AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0724450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0724450 MtrunA17_Chr5g0415641 97.521 242 6 0 1 242 1 242 5.85e-180 493
Msa0724450 MtrunA17_Chr5g0415571 80.000 200 39 1 1 199 1 200 5.45e-118 335
Msa0724450 MtrunA17_Chr5g0415631 69.355 248 69 2 1 242 1 247 5.33e-117 335
Msa0724450 MtrunA17_Chr5g0415611 64.516 248 81 2 1 242 1 247 1.25e-116 334
Msa0724450 MtrunA17_Chr8g0363491 65.532 235 81 0 8 242 10 244 7.47e-109 314
Msa0724450 MtrunA17_Chr8g0362921 65.106 235 82 0 8 242 11 245 6.82e-108 311
Msa0724450 MtrunA17_Chr8g0362831 65.106 235 82 0 8 242 10 244 7.04e-108 311
Msa0724450 MtrunA17_Chr5g0415581 56.855 248 66 3 1 242 1 213 3.90e-94 276
Msa0724450 MtrunA17_Chr8g0362611 53.913 230 104 1 4 233 9 236 6.77e-88 262
Msa0724450 MtrunA17_Chr8g0362601 54.783 230 102 1 4 233 9 236 6.53e-87 261
Msa0724450 MtrunA17_Chr3g0102251 55.172 174 77 1 10 182 15 188 9.82e-66 205
Msa0724450 MtrunA17_Chr3g0102221 58.065 155 64 1 8 161 13 167 4.42e-64 197
Msa0724450 MtrunA17_Chr3g0102131 51.531 196 91 2 8 199 13 208 9.90e-63 211
Msa0724450 MtrunA17_Chr8g0342791 54.545 176 80 0 12 187 6 181 1.44e-62 211
Msa0724450 MtrunA17_Chr3g0102261 52.577 194 88 2 10 199 15 208 1.59e-62 211
Msa0724450 MtrunA17_Chr4g0018431 53.731 201 82 4 8 199 15 213 2.50e-62 210
Msa0724450 MtrunA17_Chr2g0298291 53.398 206 84 5 1 199 7 207 3.10e-62 210
Msa0724450 MtrunA17_Chr3g0102281 56.250 176 76 1 8 182 13 188 3.23e-62 210
Msa0724450 MtrunA17_Chr3g0102121 56.322 174 75 1 10 182 15 188 4.19e-61 207
Msa0724450 MtrunA17_Chr3g0118981 53.299 197 85 4 8 199 18 212 4.35e-61 207
Msa0724450 MtrunA17_Chr3g0102271 55.682 176 77 1 8 182 13 188 1.62e-60 205
Msa0724450 MtrunA17_Chr8g0382341 51.596 188 87 2 13 200 39 222 3.76e-60 192
Msa0724450 MtrunA17_Chr2g0298531 50.485 206 95 3 1 199 7 212 6.51e-60 203
Msa0724450 MtrunA17_Chr3g0119591 55.491 173 75 2 7 178 5 176 8.87e-60 193
Msa0724450 MtrunA17_Chr3g0102171 52.273 176 83 1 8 182 13 188 1.07e-58 200
Msa0724450 MtrunA17_Chr3g0119001 52.284 197 87 4 8 199 18 212 2.19e-58 199
Msa0724450 MtrunA17_Chr5g0439951 50.802 187 87 1 6 187 9 195 7.50e-58 197
Msa0724450 MtrunA17_Chr8g0343681 45.050 202 102 3 8 202 40 239 2.93e-57 189
Msa0724450 MtrunA17_Chr1g0172831 52.381 168 79 1 12 178 16 183 3.91e-57 193
Msa0724450 MtrunA17_Chr3g0119601 56.647 173 73 2 7 178 5 176 5.77e-57 195
Msa0724450 MtrunA17_Chr8g0342741 48.045 179 90 1 11 186 5 183 9.50e-57 189
Msa0724450 MtrunA17_Chr1g0172811 51.786 168 80 1 12 178 16 183 3.56e-56 193
Msa0724450 MtrunA17_Chr8g0350121 51.412 177 81 2 12 186 13 186 6.22e-56 184
Msa0724450 MtrunA17_Chr4g0020591 50.847 177 86 1 6 182 9 184 1.72e-55 191
Msa0724450 MtrunA17_Chr8g0342691 48.603 179 89 1 11 186 5 183 2.01e-55 191
Msa0724450 MtrunA17_Chr8g0342911 47.826 184 93 1 6 186 19 202 2.83e-55 190
Msa0724450 MtrunA17_Chr8g0342781 46.277 188 97 2 11 195 5 191 3.30e-55 186
Msa0724450 MtrunA17_Chr4g0005351 48.588 177 89 1 4 180 81 255 4.26e-55 181
Msa0724450 MtrunA17_Chr8g0342641 50.829 181 84 1 12 187 6 186 2.25e-54 187
Msa0724450 MtrunA17_Chr8g0350091 49.162 179 86 2 10 186 9 184 2.64e-54 180
Msa0724450 MtrunA17_Chr8g0342621 50.543 184 86 2 8 186 2 185 3.92e-54 187
Msa0724450 MtrunA17_Chr8g0338831 47.222 180 89 2 10 183 10 189 4.63e-54 177
Msa0724450 MtrunA17_Chr8g0342161 48.603 179 88 2 11 186 14 191 5.62e-54 178
Msa0724450 MtrunA17_Chr3g0104861 48.837 172 85 1 6 177 9 177 5.67e-54 184
Msa0724450 MtrunA17_Chr8g0353001 49.735 189 92 1 1 186 1 189 2.19e-53 184
Msa0724450 MtrunA17_Chr4g0041611 49.500 200 96 3 4 199 10 208 2.63e-53 184
Msa0724450 MtrunA17_Chr8g0343631 45.813 203 101 3 4 200 24 223 3.25e-53 184
Msa0724450 MtrunA17_Chr8g0342201 48.913 184 87 3 8 186 45 226 5.17e-53 181
Msa0724450 MtrunA17_Chr2g0296471 44.271 192 98 2 1 183 1 192 4.03e-52 168
Msa0724450 MtrunA17_Chr2g0330131 50.633 158 77 1 1 158 1 157 5.57e-52 166
Msa0724450 MtrunA17_Chr8g0372681 47.802 182 94 1 5 186 7 187 8.57e-52 180
Msa0724450 MtrunA17_Chr3g0081531 52.695 167 77 2 14 179 7 172 1.03e-51 180
Msa0724450 MtrunA17_Chr2g0302011 45.408 196 104 2 6 200 30 223 1.51e-51 174
Msa0724450 MtrunA17_Chr8g0348541 53.012 166 76 2 14 178 24 188 2.16e-51 179
Msa0724450 MtrunA17_Chr5g0443751 47.727 176 90 2 13 187 328 502 8.83e-51 172
Msa0724450 MtrunA17_Chr4g0005731 45.078 193 102 2 6 196 2 192 1.09e-50 175
Msa0724450 MtrunA17_Chr6g0454971 48.000 175 88 2 14 185 49 223 1.56e-50 176
Msa0724450 MtrunA17_Chr6g0455551 50.000 172 81 2 12 180 45 214 1.74e-50 176
Msa0724450 MtrunA17_Chr3g0084771 46.409 181 94 3 4 181 5 185 1.76e-50 170
Msa0724450 MtrunA17_Chr5g0443781 55.245 143 63 1 13 154 148 290 2.42e-50 167
Msa0724450 MtrunA17_Chr6g0454961 55.333 150 66 1 12 160 42 191 2.89e-50 176
Msa0724450 MtrunA17_Chr4g0005101 46.766 201 95 4 7 198 48 245 3.32e-50 176
Msa0724450 MtrunA17_Chr6g0478841 45.989 187 92 3 11 193 4 185 4.80e-50 175
Msa0724450 MtrunA17_Chr6g0478771 45.455 187 93 3 11 193 4 185 7.00e-50 174
Msa0724450 MtrunA17_Chr6g0455211 48.901 182 76 4 14 180 39 218 9.33e-50 174
Msa0724450 MtrunA17_Chr6g0479631 45.946 185 90 4 13 193 17 195 9.45e-50 174
Msa0724450 MtrunA17_Chr6g0455131 49.143 175 78 3 14 181 87 257 9.80e-50 174
Msa0724450 MtrunA17_Chr7g0256881 49.432 176 87 2 4 178 2 176 1.28e-49 174
Msa0724450 MtrunA17_Chr6g0479641 49.123 171 83 2 14 180 18 188 1.67e-49 174
Msa0724450 MtrunA17_Chr6g0482511 46.561 189 99 2 14 200 33 221 1.84e-49 173
Msa0724450 MtrunA17_Chr8g0351551 47.917 192 89 3 1 186 3 189 1.85e-49 174
Msa0724450 MtrunA17_Chr6g0454821 50.282 177 76 4 14 180 41 215 1.95e-49 173
Msa0724450 MtrunA17_Chr7g0243021 42.029 207 118 2 4 209 3 208 3.82e-49 165
Msa0724450 MtrunA17_Chr6g0480461 46.448 183 94 2 2 180 6 188 3.91e-49 172
Msa0724450 MtrunA17_Chr6g0480451 47.953 171 85 2 14 180 82 252 3.93e-49 172
Msa0724450 MtrunA17_Chr8g0339031 46.328 177 90 3 8 179 10 186 4.33e-49 172
Msa0724450 MtrunA17_Chr6g0480271 48.837 172 84 2 13 180 17 188 4.62e-49 171
Msa0724450 MtrunA17_Chr6g0479001 44.385 187 95 3 11 193 4 185 5.13e-49 172
Msa0724450 MtrunA17_Chr6g0479731 49.711 173 81 4 13 181 17 187 5.54e-49 171
Msa0724450 MtrunA17_Chr8g0342131 45.876 194 98 2 12 200 16 207 6.59e-49 171
Msa0724450 MtrunA17_Chr2g0300251 44.724 199 99 4 15 202 19 217 7.26e-49 172
Msa0724450 MtrunA17_Chr6g0480521 48.538 171 84 2 14 180 18 188 7.32e-49 172
Msa0724450 MtrunA17_Chr6g0479701 45.455 198 97 4 14 200 22 219 8.46e-49 171
Msa0724450 MtrunA17_Chr6g0479051 44.920 187 94 3 11 193 4 185 1.07e-48 171
Msa0724450 MtrunA17_Chr3g0084731 52.941 153 71 1 4 155 7 159 1.10e-48 171
Msa0724450 MtrunA17_Chr6g0479591 42.795 229 97 4 11 210 15 238 1.14e-48 171
Msa0724450 MtrunA17_Chr8g0343671 42.365 203 108 3 4 200 47 246 1.18e-48 171
Msa0724450 MtrunA17_Chr6g0480061 52.000 150 67 3 14 158 20 169 1.20e-48 158
Msa0724450 MtrunA17_Chr4g0005401 44.633 177 96 2 4 180 17 191 1.33e-48 171
Msa0724450 MtrunA17_Chr5g0444331 47.674 172 88 2 13 183 363 533 1.95e-48 167
