Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0751630 | sp|Q9S7X6|ACL5_ARATH | 61.377 | 334 | 127 | 2 | 1 | 333 | 1 | 333 | 1.29e-155 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0751630 | G7K2D1 | 96.429 | 336 | 4 | 1 | 1 | 336 | 1 | 328 | 0.0 | 673 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027820 | Msa0751630 | 0.818807 | 1.616227e-52 | -8.615850e-47 |
| Msa0611210 | Msa0751630 | 0.807399 | 5.151254e-50 | -8.615850e-47 |
| Msa0626450 | Msa0751630 | 0.814538 | 1.463991e-51 | -8.615850e-47 |
| Msa0626490 | Msa0751630 | 0.812252 | 4.654832e-51 | -8.615850e-47 |
| Msa0651550 | Msa0751630 | 0.800324 | 1.520018e-48 | -8.615850e-47 |
| Msa0664600 | Msa0751630 | 0.816157 | 6.390095e-52 | -8.615850e-47 |
| Msa0697160 | Msa0751630 | 0.818253 | 2.158654e-52 | -8.615850e-47 |
| Msa0751630 | Msa0832340 | 0.808321 | 3.280541e-50 | -8.615850e-47 |
| Msa0751630 | Msa1101090 | 0.800844 | 1.191028e-48 | -8.615850e-47 |
| Msa0751630 | Msa1440960 | 0.803910 | 2.781694e-49 | -8.615850e-47 |
| Msa0225100 | Msa0751630 | 0.806172 | 9.358327e-50 | -8.615850e-47 |
| Msa0237420 | Msa0751630 | 0.800216 | 1.599641e-48 | -8.615850e-47 |
| Msa0367870 | Msa0751630 | 0.802281 | 6.043404e-49 | -8.615850e-47 |
| Msa0378720 | Msa0751630 | 0.806734 | 7.122439e-50 | -8.615850e-47 |
| Msa0263920 | Msa0751630 | 0.820554 | 6.452399e-53 | -8.615850e-47 |
| Msa0266180 | Msa0751630 | 0.810968 | 8.851067e-51 | -8.615850e-47 |
| Msa0283330 | Msa0751630 | 0.808310 | 3.298247e-50 | -8.615850e-47 |
| Msa0287740 | Msa0751630 | 0.807044 | 6.126209e-50 | -8.615850e-47 |
| Msa0290720 | Msa0751630 | 0.806999 | 6.260697e-50 | -8.615850e-47 |
| Msa0530050 | Msa0751630 | 0.810216 | 1.286997e-50 | -8.615850e-47 |
| Msa0586750 | Msa0751630 | 0.812166 | 4.859852e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0751630 | MtrunA17_Chr5g0394371 | 96.429 | 336 | 4 | 1 | 1 | 336 | 1 | 328 | 0.0 | 673 |
| Msa0751630 | MtrunA17_Chr1g0150851 | 66.777 | 301 | 100 | 0 | 33 | 333 | 42 | 342 | 2.13e-154 | 437 |
| Msa0751630 | MtrunA17_Chr3g0136181 | 62.371 | 194 | 73 | 0 | 140 | 333 | 30 | 223 | 1.60e-89 | 267 |
| Msa0751630 | MtrunA17_Chr8g0365071 | 33.824 | 272 | 162 | 10 | 8 | 269 | 25 | 288 | 1.35e-38 | 140 |
| Msa0751630 | MtrunA17_Chr5g0413701 | 36.323 | 223 | 134 | 6 | 50 | 269 | 72 | 289 | 3.40e-37 | 136 |
| Msa0751630 | MtrunA17_Chr3g0117881 | 31.132 | 212 | 139 | 6 | 50 | 259 | 61 | 267 | 1.57e-27 | 110 |
| Msa0751630 | MtrunA17_Chr3g0126551 | 30.450 | 289 | 170 | 10 | 7 | 269 | 20 | 303 | 6.89e-27 | 108 |
| Msa0751630 | MtrunA17_Chr1g0158851 | 31.858 | 226 | 145 | 6 | 54 | 275 | 95 | 315 | 1.07e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0751630 | AT5G19530.1 | 61.377 | 334 | 127 | 2 | 1 | 333 | 1 | 333 | 1.31e-156 | 442 |
| Msa0751630 | AT5G19530.2 | 61.846 | 325 | 123 | 1 | 9 | 333 | 3 | 326 | 3.64e-156 | 441 |
| Msa0751630 | AT1G23820.2 | 35.586 | 222 | 135 | 6 | 50 | 268 | 108 | 324 | 8.65e-40 | 143 |
| Msa0751630 | AT1G23820.1 | 34.978 | 223 | 137 | 6 | 50 | 269 | 64 | 281 | 2.29e-38 | 139 |
| Msa0751630 | AT1G70310.1 | 34.222 | 225 | 140 | 6 | 48 | 269 | 66 | 285 | 3.29e-37 | 136 |
| Msa0751630 | AT5G53120.1 | 33.784 | 222 | 140 | 5 | 50 | 269 | 87 | 303 | 3.53e-27 | 110 |
| Msa0751630 | AT5G53120.4 | 33.784 | 222 | 140 | 5 | 50 | 269 | 87 | 303 | 3.53e-27 | 110 |
| Msa0751630 | AT5G53120.2 | 33.784 | 222 | 140 | 5 | 50 | 269 | 87 | 303 | 3.53e-27 | 110 |
| Msa0751630 | AT5G53120.5 | 33.784 | 222 | 140 | 5 | 50 | 269 | 87 | 303 | 3.53e-27 | 110 |
| Msa0751630 | AT5G53120.3 | 33.784 | 222 | 140 | 5 | 50 | 269 | 87 | 303 | 3.53e-27 | 110 |
| Msa0751630 | AT5G53120.7 | 33.784 | 222 | 140 | 5 | 50 | 269 | 104 | 320 | 3.91e-27 | 110 |
| Msa0751630 | AT5G53120.6 | 30.120 | 249 | 140 | 7 | 50 | 269 | 87 | 330 | 1.74e-23 | 100 |
Find 110 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCATCTTATGCTGATATT+TGG | 0.118417 | 5_2:+5097909 | Msa0751630:CDS |
| TCCTATCTTGTGCTTCTATT+TGG | 0.160025 | 5_2:+5098554 | Msa0751630:three_prime_UTR |
| CCCATCTTATGCTGATATTT+GGG | 0.239153 | 5_2:+5097910 | Msa0751630:CDS |
| GGGATTAGCAATGGCATTAA+TGG | 0.250297 | 5_2:+5095142 | Msa0751630:CDS |
| ATTCCACCTTTCTTCAGTTT+TGG | 0.286598 | 5_2:-5097683 | None:intergenic |
| CTACTGCAAGGGAACTTCTT+AGG | 0.306424 | 5_2:+5097245 | Msa0751630:CDS |
| ACCTATGATAACAAAAGTTT+AGG | 0.330445 | 5_2:-5098715 | None:intergenic |
| AGTAGTTTGTTGTGATGTTA+TGG | 0.332004 | 5_2:-5095022 | None:intergenic |
