AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0283330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283330 MtrunA17_Chr2g0298801 96.928 1009 28 3 1 1006 1 1009 0.0 2018
Msa0283330 MtrunA17_Chr4g0071701 52.276 637 214 20 397 1006 247 820 0.0 549
Msa0283330 MtrunA17_Chr4g0071701 62.097 248 54 8 1 212 1 244 3.13e-67 241
Msa0283330 MtrunA17_Chr4g0073021 30.712 1081 549 42 1 964 1 998 3.45e-113 374
Msa0283330 MtrunA17_Chr1g0197121 40.607 527 252 17 1 500 1 493 1.47e-103 343
Msa0283330 MtrunA17_Chr1g0177421 40.797 527 238 17 1 500 1 480 6.69e-101 335
Msa0283330 MtrunA17_Chr5g0430201 26.738 1021 530 43 1 863 1 961 7.60e-44 173
Msa0283330 MtrunA17_Chr3g0105051 30.686 554 280 23 1 498 1 506 9.66e-36 147
Msa0283330 MtrunA17_Chr3g0113631 33.094 417 218 14 1 397 1 376 3.15e-34 142
Msa0283330 MtrunA17_Chr4g0061371 30.469 256 143 9 26 280 20 241 5.25e-18 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0283330 AT4G29920.2 42.318 1087 469 39 1 1000 1 1016 0.0 664
Msa0283330 AT4G29920.1 42.134 1087 468 39 1 1000 1 1013 0.0 657
Msa0283330 AT5G57130.1 41.727 1112 454 47 1 1003 1 1027 0.0 632
Msa0283330 AT3G52490.1 40.812 517 235 14 1 496 1 467 9.37e-105 346
Msa0283330 AT5G57710.1 33.414 829 415 30 1 758 1 763 2.21e-101 341
Msa0283330 AT4G30350.1 38.148 540 256 17 1 498 1 504 3.93e-79 278
Msa0283330 AT2G29970.1 27.014 1055 584 45 1 962 1 962 3.80e-55 208
Msa0283330 AT1G07200.2 27.189 868 458 34 1 779 1 783 3.48e-46 180
Msa0283330 AT2G40130.1 31.655 417 232 16 1 397 1 384 5.53e-41 164
Msa0283330 AT2G40130.2 31.655 417 232 16 1 397 1 384 6.65e-41 163
Msa0283330 AT1G74310.1 27.344 256 151 9 26 280 20 241 2.05e-15 81.6
Msa0283330 AT1G74310.2 27.344 256 151 9 26 280 20 241 2.57e-15 81.3

Find 162 sgRNAs with CRISPR-Local

Find 255 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATTGTTAACTACTTAA+TGG 0.116030 2_3:+20445029 Msa0283330:CDS
ATAATTCATCATACCCTTAT+TGG 0.138198 2_3:+20443585 Msa0283330:CDS
AAAATGGGATAGTGGGTTTA+TGG 0.183846 2_3:+20444984 Msa0283330:CDS
CTTGTCAAATCACTTGAAAT+TGG 0.210696 2_3:-20444631 None:intergenic
CTACCTTGGTTTGGCCAATA+AGG 0.218068 2_3:-20443599 None:intergenic
AGCACATTCCTTTGATGATT+TGG 0.220493 2_3:-20443993 None:intergenic
CAATGAAAAGTTTGTTGTTT+TGG 0.224683 2_3:+20444183 Msa0283330:CDS
GATATTGAACTTGGTGTATC+TGG 0.233918 2_3:-20443632 None:intergenic
CCATTAAGTAGTTAACAATT+TGG 0.247388 2_3:-20445029 None:intergenic
TAAGGGTATGATGAATTATA+AGG 0.279485 2_3:-20443581 None:intergenic
ATTGCAAAGTTTGGAACTTT+AGG 0.282514 2_3:+20444265 Msa0283330:CDS
ACAAGTTTAGAGAGGGTTAA+TGG 0.285676 2_3:+20444907 Msa0283330:CDS
AGAAGAATCTGTTGCCTTCA+TGG 0.287597 2_3:+20442980 Msa0283330:CDS
CTTGGAGTTGGATTCTCTTA+AGG 0.288171 2_3:+20443787 Msa0283330:CDS
TTCTTTGAAGTATATGAAAA+AGG 0.292144 2_3:+20441462 Msa0283330:CDS
CCTGTTCCATCTGGTGGACT+TGG 0.302111 2_3:+20441784 Msa0283330:CDS
TATAGTTTATACACTTTGTT+GGG 0.306813 2_3:+20444945 Msa0283330:CDS
GAAATCTTCTGAGTCTAATA+AGG 0.315204 2_3:+20441255 Msa0283330:CDS
GATTATGTTGTGGAAGAAAT+AGG 0.322451 2_3:+20441631 Msa0283330:CDS
GTCATTTCCTTGTTCTTAGC+TGG 0.323821 2_3:-20444730 None:intergenic
TCATCAAAATCACCTTGTTT+AGG 0.334064 2_3:+20444424 Msa0283330:CDS
TTGGAGTTGGATTCTCTTAA+GGG 0.334465 2_3:+20443788 Msa0283330:CDS
GGAACAAGAATGGTAAGATT+TGG 0.338899 2_3:+20441674 Msa0283330:CDS
GTTAGTGATTATGTTGCATT+AGG 0.341264 2_3:+20441526 Msa0283330:CDS
ATGTTTGAGAAATGGCTAAA+AGG 0.352149 2_3:+20444874 Msa0283330:CDS
GATAAGGTGATAGAGGAAAT+TGG 0.356476 2_3:+20444823 Msa0283330:CDS
CTAACAACATGTTTGAGAAA+TGG 0.359340 2_3:+20444866 Msa0283330:CDS
AGTAGAGTTATGAGAGAAGC+TGG 0.362568 2_3:+20441058 Msa0283330:CDS
GTGGTTGCTGCTGCTGTTGT+TGG 0.363016 2_3:-20440973 None:intergenic
AAATGGGATAGTGGGTTTAT+GGG 0.369377 2_3:+20444985 Msa0283330:CDS
GGCAACAGATTCTTCTGGTC+TGG 0.371234 2_3:-20442973 None:intergenic
TACCTTGGTTTGGCCAATAA+GGG 0.372431 2_3:-20443598 None:intergenic
TTGGTTGAAAATGCTGATTT+TGG 0.372782 2_3:+20444202 Msa0283330:CDS
AGATGTAAAATGCAAGTAAT+AGG 0.372867 2_3:+20445094 Msa0283330:three_prime_UTR
GAATTTGAGATTGCAAAGTT+TGG 0.378824 2_3:+20444256 Msa0283330:CDS
