_3:+11751595 Msa0278670:exon
CTACAGGCAGCATCAAGTGT+GGG 0.630735 2_3:-11750393 None:intergenic
CTATGTGTGTAAATTTCAGT+TGG 0.631826 2_3:-11752254 None:intergenic
TCATTTATACAAGACTTCAG+TGG 0.634013 2_3:+11751195 Msa0278670:CDS
GAGAGGAACTTCATGTGAAG+AGG 0.635612 2_3:+11751594 Msa0278670:exon
AAAAGAACTGACAAAGCTTG+GGG 0.640924 2_3:+11750272 Msa0278670:intron
AAAAGAACTTGATTCGACAC+TGG 0.642159 2_3:+11750440 Msa0278670:CDS
CACCAGAGAAGCTTCACACG+TGG 0.643680 2_3:+11751454 Msa0278670:CDS
TGCTCTTGTGTAGATTGATG+AGG 0.644388 2_3:+11749630 Msa0278670:intron
TCTGATTATTGCAAGAACTG+GGG 0.644859 2_3:-11748201 None:intergenic
AGAACTTGAAGGAAACAATG+AGG 0.645727 2_3:+11751330 Msa0278670:CDS
GGATCCTGAGGAGCAACTGT+CGG 0.649811 2_3:+11751279 Msa0278670:CDS
AATTAGACTTGATGAAATCG+AGG 0.652822 2_3:-11752470 None:intergenic
AATATTTGTTCTATCAAACA+CGG 0.661110 2_3:+11752126 Msa0278670:three_prime_UTR
AGTAAAACAAAATTAACCTG+TGG 0.675068 2_3:+11752102 Msa0278670:three_prime_UTR
ATATAATAACATAAGAGACC+TGG 0.678828 2_3:-11751957 None:intergenic
GGGTGGGAAACATACTAAGG+TGG 0.685600 2_3:+11751615 Msa0278670:three_prime_UTR
GTAAATAGAATATATTCCAG+TGG 0.686075 2_3:+11751986 Msa0278670:three_prime_UTR
AGTTGATTGAGAAAATTAGG+CGG 0.699832 2_3:+11748159 Msa0278670:five_prime_UTR
TCTCGCGAGGAAGCTCAAAG+AGG 0.701476 2_3:+11748777 Msa0278670:CDS
GATGGAAGAGAAGAACGCAA+CGG 0.719575 2_3:-11748280 None:intergenic
TCACACGTGGATAAAGACTG+TGG 0.749282 2_3:+11751467 Msa0278670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCAAATATGAAAACA+TGG - chr2_3:11750213-11750232 None:intergenic 15.0%
!!! AAAACATTATAGGTTTTAAA+GGG - chr2_3:11750240-11750259 None:intergenic 15.0%
!!! AAAAACATTATAGGTTTTAA+AGG - chr2_3:11750241-11750260 None:intergenic 15.0%
!! CATAAAACAAAAAACATTAT+AGG - chr2_3:11750250-11750269 None:intergenic 15.0%
!! TTCTGATTTAAAAACTAAAT+AGG - chr2_3:11751145-11751164 None:intergenic 15.0%
!! AAGTCTAATAGTAAAAAAAA+GGG - chr2_3:11751840-11751859 None:intergenic 15.0%
!! AAAGTCTAATAGTAAAAAAA+AGG - chr2_3:11751841-11751860 None:intergenic 15.0%
!! ATAAAACTAAGTCAAATTAA+AGG - chr2_3:11752221-11752240 None:intergenic 15.0%
!!! AAAAGTTGATTGAGAAAATT+AGG + chr2_3:11748156-11748175 Msa0278670:five_prime_UTR 20.0%
!! ATGTTATTATCTGTCTATTT+AGG + chr2_3:11748493-11748512 Msa0278670:intron 20.0%
!! ATAACAGTTCTATATCATAA+AGG + chr2_3:11749086-11749105 Msa0278670:intron 20.0%
!! TAACAGTTCTATATCATAAA+GGG + chr2_3:11749087-11749106 Msa0278670:intron 20.0%
!! AGGCATTTATCAATAATTAA+AGG + chr2_3:11749368-11749387 Msa0278670:intron 20.0%
!! TTAATTGGAATATAAGAAAC+AGG + chr2_3:11749571-11749590 Msa0278670:intron 20.0%
!!! TCGTTTTTGAAATTTGAATT+TGG + chr2_3:11749828-11749847 Msa0278670:intron 20.0%
!! ATTCGAATATAACCATAATT+AGG + chr2_3:11750060-11750079 Msa0278670:intron 20.0%
!!! TTTTATATGTATGTATTCTG+AGG - chr2_3:11750137-11750156 None:intergenic 20.0%
!! AAAAGATGAGGTAAAATTTA+TGG + chr2_3:11750512-11750531 Msa0278670:intron 20.0%
!! GGATAAAAACATTATAGATA+AGG - chr2_3:11750765-11750784 None:intergenic 20.0%
!! ATAAGAGAGATTGAATATTT+GGG + chr2_3:11750812-11750831 Msa0278670:intron 20.0%
!! GTTAATTGAATAGTATAATG+AGG + chr2_3:11751010-11751029 Msa0278670:intron 20.0%