Msa0724450 MtrunA17_Chr6g0481001 49.721 179 83 4 14 185 20 198 2.40e-48 170
Msa0724450 MtrunA17_Chr8g0371711 48.889 180 88 3 14 191 20 197 3.75e-48 170
Msa0724450 MtrunA17_Chr6g0479621 46.739 184 88 4 14 193 20 197 4.94e-48 169
Msa0724450 MtrunA17_Chr6g0481011 50.838 179 81 4 14 185 23 201 6.42e-48 169
Msa0724450 MtrunA17_Chr2g0299841 45.556 180 96 2 14 191 55 234 7.52e-48 169
Msa0724450 MtrunA17_Chr6g0480041 47.368 171 85 3 14 180 18 187 7.53e-48 169
Msa0724450 MtrunA17_Chr6g0455251 47.619 168 87 1 14 180 26 193 8.44e-48 169
Msa0724450 MtrunA17_Chr3g0084851 47.253 182 92 4 4 181 8 189 8.58e-48 169
Msa0724450 MtrunA17_Chr6g0455031 49.405 168 84 1 14 180 30 197 1.26e-47 168
Msa0724450 MtrunA17_Chr8g0343581 44.633 177 96 1 5 181 55 229 1.35e-47 168
Msa0724450 MtrunA17_Chr2g0299921 44.041 193 100 4 1 191 6 192 1.47e-47 168
Msa0724450 MtrunA17_Chr3g0084841 46.703 182 93 4 4 181 8 189 1.66e-47 168
Msa0724450 MtrunA17_Chr5g0443861 53.793 145 66 1 11 154 378 522 1.76e-47 164
Msa0724450 MtrunA17_Chr5g0443871 51.553 161 76 2 15 174 370 529 2.27e-47 164
Msa0724450 MtrunA17_Chr6g0479821 45.408 196 96 4 15 199 20 215 2.57e-47 167
Msa0724450 MtrunA17_Chr3g0084721 47.486 179 91 3 6 181 10 188 2.60e-47 167
Msa0724450 MtrunA17_Chr8g0342221 47.170 159 81 1 6 161 12 170 2.82e-47 166
Msa0724450 MtrunA17_Chr5g0443941 50.932 161 77 2 15 174 370 529 4.32e-47 163
Msa0724450 MtrunA17_Chr6g0480091 45.405 185 91 4 13 193 17 195 5.38e-47 161
Msa0724450 MtrunA17_Chr6g0481141 46.552 174 88 3 14 183 69 241 8.15e-47 166
Msa0724450 MtrunA17_Chr2g0299851 41.451 193 111 2 1 191 1 193 1.13e-46 166
Msa0724450 MtrunA17_Chr2g0299561 44.324 185 95 3 1 178 1 184 1.24e-46 166
Msa0724450 MtrunA17_Chr4g0006771 44.560 193 100 3 14 199 19 211 1.82e-46 165
Msa0724450 MtrunA17_Chr4g0005871 47.753 178 89 3 12 185 131 308 1.90e-46 165
Msa0724450 MtrunA17_Chr4g0005261 43.182 176 98 1 5 180 2 175 2.03e-46 165
Msa0724450 MtrunA17_Chr4g0042011 46.591 176 92 2 5 179 15 189 2.18e-46 165
Msa0724450 MtrunA17_Chr6g0455191 45.304 181 93 2 14 193 317 492 3.03e-46 164
Msa0724450 MtrunA17_Chr6g0455191 41.566 166 94 2 12 175 62 226 1.41e-33 128
Msa0724450 MtrunA17_Chr4g0005391 47.904 167 85 1 13 179 61 225 3.77e-46 164
Msa0724450 MtrunA17_Chr6g0464011 40.594 202 108 4 8 206 2 194 4.08e-46 155
Msa0724450 MtrunA17_Chr6g0464011 50.000 116 57 1 14 128 189 304 9.39e-35 126
Msa0724450 MtrunA17_Chr4g0025831 49.123 171 82 3 14 180 18 187 4.60e-46 164
Msa0724450 MtrunA17_Chr4g0041231 44.886 176 93 3 10 182 16 190 7.37e-46 163
Msa0724450 MtrunA17_Chr2g0299791 40.415 193 113 2 1 191 1 193 8.38e-46 163
Msa0724450 MtrunA17_Chr6g0480951 47.977 173 85 3 14 181 20 192 8.88e-46 155
Msa0724450 MtrunA17_Chr6g0478741 43.316 187 97 3 11 193 4 185 9.29e-46 162
Msa0724450 MtrunA17_Chr4g0041441 48.466 163 82 2 13 174 4 165 1.19e-45 162
Msa0724450 MtrunA17_Chr8g0342671 43.316 187 98 2 8 186 3 189 1.23e-45 162
Msa0724450 MtrunA17_Chr4g0041241 44.886 176 93 3 10 182 16 190 1.26e-45 162
Msa0724450 MtrunA17_Chr2g0299881 42.778 180 101 2 14 191 18 197 1.34e-45 162
Msa0724450 MtrunA17_Chr2g0298301 54.887 133 57 2 1 130 7 139 1.34e-45 149
Msa0724450 MtrunA17_Chr6g0482111 46.707 167 87 2 14 179 15 180 1.53e-45 162
Msa0724450 MtrunA17_Chr6g0479671 43.939 198 101 4 1 193 3 195 1.71e-45 162
Msa0724450 MtrunA17_Chr5g0443771 50.000 164 76 3 13 173 224 384 2.07e-45 156
Msa0724450 MtrunA17_Chr5g0430531 42.697 178 97 2 11 183 4 181 2.29e-45 157
Msa0724450 MtrunA17_Chr8g0354711 44.767 172 93 2 10 180 5 175 2.48e-45 162
Msa0724450 MtrunA17_Chr6g0484161 48.148 189 89 4 13 193 17 204 2.53e-45 162
Msa0724450 MtrunA17_Chr4g0025701 46.784 171 86 3 14 180 18 187 3.43e-45 160
Msa0724450 MtrunA17_Chr6g0479651 43.243 185 101 2 14 194 20 204 5.57e-45 160
Msa0724450 MtrunA17_Chr6g0478451 43.000 200 103 4 14 202 20 219 6.02e-45 160
Msa0724450 MtrunA17_Chr4g0025811 48.538 171 83 3 14 180 18 187 6.76e-45 160
Msa0724450 MtrunA17_Chr5g0443851 52.448 143 67 1 13 154 362 504 6.88e-45 157
Msa0724450 MtrunA17_Chr7g0242751 40.526 190 111 2 12 200 44 232 7.11e-45 160
Msa0724450 MtrunA17_Chr7g0242811 41.799 189 108 2 13 200 42 229 8.80e-45 160
Msa0724450 MtrunA17_Chr8g0352211 45.699 186 92 4 1 178 1 185 9.48e-45 160
Msa0724450 MtrunA17_Chr7g0242801 42.132 197 111 3 13 207 87 282 1.17e-44 160
Msa0724450 MtrunA17_Chr6g0455221 44.974 189 92 4 5 189 2 182 1.24e-44 160
Msa0724450 MtrunA17_Chr8g0352221 45.699 186 96 2 1 181 1 186 1.54e-44 159
Msa0724450 MtrunA17_Chr6g0486451 43.114 167 94 1 7 172 13 179 1.89e-44 151
Msa0724450 MtrunA17_Chr6g0481221 45.029 171 89 3 14 180 18 187 2.18e-44 156
Msa0724450 MtrunA17_Chr3g0084151 48.667 150 73 2 7 155 10 156 2.34e-44 159
Msa0724450 MtrunA17_Chr6g0451551 52.817 142 66 1 14 154 19 160 2.53e-44 159
Msa0724450 MtrunA17_Chr6g0451551 44.099 161 87 2 24 181 170 330 1.01e-40 148
Msa0724450 MtrunA17_Chr4g0010521 49.112 169 84 2 14 181 10 177 2.64e-44 159
Msa0724450 MtrunA17_Chr4g0041951 43.820 178 98 2 6 182 70 246 2.69e-44 159
Msa0724450 MtrunA17_Chr1g0153511 46.023 176 85 4 1 174 1 168 2.81e-44 159
Msa0724450 MtrunA17_Chr6g0479781 41.667 204 107 5 6 200 8 208 2.94e-44 149
Msa0724450 MtrunA17_Chr5g0443931 50.000 160 78 2 15 173 370 528 3.00e-44 155
Msa0724450 MtrunA17_Chr6g0454931 42.051 195 87 4 12 180 48 242 3.05e-44 158
Msa0724450 MtrunA17_Chr6g0486301 46.386 166 87 2 14 178 20 184 3.50e-44 158
Msa0724450 MtrunA17_Chr4g0005291 44.633 177 96 1 3 179 61 235 3.92e-44 158
Msa0724450 MtrunA17_Chr5g0444051 49.419 172 82 3 13 181 187 356 4.30e-44 151
Msa0724450 MtrunA17_Chr5g0444051 40.571 175 96 4 13 180 14 187 8.56e-37 132
Msa0724450 MtrunA17_Chr8g0368251 42.289 201 106 4 14 210 18 212 4.87e-44 158
Msa0724450 MtrunA17_Chr4g0025741 46.784 171 86 3 14 180 18 187 6.81e-44 157
Msa0724450 MtrunA17_Chr5g0420331 43.646 181 91 3 4 179 2 176 9.45e-44 157
Msa0724450 MtrunA17_Chr7g0248511 46.512 172 90 2 8 178 20 190 1.05e-43 157
Msa0724450 MtrunA17_Chr6g0485991 44.379 169 93 1 7 174 13 181 1.15e-43 157
Msa0724450 MtrunA17_Chr6g0480311 46.341 164 84 2 21 180 12 175 1.53e-43 156
Msa0724450 MtrunA17_Chr6g0454851 45.902 183 72 5 14 178 89 262 2.15e-43 156
Msa0724450 MtrunA17_Chr4g0005851 44.262 183 88 4 12 185 35 212 2.50e-43 156
Msa0724450 MtrunA17_Chr4g0025751 46.784 171 86 3 14 180 18 187 2.53e-43 156
Msa0724450 MtrunA17_Chr1g0146421 45.029 171 89 3 14 180 18 187 3.20e-43 155
Msa0724450 MtrunA17_Chr6g0480181 45.614 171 88 3 14 180 11 180 3.44e-43 155
Msa0724450 MtrunA17_Chr6g0480911 39.535 215 125 3 4 213 8 222 4.68e-43 155
Msa0724450 MtrunA17_Chr6g0486271 43.353 173 96 2 7 178 13 184 5.16e-43 154
Msa0724450 MtrunA17_Chr6g0454951 44.134 179 82 3 14 178 82 256 5.82e-43 155
Msa0724450 MtrunA17_Chr8g0354701 43.784 185 97 4 14 191 9 193 6.66e-43 155
Msa0724450 MtrunA17_Chr7g0248121 45.783 166 88 2 14 178 20 184 8.13e-43 154
Msa0724450 MtrunA17_Chr6g0486221 43.784 185 96 4 1 178 1 184 1.26e-42 154
Msa0724450 MtrunA17_Chr4g0010651 48.503 167 83 3 14 178 11 176 2.53e-42 153