GTTTGAGCTATAAGCTGGTT+TGG 0.382997 2_3:-20443672 None:intergenic
CAAGCTGTTCCTGTTCCATC+TGG 0.386300 2_3:+20441775 Msa0283330:CDS
GCAATTGCAGAATCAGTGTT+TGG 0.389107 2_3:+20444070 Msa0283330:CDS
ACTCCAAGGTTGTTGTTACT+TGG 0.405028 2_3:-20443772 None:intergenic
CGCGACGGAATCGAGGTATA+AGG 0.415499 2_3:-20443694 None:intergenic
TGCAAGGAAATGATTCTGTT+GGG 0.420831 2_3:+20444029 Msa0283330:CDS
GACTCAGAAGATTTCAAGAA+AGG 0.424730 2_3:-20441247 None:intergenic
GGAAAGTTGTTTGGTGAAGA+AGG 0.427180 2_3:+20441652 Msa0283330:CDS
TCATATATATAAAGTGTTGC+AGG 0.428362 2_3:+20443913 Msa0283330:CDS
GTGGTAAAGAGGATAGAAAA+TGG 0.429390 2_3:+20444968 Msa0283330:CDS
ATTGATCATATCACTGACTT+TGG 0.429568 2_3:+20445052 Msa0283330:exon
CATCAAAGGAATGTGCTACT+TGG 0.430549 2_3:+20443999 Msa0283330:CDS
CACCATTGATTCTCAAAAGT+TGG 0.432170 2_3:-20441748 None:intergenic
TAGTTCAATAGCAGAAGCTT+TGG 0.437063 2_3:+20443964 Msa0283330:CDS
TGGAGATTTGAAGTGGATAG+TGG 0.446714 2_3:+20441570 Msa0283330:CDS
GAAGGATTCAGTGATGAAGT+TGG 0.452059 2_3:+20444342 Msa0283330:CDS
GAGGATAGAAAATGGGATAG+TGG 0.454439 2_3:+20444976 Msa0283330:CDS
GTATAGTTTATACACTTTGT+TGG 0.454781 2_3:+20444944 Msa0283330:CDS
CAAATTCTCAATTGAGTCTA+GGG 0.457600 2_3:-20444689 None:intergenic
GTTGGATTCTCTTAAGGGTA+TGG 0.458957 2_3:+20443793 Msa0283330:CDS
AACAGAAGGGTCATCAAGAA+TGG 0.461745 2_3:-20441035 None:intergenic
GTGATAGAGGAAATTGGTGT+AGG 0.463249 2_3:+20444829 Msa0283330:CDS
CACTGACTTTGGTTAGTAGT+GGG 0.465490 2_3:+20445063 Msa0283330:three_prime_UTR
TTGCAAGGAAATGATTCTGT+TGG 0.465938 2_3:+20444028 Msa0283330:CDS
TGTACAAGATAAGGTGATAG+AGG 0.466717 2_3:+20444816 Msa0283330:CDS
AAGATACTACTACCTTGGTT+TGG 0.466919 2_3:-20443608 None:intergenic
ATTGACAATACTGCCACCAT+TGG 0.472037 2_3:-20444308 None:intergenic
AAAATTTAGTGTACAAGATA+AGG 0.472610 2_3:+20444807 Msa0283330:CDS
ACAAATTCTCAATTGAGTCT+AGG 0.473106 2_3:-20444690 None:intergenic
GATGGTGATAACTCAAAAGT+TGG 0.473844 2_3:-20444394 None:intergenic
TTTGAGGTTGTTTGTTCTGG+TGG 0.473926 2_3:-20443517 None:intergenic
TCAAAACCCATCTCCTATGC+TGG 0.480572 2_3:+20442855 Msa0283330:CDS
CTGGCAAGATACTACTACCT+TGG 0.481842 2_3:-20443613 None:intergenic
AAGGGTATGATGAATTATAA+GGG 0.483177 2_3:-20443580 None:intergenic
ATCATTGAAGCTGAACTCAA+TGG 0.484131 2_3:-20443732 None:intergenic
AAAGGTGAAGTAGTAGTAGT+TGG 0.486118 2_3:-20440854 None:intergenic
ATAAGGTTTGAGCTATAAGC+TGG 0.487817 2_3:-20443677 None:intergenic
ATGAAGGCAACAGATTCTTC+TGG 0.489093 2_3:-20442978 None:intergenic
GCTGTTCCTGTTCCATCTGG+TGG 0.490790 2_3:+20441778 Msa0283330:CDS
AACTATGATTGTTGCTCCAA+TGG 0.491661 2_3:-20443541 None:intergenic
CCAAGGATTGAAGAAAATGA+AGG 0.493746 2_3:+20444493 Msa0283330:CDS
GAGCTCAAGCTCATCAAAGA+AGG 0.494543 2_3:+20440933 Msa0283330:CDS
GTTTGAGTCTTCATTCATCA+AGG 0.497632 2_3:+20441806 Msa0283330:CDS
AGGATAGAAAATGGGATAGT+GGG 0.497966 2_3:+20444977 Msa0283330:CDS
GATTTGACAAGAGAAACATT+AGG 0.500539 2_3:+20444643 Msa0283330:CDS
ATGTTATTAGAGTGTTGAAA+AGG 0.506322 2_3:+20441500 Msa0283330:CDS
GAAAGTTGTTTGGTGAAGAA+GGG 0.506532 2_3:+20441653 Msa0283330:CDS
TCAACTTTAACACTCAAAAG+TGG 0.507140 2_3:-20440992 None:intergenic
ATAAGGGTAGATCTTTGCAT+TGG 0.508400 2_3:-20443564 None:intergenic
ATTAGAAGTTACACAAAAGA+AGG 0.509570 2_3:-20445119 None:intergenic
CCAAGTCCACCAGATGGAAC+AGG 0.510866 2_3:-20441784 None:intergenic
TCAATCTTGAAGCACTCTCT+AGG 0.512470 2_3:+20440656 Msa0283330:CDS
GGTTGATTCCAAATCATCAA+AGG 0.514321 2_3:+20443985 Msa0283330:CDS
TGGTAAAGAGGATAGAAAAT+GGG 0.517397 2_3:+20444969 Msa0283330:CDS
AGTAACAACAACCTTGGAGT+TGG 0.517705 2_3:+20443775 Msa0283330:CDS
TCACTGACTTTGGTTAGTAG+TGG 0.518331 2_3:+20445062 Msa0283330:three_prime_UTR
TTGATTCCAGCATAGGAGAT+GGG 0.522179 2_3:-20442861 None:intergenic
ACTTTGTTGGGGTGGTAAAG+AGG 0.524368 2_3:+20444957 Msa0283330:CDS
GAGGAAATTGGTGTAGGGTG+TGG 0.525237 2_3:+20444835 Msa0283330:CDS
AGAAGATGAAGACTATGATG+AGG 0.527194 2_3:+20444597 Msa0283330:CDS
GATACAGTTTCTTTAACTGA+AGG 0.527453 2_3:+20441343 Msa0283330:CDS
CTGACTTTGGTTAGTAGTGG+GGG 0.527571 2_3:+20445065 Msa0283330:three_prime_UTR
TTTGATTCCAGCATAGGAGA+TGG 0.528413 2_3:-20442862 None:intergenic