!! AAATCAGAACATTTATTTGT+AGG + chr2_3:11751156-11751175 Msa0278670:intron 20.0%
!! AACTTCTTAATATCTATTTC+AGG + chr2_3:11751430-11751449 Msa0278670:intron 20.0%
!! GTCTCTTATGTTATTATATA+TGG + chr2_3:11751961-11751980 Msa0278670:three_prime_UTR 20.0%
!! AATATTTGTTCTATCAAACA+CGG + chr2_3:11752126-11752145 Msa0278670:three_prime_UTR 20.0%
! TACACAATATTGACAAATAG+CGG + chr2_3:11749151-11749170 Msa0278670:intron 25.0%
!! CTTCATAATCACATTCATTT+TGG - chr2_3:11749531-11749550 None:intergenic 25.0%
! ACAATATTGCTAATTTCAGA+CGG - chr2_3:11749700-11749719 None:intergenic 25.0%
! AAAGATGCAGAAAAACAAAA+TGG + chr2_3:11749790-11749809 Msa0278670:CDS 25.0%
! CATTGGATTTATGAATTGTA+TGG + chr2_3:11749985-11750004 Msa0278670:intron 25.0%
!! TATTAAGAAGTGTGTTGAAT+TGG + chr2_3:11750182-11750201 Msa0278670:intron 25.0%
! TTAAATAGCAGTACATGTAA+AGG - chr2_3:11750553-11750572 None:intergenic 25.0%
!! GCTATTTAATTTCACGAATA+TGG + chr2_3:11750564-11750583 Msa0278670:intron 25.0%
!! ATTTAATTTCACGAATATGG+AGG + chr2_3:11750567-11750586 Msa0278670:intron 25.0%
! GATAAGAGAGATTGAATATT+TGG + chr2_3:11750811-11750830 Msa0278670:intron 25.0%
! TAAGAGAGATTGAATATTTG+GGG + chr2_3:11750813-11750832 Msa0278670:intron 25.0%
! TGTTGTCATTACAAAATATG+AGG + chr2_3:11750982-11751001 Msa0278670:intron 25.0%
! AATTGAATAGTATAATGAGG+TGG + chr2_3:11751013-11751032 Msa0278670:intron 25.0%
!! AAGTCTTGTATAAATGAAAG+AGG - chr2_3:11751192-11751211 None:intergenic 25.0%
! AAAATTGGAGATGTTAAAGA+AGG + chr2_3:11751566-11751585 Msa0278670:CDS 25.0%
!!! ACAATATTATGCTTTAGAGT+AGG - chr2_3:11751645-11751664 None:intergenic 25.0%
! GTGTTTATATTTAGACACTT+CGG + chr2_3:11751729-11751748 Msa0278670:three_prime_UTR 25.0%
!!! TTAGACTTTGAAATTTGAGT+AGG + chr2_3:11751852-11751871 Msa0278670:three_prime_UTR 25.0%
! ATATAATAACATAAGAGACC+TGG - chr2_3:11751960-11751979 None:intergenic 25.0%
! GTAAATAGAATATATTCCAG+TGG + chr2_3:11751986-11752005 Msa0278670:three_prime_UTR 25.0%
! GCACAATTGAAAAATTACAA+TGG + chr2_3:11752037-11752056 Msa0278670:three_prime_UTR 25.0%
! AGTAAAACAAAATTAACCTG+TGG + chr2_3:11752102-11752121 Msa0278670:three_prime_UTR 25.0%
!! AGTCAAATTAAAGGTATGTT+TGG - chr2_3:11752212-11752231 None:intergenic 25.0%
! AAACTAATCGACGAATTTAT+CGG - chr2_3:11752448-11752467 None:intergenic 25.0%
AGTTGATTGAGAAAATTAGG+CGG + chr2_3:11748159-11748178 Msa0278670:five_prime_UTR 30.0%
!!! CATTTTGATTGGTGAAGAAT+GGG - chr2_3:11748341-11748360 None:intergenic 30.0%
!!! TCATTTTGATTGGTGAAGAA+TGG - chr2_3:11748342-11748361 None:intergenic 30.0%
! AAACGGTTACTTACTTGTTA+GGG - chr2_3:11748410-11748429 None:intergenic 30.0%
TAAACGGTTACTTACTTGTT+AGG - chr2_3:11748411-11748430 None:intergenic 30.0%
TAACAAGTAAGTAACCGTTT+AGG + chr2_3:11748410-11748429 Msa0278670:intron 30.0%
AACAAGTAAGTAACCGTTTA+GGG + chr2_3:11748411-11748430 Msa0278670:intron 30.0%
ACATGATGATAAACCCTAAA+CGG - chr2_3:11748427-11748446 None:intergenic 30.0%
GTAGATGAAAGCAAAATGAT+TGG + chr2_3:11748580-11748599 Msa0278670:CDS 30.0%
!! TAAACTCATTGGTGTTTTCA+TGG + chr2_3:11748612-11748631 Msa0278670:CDS 30.0%
!!! TTAGACCTCATTTTTTTGCA+CGG + chr2_3:11748698-11748717 Msa0278670:CDS 30.0%