| TAGCAAGGACCTCCTTCTAT+TGG | 0.333191 | 5_2:-5097620 | None:intergenic |
| ATATTATACCCTCCCTAGTT+AGG | 0.348801 | 5_2:-5094814 | None:intergenic |
| TTTAATATCGGTCAAATACT+TGG | 0.356177 | 5_2:-5098678 | None:intergenic |
| CCTATGATAACAAAAGTTTA+GGG | 0.357870 | 5_2:-5098714 | None:intergenic |
| TGATGTGATAGTTGGTGATT+TGG | 0.358662 | 5_2:+5097592 | Msa0751630:CDS |
| TTGTAGGCATTAGTACTTGA+TGG | 0.376546 | 5_2:+5097005 | Msa0751630:intron |
| ATTCACCACCTAATGGTTAT+AGG | 0.379554 | 5_2:+5095182 | Msa0751630:CDS |
| TGAGAGCAAAGCACCATCTA+AGG | 0.385224 | 5_2:-5095240 | None:intergenic |
| GGGAAGTAATTATTGATAGC+TGG | 0.386890 | 5_2:-5094948 | None:intergenic |
| GTACCAAGACATTGCATTGT+TGG | 0.386982 | 5_2:+5096866 | Msa0751630:CDS |
| AGTGAGTTCATAGAAGTCTT+TGG | 0.391432 | 5_2:-5097654 | None:intergenic |
| GTAGCTTACACAAATGGAAA+TGG | 0.402653 | 5_2:+5095121 | Msa0751630:CDS |
| GATGGGATATGAGCTGAATA+AGG | 0.405736 | 5_2:-5097893 | None:intergenic |
| GATGGTGCTTTGCTCTCAAT+AGG | 0.407800 | 5_2:+5095245 | Msa0751630:CDS |
| TAGGTAGCCAATGTTTGGTT+TGG | 0.410891 | 5_2:+5098733 | Msa0751630:three_prime_UTR |
| GAAGAGAATAAATATCTTGA+TGG | 0.412399 | 5_2:+5098111 | Msa0751630:CDS |
| GGAATATTTGTGACACAGGC+AGG | 0.413534 | 5_2:+5097701 | Msa0751630:CDS |
| TGATGTTGCGAGTTTAATAT+CGG | 0.418972 | 5_2:-5098690 | None:intergenic |
| ATATATTAGAGTAGTAGTAT+AGG | 0.425521 | 5_2:-5098589 | None:intergenic |
| AAGCAAAATAAAATCCTCAT+TGG | 0.425731 | 5_2:-5094888 | None:intergenic |
| TCCAAATAGAAGCACAAGAT+AGG | 0.430681 | 5_2:-5098555 | None:intergenic |
| GGAGCAGCTAGGTTCATATA+TGG | 0.430922 | 5_2:+5098308 | Msa0751630:CDS |
| CAAACGCGAGTAAAAGTGTT+TGG | 0.433814 | 5_2:-5098759 | None:intergenic |
| GGAAGTAATTATTGATAGCT+GGG | 0.434182 | 5_2:-5094947 | None:intergenic |
| GTGACACAGGCAGGGCCTGC+TGG | 0.446150 | 5_2:+5097710 | Msa0751630:CDS |
| GATAAGATACGGTCCTAACT+AGG | 0.447008 | 5_2:+5094801 | Msa0751630:five_prime_UTR |
| TATAAGAAGGAGAAATGAAA+GGG | 0.454430 | 5_2:-5094968 | None:intergenic |
| TATCATAGGTAGCCAATGTT+TGG | 0.456758 | 5_2:+5098728 | Msa0751630:three_prime_UTR |
| CCCCAAATATCAGCATAAGA+TGG | 0.466906 | 5_2:-5097911 | None:intergenic |
| TGATATTTGGGGATGGGTCC+TGG | 0.469083 | 5_2:+5097922 | Msa0751630:CDS |
| TATAACCATTAGGTGGTGAA+TGG | 0.470001 | 5_2:-5095180 | None:intergenic |
| GTGAGAGATCGTATATAAGA+AGG | 0.473033 | 5_2:-5094981 | None:intergenic |
| GGTGAAGTAGCTTACACAAA+TGG | 0.475512 | 5_2:+5095115 | Msa0751630:CDS |
| TTATGCTGATATTTGGGGAT+GGG | 0.480221 | 5_2:+5097916 | Msa0751630:CDS |
| AAAAGCCATTCACCACCTAA+TGG | 0.481909 | 5_2:+5095175 | Msa0751630:CDS |
| GACTGCAGCATCTTGCATAC+AGG | 0.487741 | 5_2:+5096834 | Msa0751630:intron |
| GATTTGGCTGATCCAATAGA+AGG | 0.493154 | 5_2:+5097608 | Msa0751630:CDS |
| GCTTGCAAGTGTTGTATCAA+TGG | 0.493608 | 5_2:+5098519 | Msa0751630:three_prime_UTR |
| CAGGATGAACAAGACATTCA+TGG | 0.494899 | 5_2:-5097064 | None:intergenic |
| TTGTTGGACACAAAGCCCTT+TGG | 0.495311 | 5_2:+5096882 | Msa0751630:CDS |
| TAGCTTACACAAATGGAAAT+GGG | 0.497182 | 5_2:+5095122 | Msa0751630:CDS |
| CTTATGCTGATATTTGGGGA+TGG | 0.502652 | 5_2:+5097915 | Msa0751630:CDS |
| TTTATTATGGGAGGAGGAGA+AGG | 0.503413 | 5_2:+5097220 | Msa0751630:CDS |
| AGATTGAAGAGAACCTTAGA+TGG | 0.508186 | 5_2:+5095227 | Msa0751630:CDS |
| GAGAGGTATGATGTGATAGT+TGG | 0.511395 | 5_2:+5097584 | Msa0751630:CDS |
| TTCTTCTTAGTTGTGATCAA+AGG | 0.514924 | 5_2:+5095082 | Msa0751630:five_prime_UTR |
| TGTTACAGGGCTGAACTAGA+AGG | 0.518637 | 5_2:+5097554 | Msa0751630:intron |
| AGTAAAGGATATACATAGGA+TGG | 0.521052 | 5_2:-5097097 | None:intergenic |
| ACAATGCAATGTCTTGGTAC+TGG | 0.522446 | 5_2:-5096863 | None:intergenic |
| CCCAAATATCAGCATAAGAT+GGG | 0.522916 | 5_2:-5097910 | None:intergenic |
| ATGGTTATAGGAAAAGTTGT+TGG | 0.523730 | 5_2:+5095194 | Msa0751630:CDS |
| TGTAGGCATTAGTACTTGAT+GGG | 0.529003 | 5_2:+5097006 | Msa0751630:intron |
| CTCAAGCCAAAACTGAAGAA+AGG | 0.529230 | 5_2:+5097677 | Msa0751630:CDS |
| TATCTAATTCTTCAGCACTA+AGG | 0.537029 | 5_2:-5098065 | None:intergenic |
| ATAGGATGGTGAAGAAGAGC+AGG | 0.537058 | 5_2:-5097083 | None:intergenic |
| TGGTGAAAGTACAAGCCAAA+GGG | 0.542916 | 5_2:-5098484 | None:intergenic |
| ACAGGCTTCAGATTCTCCAT+TGG | 0.548267 | 5_2:+5098041 | Msa0751630:intron |
| CGACTTCAAGTCTCGAGTCA+TGG | 0.550453 | 5_2:-5097444 | None:intergenic |
| GTTTGTTGTGATGTTATGGA+TGG | 0.550634 | 5_2:-5095018 | None:intergenic |
| TATATAAGAACCTTGCCAAA+GGG | 0.554067 | 5_2:-5096897 | None:intergenic |