GTTACATGAGGTGTCAAATG+AGG 0.528631 2_3:+20441722 Msa0283330:CDS
TGGATAGTGGATGATAATGA+TGG 0.530923 2_3:+20441583 Msa0283330:CDS
TATTAGAGTGTTGAAAAGGA+AGG 0.532303 2_3:+20441504 Msa0283330:CDS
GCATTTCTTAAAGAAGAAGA+TGG 0.533196 2_3:-20440746 None:intergenic
GAAGATGAAGACTATGATGA+GGG 0.534488 2_3:+20444598 Msa0283330:CDS
GAAGAAATAGGAAAGTTGTT+TGG 0.534540 2_3:+20441643 Msa0283330:CDS
CTTGGAAATTCAACATTCAG+TGG 0.534821 2_3:+20443848 Msa0283330:CDS
GACAAAGATGTTTATGTCAA+GGG 0.535057 2_3:+20444750 Msa0283330:CDS
GTTTATACACTTTGTTGGGG+TGG 0.536531 2_3:+20444949 Msa0283330:CDS
GTTTAGAGAGGGTTAATGGT+GGG 0.538900 2_3:+20444911 Msa0283330:CDS
TGACAAAGATGTTTATGTCA+AGG 0.539341 2_3:+20444749 Msa0283330:CDS
GATTATGTTGCATTAGGTGT+TGG 0.539481 2_3:+20441532 Msa0283330:CDS
GGTGAAGAAGGGAACAAGAA+TGG 0.542309 2_3:+20441664 Msa0283330:CDS
AGCTCAAGCTCATCAAAGAA+GGG 0.544619 2_3:+20440934 Msa0283330:CDS
CTCATAACTCTACTAACAGA+AGG 0.547154 2_3:-20441049 None:intergenic
ACAAACAACCTCAAAACCAT+TGG 0.547893 2_3:+20443525 Msa0283330:CDS
TAGCAAATTGTAATGCGCTC+AGG 0.548048 2_3:+20440593 None:intergenic
ATAATGAAAAGATTTGAAAG+AGG 0.551174 2_3:+20441379 Msa0283330:CDS
GTAAAGACAACTCTTGCACT+TGG 0.555155 2_3:+20443830 Msa0283330:CDS
TCAACAAAAGATATTGAACT+TGG 0.555816 2_3:-20443641 None:intergenic
GATTCTCTTAAGGGTATGGA+AGG 0.560727 2_3:+20443797 Msa0283330:CDS
ATTTGAAAGAGGTGAAGTAC+CGG 0.561365 2_3:+20441390 Msa0283330:CDS
AAACCAAGTAACAACAACCT+TGG 0.563498 2_3:+20443769 Msa0283330:CDS
TTAGAGAGGGTTAATGGTGG+GGG 0.564593 2_3:+20444913 Msa0283330:CDS
ACTGACTTTGGTTAGTAGTG+GGG 0.567654 2_3:+20445064 Msa0283330:three_prime_UTR
CTAACTGTTTCACATTGCCA+TGG 0.568665 2_3:-20443944 None:intergenic
TGATAGAGGAAATTGGTGTA+GGG 0.570147 2_3:+20444830 Msa0283330:CDS
CTTCAAGATTGAAGCAGCCT+CGG 0.571682 2_3:-20440645 None:intergenic
CAAGGATTGAAGAAAATGAA+GGG 0.573650 2_3:+20444494 Msa0283330:CDS
AGTGTAGCAGCAACGTGAAG+AGG 0.575327 2_3:-20440713 None:intergenic
TTTAGAGAGGGTTAATGGTG+GGG 0.579670 2_3:+20444912 Msa0283330:CDS
TGTCAATGAAGATCAGAAGA+AGG 0.579932 2_3:+20444324 Msa0283330:CDS
TGTTGTCCGCGACGGAATCG+AGG 0.580825 2_3:-20443701 None:intergenic
AAAATATTCATATTGTCCAA+TGG 0.583934 2_3:+20444292 Msa0283330:CDS
TCTATGTTGGAGATTTGAAG+TGG 0.587362 2_3:+20441563 Msa0283330:CDS
TGAACTTGACTTGTTTAGCA+AGG 0.587561 2_3:+20444462 Msa0283330:CDS
ATAGTTTATACACTTTGTTG+GGG 0.593962 2_3:+20444946 Msa0283330:CDS
GGTAAAAGAGTCATTTGAGG+AGG 0.594837 2_3:+20444771 Msa0283330:CDS
TCAAGAGCTCTACATTGAAG+AGG 0.598089 2_3:-20440800 None:intergenic
CTATGAGACTGAAGCCATGA+AGG 0.600566 2_3:-20442994 None:intergenic
ACATGCTGTGGTTGAAGCAA+AGG 0.603439 2_3:-20440872 None:intergenic
TTACATGAGGTGTCAAATGA+GGG 0.606608 2_3:+20441723 Msa0283330:CDS
AGAGATTGTTGATTATGTTG+TGG 0.609416 2_3:+20441621 Msa0283330:CDS
AGTTTAGAGAGGGTTAATGG+TGG 0.613323 2_3:+20444910 Msa0283330:CDS
CTAGGCTTAGCACGTAGAAG+AGG 0.615440 2_3:+20440674 Msa0283330:CDS
CTCAAACCAAGTCCACCAGA+TGG 0.615673 2_3:-20441790 None:intergenic
ATGAGTGCATTAGAAAGTGA+AGG 0.616666 2_3:-20440896 None:intergenic
TAGCACACAAGCACGTCAGA+AGG 0.619056 2_3:+20443014 Msa0283330:CDS
CTTAAGAGAATCCAACTCCA+AGG 0.619758 2_3:-20443786 None:intergenic
AAGGGTAAAAGAGTCATTTG+AGG 0.622133 2_3:+20444768 Msa0283330:CDS
GCTCAAGCTCATCAAAGAAG+GGG 0.624859 2_3:+20440935 Msa0283330:CDS
TCAAAGTCCAGCTAAGAACA+AGG 0.627959 2_3:+20444723 Msa0283330:CDS
AAATGGTTATGACTAAGAGA+AGG 0.639749 2_3:-20441157 None:intergenic
ATATTCATATTGTCCAATGG+TGG 0.641525 2_3:+20444295 Msa0283330:CDS
TCATAACTCTACTAACAGAA+GGG 0.643236 2_3:-20441048 None:intergenic
TACCCTTATTGGCCAAACCA+AGG 0.646502 2_3:+20443596 Msa0283330:CDS
GAAGAGGTGTGATTTGTGCA+TGG 0.654069 2_3:-20440697 None:intergenic
TGCATGATTGTTGTCCGCGA+CGG 0.659605 2_3:-20443709 None:intergenic
TGTTGCAGGAGAATGTTCCA+TGG 0.660728 2_3:+20443927 Msa0283330:CDS
CTCAAGCTCATCAAAGAAGG+GGG 0.661271 2_3:+20440936 Msa0283330:CDS
CTAGTTATCAAAGTTACATG+AGG 0.668274 2_3:+20441710 Msa0283330:CDS
GAAAGTGAAGGAACATGCTG+TGG 0.672616 2_3:-20440884 None:intergenic
GCAAGAGACACTAACAGCCG+AGG 0.683106 2_3:+20440628 Msa0283330:CDS