TAAACAACTAATTGACAGTC+TGG - chr2_3:11748828-11748847 None:intergenic 30.0%
TTGTGAAGGTTTGTCAATTA+CGG + chr2_3:11748851-11748870 Msa0278670:intron 30.0%
!!! CGTTTAGATCACCTTATTTT+CGG - chr2_3:11748935-11748954 None:intergenic 30.0%
ATCTAAACGTAACTTCTGAT+AGG + chr2_3:11748946-11748965 Msa0278670:intron 30.0%
TTGCCAGAATAGCAATTATT+TGG + chr2_3:11749251-11749270 Msa0278670:intron 30.0%
! TTGCCAAATAATTGCTATTC+TGG - chr2_3:11749257-11749276 None:intergenic 30.0%
ACCATATTGCGAAACAATAT+AGG + chr2_3:11749292-11749311 Msa0278670:intron 30.0%
CCATATTGCGAAACAATATA+GGG + chr2_3:11749293-11749312 Msa0278670:intron 30.0%
! TATGAAGAAGTTGCTTTATG+TGG + chr2_3:11749544-11749563 Msa0278670:intron 30.0%
GCTTTATGTGGTATGTTAAT+TGG + chr2_3:11749556-11749575 Msa0278670:intron 30.0%
! TTTTTCTGCATCTTTGTAGT+AGG - chr2_3:11749785-11749804 None:intergenic 30.0%
!!! GCATTAACTGTTTTTTTGTG+TGG + chr2_3:11749872-11749891 Msa0278670:intron 30.0%
! ACTTTTGAACTGGATGAATA+TGG - chr2_3:11749909-11749928 None:intergenic 30.0%
! AACGTAACAAACTTTTGAAC+TGG - chr2_3:11749919-11749938 None:intergenic 30.0%
CATTGTCTAGTTAAAATCCA+AGG - chr2_3:11749946-11749965 None:intergenic 30.0%
!!! CTTGGATTTTAACTAGACAA+TGG + chr2_3:11749944-11749963 Msa0278670:intron 30.0%
TTGTAGAAGCAAAATACTTC+TGG + chr2_3:11750025-11750044 Msa0278670:intron 30.0%
! ACCATAATTAGGAGAACTTT+TGG + chr2_3:11750071-11750090 Msa0278670:intron 30.0%
TCCAAAAGTTCTCCTAATTA+TGG - chr2_3:11750075-11750094 None:intergenic 30.0%
TGGGAGAATTCATAATATCT+TGG - chr2_3:11750377-11750396 None:intergenic 30.0%
! TTTTGTCATGTTTGAATCCT+TGG - chr2_3:11750496-11750515 None:intergenic 30.0%
TTCAAACATGACAAAAGATG+AGG + chr2_3:11750500-11750519 Msa0278670:CDS 30.0%
AAGAGAGATTGAATATTTGG+GGG + chr2_3:11750814-11750833 Msa0278670:intron 30.0%
CTGCTTAGCTAGATATTATA+TGG + chr2_3:11751085-11751104 Msa0278670:intron 30.0%
AAAACTAAATAGGCAATAGC+TGG - chr2_3:11751135-11751154 None:intergenic 30.0%
TCATTTATACAAGACTTCAG+TGG + chr2_3:11751195-11751214 Msa0278670:CDS 30.0%
! TTGACTATTCGAATCTCTTT+TGG - chr2_3:11751241-11751260 None:intergenic 30.0%
CAAGTATATTCTTCGAATTG+AGG + chr2_3:11751258-11751277 Msa0278670:CDS 30.0%
AGGTGTAAATGCATCTTTAA+GGG - chr2_3:11751305-11751324 None:intergenic 30.0%
CGATTGTAACATCAAAAGTT+AGG + chr2_3:11751806-11751825 Msa0278670:three_prime_UTR 30.0%
GATAGAACAAATATTACCAC+AGG - chr2_3:11752121-11752140 None:intergenic 30.0%
! TAAAGGTATGTTTGGTTAGA+GGG - chr2_3:11752204-11752223 None:intergenic 30.0%
! TTAAAGGTATGTTTGGTTAG+AGG - chr2_3:11752205-11752224 None:intergenic 30.0%
! TTTCAGTTGGTGCAAAAAAA+GGG - chr2_3:11752244-11752263 None:intergenic 30.0%
! ATTTCAGTTGGTGCAAAAAA+AGG - chr2_3:11752245-11752264 None:intergenic 30.0%
CTATGTGTGTAAATTTCAGT+TGG - chr2_3:11752257-11752276 None:intergenic 30.0%
! TTTTATACAAGTTCGAACCT+AGG - chr2_3:11752289-11752308 None:intergenic 30.0%
AGGTTCGAACTTGTATAAAA+AGG + chr2_3:11752289-11752308 Msa0278670:three_prime_UTR 30.0%
GGTTCGAACTTGTATAAAAA+GGG + chr2_3:11752290-11752309 Msa0278670:three_prime_UTR 30.0%
TCTGATTATTGCAAGAACTG+GGG - chr2_3:11748204-11748223 None:intergenic 35.0%
CTCTGATTATTGCAAGAACT+GGG - chr2_3:11748205-11748224 None:intergenic 35.0%