| TTAATATCGGTCAAATACTT+GGG | 0.554417 | 5_2:-5098677 | None:intergenic |
| GTGTGGCTGAATATTCCAGC+AGG | 0.556371 | 5_2:-5097725 | None:intergenic |
| CCATCTTATGCTGATATTTG+GGG | 0.559813 | 5_2:+5097911 | Msa0751630:CDS |
| TAAGAAATGAAGATAAGATA+CGG | 0.567425 | 5_2:+5094790 | None:intergenic |
| AAGCACAAGATAGGAACCAT+TGG | 0.568399 | 5_2:-5098546 | None:intergenic |
| ATATAAGAAGGAGAAATGAA+AGG | 0.569546 | 5_2:-5094969 | None:intergenic |
| ACACTTGAAAACTTGTCTCA+AGG | 0.572101 | 5_2:-5097774 | None:intergenic |
| GGACACAAAGCCCTTTGGCA+AGG | 0.572609 | 5_2:+5096887 | Msa0751630:CDS |
| TCTTCAGCACTAAGGTCCAA+TGG | 0.578062 | 5_2:-5098057 | None:intergenic |
| TTGGTGTAAAGTTTATAGCA+AGG | 0.578661 | 5_2:-5097635 | None:intergenic |
| GCTAGGTTCATATATGGTCA+TGG | 0.584533 | 5_2:+5098314 | Msa0751630:CDS |
| ATAAGATACGGTCCTAACTA+GGG | 0.584903 | 5_2:+5094802 | Msa0751630:five_prime_UTR |
| AGGTGGAATATTTGTGACAC+AGG | 0.592885 | 5_2:+5097697 | Msa0751630:CDS |
| TTGTATCAATGGACAACCAA+TGG | 0.592903 | 5_2:+5098530 | Msa0751630:three_prime_UTR |
| AATACATTACACACTGCGTG+CGG | 0.594705 | 5_2:-5094851 | None:intergenic |
| ATACATTACACACTGCGTGC+GGG | 0.595018 | 5_2:-5094850 | None:intergenic |
| GTATATAAGAACCTTGCCAA+AGG | 0.595987 | 5_2:-5096898 | None:intergenic |
| AATGGAAATGGGATTAGCAA+TGG | 0.596415 | 5_2:+5095133 | Msa0751630:CDS |
| TGTCCAACAATGCAATGTCT+TGG | 0.599107 | 5_2:-5096869 | None:intergenic |
| AGCTGGGAAATCTAGCAAAG+TGG | 0.604706 | 5_2:-5094931 | None:intergenic |
| GAGGAGAAGGTTCTACTGCA+AGG | 0.606812 | 5_2:+5097233 | Msa0751630:CDS |
| AACTAGAAGGTAAAGAAGAG+AGG | 0.608104 | 5_2:+5097567 | Msa0751630:CDS |
| AGGAGAAGGTTCTACTGCAA+GGG | 0.608749 | 5_2:+5097234 | Msa0751630:CDS |
| GAATATTTGTGACACAGGCA+GGG | 0.611314 | 5_2:+5097702 | Msa0751630:CDS |
| ATCATACTTAGTTGTAAACA+AGG | 0.614887 | 5_2:+5097414 | Msa0751630:CDS |
| AAGCCAAAACTGAAGAAAGG+TGG | 0.618874 | 5_2:+5097680 | Msa0751630:CDS |
| TTGGTCGCCAAACCAAACAT+TGG | 0.622306 | 5_2:-5098740 | None:intergenic |
| GTGGTGAAAGTACAAGCCAA+AGG | 0.632818 | 5_2:-5098485 | None:intergenic |
| GATACGGTCCTAACTAGGGA+GGG | 0.633478 | 5_2:+5094806 | Msa0751630:five_prime_UTR |
| GTACTTTACGAAAACCAATG+AGG | 0.636929 | 5_2:+5094874 | Msa0751630:five_prime_UTR |
| CACACAATGCAAGTTAACAA+AGG | 0.637771 | 5_2:+5098389 | Msa0751630:three_prime_UTR |
| ATTAGCAATGGCATTAATGG+AGG | 0.639499 | 5_2:+5095145 | Msa0751630:CDS |
| AGATACGGTCCTAACTAGGG+AGG | 0.644379 | 5_2:+5094805 | Msa0751630:five_prime_UTR |
| GAAACTCATGTATACACAGA+GGG | 0.651343 | 5_2:+5098287 | Msa0751630:CDS |
| TATACACAGAGGGAGCAGCT+AGG | 0.656967 | 5_2:+5098297 | Msa0751630:CDS |
| TAGATATCAGAATGAGACAG+AGG | 0.660960 | 5_2:+5098082 | Msa0751630:CDS |
| TGAAACTCATGTATACACAG+AGG | 0.676552 | 5_2:+5098286 | Msa0751630:CDS |
| TTGGCTGATCCAATAGAAGG+AGG | 0.689346 | 5_2:+5097611 | Msa0751630:CDS |
| AAGTCGTCATCAATGACGCG+AGG | 0.690546 | 5_2:+5097461 | Msa0751630:CDS |
| GGTGAAAGTACAAGCCAAAG+GGG | 0.703075 | 5_2:-5098483 | None:intergenic |
| TGTAATGTGCGACATTGATG+AGG | 0.706181 | 5_2:+5097288 | Msa0751630:CDS |
| TACATGAGAAAACTTCTGTG+TGG | 0.723090 | 5_2:-5097742 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATCTAAACTATAATA+TGG | - | chr5_2:5095372-5095391 | None:intergenic | 10.0% |
| !! | AAATAAGAATAAGAAATAAA+AGG | - | chr5_2:5095928-5095947 | None:intergenic | 10.0% |
| !! | TTATGAAAATAATTAAAATC+CGG | + | chr5_2:5096280-5096299 | Msa0751630:intron | 10.0% |
| !! | AACATTTAACATAAATTTAT+GGG | - | chr5_2:5096773-5096792 | None:intergenic | 10.0% |
| !! | AAACATTTAACATAAATTTA+TGG | - | chr5_2:5096774-5096793 | None:intergenic | 10.0% |
| !!! | ATTTAATTTAAGAAAAAATG+TGG | + | chr5_2:5098610-5098629 | Msa0751630:three_prime_UTR | 10.0% |
| !! | TATGAAAATAATTAAAATCC+GGG | + | chr5_2:5096281-5096300 | Msa0751630:intron | 15.0% |
| !!! | AAATGGTCTTATATAAATTT+AGG | + | chr5_2:5096568-5096587 | Msa0751630:intron | 15.0% |
| !!! | AATGGTCTTATATAAATTTA+GGG | + | chr5_2:5096569-5096588 | Msa0751630:intron | 15.0% |
| !!! | AATACTTTTCTTATAAGTAA+AGG | - | chr5_2:5096936-5096955 | None:intergenic | 15.0% |
| !!! | CCAAAAAATGTTTTTATTAT+GGG | + | chr5_2:5097208-5097227 | Msa0751630:CDS | 15.0% |
| !!! | TTTTTTTATACAATTTCAAG+TGG | + | chr5_2:5097337-5097356 | Msa0751630:intron | 15.0% |
| !! | CAATTATATATAAATTTACC+AGG | - | chr5_2:5097943-5097962 | None:intergenic | 15.0% |
| !!! | TGATTTTGTTTTGTTTATTA+TGG | + | chr5_2:5098637-5098656 | Msa0751630:three_prime_UTR | 15.0% |
| !! | CTAGCTTAAAAAACAAAAAA+TGG | - | chr5_2:5095612-5095631 | None:intergenic | 20.0% |