CTTATACCTCGATTCCGTCG+CGG 0.713335 2_3:+20443695 Msa0283330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTTTATTTTAAATA+TGG + chr2_3:20442268-20442287 Msa0283330:intron 0.0%
!! TAAAAAAAATACAAAAAAGA+GGG + chr2_3:20442198-20442217 Msa0283330:intron 10.0%
!! TAAATGATTTAAAAATGATT+TGG - chr2_3:20443190-20443209 None:intergenic 10.0%
!! ATTTATCAAAACATATATGA+AGG + chr2_3:20441909-20441928 Msa0283330:intron 15.0%
!! CTAAAAAAAATACAAAAAAG+AGG + chr2_3:20442197-20442216 Msa0283330:intron 15.0%
!! AATATCATAAAGTAAAAACA+TGG + chr2_3:20442551-20442570 Msa0283330:intron 15.0%
!! CAATAATACACAAAATATAT+CGG - chr2_3:20442740-20442759 None:intergenic 15.0%
!!! AGTGTTTATTTGTTTAATTT+TGG + chr2_3:20442773-20442792 Msa0283330:intron 15.0%
!! ATGTAATTATAATTAAGTGT+TGG - chr2_3:20443130-20443149 None:intergenic 15.0%
!!! CAATTTAATGTTTTTTTTTC+AGG + chr2_3:20443445-20443464 Msa0283330:intron 15.0%
!!! TTAACAATTTGGATATTTTT+AGG - chr2_3:20445021-20445040 None:intergenic 15.0%
!! ATAATGAAAAGATTTGAAAG+AGG + chr2_3:20441379-20441398 Msa0283330:CDS 20.0%
!!! TTCTTTGAAGTATATGAAAA+AGG + chr2_3:20441462-20441481 Msa0283330:CDS 20.0%
!!! TAAGAATAAATAGTCCTTTT+TGG + chr2_3:20441871-20441890 Msa0283330:intron 20.0%
!!! TTGTTTTTTAGTTTCAACTT+AGG + chr2_3:20441965-20441984 Msa0283330:intron 20.0%
!! GTCTTTCATTAGTAAATTTA+TGG - chr2_3:20442017-20442036 None:intergenic 20.0%
!!! TTTTGTAATTTTGATACAGT+CGG + chr2_3:20442148-20442167 Msa0283330:intron 20.0%
!!! TTAATTTGTTTTGCAATTTG+TGG + chr2_3:20442339-20442358 Msa0283330:intron 20.0%
!!! TTACTTTATGATATTGCTTT+TGG - chr2_3:20442546-20442565 None:intergenic 20.0%
!!! CGATATATTTTGTGTATTAT+TGG + chr2_3:20442738-20442757 Msa0283330:intron 20.0%
!! AAAAGTTTAACATATATGTG+TGG - chr2_3:20443166-20443185 None:intergenic 20.0%
!! ATGATTAAAATGTTTCAACT+AGG - chr2_3:20443315-20443334 None:intergenic 20.0%
!! ATCATTAGATCAAAATTAGA+CGG + chr2_3:20443330-20443349 Msa0283330:intron 20.0%
!!! TGGACAATATGAATATTTTT+TGG - chr2_3:20444291-20444310 None:intergenic 20.0%
!! AAAATATTCATATTGTCCAA+TGG + chr2_3:20444292-20444311 Msa0283330:CDS 20.0%
!! AAAATTTAGTGTACAAGATA+AGG + chr2_3:20444807-20444826 Msa0283330:CDS 20.0%
!! TATAGTTTATACACTTTGTT+GGG + chr2_3:20444945-20444964 Msa0283330:CDS 20.0%
! TCCTTCTGTTAAAAACAATT+TGG + chr2_3:20441090-20441109 Msa0283330:CDS 25.0%
!!! TCCAAATTGTTTTTAACAGA+AGG - chr2_3:20441094-20441113 None:intergenic 25.0%
!!! AACCATTTTTTGAGTTCTTA+TGG + chr2_3:20441172-20441191 Msa0283330:CDS 25.0%
! AACCATAAGAACTCAAAAAA+TGG - chr2_3:20441177-20441196 None:intergenic 25.0%
!!! TTTTTGAGTTCTTATGGTTA+TGG + chr2_3:20441178-20441197 Msa0283330:CDS 25.0%
!!! TTGTTTTTGATGTTCTTTTG+AGG + chr2_3:20441290-20441309 Msa0283330:CDS 25.0%
!!! ATGTTATTAGAGTGTTGAAA+AGG + chr2_3:20441500-20441519 Msa0283330:CDS 25.0%
!! TATAGACTAAAGTACCAAAA+AGG - chr2_3:20441888-20441907 None:intergenic 25.0%
!!! GTGTATTTTGTTACTTAGTT+TGG + chr2_3:20441931-20441950 Msa0283330:intron 25.0%
! TTACTAACAAAACACGTTTA+AGG + chr2_3:20442121-20442140 Msa0283330:intron 25.0%
! ATGATAAGTGTTTATGTGAA+AGG + chr2_3:20442316-20442335 Msa0283330:intron 25.0%
! TATTTAAGAGAATGAAACGT+TGG - chr2_3:20442606-20442625 None:intergenic 25.0%
!!! GTTTAATTTTGGATGCTAAT+TGG + chr2_3:20442784-20442803 Msa0283330:intron 25.0%
!!! ATCAAAGTTTTTCAGTAACA+AGG + chr2_3:20442879-20442898 Msa0283330:CDS 25.0%
!!! TTGAGCTTCTTTTTCATAAT+TGG - chr2_3:20442944-20442963 None:intergenic 25.0%
! TTTGTATTCTTGTACATGTT+GGG - chr2_3:20443062-20443081 None:intergenic 25.0%
!! TTTTGTATTCTTGTACATGT+TGG - chr2_3:20443063-20443082 None:intergenic 25.0%
!!! ATCTTATGTGATTTTTGACT+TGG + chr2_3:20443395-20443414 Msa0283330:intron 25.0%
!! AAGGGTATGATGAATTATAA+GGG - chr2_3:20443583-20443602 None:intergenic 25.0%
!! TAAGGGTATGATGAATTATA+AGG - chr2_3:20443584-20443603 None:intergenic 25.0%
! ATAATTCATCATACCCTTAT+TGG + chr2_3:20443585-20443604 Msa0283330:CDS 25.0%
! TCAACAAAAGATATTGAACT+TGG - chr2_3:20443644-20443663 None:intergenic 25.0%
!!! TCATATATATAAAGTGTTGC+AGG + chr2_3:20443913-20443932 Msa0283330:CDS 25.0%
!!! CAATGAAAAGTTTGTTGTTT+TGG + chr2_3:20444183-20444202 Msa0283330:CDS 25.0%