TCTCTGATTATTGCAAGAAC+TGG - chr2_3:11748206-11748225 None:intergenic 35.0%
GATGAAGAAGAAGAGATGAA+AGG - chr2_3:11748307-11748326 None:intergenic 35.0%
!! GGAAGTGAAGTCATTTTGAT+TGG - chr2_3:11748352-11748371 None:intergenic 35.0%
! ACTTGTTAGGGTTTGAAGTT+TGG - chr2_3:11748398-11748417 None:intergenic 35.0%
! TTTGAAGCAACGTAGTTACA+GGG - chr2_3:11748535-11748554 None:intergenic 35.0%
GGAGTTTGTGATAAACTCAT+TGG + chr2_3:11748601-11748620 Msa0278670:CDS 35.0%
ATAAACCTACTCCAACTGAT+TGG + chr2_3:11748638-11748657 Msa0278670:CDS 35.0%
!!! TGTTAGCTTTTAGCAGAGAA+TGG + chr2_3:11748668-11748687 Msa0278670:CDS 35.0%
TTACACCGTGCAAAAAAATG+AGG - chr2_3:11748706-11748725 None:intergenic 35.0%
! AGTAGCTTTTCCTTCAAAAC+AGG - chr2_3:11748754-11748773 None:intergenic 35.0%
TTAGTTGTTTAGCGTTGTGA+AGG + chr2_3:11748837-11748856 Msa0278670:intron 35.0%
CAATTACGGATAATAGCAGT+TGG + chr2_3:11748865-11748884 Msa0278670:intron 35.0%
ACACAAACTGCTCAACAAAA+AGG + chr2_3:11748909-11748928 Msa0278670:intron 35.0%
CAACAAAAAGGCCGAAAATA+AGG + chr2_3:11748921-11748940 Msa0278670:intron 35.0%
CCCTATATTGTTTCGCAATA+TGG - chr2_3:11749296-11749315 None:intergenic 35.0%
!! CAAAGGTGCTATATAGAGTA+TGG - chr2_3:11749332-11749351 None:intergenic 35.0%
TATACATAGCAGAGCTACAA+AGG - chr2_3:11749349-11749368 None:intergenic 35.0%
! TTTGTAGCTCTGCTATGTAT+AGG + chr2_3:11749348-11749367 Msa0278670:intron 35.0%
! TAGTTGTCGTTTCAAACACT+TGG + chr2_3:11749444-11749463 Msa0278670:intron 35.0%
! AGTTGTCGTTTCAAACACTT+GGG + chr2_3:11749445-11749464 Msa0278670:intron 35.0%
TCAGAGACATAATGATCTTC+TGG + chr2_3:11749657-11749676 Msa0278670:CDS 35.0%
TCTTCTGGATGTAATCAGAA+AGG + chr2_3:11749672-11749691 Msa0278670:CDS 35.0%
!! AGTTTGTTACGTTTCTTCCT+TGG + chr2_3:11749926-11749945 Msa0278670:intron 35.0%
! TAGACAATGGTGCTTTTCAA+TGG + chr2_3:11749957-11749976 Msa0278670:intron 35.0%
! GCTTTTCAATGGTTGAACAT+TGG + chr2_3:11749968-11749987 Msa0278670:intron 35.0%
ATTGTCTTTGTTAAGCTGTG+TGG + chr2_3:11750096-11750115 Msa0278670:intron 35.0%
TGACATCTAGCAGATGATAT+TGG - chr2_3:11750160-11750179 None:intergenic 35.0%
TGAAAAGAACTGACAAAGCT+TGG + chr2_3:11750270-11750289 Msa0278670:intron 35.0%
GAAAAGAACTGACAAAGCTT+GGG + chr2_3:11750271-11750290 Msa0278670:intron 35.0%
AAAAGAACTGACAAAGCTTG+GGG + chr2_3:11750272-11750291 Msa0278670:intron 35.0%
CAAATTGTCTATCTTCCTAC+AGG - chr2_3:11750412-11750431 None:intergenic 35.0%
CTGTAGGAAGATAGACAATT+TGG + chr2_3:11750410-11750429 Msa0278670:CDS 35.0%
! AAAAGAACTTGATTCGACAC+TGG + chr2_3:11750440-11750459 Msa0278670:CDS 35.0%
! TATTGATGATCACCAAAGCT+TGG + chr2_3:11750463-11750482 Msa0278670:CDS 35.0%
! ATTGATGATCACCAAAGCTT+GGG + chr2_3:11750464-11750483 Msa0278670:CDS 35.0%
GTAAAATTTATGGTCACCTC+AGG + chr2_3:11750522-11750541 Msa0278670:intron 35.0%
ATTTCACGAATATGGAGGAT+AGG + chr2_3:11750572-11750591 Msa0278670:intron 35.0%
TTTCACGAATATGGAGGATA+GGG + chr2_3:11750573-11750592 Msa0278670:intron 35.0%
CACCATTGCAGCATAATTTA+TGG + chr2_3:11750717-11750736 Msa0278670:intron 35.0%
TGCCATAAATTATGCTGCAA+TGG - chr2_3:11750722-11750741 None:intergenic 35.0%
TACGCTTACTCAAAAACTCA+AGG + chr2_3:11750865-11750884 Msa0278670:intron 35.0%