| !!! | CATTTTTTGTTTTTTAAGCT+AGG | + | chr5_2:5095610-5095629 | Msa0751630:intron | 20.0% |
| !! | TAAGAATAAGAAATAAAAGG+TGG | - | chr5_2:5095925-5095944 | None:intergenic | 20.0% |
| !!! | ATTTTTCAATGAAATAACTG+AGG | + | chr5_2:5096252-5096271 | Msa0751630:intron | 20.0% |
| !! | TTATATAAGACCATTTACAA+TGG | - | chr5_2:5096564-5096583 | None:intergenic | 20.0% |
| !!! | ACTTTTTATTCTCTTTGTTT+TGG | + | chr5_2:5096807-5096826 | Msa0751630:intron | 20.0% |
| !! | TAACATAGTAGATAATTAAG+TGG | - | chr5_2:5096978-5096997 | None:intergenic | 20.0% |
| !!! | ACTATGTTATATACTTTTGT+AGG | + | chr5_2:5096989-5097008 | Msa0751630:intron | 20.0% |
| !!! | GCCAAAAAATGTTTTTATTA+TGG | + | chr5_2:5097207-5097226 | Msa0751630:CDS | 20.0% |
| !!! | CCCATAATAAAAACATTTTT+TGG | - | chr5_2:5097211-5097230 | None:intergenic | 20.0% |
| !!! | AAAAATGTTTTTATTATGGG+AGG | + | chr5_2:5097211-5097230 | Msa0751630:CDS | 20.0% |
| !!! | ATTAATGTATTGATGTTTGA+TGG | + | chr5_2:5097365-5097384 | Msa0751630:intron | 20.0% |
| !!! | ATTTATACTTTTGATGTTAC+AGG | + | chr5_2:5097540-5097559 | Msa0751630:intron | 20.0% |
| !!! | TTTATACTTTTGATGTTACA+GGG | + | chr5_2:5097541-5097560 | Msa0751630:intron | 20.0% |
| !! | AAACATAGAATACTTAGATT+TGG | - | chr5_2:5098002-5098021 | None:intergenic | 20.0% |
| !!! | TTCTATGTTTTTTTTTTCCT+TGG | + | chr5_2:5098012-5098031 | Msa0751630:intron | 20.0% |
| !! | ATATATTAGAGTAGTAGTAT+AGG | - | chr5_2:5098592-5098611 | None:intergenic | 20.0% |
| ! | AAGCAAAATAAAATCCTCAT+TGG | - | chr5_2:5094891-5094910 | None:intergenic | 25.0% |
| ! | TATAAGAAGGAGAAATGAAA+GGG | - | chr5_2:5094971-5094990 | None:intergenic | 25.0% |
| ! | ATATAAGAAGGAGAAATGAA+AGG | - | chr5_2:5094972-5094991 | None:intergenic | 25.0% |
| ! | CTACTATCTTCCTTTATATA+TGG | + | chr5_2:5095418-5095437 | Msa0751630:intron | 25.0% |
| !!! | TTCATGTTGTTTCTTTTAGA+AGG | + | chr5_2:5095465-5095484 | Msa0751630:intron | 25.0% |
| !! | ACAAAAAATGGCCAAAATTT+TGG | - | chr5_2:5095600-5095619 | None:intergenic | 25.0% |
| !! | ATACTCTTTTTGCCTTTATT+TGG | + | chr5_2:5095663-5095682 | Msa0751630:intron | 25.0% |
| ! | TGTTGAATGAAAAAAACCAT+TGG | - | chr5_2:5095892-5095911 | None:intergenic | 25.0% |
| ! | AATAAGAAATAAAAGGTGGT+GGG | - | chr5_2:5095921-5095940 | None:intergenic | 25.0% |
| ! | ATTAAACAGACCATTGTAAA+TGG | + | chr5_2:5096551-5096570 | Msa0751630:intron | 25.0% |
| ! | TTTCTTAACTTATGCCTTAA+GGG | - | chr5_2:5096610-5096629 | None:intergenic | 25.0% |
| ! | ATTTCTTAACTTATGCCTTA+AGG | - | chr5_2:5096611-5096630 | None:intergenic | 25.0% |
| !! | CAAATGTAGAAAGTTTTTCT+TGG | + | chr5_2:5096631-5096650 | Msa0751630:intron | 25.0% |
| !!! | TTTTATTCTCTTTGTTTTGG+TGG | + | chr5_2:5096810-5096829 | Msa0751630:intron | 25.0% |
| !!! | TTTATTCTCTTTGTTTTGGT+GGG | + | chr5_2:5096811-5096830 | Msa0751630:intron | 25.0% |
| !! | TGTTTTTCATTCCATTTTCT+AGG | + | chr5_2:5097185-5097204 | Msa0751630:intron | 25.0% |
| ! | ATCATACTTAGTTGTAAACA+AGG | + | chr5_2:5097414-5097433 | Msa0751630:CDS | 25.0% |
| ! | GAAGAGAATAAATATCTTGA+TGG | + | chr5_2:5098111-5098130 | Msa0751630:CDS | 25.0% |
| !!! | TTTTGTTTTGATTTGAAGCT+TGG | - | chr5_2:5098353-5098372 | None:intergenic | 25.0% |
| ! | TTAATATCGGTCAAATACTT+GGG | - | chr5_2:5098680-5098699 | None:intergenic | 25.0% |
| ! | TTTAATATCGGTCAAATACT+TGG | - | chr5_2:5098681-5098700 | None:intergenic | 25.0% |
| ! | CCTATGATAACAAAAGTTTA+GGG | - | chr5_2:5098717-5098736 | None:intergenic | 25.0% |
| ! | ACCTATGATAACAAAAGTTT+AGG | - | chr5_2:5098718-5098737 | None:intergenic | 25.0% |
| ! | GGAAGTAATTATTGATAGCT+GGG | - | chr5_2:5094950-5094969 | None:intergenic | 30.0% |
| !! | AGTAGTTTGTTGTGATGTTA+TGG | - | chr5_2:5095025-5095044 | None:intergenic | 30.0% |
| TTCTTCTTAGTTGTGATCAA+AGG | + | chr5_2:5095082-5095101 | Msa0751630:five_prime_UTR | 30.0% | |
| TGTGATCAAAGGAAAAAAGA+TGG | + | chr5_2:5095093-5095112 | Msa0751630:exon | 30.0% | |
| GTGATCAAAGGAAAAAAGAT+GGG | + | chr5_2:5095094-5095113 | Msa0751630:exon | 30.0% | |
| TAGCTTACACAAATGGAAAT+GGG | + | chr5_2:5095122-5095141 | Msa0751630:CDS | 30.0% | |
| ! | CAACTTTTCCTATAACCATT+AGG | - | chr5_2:5095193-5095212 | None:intergenic | 30.0% |
| ATGGTTATAGGAAAAGTTGT+TGG | + | chr5_2:5095194-5095213 | Msa0751630:CDS | 30.0% | |
| CTATCTTCCTTTATATATGG+CGG | + | chr5_2:5095421-5095440 | Msa0751630:intron | 30.0% | |
| TGAAAAGATAATAGAAGCCA+AGG | + | chr5_2:5095492-5095511 | Msa0751630:intron | 30.0% | |