Msa0724450 MtrunA17_Chr6g0486521 44.311 167 91 2 14 179 20 185 3.54e-42 152
Msa0724450 MtrunA17_Chr6g0482141 47.682 151 78 1 6 155 10 160 3.77e-42 152
Msa0724450 MtrunA17_Chr4g0005891 42.211 199 90 5 12 185 25 223 4.00e-42 152
Msa0724450 MtrunA17_Chr4g0041941 44.041 193 102 4 11 198 6 197 4.37e-42 152
Msa0724450 MtrunA17_Chr6g0486731 43.353 173 96 2 7 178 13 184 5.60e-42 152
Msa0724450 MtrunA17_Chr3g0085731 43.575 179 95 3 11 183 17 195 9.69e-42 151
Msa0724450 MtrunA17_Chr6g0486361 43.976 166 91 2 14 178 20 184 1.14e-41 151
Msa0724450 MtrunA17_Chr3g0085541 45.665 173 89 3 11 178 16 188 1.37e-41 150
Msa0724450 MtrunA17_Chr7g0248521 46.386 166 86 3 14 178 20 183 1.43e-41 151
Msa0724450 MtrunA17_Chr2g0319821 41.885 191 106 3 13 199 43 232 2.02e-41 150
Msa0724450 MtrunA17_Chr5g0420341 43.094 181 92 3 4 179 2 176 3.48e-41 150
Msa0724450 MtrunA17_Chr8g0343801 41.954 174 96 3 10 179 9 181 3.55e-41 147
Msa0724450 MtrunA17_Chr8g0338881 44.444 171 91 3 14 180 36 206 4.51e-41 149
Msa0724450 MtrunA17_Chr6g0454831 43.503 177 97 2 12 185 7 183 7.66e-41 149
Msa0724450 MtrunA17_Chr8g0350801 43.011 186 100 4 6 185 2 187 9.45e-41 148
Msa0724450 MtrunA17_Chr8g0354681 44.318 176 89 4 14 180 9 184 1.16e-40 148
Msa0724450 MtrunA17_Chr7g0242771 44.218 147 78 2 11 156 13 156 1.46e-40 137
Msa0724450 MtrunA17_Chr8g0354721 43.529 170 93 3 14 180 9 178 1.93e-40 147
Msa0724450 MtrunA17_Chr6g0486481 43.373 166 92 2 14 178 20 184 2.78e-40 147
Msa0724450 MtrunA17_Chr6g0480381 38.571 210 118 4 1 199 10 219 6.06e-40 143
Msa0724450 MtrunA17_Chr4g0041931 42.786 201 104 4 8 199 14 212 6.75e-40 146
Msa0724450 MtrunA17_Chr8g0338901 41.860 172 92 3 14 183 36 201 9.23e-40 145
Msa0724450 MtrunA17_Chr6g0486311 42.857 154 87 1 14 166 20 173 1.19e-39 145
Msa0724450 MtrunA17_Chr5g0442761 44.379 169 89 3 14 177 15 183 1.97e-39 145
Msa0724450 MtrunA17_Chr4g0005331 39.130 207 106 3 4 202 81 275 3.23e-39 144
Msa0724450 MtrunA17_Chr8g0370511 40.351 171 91 3 14 179 11 175 3.38e-39 144
Msa0724450 MtrunA17_Chr6g0482411 44.586 157 81 3 7 162 5 156 6.73e-39 132
Msa0724450 MtrunA17_Chr6g0482161 39.894 188 104 4 3 185 6 189 1.04e-38 141
Msa0724450 MtrunA17_Chr8g0353371 38.679 212 117 4 14 220 11 214 1.15e-38 142
Msa0724450 MtrunA17_Chr8g0363591 61.538 104 40 0 139 242 4 107 1.27e-38 130
Msa0724450 MtrunA17_Chr8g0338981 38.660 194 109 4 1 191 1 187 2.69e-38 141
Msa0724450 MtrunA17_Chr8g0339011 39.106 179 91 3 10 183 10 175 5.24e-38 140
Msa0724450 MtrunA17_Chr5g0394051 40.000 180 103 3 13 191 24 199 7.65e-38 136
Msa0724450 MtrunA17_Chr6g0482471 41.530 183 103 3 7 185 5 187 1.27e-37 139
Msa0724450 MtrunA17_Chr3g0077971 41.573 178 97 3 6 181 2 174 1.37e-37 139
Msa0724450 MtrunA17_Chr6g0478991 47.541 122 63 1 11 131 4 125 2.48e-37 127
Msa0724450 MtrunA17_Chr6g0482351 40.984 183 104 3 7 185 5 187 2.85e-37 139
Msa0724450 MtrunA17_Chr8g0339021 43.396 159 87 2 22 179 13 169 3.27e-37 138
Msa0724450 MtrunA17_Chr6g0480971 48.201 139 68 2 47 181 42 180 7.07e-37 130
Msa0724450 MtrunA17_Chr1g0172541 41.304 184 99 4 6 185 2 180 7.57e-37 137
Msa0724450 MtrunA17_Chr6g0482321 42.697 178 96 4 7 181 5 179 7.59e-37 137
Msa0724450 MtrunA17_Chr4g0009401 39.888 178 105 2 5 180 495 672 1.22e-36 137
Msa0724450 MtrunA17_Chr4g0009401 29.412 170 115 5 14 181 5 171 3.69e-12 65.9
Msa0724450 MtrunA17_Chr2g0319921 43.421 152 85 1 6 156 48 199 1.36e-36 136
Msa0724450 MtrunA17_Chr4g0009171 39.665 179 102 3 5 180 724 899 2.32e-36 136
Msa0724450 MtrunA17_Chr4g0009171 35.928 167 107 0 14 180 7 173 4.82e-31 120
Msa0724450 MtrunA17_Chr4g0009141 35.023 217 133 4 1 209 512 728 2.34e-36 136
Msa0724450 MtrunA17_Chr4g0009141 30.357 168 88 7 5 154 7 163 1.15e-12 67.4
Msa0724450 MtrunA17_Chr5g0414681 37.297 185 89 4 4 161 2 186 2.86e-36 126
Msa0724450 MtrunA17_Chr6g0455121 50.435 115 57 0 47 161 15 129 6.78e-36 124
Msa0724450 MtrunA17_Chr7g0255681 39.548 177 100 3 14 185 1016 1190 8.07e-36 134
Msa0724450 MtrunA17_Chr7g0255681 39.412 170 98 2 14 180 514 681 2.46e-35 133
Msa0724450 MtrunA17_Chr7g0255681 33.659 205 117 5 10 210 16 205 8.62e-22 94.0
Msa0724450 MtrunA17_Chr8g0363871 40.845 142 79 2 15 155 18 155 1.27e-35 124
Msa0724450 MtrunA17_Chr7g0223531 39.326 178 97 5 13 179 9 186 1.71e-35 133
Msa0724450 MtrunA17_Chr4g0009241 37.079 178 111 1 4 180 538 715 2.01e-35 133
Msa0724450 MtrunA17_Chr4g0009241 32.215 149 73 6 11 139 16 156 2.50e-13 69.3
Msa0724450 MtrunA17_Chr6g0480151 41.279 172 92 3 15 180 19 187 2.14e-35 133
Msa0724450 MtrunA17_Chr2g0319851 39.378 193 105 6 13 199 54 240 2.77e-35 133
Msa0724450 MtrunA17_Chr6g0482491 44.318 176 85 6 14 185 10 176 6.05e-35 132
Msa0724450 MtrunA17_Chr4g0010711 38.983 177 101 3 14 185 519 693 7.65e-35 131
Msa0724450 MtrunA17_Chr4g0010711 36.184 152 89 3 9 155 11 159 2.09e-23 98.6
Msa0724450 MtrunA17_Chr4g0009101 38.333 180 106 2 4 180 534 711 1.31e-34 131
Msa0724450 MtrunA17_Chr4g0009271 39.752 161 93 3 6 162 17 177 1.33e-34 122
Msa0724450 MtrunA17_Chr4g0009041 37.778 180 107 2 4 180 504 681 1.71e-34 130
Msa0724450 MtrunA17_Chr4g0009041 32.680 153 90 6 4 155 16 156 1.87e-13 69.7
Msa0724450 MtrunA17_Chr4g0009301 38.202 178 109 1 4 180 536 713 3.19e-34 130
Msa0724450 MtrunA17_Chr4g0009301 34.839 155 89 7 4 155 16 161 1.73e-16 78.6
Msa0724450 MtrunA17_Chr2g0319911 43.357 143 78 3 6 146 39 180 1.13e-33 120
Msa0724450 MtrunA17_Chr8g0363271 60.577 104 41 0 139 242 4 107 2.61e-32 114
Msa0724450 MtrunA17_Chr6g0482441 39.130 184 103 5 6 185 2 180 2.79e-32 124
Msa0724450 MtrunA17_Chr6g0474761 42.763 152 86 1 4 154 7 158 2.52e-31 121
Msa0724450 MtrunA17_Chr6g0481331 36.723 177 106 3 4 174 48 224 2.88e-30 118
Msa0724450 MtrunA17_Chr4g0005591 36.458 192 99 7 7 185 71 252 5.13e-30 117
Msa0724450 MtrunA17_Chr5g0443951 54.839 93 42 0 47 139 3 95 2.82e-29 106
Msa0724450 MtrunA17_Chr8g0353351 40.116 172 89 5 13 174 14 181 3.30e-29 114
Msa0724450 MtrunA17_Chr6g0474801 38.816 152 92 1 4 154 7 158 4.82e-29 114
Msa0724450 MtrunA17_Chr8g0353361 39.535 172 90 5 13 174 14 181 5.02e-29 114
Msa0724450 MtrunA17_Chr6g0454921 53.488 86 39 1 15 99 123 208 9.04e-28 105
Msa0724450 MtrunA17_Chr6g0479831 40.496 121 69 1 37 154 62 182 7.36e-27 103
Msa0724450 MtrunA17_Chr5g0443961 50.495 101 47 2 4 103 164 262 2.91e-24 97.8
Msa0724450 MtrunA17_Chr5g0443961 39.091 110 66 1 71 180 63 171 2.12e-23 95.5
Msa0724450 MtrunA17_Chr8g0353401 35.393 178 89 6 13 174 11 178 9.29e-24 99.4
Msa0724450 MtrunA17_Chr4g0005381 43.056 72 41 0 4 75 81 152 3.84e-16 73.2
Msa0724450 MtrunA17_Chr8g0338851 41.304 92 50 1 92 179 1 92 1.27e-15 75.5
Msa0724450 MtrunA17_Chr5g0443921 52.308 65 30 1 16 79 25 89 3.14e-14 66.6
Msa0724450 MtrunA17_Chr2g0281751 33.333 171 94 6 11 178 10 163 6.18e-14 67.8
Msa0724450 MtrunA17_Chr8g0353431 30.108 186 99 9 16 192 17 180 7.55e-14 70.5
Msa0724450 MtrunA17_Chr2g0281761 29.221 154 90 4 11 151 10 157 1.41e-13 66.6
Msa0724450 MtrunA17_Chr7g0234891 33.010 103 67 1 85 185 1 103 1.06e-11 63.9