ACGCTTACTCAAAAACTCAA+GGG + chr2_3:11750866-11750885 Msa0278670:intron 35.0%
! GTAGGTTTGTTTAATGGACA+AGG - chr2_3:11751048-11751067 None:intergenic 35.0%
! GAATGCGTAGGTTTGTTTAA+TGG - chr2_3:11751054-11751073 None:intergenic 35.0%
TTAAACAAACCTACGCATTC+AGG + chr2_3:11751054-11751073 Msa0278670:intron 35.0%
CAGGTGTAAATGCATCTTTA+AGG - chr2_3:11751306-11751325 None:intergenic 35.0%
CTTAAAGATGCATTTACACC+TGG + chr2_3:11751304-11751323 Msa0278670:CDS 35.0%
AGAACTTGAAGGAAACAATG+AGG + chr2_3:11751330-11751349 Msa0278670:CDS 35.0%
CTCGAAATTGAATTCAGTTG+TGG + chr2_3:11751406-11751425 Msa0278670:intron 35.0%
GCTTATCATTTGAGCAAAGA+AGG + chr2_3:11751495-11751514 Msa0278670:CDS 35.0%
!! TACTAAACTTAGTCTTGACC+AGG + chr2_3:11751939-11751958 Msa0278670:three_prime_UTR 35.0%
! AAAGGTATGTTTGGTTAGAG+GGG - chr2_3:11752203-11752222 None:intergenic 35.0%
TTGAATTGCCCATTTCAACT+AGG + chr2_3:11752420-11752439 Msa0278670:intron 35.0%
!! TATCGGTTCCTAGTTGAAAT+GGG - chr2_3:11752431-11752450 None:intergenic 35.0%
!! TTATCGGTTCCTAGTTGAAA+TGG - chr2_3:11752432-11752451 None:intergenic 35.0%
TGATTGAGAAAATTAGGCGG+AGG + chr2_3:11748162-11748181 Msa0278670:five_prime_UTR 40.0%
CAGAATCGAAACTCACTTGA+TGG + chr2_3:11748237-11748256 Msa0278670:exon 40.0%
GAAGAAGAGATGAAAGGTGA+TGG - chr2_3:11748301-11748320 None:intergenic 40.0%
AAAGAGACGAAGCGAGAAAA+GGG - chr2_3:11748373-11748392 None:intergenic 40.0%
! GTTTGAAGCAACGTAGTTAC+AGG - chr2_3:11748536-11748555 None:intergenic 40.0%
AGATAATGCTTCGAGTGATG+TGG + chr2_3:11748558-11748577 Msa0278670:CDS 40.0%
AACAACCTTCTCCAATCAGT+TGG - chr2_3:11748652-11748671 None:intergenic 40.0%
!! TGAGACTGATCCTGTTTTGA+AGG + chr2_3:11748741-11748760 Msa0278670:CDS 40.0%
AGCAGTTGGAAATTGCTCTA+TGG + chr2_3:11748879-11748898 Msa0278670:intron 40.0%
GCAGTTGGAAATTGCTCTAT+GGG + chr2_3:11748880-11748899 Msa0278670:intron 40.0%
TTGTTGAGCAGTTTGTGTGT+GGG - chr2_3:11748907-11748926 None:intergenic 40.0%
TTTGTTGAGCAGTTTGTGTG+TGG - chr2_3:11748908-11748927 None:intergenic 40.0%
CGTAACTTCTGATAGGTTTG+TGG + chr2_3:11748953-11748972 Msa0278670:intron 40.0%
GCAATTTCCATAGCAGTTTG+TGG + chr2_3:11749037-11749056 Msa0278670:intron 40.0%
! TATTTTTCGCGATCCACGAT+TGG + chr2_3:11749223-11749242 Msa0278670:intron 40.0%
TGCTCTTGTGTAGATTGATG+AGG + chr2_3:11749630-11749649 Msa0278670:intron 40.0%
TGTAAAATCCTTCCTACGCT+TGG - chr2_3:11749725-11749744 None:intergenic 40.0%
ACATGTAAAGGAAAGTCCTG+AGG - chr2_3:11750541-11750560 None:intergenic 40.0%
TACACTGCAATGCAACAAAG+TGG + chr2_3:11750626-11750645 Msa0278670:intron 40.0%
GCAATGCAACAAAGTGGATA+AGG + chr2_3:11750632-11750651 Msa0278670:intron 40.0%
ATTATGCTGCAATGGTGTGT+TGG - chr2_3:11750714-11750733 None:intergenic 40.0%
TTCAAAAACTAAGCATGGGC+AGG - chr2_3:11750786-11750805 None:intergenic 40.0%
!! TGCCCATGCTTAGTTTTTGA+AGG + chr2_3:11750785-11750804 Msa0278670:intron 40.0%
!! GCCCATGCTTAGTTTTTGAA+GGG + chr2_3:11750786-11750805 Msa0278670:intron 40.0%
CCCCTTCAAAAACTAAGCAT+GGG - chr2_3:11750790-11750809 None:intergenic 40.0%
!! CCCATGCTTAGTTTTTGAAG+GGG + chr2_3:11750787-11750806 Msa0278670:intron 40.0%
TCCCCTTCAAAAACTAAGCA+TGG - chr2_3:11750791-11750810 None:intergenic 40.0%