| ! | TTTTCTTGTCGCCAAAATTT+TGG | + | chr5_2:5095586-5095605 | Msa0751630:intron | 30.0% |
| !! | CCTTTTTCATAGCCAAATAA+AGG | - | chr5_2:5095678-5095697 | None:intergenic | 30.0% |
| ! | CCTTTATTTGGCTATGAAAA+AGG | + | chr5_2:5095675-5095694 | Msa0751630:intron | 30.0% |
| CACTATTAGACCATTTACAA+TGG | + | chr5_2:5095766-5095785 | Msa0751630:intron | 30.0% | |
| ATGTGTTGAACCATTGTAAA+TGG | - | chr5_2:5095779-5095798 | None:intergenic | 30.0% | |
| AATGAAAAAAACCATTGGAG+AGG | - | chr5_2:5095887-5095906 | None:intergenic | 30.0% | |
| ATAAGAAATAAAAGGTGGTG+GGG | - | chr5_2:5095920-5095939 | None:intergenic | 30.0% | |
| GAATAAGAAATAAAAGGTGG+TGG | - | chr5_2:5095922-5095941 | None:intergenic | 30.0% | |
| GATGAAGATAGTGAAAAACT+TGG | + | chr5_2:5096133-5096152 | Msa0751630:intron | 30.0% | |
| AACCAAGTCTCTATTTATAG+AGG | + | chr5_2:5096183-5096202 | Msa0751630:intron | 30.0% | |
| TTCCTCTATAAATAGAGACT+TGG | - | chr5_2:5096188-5096207 | None:intergenic | 30.0% | |
| !! | CAAGGCATTTTCATATTGAA+AGG | + | chr5_2:5096525-5096544 | Msa0751630:intron | 30.0% |
| ACAAGTTAAGGAGCTTAAAA+TGG | - | chr5_2:5096725-5096744 | None:intergenic | 30.0% | |
| !!! | TTATTCTCTTTGTTTTGGTG+GGG | + | chr5_2:5096812-5096831 | Msa0751630:intron | 30.0% |
| TATATAAGAACCTTGCCAAA+GGG | - | chr5_2:5096900-5096919 | None:intergenic | 30.0% | |
| ATAGTAGATAATTAAGTGGC+TGG | - | chr5_2:5096974-5096993 | None:intergenic | 30.0% | |
| AGTAAAGGATATACATAGGA+TGG | - | chr5_2:5097100-5097119 | None:intergenic | 30.0% | |
| GAAGAGTAAAGGATATACAT+AGG | - | chr5_2:5097104-5097123 | None:intergenic | 30.0% | |
| CAGTTATTGAAGAAGAGTAA+AGG | - | chr5_2:5097115-5097134 | None:intergenic | 30.0% | |
| !!! | ACATTTTTTGGCCTAGAAAA+TGG | - | chr5_2:5097199-5097218 | None:intergenic | 30.0% |
| !! | AATGTTTTTATTATGGGAGG+AGG | + | chr5_2:5097214-5097233 | Msa0751630:CDS | 30.0% |
| TTGGTGTAAAGTTTATAGCA+AGG | - | chr5_2:5097638-5097657 | None:intergenic | 30.0% | |
| TTTATTCATGTTTGCAGATG+TGG | + | chr5_2:5097868-5097887 | Msa0751630:intron | 30.0% | |
| TATCTAATTCTTCAGCACTA+AGG | - | chr5_2:5098068-5098087 | None:intergenic | 30.0% | |
| TAGACATTGAATGATGCTAT+TGG | + | chr5_2:5098251-5098270 | Msa0751630:intron | 30.0% | |
| AAAAAAAGTGAAGAGCAGAA+AGG | - | chr5_2:5098451-5098470 | None:intergenic | 30.0% | |
| ACTTTCACCACTCAAAAAAA+AGG | + | chr5_2:5098497-5098516 | Msa0751630:three_prime_UTR | 30.0% | |
| TGATGTTGCGAGTTTAATAT+CGG | - | chr5_2:5098693-5098712 | None:intergenic | 30.0% | |
| !! | CCCTAAACTTTTGTTATCAT+AGG | + | chr5_2:5098714-5098733 | Msa0751630:three_prime_UTR | 30.0% |
| ATAAGATACGGTCCTAACTA+GGG | + | chr5_2:5094802-5094821 | Msa0751630:five_prime_UTR | 35.0% | |
| ATATTATACCCTCCCTAGTT+AGG | - | chr5_2:5094817-5094836 | None:intergenic | 35.0% | |
| GTACTTTACGAAAACCAATG+AGG | + | chr5_2:5094874-5094893 | Msa0751630:five_prime_UTR | 35.0% | |
| ! | GGGAAGTAATTATTGATAGC+TGG | - | chr5_2:5094951-5094970 | None:intergenic | 35.0% |
| GTGAGAGATCGTATATAAGA+AGG | - | chr5_2:5094984-5095003 | None:intergenic | 35.0% | |
| !! | GTTTGTTGTGATGTTATGGA+TGG | - | chr5_2:5095021-5095040 | None:intergenic | 35.0% |
| GTAGCTTACACAAATGGAAA+TGG | + | chr5_2:5095121-5095140 | Msa0751630:CDS | 35.0% | |
| ! | AATGGAAATGGGATTAGCAA+TGG | + | chr5_2:5095133-5095152 | Msa0751630:CDS | 35.0% |
| ATTAGCAATGGCATTAATGG+AGG | + | chr5_2:5095145-5095164 | Msa0751630:CDS | 35.0% | |
| TATAACCATTAGGTGGTGAA+TGG | - | chr5_2:5095183-5095202 | None:intergenic | 35.0% | |
| ATTCACCACCTAATGGTTAT+AGG | + | chr5_2:5095182-5095201 | Msa0751630:CDS | 35.0% | |
| ! | CTTTTCCTATAACCATTAGG+TGG | - | chr5_2:5095190-5095209 | None:intergenic | 35.0% |
| AGATTGAAGAGAACCTTAGA+TGG | + | chr5_2:5095227-5095246 | Msa0751630:CDS | 35.0% | |
| !!! | GTGTGTAGCTTTTTCATTCT+TGG | - | chr5_2:5095339-5095358 | None:intergenic | 35.0% |
| !!! | ACAAGAAGGTGCTTTTTCAT+TGG | + | chr5_2:5095516-5095535 | Msa0751630:intron | 35.0% |
| !!! | CAAGAAGGTGCTTTTTCATT+GGG | + | chr5_2:5095517-5095536 | Msa0751630:intron | 35.0% |
| CGACAAGAAAACTAGACATT+AGG | - | chr5_2:5095577-5095596 | None:intergenic | 35.0% | |
| !! | TTGAAAAAGTGGGTGTTGAA+GGG | - | chr5_2:5095808-5095827 | None:intergenic | 35.0% |
| !! | ATTGAAAAAGTGGGTGTTGA+AGG | - | chr5_2:5095809-5095828 | None:intergenic | 35.0% |
| GTGTTGGGAATTGAAAAAGT+GGG | - | chr5_2:5095818-5095837 | None:intergenic | 35.0% | |
| ! | AGTGTTGGGAATTGAAAAAG+TGG | - | chr5_2:5095819-5095838 | None:intergenic | 35.0% |
| TTAAGAGAGAGAAGATGATG+TGG | - | chr5_2:5095842-5095861 | None:intergenic | 35.0% | |