!! CTTCTTTTATTACCTAAACA+AGG - chr2_3:20444439-20444458 None:intergenic 25.0%
!!! TTTTTCAAACAAGTTTAGAG+AGG + chr2_3:20444899-20444918 Msa0283330:CDS 25.0%
!! TTTTCAAACAAGTTTAGAGA+GGG + chr2_3:20444900-20444919 Msa0283330:CDS 25.0%
! GTATAGTTTATACACTTTGT+TGG + chr2_3:20444944-20444963 Msa0283330:CDS 25.0%
! ATAGTTTATACACTTTGTTG+GGG + chr2_3:20444946-20444965 Msa0283330:CDS 25.0%
! CCATTAAGTAGTTAACAATT+TGG - chr2_3:20445032-20445051 None:intergenic 25.0%
! CCAAATTGTTAACTACTTAA+TGG + chr2_3:20445029-20445048 Msa0283330:CDS 25.0%
! AGATGTAAAATGCAAGTAAT+AGG + chr2_3:20445094-20445113 Msa0283330:three_prime_UTR 25.0%
GCATTTCTTAAAGAAGAAGA+TGG - chr2_3:20440749-20440768 None:intergenic 30.0%
TCAACTTTAACACTCAAAAG+TGG - chr2_3:20440995-20441014 None:intergenic 30.0%
TCATAACTCTACTAACAGAA+GGG - chr2_3:20441051-20441070 None:intergenic 30.0%
AAATGGTTATGACTAAGAGA+AGG - chr2_3:20441160-20441179 None:intergenic 30.0%
GAAATCTTCTGAGTCTAATA+AGG + chr2_3:20441255-20441274 Msa0283330:CDS 30.0%
AAGAAAAACACTGTGATAGT+TGG + chr2_3:20441319-20441338 Msa0283330:CDS 30.0%
GATACAGTTTCTTTAACTGA+AGG + chr2_3:20441343-20441362 Msa0283330:CDS 30.0%
!! TGAGTTGTTTTCAATTCATC+CGG - chr2_3:20441412-20441431 None:intergenic 30.0%
! ACTCATTTTGTGAAGTTTCA+TGG + chr2_3:20441427-20441446 Msa0283330:CDS 30.0%
!! TATTAGAGTGTTGAAAAGGA+AGG + chr2_3:20441504-20441523 Msa0283330:CDS 30.0%
GTTAGTGATTATGTTGCATT+AGG + chr2_3:20441526-20441545 Msa0283330:CDS 30.0%
! AGAGATTGTTGATTATGTTG+TGG + chr2_3:20441621-20441640 Msa0283330:CDS 30.0%
GATTATGTTGTGGAAGAAAT+AGG + chr2_3:20441631-20441650 Msa0283330:CDS 30.0%
GAAGAAATAGGAAAGTTGTT+TGG + chr2_3:20441643-20441662 Msa0283330:CDS 30.0%
CTAGTTATCAAAGTTACATG+AGG + chr2_3:20441710-20441729 Msa0283330:CDS 30.0%
!! TACCAACTTTTGAGAATCAA+TGG + chr2_3:20441746-20441765 Msa0283330:CDS 30.0%
AATTGTTGTCAATTGTCGTA+TGG - chr2_3:20442080-20442099 None:intergenic 30.0%
CAAAACCTCTTTAGACATTA+CGG + chr2_3:20442484-20442503 Msa0283330:intron 30.0%
! TTCACATGATGTTTTGTACA+AGG + chr2_3:20442508-20442527 Msa0283330:intron 30.0%
AAAAACTTTGATTCCAGCAT+AGG - chr2_3:20442871-20442890 None:intergenic 30.0%
!! AAAGTTTTTCAGTAACAAGG+AGG + chr2_3:20442882-20442901 Msa0283330:CDS 30.0%
ACTAGGATACGATAAATGTA+TGG - chr2_3:20443298-20443317 None:intergenic 30.0%
ATGATTCTGTTGGGAAAAAA+AGG + chr2_3:20444038-20444057 Msa0283330:CDS 30.0%
! AGTTGAAATGTTTTCTCAGA+TGG + chr2_3:20444096-20444115 Msa0283330:CDS 30.0%
! CCAACAATCTTTTCAGAAAA+GGG - chr2_3:20444151-20444170 None:intergenic 30.0%
!! CCTTTTCTGAAAAGATTGTT+GGG + chr2_3:20444149-20444168 Msa0283330:CDS 30.0%
!!! TTGGTTGAAAATGCTGATTT+TGG + chr2_3:20444202-20444221 Msa0283330:CDS 30.0%
! AGCAAGCATTTTCCTTAAAA+GGG - chr2_3:20444233-20444252 None:intergenic 30.0%
! GAATTTGAGATTGCAAAGTT+TGG + chr2_3:20444256-20444275 Msa0283330:CDS 30.0%
! ATTGCAAAGTTTGGAACTTT+AGG + chr2_3:20444265-20444284 Msa0283330:CDS 30.0%
ATATTCATATTGTCCAATGG+TGG + chr2_3:20444295-20444314 Msa0283330:CDS 30.0%
!!! GATTTTGATGATGATGAAGA+TGG - chr2_3:20444415-20444434 None:intergenic 30.0%
! TCATCAAAATCACCTTGTTT+AGG + chr2_3:20444424-20444443 Msa0283330:CDS 30.0%
TTAGCAAGGTAAAAATTCCA+AGG + chr2_3:20444476-20444495 Msa0283330:CDS 30.0%
CAAGGATTGAAGAAAATGAA+GGG + chr2_3:20444494-20444513 Msa0283330:CDS 30.0%
CTTGTCAAATCACTTGAAAT+TGG - chr2_3:20444634-20444653 None:intergenic 30.0%
GATTTGACAAGAGAAACATT+AGG + chr2_3:20444643-20444662 Msa0283330:CDS 30.0%
CAAATTCTCAATTGAGTCTA+GGG - chr2_3:20444692-20444711 None:intergenic 30.0%
ACAAATTCTCAATTGAGTCT+AGG - chr2_3:20444693-20444712 None:intergenic 30.0%
TGACAAAGATGTTTATGTCA+AGG + chr2_3:20444749-20444768 Msa0283330:CDS 30.0%
GACAAAGATGTTTATGTCAA+GGG + chr2_3:20444750-20444769 Msa0283330:CDS 30.0%
CTAACAACATGTTTGAGAAA+TGG + chr2_3:20444866-20444885 Msa0283330:CDS 30.0%
ATGTTTGAGAAATGGCTAAA+AGG + chr2_3:20444874-20444893 Msa0283330:CDS 30.0%
TGGTAAAGAGGATAGAAAAT+GGG + chr2_3:20444969-20444988 Msa0283330:CDS 30.0%
!! ATTGATCATATCACTGACTT+TGG + chr2_3:20445052-20445071 Msa0283330:exon 30.0%