GGGAAAATAACAAGCAAACG+AGG + chr2_3:11750834-11750853 Msa0278670:intron 40.0%
! TTTCCTTCAAGTTCTTCTCC+AGG - chr2_3:11751325-11751344 None:intergenic 40.0%
!! CAAAGAAGGTACCCTCATTA+GGG + chr2_3:11751509-11751528 Msa0278670:CDS 40.0%
TCCAGAGATCGTCGAAAAAT+TGG + chr2_3:11751551-11751570 Msa0278670:CDS 40.0%
!! TCCAATTTTTCGACGATCTC+TGG - chr2_3:11751555-11751574 None:intergenic 40.0%
GGAGATGTTAAAGAAGGTTG+TGG + chr2_3:11751572-11751591 Msa0278670:CDS 40.0%
TGTTAAAGAAGGTTGTGGAG+AGG + chr2_3:11751577-11751596 Msa0278670:CDS 40.0%
AGAGGAACTTCATGTGAAGA+GGG + chr2_3:11751595-11751614 Msa0278670:exon 40.0%
GAGCAATGCTGTTGTAAATC+CGG - chr2_3:11751702-11751721 None:intergenic 40.0%
ACAACAGAGTAAGCTGAATC+AGG + chr2_3:11751761-11751780 Msa0278670:three_prime_UTR 40.0%
AATTGCAGAACAACCTGAAG+AGG + chr2_3:11752154-11752173 Msa0278670:three_prime_UTR 40.0%
ACAACCTGAAGAGGTAAAAG+AGG + chr2_3:11752163-11752182 Msa0278670:three_prime_UTR 40.0%
GATGGAAGAGAAGAACGCAA+CGG - chr2_3:11748283-11748302 None:intergenic 45.0%
!! GGTGAAGAATGGGTTGAATG+AGG - chr2_3:11748331-11748350 None:intergenic 45.0%
GAAAGAGACGAAGCGAGAAA+AGG - chr2_3:11748374-11748393 None:intergenic 45.0%
CTTCTCCAATCAGTTGGAGT+AGG - chr2_3:11748646-11748665 None:intergenic 45.0%
CTACTCCAACTGATTGGAGA+AGG + chr2_3:11748644-11748663 Msa0278670:CDS 45.0%
TGTTGAGCAGTTTGTGTGTG+GGG - chr2_3:11748906-11748925 None:intergenic 45.0%
TTCTGATAGGTTTGTGGCGT+TGG + chr2_3:11748959-11748978 Msa0278670:intron 45.0%
TCTGATAGGTTTGTGGCGTT+GGG + chr2_3:11748960-11748979 Msa0278670:intron 45.0%
AGGTGTGGTCTGATAAATCG+AGG + chr2_3:11748983-11749002 Msa0278670:intron 45.0%
GGTGTGGTCTGATAAATCGA+GGG + chr2_3:11748984-11749003 Msa0278670:intron 45.0%
GTGTGGTCTGATAAATCGAG+GGG + chr2_3:11748985-11749004 Msa0278670:intron 45.0%
CGCTATACCACAAACTGCTA+TGG - chr2_3:11749047-11749066 None:intergenic 45.0%
CTCTCGTAGACAAGCATTTG+TGG + chr2_3:11749495-11749514 Msa0278670:intron 45.0%
TCGTAGACAAGCATTTGTGG+TGG + chr2_3:11749498-11749517 Msa0278670:intron 45.0%
GCAATATTGTCTCCAAGCGT+AGG + chr2_3:11749710-11749729 Msa0278670:CDS 45.0%
TATTGTCTCCAAGCGTAGGA+AGG + chr2_3:11749714-11749733 Msa0278670:CDS 45.0%
GCTTTCTGTAGCACCATCAT+AGG - chr2_3:11750322-11750341 None:intergenic 45.0%
! CTAATGTAGCTTGCGAGTAG+TGG - chr2_3:11750911-11750930 None:intergenic 45.0%
GAATACGATCCTGAATGCGT+AGG - chr2_3:11751066-11751085 None:intergenic 45.0%
TCTTCGAATTGAGGATCCTG+AGG + chr2_3:11751267-11751286 Msa0278670:CDS 45.0%
ACACCTGGAGAAGAACTTGA+AGG + chr2_3:11751319-11751338 Msa0278670:CDS 45.0%
TCACACGTGGATAAAGACTG+TGG + chr2_3:11751467-11751486 Msa0278670:CDS 45.0%
!! GCAAAGAAGGTACCCTCATT+AGG + chr2_3:11751508-11751527 Msa0278670:CDS 45.0%
TACCCTCATTAGGGAAGCAA+GGG + chr2_3:11751518-11751537 Msa0278670:CDS 45.0%
ATCCCTTGCTTCCCTAATGA+GGG - chr2_3:11751523-11751542 None:intergenic 45.0%
GAGAGGAACTTCATGTGAAG+AGG + chr2_3:11751594-11751613 Msa0278670:exon 45.0%
GAACTTCATGTGAAGAGGGT+GGG + chr2_3:11751599-11751618 Msa0278670:exon 45.0%
AGAGGGTGGGAAACATACTA+AGG + chr2_3:11751612-11751631 Msa0278670:three_prime_UTR 45.0%
ATGTCCATCAAGTGCAGATC+CGG + chr2_3:11751680-11751699 Msa0278670:three_prime_UTR 45.0%