Msa0724450 MtrunA17_Chr8g0362971 51.429 70 34 0 173 242 2 71 2.64e-11 58.2
Msa0724450 MtrunA17_Chr7g0231661 60.976 41 16 0 89 129 1 41 8.69e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0724450 AT2G20142.1 43.678 174 93 2 7 180 2 170 1.11e-46 157
Msa0724450 AT1G63880.2 41.885 191 109 1 1 191 1 189 1.82e-41 150
Msa0724450 AT5G41540.1 43.367 196 107 2 5 199 2 194 2.07e-41 150
Msa0724450 AT4G16990.1 47.093 172 87 2 8 178 3 171 2.55e-41 149
Msa0724450 AT4G16990.6 47.093 172 87 2 8 178 3 171 2.65e-41 149
Msa0724450 AT4G16990.11 47.093 172 87 2 8 178 3 171 2.65e-41 149
Msa0724450 AT1G63880.1 41.885 191 109 1 1 191 1 189 3.31e-41 150
Msa0724450 AT5G44510.3 40.659 182 98 2 14 191 40 215 4.20e-41 150
Msa0724450 AT5G44510.1 40.659 182 98 2 14 191 40 215 4.43e-41 150
Msa0724450 AT5G44510.4 40.659 182 98 2 14 191 40 215 4.79e-41 150
Msa0724450 AT4G16990.12 47.093 172 87 2 8 178 3 171 5.04e-41 149
Msa0724450 AT4G16990.7 47.093 172 87 2 8 178 3 171 5.04e-41 149
Msa0724450 AT4G16990.17 47.093 172 87 2 8 178 3 171 5.38e-41 149
Msa0724450 AT4G16990.10 47.093 172 87 2 8 178 3 171 5.38e-41 149
Msa0724450 AT5G44510.2 40.659 182 98 2 14 191 40 215 5.40e-41 149
Msa0724450 AT4G16990.13 47.093 172 87 2 8 178 3 171 5.49e-41 149
Msa0724450 AT4G16990.2 47.093 172 87 2 8 178 3 171 5.49e-41 149
Msa0724450 AT5G18350.1 40.099 202 115 3 2 200 6 204 6.07e-41 149
Msa0724450 AT5G17680.2 45.509 167 82 3 13 178 17 175 6.35e-41 149
Msa0724450 AT5G36930.4 44.767 172 90 4 14 183 14 182 1.50e-40 148
Msa0724450 AT5G36930.1 44.767 172 90 4 14 183 14 182 1.50e-40 148
Msa0724450 AT5G36930.2 44.767 172 90 4 14 183 17 185 1.56e-40 148
Msa0724450 AT4G16950.2 41.808 177 101 1 4 178 2 178 1.60e-40 148
Msa0724450 AT4G16950.5 41.808 177 101 1 4 178 2 178 1.66e-40 148
Msa0724450 AT1G65850.1 39.888 178 105 2 2 179 21 196 1.67e-40 148
Msa0724450 AT3G44630.2 41.071 168 95 2 13 179 93 257 1.68e-40 148
Msa0724450 AT3G44630.1 41.071 168 95 2 13 179 93 257 1.68e-40 148
Msa0724450 AT3G44630.4 41.071 168 95 2 13 179 93 257 1.68e-40 148
Msa0724450 AT4G16950.6 41.808 177 101 1 4 178 2 178 1.72e-40 148
Msa0724450 AT4G16950.3 41.808 177 101 1 4 178 2 178 1.75e-40 148
Msa0724450 AT4G16950.1 41.808 177 101 1 4 178 2 178 1.76e-40 148
Msa0724450 AT5G36930.3 44.767 172 90 4 14 183 14 182 1.80e-40 148
Msa0724450 AT3G44630.3 41.071 168 95 2 13 179 93 257 1.82e-40 148
Msa0724450 AT4G16950.4 41.808 177 101 1 4 178 2 178 2.01e-40 148
Msa0724450 AT5G17680.1 46.108 167 80 4 13 178 17 174 2.54e-40 147
Msa0724450 AT5G49140.1 43.617 188 100 3 13 199 14 196 2.57e-40 147
Msa0724450 AT4G16990.8 48.193 166 82 2 14 178 76 238 2.74e-40 147
Msa0724450 AT3G04220.1 37.824 193 111 3 12 200 61 248 3.12e-40 147
Msa0724450 AT1G64070.1 41.451 193 101 3 13 200 13 198 3.16e-40 147
Msa0724450 AT3G04220.2 37.824 193 111 3 12 200 61 248 3.71e-40 147
Msa0724450 AT3G04220.3 37.824 193 111 3 12 200 61 248 3.81e-40 147
Msa0724450 AT5G41750.1 38.614 202 110 4 5 200 4 197 3.86e-40 147
Msa0724450 AT5G41750.2 38.614 202 110 4 5 200 4 197 3.86e-40 147
Msa0724450 AT5G41550.1 40.796 201 114 3 1 200 1 197 4.92e-40 147
Msa0724450 AT4G14370.2 37.566 189 116 1 13 201 13 199 6.78e-40 146
Msa0724450 AT4G14370.3 37.566 189 116 1 13 201 13 199 6.78e-40 146
Msa0724450 AT3G44480.2 38.857 175 103 2 6 179 90 261 1.24e-39 145
Msa0724450 AT4G11170.1 39.320 206 103 4 5 200 2 195 1.35e-39 145
Msa0724450 AT1G63730.1 39.901 203 109 4 4 200 2 197 1.36e-39 145
Msa0724450 AT3G44480.4 38.636 176 104 2 5 179 89 261 1.44e-39 145
Msa0724450 AT3G44480.1 38.636 176 104 2 5 179 89 261 1.44e-39 145
Msa0724450 AT3G44480.3 38.636 176 104 2 5 179 89 261 1.58e-39 145
Msa0724450 AT3G44480.5 38.636 176 104 2 5 179 89 261 1.58e-39 145
Msa0724450 AT5G58120.1 40.415 193 103 3 13 200 14 199 2.09e-39 145
Msa0724450 AT1G65850.2 41.566 166 95 2 14 179 48 211 2.32e-39 145
Msa0724450 AT1G72930.1 45.349 172 89 4 7 177 2 169 2.69e-39 134
Msa0724450 AT5G51630.3 45.143 175 92 2 5 178 2 173 3.23e-39 144
Msa0724450 AT5G51630.1 45.143 175 92 2 5 178 2 173 3.28e-39 144
Msa0724450 AT4G16920.1 42.135 178 96 2 1 178 1 171 5.31e-39 144
Msa0724450 AT4G16920.9 42.135 178 96 2 1 178 1 171 5.31e-39 144
Msa0724450 AT1G72900.1 45.714 175 90 5 6 178 2 173 5.51e-39 139
Msa0724450 AT4G16920.6 42.135 178 96 2 1 178 1 171 5.58e-39 144
Msa0724450 AT4G16920.4 42.135 178 96 2 1 178 1 171 5.85e-39 144
Msa0724450 AT4G16920.7 42.135 178 96 2 1 178 1 171 5.85e-39 144
Msa0724450 AT4G16920.3 42.135 178 96 2 1 178 1 171 6.23e-39 144
Msa0724450 AT4G16920.5 42.135 178 96 2 1 178 1 171 6.23e-39 144
Msa0724450 AT4G16920.2 42.135 178 96 2 1 178 1 171 6.42e-39 144
Msa0724450 AT4G16920.8 42.135 178 96 2 1 178 1 171 6.42e-39 144
Msa0724450 AT1G56520.5 38.384 198 119 2 4 200 2 197 7.76e-39 142
Msa0724450 AT1G56520.1 38.384 198 119 2 4 200 2 197 1.21e-38 143
Msa0724450 AT1G56520.4 38.384 198 119 2 4 200 2 197 1.31e-38 142
Msa0724450 AT1G56520.2 38.384 198 119 2 4 200 2 197 1.55e-38 142
Msa0724450 AT1G56540.1 40.426 188 110 1 13 200 14 199 2.10e-38 142
Msa0724450 AT1G63860.4 39.500 200 119 1 1 200 1 198 2.74e-38 142
Msa0724450 AT1G63860.5 39.500 200 119 1 1 200 1 198 2.74e-38 142
Msa0724450 AT1G63860.3 39.500 200 119 1 1 200 1 198 2.74e-38 142
Msa0724450 AT1G63860.1 39.500 200 119 1 1 200 1 198 3.08e-38 142
Msa0724450 AT1G56510.1 39.153 189 112 2 4 191 2 188 3.09e-38 142
Msa0724450 AT4G08450.2 40.113 177 100 3 5 181 2 172 3.14e-38 142
Msa0724450 AT4G08450.1 40.113 177 100 3 5 181 2 172 3.27e-38 142
Msa0724450 AT1G63860.2 39.500 200 119 1 1 200 1 198 3.51e-38 141
Msa0724450 AT5G18370.1 39.665 179 104 2 14 191 61 236 3.55e-38 141
Msa0724450 AT4G12010.1 43.820 178 93 4 6 179 3 177 3.73e-38 141
Msa0724450 AT1G17615.1 45.714 175 91 3 8 181 10 181 3.91e-38 137
Msa0724450 AT1G63860.6 39.500 200 119 1 1 200 1 198 3.93e-38 141
Msa0724450 AT3G44400.2 36.224 196 119 4 5 199 39 229 4.32e-38 141
Msa0724450 AT3G44400.1 36.224 196 119 4 5 199 39 229 4.32e-38 141
Msa0724450 AT3G44400.4 36.224 196 119 4 5 199 39 229 4.32e-38 141
Msa0724450 AT3G44400.5 36.224 196 119 4 5 199 39 229 4.32e-38 141
Msa0724450 AT3G44400.3 36.224 196 119 4 5 199 39 229 4.32e-38 141
Msa0724450 AT1G66090.1 38.830 188 113 1 13 200 25 210 5.13e-38 137
Msa0724450 AT3G44670.1 40.120 167 98 1 13 179 93 257 7.04e-38 140
Msa0724450 AT3G44670.2 40.120 167 98 1 13 179 93 257 7.04e-38 140
Msa0724450 AT1G63870.1 37.000 200 124 1 1 200 4 201 1.30e-37 140
Msa0724450 AT5G38850.1 41.146 192 104 4 13 201 8 193 1.70e-37 139
Msa0724450 AT1G63740.2 39.691 194 103 4 13 200 41 226 1.92e-37 139
Msa0724450 AT1G72910.1 46.512 172 87 4 7 177 2 169 2.03e-37 135
Msa0724450 AT4G16990.9 48.428 159 78 2 21 178 16 171 2.04e-37 139
Msa0724450 AT1G27170.1 42.262 168 95 2 13 179 13 179 2.19e-37 139
Msa0724450 AT4G16860.1 42.515 167 94 1 12 178 11 175 2.68e-37 139
Msa0724450 AT1G72950.1 40.796 201 108 5 5 199 4 199 2.75e-37 134
Msa0724450 AT1G72860.1 43.182 176 95 3 4 178 2 173 3.44e-37 139
Msa0724450 AT1G72860.3 43.182 176 95 3 4 178 2 173 3.92e-37 138