| TTCAACTTTAACCTCTCCAA+TGG | + | chr5_2:5095873-5095892 | Msa0751630:intron | 35.0% | |
| ! | GAGACTTGGTTCATTTGATT+TGG | - | chr5_2:5096174-5096193 | None:intergenic | 35.0% |
| !! | TTGGAATTTGATTGGTTTCC+CGG | - | chr5_2:5096302-5096321 | None:intergenic | 35.0% |
| AAGAAGATTCCTTGACTGTT+GGG | - | chr5_2:5096334-5096353 | None:intergenic | 35.0% | |
| TGTATTACACTCGCCAAAAA+CGG | + | chr5_2:5096394-5096413 | Msa0751630:intron | 35.0% | |
| CTGCTTTCATTTGTGTTGAA+CGG | + | chr5_2:5096448-5096467 | Msa0751630:intron | 35.0% | |
| !! | ATGGCTTGTTGAATATGACA+TGG | - | chr5_2:5096492-5096511 | None:intergenic | 35.0% |
| AATATGAAAATGCCTTGCAG+TGG | - | chr5_2:5096522-5096541 | None:intergenic | 35.0% | |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr5_2:5096593-5096612 | Msa0751630:intron | 35.0% |
| GTATATAAGAACCTTGCCAA+AGG | - | chr5_2:5096901-5096920 | None:intergenic | 35.0% | |
| TTGTAGGCATTAGTACTTGA+TGG | + | chr5_2:5097005-5097024 | Msa0751630:intron | 35.0% | |
| TGTAGGCATTAGTACTTGAT+GGG | + | chr5_2:5097006-5097025 | Msa0751630:intron | 35.0% | |
| TATTGATGTTTGATGGAAGC+AGG | + | chr5_2:5097372-5097391 | Msa0751630:intron | 35.0% | |
| AACTAGAAGGTAAAGAAGAG+AGG | + | chr5_2:5097567-5097586 | Msa0751630:CDS | 35.0% | |
| !! | TGATGTGATAGTTGGTGATT+TGG | + | chr5_2:5097592-5097611 | Msa0751630:CDS | 35.0% |
| AGTGAGTTCATAGAAGTCTT+TGG | - | chr5_2:5097657-5097676 | None:intergenic | 35.0% | |
| ! | ATTCCACCTTTCTTCAGTTT+TGG | - | chr5_2:5097686-5097705 | None:intergenic | 35.0% |
| TACATGAGAAAACTTCTGTG+TGG | - | chr5_2:5097745-5097764 | None:intergenic | 35.0% | |
| ACACTTGAAAACTTGTCTCA+AGG | - | chr5_2:5097777-5097796 | None:intergenic | 35.0% | |
| TCCCATCTTATGCTGATATT+TGG | + | chr5_2:5097909-5097928 | Msa0751630:CDS | 35.0% | |
| CCCAAATATCAGCATAAGAT+GGG | - | chr5_2:5097913-5097932 | None:intergenic | 35.0% | |
| CCCATCTTATGCTGATATTT+GGG | + | chr5_2:5097910-5097929 | Msa0751630:CDS | 35.0% | |
| CCATCTTATGCTGATATTTG+GGG | + | chr5_2:5097911-5097930 | Msa0751630:CDS | 35.0% | |
| TTATGCTGATATTTGGGGAT+GGG | + | chr5_2:5097916-5097935 | Msa0751630:CDS | 35.0% | |
| !!! | TTTTTTCCTTGGCCTATAAC+AGG | + | chr5_2:5098023-5098042 | Msa0751630:intron | 35.0% |
| TAGATATCAGAATGAGACAG+AGG | + | chr5_2:5098082-5098101 | Msa0751630:CDS | 35.0% | |
| GTTCGTAATTCGTAAGTGAA+AGG | + | chr5_2:5098171-5098190 | Msa0751630:intron | 35.0% | |
| TGAAACTCATGTATACACAG+AGG | + | chr5_2:5098286-5098305 | Msa0751630:CDS | 35.0% | |
| GAAACTCATGTATACACAGA+GGG | + | chr5_2:5098287-5098306 | Msa0751630:CDS | 35.0% | |
| CACACAATGCAAGTTAACAA+AGG | + | chr5_2:5098389-5098408 | Msa0751630:three_prime_UTR | 35.0% | |
| !!! | TTCTTCCTTTTTTACCCCTT+TGG | + | chr5_2:5098469-5098488 | Msa0751630:three_prime_UTR | 35.0% |
| !!! | TTGCAAGCCTTTTTTTTGAG+TGG | - | chr5_2:5098507-5098526 | None:intergenic | 35.0% |
| TTGTATCAATGGACAACCAA+TGG | + | chr5_2:5098530-5098549 | Msa0751630:three_prime_UTR | 35.0% | |
| TCCTATCTTGTGCTTCTATT+TGG | + | chr5_2:5098554-5098573 | Msa0751630:three_prime_UTR | 35.0% | |
| ! | TCCAAATAGAAGCACAAGAT+AGG | - | chr5_2:5098558-5098577 | None:intergenic | 35.0% |
| TATCATAGGTAGCCAATGTT+TGG | + | chr5_2:5098728-5098747 | Msa0751630:three_prime_UTR | 35.0% | |
| GATAAGATACGGTCCTAACT+AGG | + | chr5_2:5094801-5094820 | Msa0751630:five_prime_UTR | 40.0% | |
| AATACATTACACACTGCGTG+CGG | - | chr5_2:5094854-5094873 | None:intergenic | 40.0% | |
| GGTGAAGTAGCTTACACAAA+TGG | + | chr5_2:5095115-5095134 | Msa0751630:CDS | 40.0% | |
| ! | GGGATTAGCAATGGCATTAA+TGG | + | chr5_2:5095142-5095161 | Msa0751630:CDS | 40.0% |
| AAAAGCCATTCACCACCTAA+TGG | + | chr5_2:5095175-5095194 | Msa0751630:CDS | 40.0% | |
| CAAAGAGCCGCCATATATAA+AGG | - | chr5_2:5095431-5095450 | None:intergenic | 40.0% | |
| CTTTATATATGGCGGCTCTT+TGG | + | chr5_2:5095429-5095448 | Msa0751630:intron | 40.0% | |
| ATAGAAGCCAAGGAACAAGA+AGG | + | chr5_2:5095502-5095521 | Msa0751630:intron | 40.0% | |
| !! | AAAAGCACCTTCTTGTTCCT+TGG | - | chr5_2:5095512-5095531 | None:intergenic | 40.0% |
| ! | AGAAGATGATGTGGAGTGTT+GGG | - | chr5_2:5095833-5095852 | None:intergenic | 40.0% |
| AGAAGATTCCTTGACTGTTG+GGG | - | chr5_2:5096333-5096352 | None:intergenic | 40.0% | |
| GAAGAAGATTCCTTGACTGT+TGG | - | chr5_2:5096335-5096354 | None:intergenic | 40.0% | |
| !!! | GTTTTTGGCGAGTGTAATAC+AGG | - | chr5_2:5096395-5096414 | None:intergenic | 40.0% |
| ! | CAATTTGAGTGGTCCGTTTT+TGG | - | chr5_2:5096410-5096429 | None:intergenic | 40.0% |