AAATCCGGATCTGCACTTGA+TGG - chr2_3:11751687-11751706 None:intergenic 45.0%
!! CGATTGTGTCATTTGCACGT+GGG + chr2_3:11751875-11751894 Msa0278670:three_prime_UTR 45.0%
CGTGGGAGTGAAATGTTACA+TGG + chr2_3:11751892-11751911 Msa0278670:three_prime_UTR 45.0%
TTCCTCAGCCTTCAAAGACA+TGG - chr2_3:11752012-11752031 None:intergenic 45.0%
! TTGGCCTCTTTTACCTCTTC+AGG - chr2_3:11752170-11752189 None:intergenic 45.0%
AGAGGTAAAAGAGGCCAACA+AGG + chr2_3:11752172-11752191 Msa0278670:three_prime_UTR 45.0%
ACACATAGCTGTCAGATCCT+AGG + chr2_3:11752269-11752288 Msa0278670:three_prime_UTR 45.0%
GGGCATTTGAGCAAACACGA+GGG + chr2_3:11749005-11749024 Msa0278670:intron 50.0%
TCTGGCAATGTTGCCAATCG+TGG - chr2_3:11749239-11749258 None:intergenic 50.0%
GCTGCTGTACAAGCCTATGA+TGG + chr2_3:11750306-11750325 Msa0278670:CDS 50.0%
CTACAGGCAGCATCAAGTGT+GGG - chr2_3:11750396-11750415 None:intergenic 50.0%
ATCCACGTGTGAAGCTTCTC+TGG - chr2_3:11751459-11751478 None:intergenic 50.0%
GTACCCTCATTAGGGAAGCA+AGG + chr2_3:11751517-11751536 Msa0278670:CDS 50.0%
GATCCCTTGCTTCCCTAATG+AGG - chr2_3:11751524-11751543 None:intergenic 50.0%
GGAACTTCATGTGAAGAGGG+TGG + chr2_3:11751598-11751617 Msa0278670:exon 50.0%
GGGTGGGAAACATACTAAGG+TGG + chr2_3:11751615-11751634 Msa0278670:three_prime_UTR 50.0%
!! GCGATTGTGTCATTTGCACG+TGG + chr2_3:11751874-11751893 Msa0278670:three_prime_UTR 50.0%
TCCAGTGGCCATGTCTTTGA+AGG + chr2_3:11752001-11752020 Msa0278670:three_prime_UTR 50.0%
GGTATGTTTGGTTAGAGGGG+TGG - chr2_3:11752200-11752219 None:intergenic 50.0%
AAAAGCTACTCCGTCTCGCG+AGG + chr2_3:11748764-11748783 Msa0278670:CDS 55.0%
CTTTGAGCTTCCTCGCGAGA+CGG - chr2_3:11748777-11748796 None:intergenic 55.0%
TCTCGCGAGGAAGCTCAAAG+AGG + chr2_3:11748777-11748796 Msa0278670:CDS 55.0%
! GATAGGTTTGTGGCGTTGGG+AGG + chr2_3:11748963-11748982 Msa0278670:intron 55.0%
! GGGGCATTTGAGCAAACACG+AGG + chr2_3:11749004-11749023 Msa0278670:intron 55.0%
CCTACAGGCAGCATCAAGTG+TGG - chr2_3:11750397-11750416 None:intergenic 55.0%
CCACACTTGATGCTGCCTGT+AGG + chr2_3:11750394-11750413 Msa0278670:CDS 55.0%
GGATCCTGAGGAGCAACTGT+CGG + chr2_3:11751279-11751298 Msa0278670:CDS 55.0%
CACCAGAGAAGCTTCACACG+TGG + chr2_3:11751454-11751473 Msa0278670:CDS 55.0%
GCCTTCAAAGACATGGCCAC+TGG - chr2_3:11752005-11752024 None:intergenic 55.0%
! GGCCATGTCTTTGAAGGCTG+AGG + chr2_3:11752007-11752026 Msa0278670:three_prime_UTR 55.0%
! TTAGAGGGGTGGAGCCTTGT+TGG - chr2_3:11752189-11752208 None:intergenic 55.0%
! GTTTGTGGCGTTGGGAGGTG+TGG + chr2_3:11748968-11748987 Msa0278670:intron 60.0%
CTTGGCAGCAGCCCAAGCTT+TGG - chr2_3:11750478-11750497 None:intergenic 60.0%
CAAAGCTTGGGCTGCTGCCA+AGG + chr2_3:11750476-11750495 Msa0278670:CDS 60.0%
AGGGCCGACAGTTGCTCCTC+AGG - chr2_3:11751286-11751305 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 11748155 11752481 11748155 ID=Msa0278670;Name=Msa0278670
chr2_3 mRNA 11748155 11752481 11748155 ID=Msa0278670-mRNA-1;Parent=Msa0278670;Name=Msa0278670-mRNA-1;_AED=0.06;_eAED=0.06;_QI=101|1|1|1|0.83|0.71|7|804|401
chr2_3 exon 11748155 11748415 11748155 ID=Msa0278670-mRNA-1:exon:5269;Parent=Msa0278670-mRNA-1