Msa0724450 AT5G22690.4 42.169 166 94 1 14 179 10 173 4.29e-37 138
Msa0724450 AT5G22690.3 42.169 166 94 1 14 179 10 173 4.60e-37 138
Msa0724450 AT1G72860.2 43.182 176 95 3 4 178 2 173 4.68e-37 138
Msa0724450 AT5G22690.1 42.169 166 94 1 14 179 10 173 4.73e-37 138
Msa0724450 AT5G22690.2 42.169 166 94 1 14 179 10 173 5.11e-37 138
Msa0724450 AT4G16900.3 40.000 175 103 1 4 178 2 174 5.31e-37 137
Msa0724450 AT4G16900.2 40.000 175 103 1 4 178 2 174 8.67e-37 137
Msa0724450 AT4G16900.1 41.011 178 101 2 1 178 1 174 8.90e-37 137
Msa0724450 AT1G72930.2 48.299 147 72 3 13 158 8 151 9.09e-37 127
Msa0724450 AT1G72920.1 42.857 175 92 4 7 175 2 174 1.33e-36 130
Msa0724450 AT2G14080.1 37.563 197 108 5 11 200 53 241 1.38e-36 137
Msa0724450 AT5G40910.1 40.000 200 114 3 1 199 1 195 1.44e-36 137
Msa0724450 AT5G40910.9 40.000 200 114 3 1 199 1 195 1.44e-36 137
Msa0724450 AT5G11250.2 35.204 196 122 3 14 207 62 254 1.50e-36 137
Msa0724450 AT5G18360.1 44.311 167 88 3 13 179 15 176 1.70e-36 137
Msa0724450 AT1G69550.1 38.182 165 100 1 14 178 80 242 1.76e-36 137
Msa0724450 AT1G72940.1 43.429 175 90 5 8 175 2 174 1.97e-36 132
Msa0724450 AT5G46470.1 37.097 186 115 1 14 199 14 197 4.17e-36 135
Msa0724450 AT2G16870.1 38.049 205 113 5 1 200 1 196 4.32e-36 135
Msa0724450 AT5G46270.2 36.548 197 118 3 4 199 2 192 1.02e-35 134
Msa0724450 AT5G46450.1 35.106 188 118 2 14 200 13 197 1.08e-35 134
Msa0724450 AT5G46270.3 36.548 197 118 3 4 199 2 192 1.10e-35 134
Msa0724450 AT5G46450.3 35.106 188 118 2 14 200 13 197 1.13e-35 134
Msa0724450 AT5G46450.2 35.106 188 118 2 14 200 13 197 1.18e-35 134
Msa0724450 AT4G16960.1 41.420 169 95 2 12 178 11 177 1.45e-35 134
Msa0724450 AT5G46490.1 36.041 197 119 3 4 199 2 192 1.71e-35 129
Msa0724450 AT1G72890.1 45.930 172 87 5 9 178 35 202 2.20e-35 130
Msa0724450 AT1G31540.3 36.735 196 120 2 4 199 2 193 3.70e-35 132
Msa0724450 AT1G31540.1 36.735 196 120 2 4 199 2 193 3.70e-35 132
Msa0724450 AT5G46270.4 37.433 187 110 3 14 199 23 203 4.23e-35 132
Msa0724450 AT5G46270.1 37.433 187 110 3 14 199 23 203 4.65e-35 132
Msa0724450 AT5G46270.5 37.433 187 110 3 14 199 23 203 4.65e-35 132
Msa0724450 AT1G31540.2 36.735 196 120 2 4 199 2 193 5.93e-35 132
Msa0724450 AT5G17970.1 41.860 172 84 4 14 178 16 178 6.20e-35 132
Msa0724450 AT4G19500.1 39.080 174 104 1 5 178 2 173 1.32e-34 131
Msa0724450 AT1G63750.3 36.500 200 125 1 1 200 5 202 2.26e-34 130
Msa0724450 AT5G46260.1 36.548 197 118 3 4 199 2 192 3.03e-34 130
Msa0724450 AT5G46490.8 36.041 197 119 3 4 199 2 192 3.92e-34 129
Msa0724450 AT1G72890.2 48.366 153 74 4 9 160 35 183 3.99e-34 128
Msa0724450 AT4G19510.8 39.683 189 109 2 15 199 58 245 4.24e-34 130
Msa0724450 AT4G19510.1 39.683 189 109 2 15 199 58 245 4.24e-34 130
Msa0724450 AT4G19510.9 39.683 189 109 2 15 199 58 245 4.46e-34 129
Msa0724450 AT4G19510.6 39.683 189 109 2 15 199 58 245 4.54e-34 130
Msa0724450 AT4G19510.5 39.683 189 109 2 15 199 58 245 4.60e-34 130
Msa0724450 AT4G19510.4 39.683 189 109 2 15 199 58 245 4.60e-34 130
Msa0724450 AT4G19510.7 39.683 189 109 2 15 199 58 245 4.60e-34 130
Msa0724450 AT4G19510.3 39.683 189 109 2 15 199 58 245 4.64e-34 129
Msa0724450 AT4G16890.3 39.884 173 99 3 6 177 4 172 4.66e-34 130
Msa0724450 AT4G16890.5 39.884 173 99 3 6 177 4 172 4.83e-34 129
Msa0724450 AT4G16890.2 39.884 173 99 3 6 177 13 181 4.85e-34 129
Msa0724450 AT4G19510.2 39.683 189 109 2 15 199 18 205 4.91e-34 129
Msa0724450 AT4G16890.1 39.884 173 99 3 6 177 13 181 4.93e-34 129
Msa0724450 AT4G19510.10 39.683 189 109 2 15 199 18 205 4.97e-34 129
Msa0724450 AT5G46490.2 36.041 197 119 3 4 199 2 192 8.46e-34 129
Msa0724450 AT5G46520.1 38.636 176 101 3 4 178 2 171 9.25e-34 129
Msa0724450 AT5G38340.3 36.453 203 122 4 1 200 44 242 9.44e-34 129
Msa0724450 AT5G38340.1 36.453 203 122 4 1 200 44 242 9.44e-34 129
Msa0724450 AT5G46510.2 41.566 166 92 3 14 178 9 170 1.19e-33 128
Msa0724450 AT5G46510.1 41.566 166 92 3 14 178 9 170 1.30e-33 128
Msa0724450 AT3G04210.2 32.843 204 131 4 10 211 62 261 2.14e-33 126
Msa0724450 AT3G04210.1 32.843 204 131 4 10 211 62 261 2.14e-33 126
Msa0724450 AT5G46490.3 36.898 187 111 3 14 199 69 249 2.78e-33 127
Msa0724450 AT5G46490.7 36.898 187 111 3 14 199 52 232 2.85e-33 126
Msa0724450 AT5G46490.5 36.898 187 111 3 14 199 52 232 2.85e-33 126
Msa0724450 AT1G72840.2 39.037 187 112 2 14 199 15 200 3.02e-33 127
Msa0724450 AT1G72840.3 39.037 187 112 2 14 199 15 200 3.02e-33 127
Msa0724450 AT1G72840.1 39.037 187 112 2 14 199 15 200 3.28e-33 127
Msa0724450 AT5G46490.4 36.898 187 111 3 14 199 69 249 3.48e-33 127
Msa0724450 AT5G46490.6 36.898 187 111 3 14 199 52 232 3.70e-33 126
Msa0724450 AT5G46520.2 39.759 166 93 3 14 178 50 209 4.80e-33 127
Msa0724450 AT1G57670.1 33.005 203 128 3 14 211 9 208 8.09e-33 123
Msa0724450 AT1G17600.1 44.767 172 89 4 5 174 2 169 1.26e-32 125
Msa0724450 AT4G14370.1 37.580 157 96 1 45 201 2 156 1.78e-32 125
Msa0724450 AT5G38344.1 36.806 144 89 1 11 154 57 198 2.46e-32 117
Msa0724450 AT5G48770.1 44.643 168 84 3 14 178 14 175 3.46e-32 124
Msa0724450 AT2G32140.1 37.288 177 102 4 8 181 19 189 2.48e-31 118
Msa0724450 AT5G41740.1 36.410 195 97 5 12 200 14 187 5.24e-31 120
Msa0724450 AT4G09430.1 36.869 198 119 3 4 200 5 197 6.22e-31 120
Msa0724450 AT5G41740.2 36.410 195 97 5 12 200 14 187 6.61e-31 120
Msa0724450 AT5G40100.1 42.945 163 87 4 14 174 12 170 7.01e-31 120
Msa0724450 AT1G47370.1 35.838 173 104 3 6 174 2 171 9.14e-31 117
Msa0724450 AT5G48780.1 40.588 170 86 4 12 174 10 171 1.40e-30 119
Msa0724450 AT5G48780.2 40.588 170 86 4 12 174 10 171 1.55e-30 119
Msa0724450 AT1G63740.1 40.123 162 83 4 45 200 2 155 1.65e-30 119
Msa0724450 AT4G36150.1 34.973 183 115 3 9 191 15 193 2.21e-30 119
Msa0724450 AT1G27170.2 37.349 166 100 3 15 179 17 179 2.91e-30 119
Msa0724450 AT2G03300.1 36.250 160 99 2 15 174 8 164 4.33e-30 111
Msa0724450 AT4G19530.1 35.533 197 112 7 10 198 12 201 7.90e-30 117
Msa0724450 AT4G19530.2 35.533 197 112 7 10 198 12 201 8.56e-30 117
Msa0724450 AT5G45070.1 33.889 180 116 2 1 178 1 179 1.42e-29 114
Msa0724450 AT4G19520.2 39.106 179 96 7 4 178 1390 1559 1.48e-29 117
Msa0724450 AT4G19520.2 34.737 190 106 5 15 201 6 180 1.52e-24 102
Msa0724450 AT4G19520.4 39.106 179 96 7 4 178 1390 1559 1.48e-29 117
Msa0724450 AT4G19520.4 34.737 190 106 5 15 201 6 180 1.52e-24 102
Msa0724450 AT4G19520.1 39.106 179 96 7 4 178 1390 1559 1.66e-29 116
Msa0724450 AT4G19520.1 34.737 190 106 5 15 201 6 180 1.53e-24 102
Msa0724450 AT5G45060.2 36.471 170 104 2 1 170 1 166 1.72e-29 116
Msa0724450 AT5G45060.1 36.471 170 104 2 1 170 1 166 1.72e-29 116
Msa0724450 AT1G27180.5 35.227 176 101 4 13 186 11 175 4.30e-29 115
Msa0724450 AT1G27180.8 35.227 176 101 4 13 186 11 175 4.30e-29 115
Msa0724450 AT1G27180.1 35.227 176 101 4 13 186 175 339 4.85e-29 115
Msa0724450 AT1G27180.1 36.424 151 83 5 13 158 16 158 2.82e-21 92.8
Msa0724450 AT1G57850.1 35.185 162 100 4 14 174 12 169 6.17e-29 108
Msa0724450 AT2G03030.1 36.250 160 99 2 15 174 8 164 3.66e-28 106