| ! | GCTTGTTGAATATGACATGG+AGG | - | chr5_2:5096489-5096508 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr5_2:5096749-5096768 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr5_2:5096750-5096769 | None:intergenic | 40.0% |
| ACAATGCAATGTCTTGGTAC+TGG | - | chr5_2:5096866-5096885 | None:intergenic | 40.0% | |
| GTACCAAGACATTGCATTGT+TGG | + | chr5_2:5096866-5096885 | Msa0751630:CDS | 40.0% | |
| TGTCCAACAATGCAATGTCT+TGG | - | chr5_2:5096872-5096891 | None:intergenic | 40.0% | |
| CAGGATGAACAAGACATTCA+TGG | - | chr5_2:5097067-5097086 | None:intergenic | 40.0% | |
| TTTATTATGGGAGGAGGAGA+AGG | + | chr5_2:5097220-5097239 | Msa0751630:CDS | 40.0% | |
| TGTAATGTGCGACATTGATG+AGG | + | chr5_2:5097288-5097307 | Msa0751630:CDS | 40.0% | |
| ! | GAGAGGTATGATGTGATAGT+TGG | + | chr5_2:5097584-5097603 | Msa0751630:CDS | 40.0% |
| GATTTGGCTGATCCAATAGA+AGG | + | chr5_2:5097608-5097627 | Msa0751630:CDS | 40.0% | |
| CTCAAGCCAAAACTGAAGAA+AGG | + | chr5_2:5097677-5097696 | Msa0751630:CDS | 40.0% | |
| AAGCCAAAACTGAAGAAAGG+TGG | + | chr5_2:5097680-5097699 | Msa0751630:CDS | 40.0% | |
| AGGTGGAATATTTGTGACAC+AGG | + | chr5_2:5097697-5097716 | Msa0751630:CDS | 40.0% | |
| GAATATTTGTGACACAGGCA+GGG | + | chr5_2:5097702-5097721 | Msa0751630:CDS | 40.0% | |
| GATGGGATATGAGCTGAATA+AGG | - | chr5_2:5097896-5097915 | None:intergenic | 40.0% | |
| CCCCAAATATCAGCATAAGA+TGG | - | chr5_2:5097914-5097933 | None:intergenic | 40.0% | |
| CTTATGCTGATATTTGGGGA+TGG | + | chr5_2:5097915-5097934 | Msa0751630:CDS | 40.0% | |
| ! | GAGAATCTGAAGCCTGTTAT+AGG | - | chr5_2:5098038-5098057 | None:intergenic | 40.0% |
| CATTGAATGATGCTATTGGC+AGG | + | chr5_2:5098255-5098274 | Msa0751630:intron | 40.0% | |
| GCTAGGTTCATATATGGTCA+TGG | + | chr5_2:5098314-5098333 | Msa0751630:CDS | 40.0% | |
| ACAAGCCAAAGGGGTAAAAA+AGG | - | chr5_2:5098477-5098496 | None:intergenic | 40.0% | |
| ! | TGGTGAAAGTACAAGCCAAA+GGG | - | chr5_2:5098487-5098506 | None:intergenic | 40.0% |
| ! | GCTTGCAAGTGTTGTATCAA+TGG | + | chr5_2:5098519-5098538 | Msa0751630:three_prime_UTR | 40.0% |
| AAGCACAAGATAGGAACCAT+TGG | - | chr5_2:5098549-5098568 | None:intergenic | 40.0% | |
| TAGGTAGCCAATGTTTGGTT+TGG | + | chr5_2:5098733-5098752 | Msa0751630:three_prime_UTR | 40.0% | |
| ATACATTACACACTGCGTGC+GGG | - | chr5_2:5094853-5094872 | None:intergenic | 45.0% | |
| AGCTGGGAAATCTAGCAAAG+TGG | - | chr5_2:5094934-5094953 | None:intergenic | 45.0% | |
| ! | TGAGAGCAAAGCACCATCTA+AGG | - | chr5_2:5095243-5095262 | None:intergenic | 45.0% |
| GATGGTGCTTTGCTCTCAAT+AGG | + | chr5_2:5095245-5095264 | Msa0751630:CDS | 45.0% | |
| GAGAAGATGATGTGGAGTGT+TGG | - | chr5_2:5095834-5095853 | None:intergenic | 45.0% | |
| GACGCGTGTTGGAATTTGAT+TGG | - | chr5_2:5096310-5096329 | None:intergenic | 45.0% | |
| GAAGATTCCTTGACTGTTGG+GGG | - | chr5_2:5096332-5096351 | None:intergenic | 45.0% | |
| GCCATTAAACTACCACTGCA+AGG | + | chr5_2:5096507-5096526 | Msa0751630:intron | 45.0% | |
| GCCTTGCAGTGGTAGTTTAA+TGG | - | chr5_2:5096511-5096530 | None:intergenic | 45.0% | |
| !! | CTCCTTAACTTGTGCCCTTA+GGG | + | chr5_2:5096732-5096751 | Msa0751630:intron | 45.0% |
| TTGTTGGACACAAAGCCCTT+TGG | + | chr5_2:5096882-5096901 | Msa0751630:CDS | 45.0% | |
| ATAGGATGGTGAAGAAGAGC+AGG | - | chr5_2:5097086-5097105 | None:intergenic | 45.0% | |
| AGGAGAAGGTTCTACTGCAA+GGG | + | chr5_2:5097234-5097253 | Msa0751630:CDS | 45.0% | |
| CTACTGCAAGGGAACTTCTT+AGG | + | chr5_2:5097245-5097264 | Msa0751630:CDS | 45.0% | |
| TGATGTTTGATGGAAGCAGG+AGG | + | chr5_2:5097375-5097394 | Msa0751630:intron | 45.0% | |
| TGTTACAGGGCTGAACTAGA+AGG | + | chr5_2:5097554-5097573 | Msa0751630:intron | 45.0% | |
| TTGGCTGATCCAATAGAAGG+AGG | + | chr5_2:5097611-5097630 | Msa0751630:CDS | 45.0% | |
| TAGCAAGGACCTCCTTCTAT+TGG | - | chr5_2:5097623-5097642 | None:intergenic | 45.0% | |
| GGAATATTTGTGACACAGGC+AGG | + | chr5_2:5097701-5097720 | Msa0751630:CDS | 45.0% | |
| ACAGGCTTCAGATTCTCCAT+TGG | + | chr5_2:5098041-5098060 | Msa0751630:intron | 45.0% | |
| TCTTCAGCACTAAGGTCCAA+TGG | - | chr5_2:5098060-5098079 | None:intergenic | 45.0% | |
| GGAGCAGCTAGGTTCATATA+TGG | + | chr5_2:5098308-5098327 | Msa0751630:CDS | 45.0% | |
| ! | GGTGAAAGTACAAGCCAAAG+GGG | - | chr5_2:5098486-5098505 | None:intergenic | 45.0% |
| ! | GTGGTGAAAGTACAAGCCAA+AGG | - | chr5_2:5098488-5098507 | None:intergenic | 45.0% |
| TTGGTCGCCAAACCAAACAT+TGG | - | chr5_2:5098743-5098762 | None:intergenic | 45.0% | |