AAAGGTGAAGTAGTAGTAGT+TGG - chr2_3:20440857-20440876 None:intergenic 35.0%
ATGAGTGCATTAGAAAGTGA+AGG - chr2_3:20440899-20440918 None:intergenic 35.0%
CTCATAACTCTACTAACAGA+AGG - chr2_3:20441052-20441071 None:intergenic 35.0%
GACTCAGAAGATTTCAAGAA+AGG - chr2_3:20441250-20441269 None:intergenic 35.0%
ATTTGAAAGAGGTGAAGTAC+CGG + chr2_3:20441390-20441409 Msa0283330:CDS 35.0%
GATTATGTTGCATTAGGTGT+TGG + chr2_3:20441532-20441551 Msa0283330:CDS 35.0%
!! GTTGGAGCTATTTTCTATGT+TGG + chr2_3:20441550-20441569 Msa0283330:CDS 35.0%
TCTATGTTGGAGATTTGAAG+TGG + chr2_3:20441563-20441582 Msa0283330:CDS 35.0%
!! TGGATAGTGGATGATAATGA+TGG + chr2_3:20441583-20441602 Msa0283330:CDS 35.0%
! GAAAGTTGTTTGGTGAAGAA+GGG + chr2_3:20441653-20441672 Msa0283330:CDS 35.0%
GGAACAAGAATGGTAAGATT+TGG + chr2_3:20441674-20441693 Msa0283330:CDS 35.0%
! TTACATGAGGTGTCAAATGA+GGG + chr2_3:20441723-20441742 Msa0283330:CDS 35.0%
!! CACCATTGATTCTCAAAAGT+TGG - chr2_3:20441751-20441770 None:intergenic 35.0%
GTTTGAGTCTTCATTCATCA+AGG + chr2_3:20441806-20441825 Msa0283330:CDS 35.0%
ATGTCTTCCGTGAATCATTT+CGG + chr2_3:20441990-20442009 Msa0283330:intron 35.0%
TTATGGTCCGAAATGATTCA+CGG - chr2_3:20442000-20442019 None:intergenic 35.0%
AATTTGTGGCCAAGTATGTA+CGG + chr2_3:20442353-20442372 Msa0283330:intron 35.0%
!! AAAAGCATTGTTGGTTGGTA+AGG + chr2_3:20442407-20442426 Msa0283330:intron 35.0%
CAAAACAAAGTGAAGCAGAA+AGG - chr2_3:20442454-20442473 None:intergenic 35.0%
TGAATCCGTAATGTCTAAAG+AGG - chr2_3:20442492-20442511 None:intergenic 35.0%
ACGCATTAATTAACCTAGAC+CGG - chr2_3:20443233-20443252 None:intergenic 35.0%
! TTGGCGTATGTTTGAAATAG+TGG + chr2_3:20443414-20443433 Msa0283330:intron 35.0%
!!! GTTCCACTTTTTGTTCAACT+GGG - chr2_3:20443480-20443499 None:intergenic 35.0%
!!! TGTTCCACTTTTTGTTCAAC+TGG - chr2_3:20443481-20443500 None:intergenic 35.0%
ACAAACAACCTCAAAACCAT+TGG + chr2_3:20443525-20443544 Msa0283330:CDS 35.0%
AACTATGATTGTTGCTCCAA+TGG - chr2_3:20443544-20443563 None:intergenic 35.0%
ATAAGGGTAGATCTTTGCAT+TGG - chr2_3:20443567-20443586 None:intergenic 35.0%
AAGATACTACTACCTTGGTT+TGG - chr2_3:20443611-20443630 None:intergenic 35.0%
!! GATATTGAACTTGGTGTATC+TGG - chr2_3:20443635-20443654 None:intergenic 35.0%
ATAAGGTTTGAGCTATAAGC+TGG - chr2_3:20443680-20443699 None:intergenic 35.0%
ATCATTGAAGCTGAACTCAA+TGG - chr2_3:20443735-20443754 None:intergenic 35.0%
AAACCAAGTAACAACAACCT+TGG + chr2_3:20443769-20443788 Msa0283330:CDS 35.0%
TTGGAGTTGGATTCTCTTAA+GGG + chr2_3:20443788-20443807 Msa0283330:CDS 35.0%
CTTGGAAATTCAACATTCAG+TGG + chr2_3:20443848-20443867 Msa0283330:CDS 35.0%
TGGTTCAGATCAGAAAAAGA+TGG + chr2_3:20443868-20443887 Msa0283330:CDS 35.0%
TAGTTCAATAGCAGAAGCTT+TGG + chr2_3:20443964-20443983 Msa0283330:CDS 35.0%
! GGTTGATTCCAAATCATCAA+AGG + chr2_3:20443985-20444004 Msa0283330:CDS 35.0%
! AGCACATTCCTTTGATGATT+TGG - chr2_3:20443996-20444015 None:intergenic 35.0%
TTGCAAGGAAATGATTCTGT+TGG + chr2_3:20444028-20444047 Msa0283330:CDS 35.0%
TGCAAGGAAATGATTCTGTT+GGG + chr2_3:20444029-20444048 Msa0283330:CDS 35.0%
TTCTGTTGGGAAAAAAAGGT+TGG + chr2_3:20444042-20444061 Msa0283330:CDS 35.0%
!! CCCTTTTCTGAAAAGATTGT+TGG + chr2_3:20444148-20444167 Msa0283330:CDS 35.0%
! CCCAACAATCTTTTCAGAAA+AGG - chr2_3:20444152-20444171 None:intergenic 35.0%
!! ATTTTGGTGACACCCTTTTA+AGG + chr2_3:20444218-20444237 Msa0283330:CDS 35.0%
! CAGCAAGCATTTTCCTTAAA+AGG - chr2_3:20444234-20444253 None:intergenic 35.0%
TGTCAATGAAGATCAGAAGA+AGG + chr2_3:20444324-20444343 Msa0283330:CDS 35.0%
GATGGTGATAACTCAAAAGT+TGG - chr2_3:20444397-20444416 None:intergenic 35.0%
!! TGAACTTGACTTGTTTAGCA+AGG + chr2_3:20444462-20444481 Msa0283330:CDS 35.0%
! CCTTCATTTTCTTCAATCCT+TGG - chr2_3:20444496-20444515 None:intergenic 35.0%
CCAAGGATTGAAGAAAATGA+AGG + chr2_3:20444493-20444512 Msa0283330:CDS 35.0%
AGAAGATGAAGACTATGATG+AGG + chr2_3:20444597-20444616 Msa0283330:CDS 35.0%
GAAGATGAAGACTATGATGA+GGG + chr2_3:20444598-20444617 Msa0283330:CDS 35.0%
AAGGGTAAAAGAGTCATTTG+AGG + chr2_3:20444768-20444787 Msa0283330:CDS 35.0%
! AGTCATTTGAGGAGGTTTTT+GGG + chr2_3:20444779-20444798 Msa0283330:CDS 35.0%