Msa0724450 AT5G44900.1 31.579 190 126 3 3 192 8 193 5.13e-28 107
Msa0724450 AT5G11250.3 33.333 171 109 3 39 207 5 172 9.12e-28 111
Msa0724450 AT5G11250.1 33.333 171 109 3 39 207 5 172 9.12e-28 111
Msa0724450 AT4G04110.1 34.104 173 109 3 16 187 45 213 1.06e-27 106
Msa0724450 AT5G45220.2 36.000 175 101 5 13 181 330 499 1.24e-27 110
Msa0724450 AT5G45220.2 28.000 175 118 3 4 178 6 172 7.63e-18 82.4
Msa0724450 AT1G57630.1 39.597 149 81 5 14 158 22 165 1.29e-27 104
Msa0724450 AT5G44870.1 34.637 179 111 4 4 181 2 175 1.51e-27 111
Msa0724450 AT5G45250.1 38.012 171 100 4 4 174 7 171 1.83e-27 110
Msa0724450 AT1G57850.3 35.669 157 87 5 14 169 12 155 4.16e-27 102
Msa0724450 AT5G45000.1 35.503 169 107 2 6 174 8 174 4.21e-27 108
Msa0724450 AT5G45000.1 26.946 167 120 1 10 174 211 377 3.49e-14 71.6
Msa0724450 AT4G19920.1 30.814 172 117 2 11 181 47 217 6.44e-27 105
Msa0724450 AT4G19520.3 40.000 160 84 6 4 160 1390 1540 2.62e-26 107
Msa0724450 AT4G19520.3 34.737 190 106 5 15 201 6 180 1.79e-24 102
Msa0724450 AT4G19520.5 40.000 160 84 6 4 160 1390 1540 2.65e-26 107
Msa0724450 AT4G19520.5 34.737 190 106 5 15 201 6 180 1.80e-24 102
Msa0724450 AT1G57830.1 35.762 151 94 2 11 161 18 165 3.76e-26 100
Msa0724450 AT1G72870.1 37.791 172 99 4 13 182 9 174 4.36e-26 106
Msa0724450 AT5G45220.1 38.519 135 80 3 13 146 330 462 9.55e-26 105
Msa0724450 AT5G45220.1 28.000 175 118 3 4 178 6 172 8.31e-18 82.4
Msa0724450 AT3G51570.2 32.759 174 112 3 10 183 16 184 1.15e-25 105
Msa0724450 AT3G51570.1 32.759 174 112 3 10 183 16 184 1.17e-25 105
Msa0724450 AT4G16940.6 40.741 135 76 2 46 178 1 133 3.10e-25 104
Msa0724450 AT4G16940.2 40.741 135 76 2 46 178 1 133 3.11e-25 104
Msa0724450 AT4G16940.3 40.741 135 76 2 46 178 1 133 3.11e-25 104
Msa0724450 AT4G16940.5 40.741 135 76 2 46 178 1 133 3.11e-25 104
Msa0724450 AT1G60320.1 35.714 154 96 2 1 154 11 161 3.25e-25 98.2
Msa0724450 AT4G16940.1 40.741 135 76 2 46 178 1 133 4.20e-25 103
Msa0724450 AT4G16940.4 40.741 135 76 2 46 178 1 133 4.21e-25 103
Msa0724450 AT5G45200.3 32.632 190 111 4 1 181 1 182 5.20e-25 103
Msa0724450 AT5G45200.1 32.632 190 111 4 1 181 1 182 8.33e-25 103
Msa0724450 AT5G17880.1 35.196 179 105 4 5 180 10 180 1.40e-24 102
Msa0724450 AT5G17880.2 35.196 179 105 4 5 180 10 180 1.42e-24 102
Msa0724450 AT5G44920.1 31.818 176 108 3 15 179 12 186 1.43e-24 98.6
Msa0724450 AT1G65390.2 35.616 146 89 2 7 152 19 159 6.76e-24 96.7
Msa0724450 AT5G51630.2 48.649 111 53 2 69 178 2 109 7.53e-24 100
Msa0724450 AT5G51630.5 48.649 111 53 2 69 178 2 109 7.54e-24 100
Msa0724450 AT5G51630.4 48.649 111 53 2 69 178 2 109 8.51e-24 100
Msa0724450 AT5G51630.6 48.649 111 53 2 69 178 2 109 8.51e-24 100
Msa0724450 AT1G65390.3 35.616 146 89 2 7 152 19 159 1.07e-23 97.1
Msa0724450 AT1G65390.1 35.616 146 89 2 7 152 19 159 4.93e-23 97.1
Msa0724450 AT5G45210.3 34.184 196 113 6 7 200 28 209 6.60e-23 97.4
Msa0724450 AT5G45210.2 34.184 196 113 6 7 200 28 209 7.59e-23 97.4
Msa0724450 AT5G45210.5 34.184 196 113 6 7 200 19 200 7.85e-23 97.4
Msa0724450 AT5G45210.4 34.184 196 113 6 7 200 28 209 8.42e-23 97.1
Msa0724450 AT5G45210.1 35.106 188 106 6 15 200 8 181 1.10e-22 97.1
Msa0724450 AT1G09665.1 33.113 151 90 5 8 154 4 147 1.91e-22 90.5
Msa0724450 AT2G17060.2 28.962 183 127 2 7 189 11 190 2.22e-22 96.3
Msa0724450 AT5G45080.1 39.456 147 87 2 1 146 1 146 2.70e-22 94.7
Msa0724450 AT1G51270.13 31.034 174 117 2 8 181 183 353 2.84e-22 94.4
Msa0724450 AT1G51270.12 31.034 174 117 2 8 181 183 353 2.84e-22 94.4
Msa0724450 AT1G51270.14 31.034 174 117 2 8 181 183 353 2.84e-22 94.4
Msa0724450 AT1G51270.11 31.034 174 117 2 8 181 183 353 2.84e-22 94.4
Msa0724450 AT2G17060.1 28.962 183 127 2 7 189 11 190 2.88e-22 95.9
Msa0724450 AT1G51270.5 31.034 174 117 2 8 181 184 354 3.21e-22 94.0
Msa0724450 AT1G51270.4 31.034 174 117 2 8 181 114 284 3.48e-22 94.4
Msa0724450 AT1G51270.15 31.034 174 117 2 8 181 183 353 5.22e-22 94.4
Msa0724450 AT1G27180.2 34.637 179 95 6 13 186 16 177 8.00e-22 94.4
Msa0724450 AT1G27180.3 33.690 187 102 6 5 186 8 177 9.30e-22 94.4
Msa0724450 AT1G51270.9 31.034 174 117 2 8 181 306 476 1.02e-21 94.0
Msa0724450 AT1G51270.6 31.034 174 117 2 8 181 306 476 1.02e-21 94.0
Msa0724450 AT1G51270.7 31.034 174 117 2 8 181 306 476 1.02e-21 94.0
Msa0724450 AT1G51270.10 31.034 174 117 2 8 181 306 476 1.02e-21 94.0
Msa0724450 AT1G51270.3 31.034 174 117 2 8 181 354 524 1.05e-21 94.0
Msa0724450 AT4G23510.2 32.738 168 95 4 1 155 1 163 1.18e-21 93.6
Msa0724450 AT4G23510.1 32.738 168 95 4 1 155 1 163 1.27e-21 93.6
Msa0724450 AT4G23510.3 32.738 168 95 4 1 155 1 163 1.27e-21 93.6
Msa0724450 AT1G51270.8 31.034 174 117 2 8 181 354 524 1.34e-21 93.6
Msa0724450 AT1G51270.2 31.034 174 117 2 8 181 354 524 1.34e-21 93.6
Msa0724450 AT4G36140.1 30.144 209 104 1 13 179 49 257 1.36e-21 94.0
Msa0724450 AT4G36140.1 36.943 157 75 3 23 178 443 576 3.24e-21 92.8
Msa0724450 AT4G36140.2 36.943 157 75 3 23 178 258 391 2.66e-21 93.2
Msa0724450 AT4G11340.1 32.086 187 112 3 9 181 220 405 2.83e-21 92.4
Msa0724450 AT4G23515.1 30.000 180 107 5 13 178 8 182 4.21e-21 90.5
Msa0724450 AT4G23515.2 30.000 180 107 5 13 178 8 182 4.27e-21 89.7
Msa0724450 AT1G51270.1 34.532 139 88 2 8 146 354 489 3.34e-20 89.4
Msa0724450 AT5G44920.2 29.310 174 102 3 15 179 12 173 2.17e-19 84.3
Msa0724450 AT5G45230.1 30.270 185 118 4 6 181 3 185 3.50e-19 86.7
Msa0724450 AT3G51560.1 31.915 188 103 5 15 200 6 170 5.33e-19 86.3
Msa0724450 AT1G72850.1 33.929 168 98 3 13 180 6 160 3.93e-18 83.2
Msa0724450 AT1G52900.1 29.940 167 101 4 10 175 34 185 1.03e-16 76.3
Msa0724450 AT5G44910.1 29.861 144 100 1 11 154 8 150 1.08e-15 74.3
Msa0724450 AT1G57850.2 33.613 119 65 5 52 169 37 142 1.31e-15 72.0
Msa0724450 AT2G17050.1 33.333 183 112 8 2 179 1112 1289 2.07e-15 75.9
Msa0724450 AT2G17050.2 33.333 183 112 8 2 179 1143 1320 2.41e-15 75.5
Msa0724450 AT2G17050.3 35.443 158 92 8 2 154 1143 1295 4.89e-14 71.6
Msa0724450 AT4G09420.1 28.936 235 149 7 9 237 9 231 6.80e-13 67.8
Msa0724450 AT5G45240.2 37.273 110 64 3 71 179 46 151 2.61e-12 66.6
Msa0724450 AT5G45240.1 37.273 110 64 3 71 179 46 151 2.79e-12 66.2
Msa0724450 AT4G19925.1 29.143 175 109 6 15 178 13 183 5.87e-12 63.9
Msa0724450 AT1G65850.3 37.500 88 53 2 92 179 1 86 1.74e-11 63.9
Msa0724450 AT2G14080.2 33.621 116 62 5 92 200 1 108 3.25e-11 63.2
Msa0724450 AT1G61105.1 32.673 101 63 2 15 114 30 126 4.64e-11 60.5

Find 50 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGAAGCTGCCAATCTTTC+TGG 0.146850 5_1:-22962413 Msa0724450:CDS
GGAACGATTTCATGGGAATT+TGG 0.245217 5_1:-22962465 Msa0724450:CDS
AGATATCGTCCGCGCTTCTT+AGG 0.316453 5_1:-22962688 Msa0724450:CDS
GAAGTGTTCCTCAGCTTTAG+AGG 0.328100 5_1:-22962809 Msa0724450:CDS
TGGAAATTCTAAGTGGTGTT+TGG 0.365592 5_1:-22962618 Msa0724450:CDS
GAAAATTGCAAAGGATGTAT+TGG 0.377192 5_1:-22962247 Msa0724450:CDS
GCTGGGATTGCTCTACAAAT+AGG 0.380832 5_1:-22962391 Msa0724450:intron
TACTAGAATGTAAGAAGATC+AGG 0.381991 5_1:-22962580 Msa0724450:CDS