| AGATACGGTCCTAACTAGGG+AGG | + | chr5_2:5094805-5094824 | Msa0751630:five_prime_UTR | 50.0% | |
| GATACGGTCCTAACTAGGGA+GGG | + | chr5_2:5094806-5094825 | Msa0751630:five_prime_UTR | 50.0% | |
| !! | GCTCCTTAACTTGTGCCCTT+AGG | + | chr5_2:5096731-5096750 | Msa0751630:intron | 50.0% |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | - | chr5_2:5096737-5096756 | None:intergenic | 50.0% |
| GACTGCAGCATCTTGCATAC+AGG | + | chr5_2:5096834-5096853 | Msa0751630:intron | 50.0% | |
| GAGGAGAAGGTTCTACTGCA+AGG | + | chr5_2:5097233-5097252 | Msa0751630:CDS | 50.0% | |
| TGTTTGATGGAAGCAGGAGG+TGG | + | chr5_2:5097378-5097397 | Msa0751630:intron | 50.0% | |
| CGACTTCAAGTCTCGAGTCA+TGG | - | chr5_2:5097447-5097466 | None:intergenic | 50.0% | |
| AAGTCGTCATCAATGACGCG+AGG | + | chr5_2:5097461-5097480 | Msa0751630:CDS | 50.0% | |
| GTGTGGCTGAATATTCCAGC+AGG | - | chr5_2:5097728-5097747 | None:intergenic | 50.0% | |
| TGATATTTGGGGATGGGTCC+TGG | + | chr5_2:5097922-5097941 | Msa0751630:CDS | 50.0% | |
| CTGAAGCCTGTTATAGGCCA+AGG | - | chr5_2:5098032-5098051 | None:intergenic | 50.0% | |
| TATACACAGAGGGAGCAGCT+AGG | + | chr5_2:5098297-5098316 | Msa0751630:CDS | 50.0% | |
| GGCGCGTAAATGACAGAGGA+CGG | - | chr5_2:5096363-5096382 | None:intergenic | 55.0% | |
| ACAGGGCGCGTAAATGACAG+AGG | - | chr5_2:5096367-5096386 | None:intergenic | 55.0% | |
| ! | CTGTCATTTACGCGCCCTGT+CGG | + | chr5_2:5096367-5096386 | Msa0751630:intron | 55.0% |
| !! | GTGTAATACAGGCGCCGACA+GGG | - | chr5_2:5096384-5096403 | None:intergenic | 55.0% |
| !! | AGTGTAATACAGGCGCCGAC+AGG | - | chr5_2:5096385-5096404 | None:intergenic | 55.0% |
| ACCACTCAAATTGCGACGCG+TGG | + | chr5_2:5096417-5096436 | Msa0751630:intron | 55.0% | |
| GGACACAAAGCCCTTTGGCA+AGG | + | chr5_2:5096887-5096906 | Msa0751630:CDS | 55.0% | |
| GCCACGCGTCGCAATTTGAG+TGG | - | chr5_2:5096421-5096440 | None:intergenic | 60.0% | |
| GACTGTTGGGGGACGCGTGT+TGG | - | chr5_2:5096321-5096340 | None:intergenic | 65.0% | |
| CACGCGTCCCCCAACAGTCA+AGG | + | chr5_2:5096322-5096341 | Msa0751630:intron | 65.0% | |
| GTGACACAGGCAGGGCCTGC+TGG | + | chr5_2:5097710-5097729 | Msa0751630:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 5094796 | 5098772 | 5094796 | ID=Msa0751630;Name=Msa0751630 |
| chr5_2 | mRNA | 5094796 | 5098772 | 5094796 | ID=Msa0751630-mRNA-1;Parent=Msa0751630;Name=Msa0751630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=316|1|1|1|1|1|9|423|336 |
| chr5_2 | exon | 5094796 | 5095266 | 5094796 | ID=Msa0751630-mRNA-1:exon:2055;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5096842 | 5096908 | 5096842 | ID=Msa0751630-mRNA-1:exon:2056;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5097011 | 5097105 | 5097011 | ID=Msa0751630-mRNA-1:exon:2057;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5097207 | 5097309 | 5097207 | ID=Msa0751630-mRNA-1:exon:2058;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5097394 | 5097482 | 5097394 | ID=Msa0751630-mRNA-1:exon:2059;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5097562 | 5097794 | 5097562 | ID=Msa0751630-mRNA-1:exon:2060;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5097885 | 5097943 | 5097885 | ID=Msa0751630-mRNA-1:exon:2061;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5098045 | 5098181 | 5098045 | ID=Msa0751630-mRNA-1:exon:2062;Parent=Msa0751630-mRNA-1 |
| chr5_2 | exon | 5098277 | 5098772 | 5098277 | ID=Msa0751630-mRNA-1:exon:2063;Parent=Msa0751630-mRNA-1 |
| chr5_2 | five_prime_UTR | 5094796 | 5095111 | 5094796 | ID=Msa0751630-mRNA-1:five_prime_utr;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5095112 | 5095266 | 5095112 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5096842 | 5096908 | 5096842 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5097011 | 5097105 | 5097011 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5097207 | 5097309 | 5097207 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5097394 | 5097482 | 5097394 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5097562 | 5097794 | 5097562 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5097885 | 5097943 | 5097885 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5098045 | 5098181 | 5098045 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | CDS | 5098277 | 5098349 | 5098277 | ID=Msa0751630-mRNA-1:cds;Parent=Msa0751630-mRNA-1 |
| chr5_2 | three_prime_UTR | 5098350 | 5098772 | 5098350 | ID=Msa0751630-mRNA-1:three_prime_utr;Parent=Msa0751630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