TGTACAAGATAAGGTGATAG+AGG + chr2_3:20444816-20444835 Msa0283330:CDS 35.0%
GATAAGGTGATAGAGGAAAT+TGG + chr2_3:20444823-20444842 Msa0283330:CDS 35.0%
TGATAGAGGAAATTGGTGTA+GGG + chr2_3:20444830-20444849 Msa0283330:CDS 35.0%
ACAAGTTTAGAGAGGGTTAA+TGG + chr2_3:20444907-20444926 Msa0283330:CDS 35.0%
GTGGTAAAGAGGATAGAAAA+TGG + chr2_3:20444968-20444987 Msa0283330:CDS 35.0%
AGGATAGAAAATGGGATAGT+GGG + chr2_3:20444977-20444996 Msa0283330:CDS 35.0%
!! AAAATGGGATAGTGGGTTTA+TGG + chr2_3:20444984-20445003 Msa0283330:CDS 35.0%
!! AAATGGGATAGTGGGTTTAT+GGG + chr2_3:20444985-20445004 Msa0283330:CDS 35.0%
! TCAATCTTGAAGCACTCTCT+AGG + chr2_3:20440656-20440675 Msa0283330:CDS 40.0%
TCAAGAGCTCTACATTGAAG+AGG - chr2_3:20440803-20440822 None:intergenic 40.0%
AGCTCAAGCTCATCAAAGAA+GGG + chr2_3:20440934-20440953 Msa0283330:CDS 40.0%
AACAGAAGGGTCATCAAGAA+TGG - chr2_3:20441038-20441057 None:intergenic 40.0%
AGTAGAGTTATGAGAGAAGC+TGG + chr2_3:20441058-20441077 Msa0283330:CDS 40.0%
! TGGAGATTTGAAGTGGATAG+TGG + chr2_3:20441570-20441589 Msa0283330:CDS 40.0%
! GGAAAGTTGTTTGGTGAAGA+AGG + chr2_3:20441652-20441671 Msa0283330:CDS 40.0%
! GTTACATGAGGTGTCAAATG+AGG + chr2_3:20441722-20441741 Msa0283330:CDS 40.0%
TCCAGAATACCGTACATACT+TGG - chr2_3:20442365-20442384 None:intergenic 40.0%
GTACGGTATTCTGGACTATA+TGG + chr2_3:20442370-20442389 Msa0283330:intron 40.0%
ATTCTGGACTATATGGCAGA+AGG + chr2_3:20442377-20442396 Msa0283330:intron 40.0%
!! CTGTGAAAAGCATTGTTGGT+TGG + chr2_3:20442402-20442421 Msa0283330:intron 40.0%
!! CATTGTTGGTTGGTAAGGTA+AGG + chr2_3:20442412-20442431 Msa0283330:intron 40.0%
TTGATTCCAGCATAGGAGAT+GGG - chr2_3:20442864-20442883 None:intergenic 40.0%
TTTGATTCCAGCATAGGAGA+TGG - chr2_3:20442865-20442884 None:intergenic 40.0%
ATGAAGGCAACAGATTCTTC+TGG - chr2_3:20442981-20443000 None:intergenic 40.0%
AGAAGAATCTGTTGCCTTCA+TGG + chr2_3:20442980-20442999 Msa0283330:CDS 40.0%
!! ACCGTTGATTTGAGATCAAC+CGG + chr2_3:20443211-20443230 Msa0283330:intron 40.0%
ACCGGTTGATCTCAAATCAA+CGG - chr2_3:20443215-20443234 None:intergenic 40.0%
TGACCCAGTTGAACAAAAAG+TGG + chr2_3:20443474-20443493 Msa0283330:CDS 40.0%
! TTTGAGGTTGTTTGTTCTGG+TGG - chr2_3:20443520-20443539 None:intergenic 40.0%
!!! GGTTTTGAGGTTGTTTGTTC+TGG - chr2_3:20443523-20443542 None:intergenic 40.0%
!! TTGTTGCTCCAATGGTTTTG+AGG - chr2_3:20443536-20443555 None:intergenic 40.0%
!! TACCTTGGTTTGGCCAATAA+GGG - chr2_3:20443601-20443620 None:intergenic 40.0%
GTTTGAGCTATAAGCTGGTT+TGG - chr2_3:20443675-20443694 None:intergenic 40.0%
! ACTCCAAGGTTGTTGTTACT+TGG - chr2_3:20443775-20443794 None:intergenic 40.0%
AGTAACAACAACCTTGGAGT+TGG + chr2_3:20443775-20443794 Msa0283330:CDS 40.0%
CTTAAGAGAATCCAACTCCA+AGG - chr2_3:20443789-20443808 None:intergenic 40.0%
CTTGGAGTTGGATTCTCTTA+AGG + chr2_3:20443787-20443806 Msa0283330:CDS 40.0%
GTTGGATTCTCTTAAGGGTA+TGG + chr2_3:20443793-20443812 Msa0283330:CDS 40.0%
! GATTCTCTTAAGGGTATGGA+AGG + chr2_3:20443797-20443816 Msa0283330:CDS 40.0%
GTAAAGACAACTCTTGCACT+TGG + chr2_3:20443830-20443849 Msa0283330:CDS 40.0%
CTAACTGTTTCACATTGCCA+TGG - chr2_3:20443947-20443966 None:intergenic 40.0%
! CATCAAAGGAATGTGCTACT+TGG + chr2_3:20443999-20444018 Msa0283330:CDS 40.0%
!!! GCTACTTGGTTGTTTTTGCA+AGG + chr2_3:20444013-20444032 Msa0283330:CDS 40.0%
GCAATTGCAGAATCAGTGTT+TGG + chr2_3:20444070-20444089 Msa0283330:CDS 40.0%
ATTGACAATACTGCCACCAT+TGG - chr2_3:20444311-20444330 None:intergenic 40.0%
GAAGGATTCAGTGATGAAGT+TGG + chr2_3:20444342-20444361 Msa0283330:CDS 40.0%
TCAAAGTCCAGCTAAGAACA+AGG + chr2_3:20444723-20444742 Msa0283330:CDS 40.0%
GTCATTTCCTTGTTCTTAGC+TGG - chr2_3:20444733-20444752 None:intergenic 40.0%
GGTAAAAGAGTCATTTGAGG+AGG + chr2_3:20444771-20444790 Msa0283330:CDS 40.0%
! GAGTCATTTGAGGAGGTTTT+TGG + chr2_3:20444778-20444797 Msa0283330:CDS 40.0%
GTGATAGAGGAAATTGGTGT+AGG + chr2_3:20444829-20444848 Msa0283330:CDS 40.0%
AGTTTAGAGAGGGTTAATGG+TGG + chr2_3:20444910-20444929 Msa0283330:CDS 40.0%
GTTTAGAGAGGGTTAATGGT+GGG + chr2_3:20444911-20444930 Msa0283330:CDS 40.0%
TTTAGAGAGGGTTAATGGTG+GGG + chr2_3:20444912-20444931 Msa0283330:CDS 40.0%