GCAATCCCAGCCAGAAAGAT+TGG 0.396222 5_1:+22962403 None:intergenic
AAACATGAGGAACGATTTCA+TGG 0.405953 5_1:-22962473 Msa0724450:CDS
ATTTGGAGAGGGTGCAAAAG+TGG 0.408492 5_1:-22962448 Msa0724450:CDS
CATCCGCATAACTTCCCGTT+TGG 0.409662 5_1:+22962504 None:intergenic
AGCTGCCAATCTTTCTGGCT+GGG 0.414675 5_1:-22962408 Msa0724450:CDS
CCCAACATTTAAAGCATGTC+AGG 0.419055 5_1:+22962036 None:intergenic
CGCGCTTCTTAGGGCCATTG+AGG 0.471281 5_1:-22962678 Msa0724450:CDS
GTCTGATGTTCGCAACCAAA+CGG 0.472286 5_1:-22962519 Msa0724450:CDS
TCAGAAAATTGCAAAGTATG+AGG 0.482631 5_1:-22962190 Msa0724450:CDS
GATATCGTCCGCGCTTCTTA+GGG 0.484452 5_1:-22962687 Msa0724450:CDS
AAGCTGCCAATCTTTCTGGC+TGG 0.486411 5_1:-22962409 Msa0724450:CDS
CGCAACTGCTCGACGTGTCA+CGG 0.509236 5_1:-22962100 Msa0724450:CDS
TCTGATGTTCGCAACCAAAC+GGG 0.509737 5_1:-22962518 Msa0724450:CDS
ATATGTTCCGACTTCAAGTC+GGG 0.513020 5_1:+22962739 None:intergenic
AAACTAAATCGAGTATATGT+TGG 0.519977 5_1:-22962222 Msa0724450:CDS
TGGAGAGGGTGCAAAAGTGG+AGG 0.522310 5_1:-22962445 Msa0724450:CDS
GGAGAGGGTGCAAAAGTGGA+GGG 0.524370 5_1:-22962444 Msa0724450:CDS
GGAAAGGCTTGCCTCCTCAA+TGG 0.532878 5_1:+22962664 None:intergenic
GCTTCTTAGGGCCATTGAGG+AGG 0.559272 5_1:-22962675 Msa0724450:CDS
GTTATGCTTGTTCAAATCAA+CGG 0.564491 5_1:+22962122 None:intergenic
ACTAGAATGTAAGAAGATCA+GGG 0.569618 5_1:-22962579 Msa0724450:CDS
TCTCGTCGCCTCTTTGAAGA+TGG 0.571958 5_1:+22962708 None:intergenic
ATTTCATGGGAATTTGGAGA+GGG 0.590338 5_1:-22962459 Msa0724450:CDS
CAACCAAACGGGAAGTTATG+CGG 0.605373 5_1:-22962507 Msa0724450:CDS
GATTTCATGGGAATTTGGAG+AGG 0.607848 5_1:-22962460 Msa0724450:CDS
GTTCCTCAGCTTTAGAGGCG+AGG 0.610241 5_1:-22962804 Msa0724450:CDS
GCTAGCCAATAAACATGGCA+TGG 0.611629 5_1:-22962865 None:intergenic
AAAACTATGGAAATTCTAAG+TGG 0.611861 5_1:-22962625 Msa0724450:CDS
TATATGTTCCGACTTCAAGT+CGG 0.614569 5_1:+22962738 None:intergenic
GTTTGGTTGCGAACATCAGA+CGG 0.616452 5_1:+22962521 None:intergenic
ACTTTGACCCGACTTGAAGT+CGG 0.618380 5_1:-22962746 Msa0724450:CDS
GACTTCAAGTCGGGTCAAAG+TGG 0.633546 5_1:+22962748 None:intergenic
CTCAATGGCCCTAAGAAGCG+CGG 0.634760 5_1:+22962679 None:intergenic
ACTGCTTGAGAAAATTGCAA+AGG 0.650848 5_1:-22962256 Msa0724450:CDS
TGTCCTCGCCTCTAAAGCTG+AGG 0.651214 5_1:+22962801 None:intergenic
ATAGACTACCATCTTCAAAG+AGG 0.655875 5_1:-22962716 Msa0724450:CDS
CTAGAATGTAAGAAGATCAG+GGG 0.662239 5_1:-22962578 Msa0724450:CDS
AACATGAGGAACGATTTCAT+GGG 0.665847 5_1:-22962472 Msa0724450:CDS
GAGGGTGCAAAAGTGGAGGG+AGG 0.669477 5_1:-22962441 Msa0724450:CDS
GGATGCATTCGTTAAACATG+AGG 0.670920 5_1:-22962486 Msa0724450:CDS
GGCATGAAGATGACTAGTGA+AGG 0.682070 5_1:+22962769 None:intergenic
TAGAATGTAAGAAGATCAGG+GGG 0.688618 5_1:-22962577 Msa0724450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GGTTCTATATCATAAAAAAT+TGG + chr5_1:22962356-22962375 None:intergenic 20.0%
!! GGTTCTATATCATAAAAAAT+TGG + chr5_1:22962356-22962375 None:intergenic 20.0%
!!! GTTTTTGGAAAAAACAACAA+CGG + chr5_1:22962255-22962274 None:intergenic 25.0%
!!! GTTGTTTTTTCCAAAAACTA+TGG - chr5_1:22962257-22962276 Msa0724450:CDS 25.0%
!! CTTAGAATTTCCATAGTTTT+TGG + chr5_1:22962270-22962289 None:intergenic 25.0%
! AAAACTATGGAAATTCTAAG+TGG - chr5_1:22962270-22962289 Msa0724450:CDS 25.0%
! ACAAATAGGTAAATATCTCT+AGG - chr5_1:22962518-22962537 Msa0724450:CDS 25.0%
!! AACCATGATGATTAATTTTC+AGG - chr5_1:22962605-22962624 Msa0724450:CDS 25.0%
! ATCCTGAAAATTAATCATCA+TGG + chr5_1:22962610-22962629 None:intergenic 25.0%
!!! ATGATGATTAATTTTCAGGA+TGG - chr5_1:22962609-22962628 Msa0724450:CDS 25.0%
! AAACTAAATCGAGTATATGT+TGG - chr5_1:22962673-22962692 Msa0724450:CDS 25.0%
!!! GTTTTTGGAAAAAACAACAA+CGG + chr5_1:22962255-22962274 None:intergenic 25.0%
!!! GTTGTTTTTTCCAAAAACTA+TGG - chr5_1:22962257-22962276 Msa0724450:CDS 25.0%
!! CTTAGAATTTCCATAGTTTT+TGG + chr5_1:22962270-22962289 None:intergenic 25.0%
! AAAACTATGGAAATTCTAAG+TGG - chr5_1:22962270-22962289 Msa0724450:CDS 25.0%
! ACAAATAGGTAAATATCTCT+AGG - chr5_1:22962518-22962537 Msa0724450:CDS 25.0%
!! AACCATGATGATTAATTTTC+AGG - chr5_1:22962605-22962624 Msa0724450:CDS 25.0%
! ATCCTGAAAATTAATCATCA+TGG + chr5_1:22962610-22962629 None:intergenic 25.0%
!!! ATGATGATTAATTTTCAGGA+TGG - chr5_1:22962609-22962628 Msa0724450:CDS 25.0%
! AAACTAAATCGAGTATATGT+TGG - chr5_1:22962673-22962692 Msa0724450:CDS 25.0%
TACTAGAATGTAAGAAGATC+AGG - chr5_1:22962315-22962334 Msa0724450:intron 30.0%
ACTAGAATGTAAGAAGATCA+GGG - chr5_1:22962316-22962335 Msa0724450:intron 30.0%
GAAAATTGCAAAGGATGTAT+TGG - chr5_1:22962648-22962667 Msa0724450:CDS 30.0%
! ACTTTGCAATTTTCTGATCT+AGG + chr5_1:22962702-22962721 None:intergenic 30.0%
TCAGAAAATTGCAAAGTATG+AGG - chr5_1:22962705-22962724 Msa0724450:CDS 30.0%
GTTATGCTTGTTCAAATCAA+CGG + chr5_1:22962776-22962795 None:intergenic 30.0%
TACTAGAATGTAAGAAGATC+AGG - chr5_1:22962315-22962334 Msa0724450:intron 30.0%
ACTAGAATGTAAGAAGATCA+GGG - chr5_1:22962316-22962335 Msa0724450:intron 30.0%
GAAAATTGCAAAGGATGTAT+TGG - chr5_1:22962648-22962667 Msa0724450:CDS 30.0%
! ACTTTGCAATTTTCTGATCT+AGG + chr5_1:22962702-22962721 None:intergenic 30.0%
TCAGAAAATTGCAAAGTATG+AGG - chr5_1:22962705-22962724 Msa0724450:CDS 30.0%
GTTATGCTTGTTCAAATCAA+CGG + chr5_1:22962776-22962795 None:intergenic 30.0%
! ACACTTCATGCTTTTGTTGA+GGG + chr5_1:22962073-22962092 None:intergenic 35.0%
! AACACTTCATGCTTTTGTTG+AGG + chr5_1:22962074-22962093 None:intergenic 35.0%
TATATGTTCCGACTTCAAGT+CGG + chr5_1:22962160-22962179 None:intergenic 35.0%
ATAGACTACCATCTTCAAAG+AGG - chr5_1:22962179-22962198 Msa0724450:CDS 35.0%
TGGAAAAAACAACAACGGAA+AGG + chr5_1:22962250-22962269 None:intergenic 35.0%
TGGAAATTCTAAGTGGTGTT+TGG - chr5_1:22962277-22962296 Msa0724450:intron 35.0%
CTAGAATGTAAGAAGATCAG+GGG - chr5_1:22962317-22962336 Msa0724450:intron 35.0%
TAGAATGTAAGAAGATCAGG+GGG - chr5_1:22962318-22962337 Msa0724450:intron 35.0%
AAACATGAGGAACGATTTCA+TGG - chr5_1:22962422-22962441 Msa0724450:CDS 35.0%
AACATGAGGAACGATTTCAT+GGG - chr5_1:22962423-22962442 Msa0724450:CDS 35.0%
ATTTCATGGGAATTTGGAGA+GGG - chr5_1:22962436-22962455 Msa0724450:CDS 35.0%
ACTGCTTGAGAAAATTGCAA+AGG - chr5_1:22962639-22962658 Msa0724450:CDS 35.0%
! ACACTTCATGCTTTTGTTGA+GGG + chr5_1:22962073-22962092 None:intergenic 35.0%
! AACACTTCATGCTTTTGTTG+AGG + chr5_1:22962074-22962093 None:intergenic 35.0%
TATATGTTCCGACTTCAAGT+CGG + chr5_1:22962160-22962179 None:intergenic 35.0%
ATAGACTACCATCTTCAAAG+AGG - chr5_1:22962179-22962198 Msa0724450:CDS 35.0%
TGGAAAAAACAACAACGGAA+AGG + chr5_1:22962250-22962269 None:intergenic 35.0%
TGGAAATTCTAAGTGGTGTT+TGG - chr5_1:22962277-22962296 Msa0724450:intron 35.0%
CTAGAATGTAAGAAGATCAG+GGG - chr5_1:22962317-22962336 Msa0724450:intron 35.0%
TAGAATGTAAGAAGATCAGG+GGG - chr5_1:22962318-22962337 Msa0724450:intron 35.0%
AAACATGAGGAACGATTTCA+TGG - chr5_1:22962422-22962441 Msa0724450:CDS 35.0%
AACATGAGGAACGATTTCAT+GGG - chr5_1:22962423-22962442 Msa0724450:CDS 35.0%
ATTTCATGGGAATTTGGAGA+GGG - chr5_1:22962436-22962455 Msa0724450:CDS 35.0%
ACTGCTTGAGAAAATTGCAA+AGG - chr5_1:22962639-22962658 Msa0724450:CDS 35.0%