chr2_3 exon 11748515 11748798 11748515 ID=Msa0278670-mRNA-1:exon:5270;Parent=Msa0278670-mRNA-1
chr2_3 exon 11749643 11749811 11749643 ID=Msa0278670-mRNA-1:exon:5271;Parent=Msa0278670-mRNA-1
chr2_3 exon 11750277 11750521 11750277 ID=Msa0278670-mRNA-1:exon:5272;Parent=Msa0278670-mRNA-1
chr2_3 exon 11751178 11751365 11751178 ID=Msa0278670-mRNA-1:exon:5273;Parent=Msa0278670-mRNA-1
chr2_3 exon 11751452 11752379 11751452 ID=Msa0278670-mRNA-1:exon:5274;Parent=Msa0278670-mRNA-1
chr2_3 exon 11752446 11752481 11752446 ID=Msa0278670-mRNA-1:exon:5275;Parent=Msa0278670-mRNA-1
chr2_3 five_prime_UTR 11748155 11748255 11748155 ID=Msa0278670-mRNA-1:five_prime_utr;Parent=Msa0278670-mRNA-1
chr2_3 CDS 11748256 11748415 11748256 ID=Msa0278670-mRNA-1:cds;Parent=Msa0278670-mRNA-1
chr2_3 CDS 11748515 11748798 11748515 ID=Msa0278670-mRNA-1:cds;Parent=Msa0278670-mRNA-1
chr2_3 CDS 11749643 11749811 11749643 ID=Msa0278670-mRNA-1:cds;Parent=Msa0278670-mRNA-1
chr2_3 CDS 11750277 11750521 11750277 ID=Msa0278670-mRNA-1:cds;Parent=Msa0278670-mRNA-1
chr2_3 CDS 11751178 11751365 11751178 ID=Msa0278670-mRNA-1:cds;Parent=Msa0278670-mRNA-1
chr2_3 CDS 11751452 11751611 11751452 ID=Msa0278670-mRNA-1:cds;Parent=Msa0278670-mRNA-1
chr2_3 three_prime_UTR 11751612 11752379 11751612 ID=Msa0278670-mRNA-1:three_prime_utr;Parent=Msa0278670-mRNA-1
chr2_3 three_prime_UTR 11752446 11752481 11752446 ID=Msa0278670-mRNA-1:three_prime_utr;Parent=Msa0278670-mRNA-1
Gene Sequence

>Msa0278670

ATGGAGTTACACACTTCAATTCTACCGTTGCGTTCTTCTCTTCCATCACCTTTCATCTCTTCTTCTTCATCACCTCATTCAACCCATTCTTCACCAATCAAAATGACTTCACTTCCCTTTTCTCGCTTCGTCTCTTTCACCAAACTTCAAACCCTAACAAGACGAAGAAGTTTACAACCCTGTAACTACGTTGCTTCAAACGAAGATAATGCTTCGAGTGATGTGGTAGATGAAAGCAAAATGATTGGAGTTTGTGATAAACTCATTGGTGTTTTCATGGTTGATAAACCTACTCCAACTGATTGGAGAAGGTTGTTAGCTTTTAGCAGAGAATGGAATAACATTAGACCTCATTTTTTTGCACGGTGTAACGATAAAGCAGTTTCTGAGACTGATCCTGTTTTGAAGGAAAAGCTACTCCGTCTCGCGAGGAAGCTCAAAGAGATTGATGAGGATGTTCAGAGACATAATGATCTTCTGGATGTAATCAGAAAGGATCCGTCTGAAATTAGCAATATTGTCTCCAAGCGTAGGAAGGATTTTACAAATGAATTCTTTGAGCATCTTCACACAGTGACTCAGTCCTACTACAAAGATGCAGAAAAACAAAATGAACTGACAAAGCTTGGGGAAGCATGCTTTGCTGCTGTACAAGCCTATGATGGTGCTACAGAAAGCATTGAGCAGATAAATGCTGCACAGCTGAAGTTCCAAGATATTATGAATTCTCCCACACTTGATGCTGCCTGTAGGAAGATAGACAATTTGGCTGAAAAAAAAGAACTTGATTCGACACTGGTATTGATGATCACCAAAGCTTGGGCTGCTGCCAAGGATTCAAACATGACAAAAGATGAGGTAAAAGACATCCTCTTTCATTTATACAAGACTTCAGTGGCAAATCTTCAGAGACTCGTTCCAAAAGAGATTCGAATAGTCAAGTATATTCTTCGAATTGAGGATCCTGAGGAGCAACTGTCGGCCCTTAAAGATGCATTTACACCTGGAGAAGAACTTGAAGGAAACAATGAGGATAGTTTGTACACGACACCAGAGAAGCTTCACACGTGGATAAAGACTGTGGTCGATGCTTATCATTTGAGCAAAGAAGGTACCCTCATTAGGGAAGCAAGGGATCTGTTGAATCCAGAGATCGTCGAAAAATTGGAGATGTTAAAGAAGGTTGTGGAGAGGAACTTCATGTGA

Protein sequence

>Msa0278670

MELHTSILPLRSSLPSPFISSSSSPHSTHSSPIKMTSLPFSRFVSFTKLQTLTRRRSLQPCNYVASNEDNASSDVVDESKMIGVCDKLIGVFMVDKPTPTDWRRLLAFSREWNNIRPHFFARCNDKAVSETDPVLKEKLLRLARKLKEIDEDVQRHNDLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHTVTQSYYKDAEKQNELTKLGEACFAAVQAYDGATESIEQINAAQLKFQDIMNSPTLDAACRKIDNLAEKKELDSTLVLMITKAWAAAKDSNMTKDEVKDILFHLYKTSVANLQRLVPKEIRIVKYILRIEDPEEQLSALKDAFTPGEELEGNNEDSLYTTPEKLHTWIKTVVDAYHLSKEGTLIREARDLLNPEIVEKLEMLKKVVERNFM*