! CACTTCATGCTTTTGTTGAG+GGG + chr5_1:22962072-22962091 None:intergenic 40.0%
ATATGTTCCGACTTCAAGTC+GGG + chr5_1:22962159-22962178 None:intergenic 40.0%
GGATGCATTCGTTAAACATG+AGG - chr5_1:22962409-22962428 Msa0724450:CDS 40.0%
GGAACGATTTCATGGGAATT+TGG - chr5_1:22962430-22962449 Msa0724450:CDS 40.0%
GATTTCATGGGAATTTGGAG+AGG - chr5_1:22962435-22962454 Msa0724450:CDS 40.0%
ACGTGTCACGGAACTAAAAA+TGG - chr5_1:22962807-22962826 Msa0724450:CDS 40.0%
! CACTTCATGCTTTTGTTGAG+GGG + chr5_1:22962072-22962091 None:intergenic 40.0%
ATATGTTCCGACTTCAAGTC+GGG + chr5_1:22962159-22962178 None:intergenic 40.0%
GGATGCATTCGTTAAACATG+AGG - chr5_1:22962409-22962428 Msa0724450:CDS 40.0%
GGAACGATTTCATGGGAATT+TGG - chr5_1:22962430-22962449 Msa0724450:CDS 40.0%
GATTTCATGGGAATTTGGAG+AGG - chr5_1:22962435-22962454 Msa0724450:CDS 40.0%
ACGTGTCACGGAACTAAAAA+TGG - chr5_1:22962807-22962826 Msa0724450:CDS 40.0%
! ATGCTTTTGTTGAGGGGTAG+TGG + chr5_1:22962066-22962085 None:intergenic 45.0%
! GAAGTGTTCCTCAGCTTTAG+AGG - chr5_1:22962086-22962105 Msa0724450:CDS 45.0%
GGCATGAAGATGACTAGTGA+AGG + chr5_1:22962129-22962148 None:intergenic 45.0%
! ACTTTGACCCGACTTGAAGT+CGG - chr5_1:22962149-22962168 Msa0724450:CDS 45.0%
GTTTGGTTGCGAACATCAGA+CGG + chr5_1:22962377-22962396 None:intergenic 45.0%
GTCTGATGTTCGCAACCAAA+CGG - chr5_1:22962376-22962395 Msa0724450:intron 45.0%
TCTGATGTTCGCAACCAAAC+GGG - chr5_1:22962377-22962396 Msa0724450:intron 45.0%
CAACCAAACGGGAAGTTATG+CGG - chr5_1:22962388-22962407 Msa0724450:intron 45.0%
! ATTTGGAGAGGGTGCAAAAG+TGG - chr5_1:22962447-22962466 Msa0724450:CDS 45.0%
AGAGAAGCTGCCAATCTTTC+TGG - chr5_1:22962482-22962501 Msa0724450:CDS 45.0%
GCTGGGATTGCTCTACAAAT+AGG - chr5_1:22962504-22962523 Msa0724450:CDS 45.0%
! ATGCTTTTGTTGAGGGGTAG+TGG + chr5_1:22962066-22962085 None:intergenic 45.0%
! GAAGTGTTCCTCAGCTTTAG+AGG - chr5_1:22962086-22962105 Msa0724450:CDS 45.0%
GGCATGAAGATGACTAGTGA+AGG + chr5_1:22962129-22962148 None:intergenic 45.0%
! ACTTTGACCCGACTTGAAGT+CGG - chr5_1:22962149-22962168 Msa0724450:CDS 45.0%
GTTTGGTTGCGAACATCAGA+CGG + chr5_1:22962377-22962396 None:intergenic 45.0%
GTCTGATGTTCGCAACCAAA+CGG - chr5_1:22962376-22962395 Msa0724450:intron 45.0%
TCTGATGTTCGCAACCAAAC+GGG - chr5_1:22962377-22962396 Msa0724450:intron 45.0%
CAACCAAACGGGAAGTTATG+CGG - chr5_1:22962388-22962407 Msa0724450:intron 45.0%
! ATTTGGAGAGGGTGCAAAAG+TGG - chr5_1:22962447-22962466 Msa0724450:CDS 45.0%
AGAGAAGCTGCCAATCTTTC+TGG - chr5_1:22962482-22962501 Msa0724450:CDS 45.0%
GCTGGGATTGCTCTACAAAT+AGG - chr5_1:22962504-22962523 Msa0724450:CDS 45.0%
GACTTCAAGTCGGGTCAAAG+TGG + chr5_1:22962150-22962169 None:intergenic 50.0%
! TCTCGTCGCCTCTTTGAAGA+TGG + chr5_1:22962190-22962209 None:intergenic 50.0%
AGATATCGTCCGCGCTTCTT+AGG - chr5_1:22962207-22962226 Msa0724450:CDS 50.0%
GATATCGTCCGCGCTTCTTA+GGG - chr5_1:22962208-22962227 Msa0724450:CDS 50.0%
CATCCGCATAACTTCCCGTT+TGG + chr5_1:22962394-22962413 None:intergenic 50.0%
! AAGCTGCCAATCTTTCTGGC+TGG - chr5_1:22962486-22962505 Msa0724450:CDS 50.0%
!! AGCTGCCAATCTTTCTGGCT+GGG - chr5_1:22962487-22962506 Msa0724450:CDS 50.0%
GCAATCCCAGCCAGAAAGAT+TGG + chr5_1:22962495-22962514 None:intergenic 50.0%
GACTTCAAGTCGGGTCAAAG+TGG + chr5_1:22962150-22962169 None:intergenic 50.0%
! TCTCGTCGCCTCTTTGAAGA+TGG + chr5_1:22962190-22962209 None:intergenic 50.0%
AGATATCGTCCGCGCTTCTT+AGG - chr5_1:22962207-22962226 Msa0724450:CDS 50.0%
GATATCGTCCGCGCTTCTTA+GGG - chr5_1:22962208-22962227 Msa0724450:CDS 50.0%
CATCCGCATAACTTCCCGTT+TGG + chr5_1:22962394-22962413 None:intergenic 50.0%
! AAGCTGCCAATCTTTCTGGC+TGG - chr5_1:22962486-22962505 Msa0724450:CDS 50.0%
!! AGCTGCCAATCTTTCTGGCT+GGG - chr5_1:22962487-22962506 Msa0724450:CDS 50.0%
GCAATCCCAGCCAGAAAGAT+TGG + chr5_1:22962495-22962514 None:intergenic 50.0%
!! GTTCCTCAGCTTTAGAGGCG+AGG - chr5_1:22962091-22962110 Msa0724450:CDS 55.0%
!! TGTCCTCGCCTCTAAAGCTG+AGG + chr5_1:22962097-22962116 None:intergenic 55.0%
CTCAATGGCCCTAAGAAGCG+CGG + chr5_1:22962219-22962238 None:intergenic 55.0%
GCTTCTTAGGGCCATTGAGG+AGG - chr5_1:22962220-22962239 Msa0724450:CDS 55.0%
GGAAAGGCTTGCCTCCTCAA+TGG + chr5_1:22962234-22962253 None:intergenic 55.0%
! TGGAGAGGGTGCAAAAGTGG+AGG - chr5_1:22962450-22962469 Msa0724450:CDS 55.0%
! GGAGAGGGTGCAAAAGTGGA+GGG - chr5_1:22962451-22962470 Msa0724450:CDS 55.0%
!! GTTCCTCAGCTTTAGAGGCG+AGG - chr5_1:22962091-22962110 Msa0724450:CDS 55.0%
!! TGTCCTCGCCTCTAAAGCTG+AGG + chr5_1:22962097-22962116 None:intergenic 55.0%
CTCAATGGCCCTAAGAAGCG+CGG + chr5_1:22962219-22962238 None:intergenic 55.0%
GCTTCTTAGGGCCATTGAGG+AGG - chr5_1:22962220-22962239 Msa0724450:CDS 55.0%
GGAAAGGCTTGCCTCCTCAA+TGG + chr5_1:22962234-22962253 None:intergenic 55.0%
! TGGAGAGGGTGCAAAAGTGG+AGG - chr5_1:22962450-22962469 Msa0724450:CDS 55.0%
! GGAGAGGGTGCAAAAGTGGA+GGG - chr5_1:22962451-22962470 Msa0724450:CDS 55.0%
CGCGCTTCTTAGGGCCATTG+AGG - chr5_1:22962217-22962236 Msa0724450:CDS 60.0%
! GAGGGTGCAAAAGTGGAGGG+AGG - chr5_1:22962454-22962473 Msa0724450:CDS 60.0%
CGCAACTGCTCGACGTGTCA+CGG - chr5_1:22962795-22962814 Msa0724450:CDS 60.0%
CGCGCTTCTTAGGGCCATTG+AGG - chr5_1:22962217-22962236 Msa0724450:CDS 60.0%
! GAGGGTGCAAAAGTGGAGGG+AGG - chr5_1:22962454-22962473 Msa0724450:CDS 60.0%
CGCAACTGCTCGACGTGTCA+CGG - chr5_1:22962795-22962814 Msa0724450:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 22962044 22962873 22962044 ID=Msa0724450;Name=Msa0724450
chr5_1 mRNA 22962044 22962873 22962044 ID=Msa0724450-mRNA-1;Parent=Msa0724450;Name=Msa0724450-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|2|0|242
chr5_1 exon 22962392 22962873 22962392 ID=Msa0724450-mRNA-1:exon:8636;Parent=Msa0724450-mRNA-1
chr5_1 exon 22962044 22962290 22962044 ID=Msa0724450-mRNA-1:exon:8635;Parent=Msa0724450-mRNA-1
chr5_1 CDS 22962392 22962873 22962392 ID=Msa0724450-mRNA-1:cds;Parent=Msa0724450-mRNA-1
chr5_1 CDS 22962044 22962290 22962044 ID=Msa0724450-mRNA-1:cds;Parent=Msa0724450-mRNA-1
Gene Sequence

>Msa0724450

ATGGCATGGTCAACTTCTTCCACTACCCCTCAACAAAAGCATGAAGTGTTCCTCAGCTTTAGAGGCGAGGACACACGCTACACCTTCACTAGTCATCTTCATGCCACTTTGACCCGACTTGAAGTCGGAACATATATAGACTACCATCTTCAAAGAGGCGACGAGATATCGTCCGCGCTTCTTAGGGCCATTGAGGAGGCAAGCCTTTCCGTTGTTGTTTTTTCCAAAAACTATGGAAATTCTAAGTGGTGTTTGGACGAGCTTGTGAAAATACTAGAATGTAAGAAGATCAGGGGGCAAATTGTTTTGCCAATTTTTTATGATATAGAACCGTCTGATGTTCGCAACCAAACGGGAAGTTATGCGGATGCATTCGTTAAACATGAGGAACGATTTCATGGGAATTTGGAGAGGGTGCAAAAGTGGAGGGAGGCTTTGAGAGAAGCTGCCAATCTTTCTGGCTGGGATTGCTCTACAAATAGGATGGAATCTGAACTGCTTGAGAAAATTGCAAAGGATGTATTGGAAAAACTAAATCGAGTATATGTTGGTGACCTAGATCAGAAAATTGCAAAGTATGAGGAACTTGCAAAGCTACAATATCAATTCTTTGTAAGCACACTGAACACCGTTGATTTGAACAAGCATAACGCAACTGCTCGACGTGTCACGGAACTAAAAATGGAGAGAAGTCTTCGTTTGCTTCGCGTGACTCCTGACATGCTTTAA
Protein sequence

>Msa0724450

MAWSTSSTTPQQKHEVFLSFRGEDTRYTFTSHLHATLTRLEVGTYIDYHLQRGDEISSALLRAIEEASLSVVVFSKNYGNSKWCLDELVKILECKKIRGQIVLPIFYDIEPSDVRNQTGSYADAFVKHEERFHGNLERVQKWREALREAANLSGWDCSTNRMESELLEKIAKDVLEKLNRVYVGDLDQKIAKYEELAKLQYQFFVSTLNTVDLNKHNATARRVTELKMERSLRLLRVTPDML*