! GTTAATGGTGGGGGTAAAAA+TGG + chr2_3:20444922-20444941 Msa0283330:CDS 40.0%
GTTTATACACTTTGTTGGGG+TGG + chr2_3:20444949-20444968 Msa0283330:CDS 40.0%
GAGGATAGAAAATGGGATAG+TGG + chr2_3:20444976-20444995 Msa0283330:CDS 40.0%
!! TCACTGACTTTGGTTAGTAG+TGG + chr2_3:20445062-20445081 Msa0283330:three_prime_UTR 40.0%
!! CACTGACTTTGGTTAGTAGT+GGG + chr2_3:20445063-20445082 Msa0283330:three_prime_UTR 40.0%
! ACTGACTTTGGTTAGTAGTG+GGG + chr2_3:20445064-20445083 Msa0283330:three_prime_UTR 40.0%
CTTCAAGATTGAAGCAGCCT+CGG - chr2_3:20440648-20440667 None:intergenic 45.0%
! GAAGAGGTGTGATTTGTGCA+TGG - chr2_3:20440700-20440719 None:intergenic 45.0%
ACATGCTGTGGTTGAAGCAA+AGG - chr2_3:20440875-20440894 None:intergenic 45.0%
GAAAGTGAAGGAACATGCTG+TGG - chr2_3:20440887-20440906 None:intergenic 45.0%
GAGCTCAAGCTCATCAAAGA+AGG + chr2_3:20440933-20440952 Msa0283330:CDS 45.0%
GCTCAAGCTCATCAAAGAAG+GGG + chr2_3:20440935-20440954 Msa0283330:CDS 45.0%
CTCAAGCTCATCAAAGAAGG+GGG + chr2_3:20440936-20440955 Msa0283330:CDS 45.0%
GGTGAAGAAGGGAACAAGAA+TGG + chr2_3:20441664-20441683 Msa0283330:CDS 45.0%
GCCAAGTATGTACGGTATTC+TGG + chr2_3:20442361-20442380 Msa0283330:intron 45.0%
!! GGCACTGTGAAAAGCATTGT+TGG + chr2_3:20442398-20442417 Msa0283330:intron 45.0%
TCAAAACCCATCTCCTATGC+TGG + chr2_3:20442855-20442874 Msa0283330:CDS 45.0%
CTATGAGACTGAAGCCATGA+AGG - chr2_3:20442997-20443016 None:intergenic 45.0%
! GATTTGAGATCAACCGGTCT+AGG + chr2_3:20443217-20443236 Msa0283330:intron 45.0%
TACCCTTATTGGCCAAACCA+AGG + chr2_3:20443596-20443615 Msa0283330:CDS 45.0%
!! CTACCTTGGTTTGGCCAATA+AGG - chr2_3:20443602-20443621 None:intergenic 45.0%
CTGGCAAGATACTACTACCT+TGG - chr2_3:20443616-20443635 None:intergenic 45.0%
TGTTGCAGGAGAATGTTCCA+TGG + chr2_3:20443927-20443946 Msa0283330:CDS 45.0%
TTAGAGAGGGTTAATGGTGG+GGG + chr2_3:20444913-20444932 Msa0283330:CDS 45.0%
ACTTTGTTGGGGTGGTAAAG+AGG + chr2_3:20444957-20444976 Msa0283330:CDS 45.0%
CTGACTTTGGTTAGTAGTGG+GGG + chr2_3:20445065-20445084 Msa0283330:three_prime_UTR 45.0%
CTAGGCTTAGCACGTAGAAG+AGG + chr2_3:20440674-20440693 Msa0283330:CDS 50.0%
AGTGTAGCAGCAACGTGAAG+AGG - chr2_3:20440716-20440735 None:intergenic 50.0%
CAAGCTGTTCCTGTTCCATC+TGG + chr2_3:20441775-20441794 Msa0283330:CDS 50.0%
CTCAAACCAAGTCCACCAGA+TGG - chr2_3:20441793-20441812 None:intergenic 50.0%
GGCAACAGATTCTTCTGGTC+TGG - chr2_3:20442976-20442995 None:intergenic 50.0%
TAGCACACAAGCACGTCAGA+AGG + chr2_3:20443014-20443033 Msa0283330:CDS 50.0%
CTTATACCTCGATTCCGTCG+CGG + chr2_3:20443695-20443714 Msa0283330:CDS 50.0%
TGCATGATTGTTGTCCGCGA+CGG - chr2_3:20443712-20443731 None:intergenic 50.0%
GAGGAAATTGGTGTAGGGTG+TGG + chr2_3:20444835-20444854 Msa0283330:CDS 50.0%
! ACTTTGGTTAGTAGTGGGGG+TGG + chr2_3:20445068-20445087 Msa0283330:three_prime_UTR 50.0%
GCAAGAGACACTAACAGCCG+AGG + chr2_3:20440628-20440647 Msa0283330:CDS 55.0%
GTGGTTGCTGCTGCTGTTGT+TGG - chr2_3:20440976-20440995 None:intergenic 55.0%
GCTGTTCCTGTTCCATCTGG+TGG + chr2_3:20441778-20441797 Msa0283330:CDS 55.0%
CCAAGTCCACCAGATGGAAC+AGG - chr2_3:20441787-20441806 None:intergenic 55.0%
!! CCTGTTCCATCTGGTGGACT+TGG + chr2_3:20441784-20441803 Msa0283330:CDS 55.0%
CGCGACGGAATCGAGGTATA+AGG - chr2_3:20443697-20443716 None:intergenic 55.0%
TGTTGTCCGCGACGGAATCG+AGG - chr2_3:20443704-20443723 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 20440595 20445131 20440595 ID=Msa0283330;Name=Msa0283330
chr2_3 mRNA 20440595 20445131 20440595 ID=Msa0283330-mRNA-1;Parent=Msa0283330;Name=Msa0283330-mRNA-1;_AED=0.01;_eAED=0.01;_QI=10|1|1|1|1|1|3|75|1006
chr2_3 exon 20440595 20441827 20440595 ID=Msa0283330-mRNA-1:exon:8016;Parent=Msa0283330-mRNA-1
chr2_3 exon 20442828 20443035 20442828 ID=Msa0283330-mRNA-1:exon:8017;Parent=Msa0283330-mRNA-1
chr2_3 exon 20443467 20445131 20443467 ID=Msa0283330-mRNA-1:exon:8018;Parent=Msa0283330-mRNA-1
chr2_3 five_prime_UTR 20440595 20440604 20440595 ID=Msa0283330-mRNA-1:five_prime_utr;Parent=Msa0283330-mRNA-1
chr2_3 CDS 20440605 20441827 20440605 ID=Msa0283330-mRNA-1:cds;Parent=Msa0283330-mRNA-1
chr2_3 CDS 20442828 20443035 20442828 ID=Msa0283330-mRNA-1:cds;Parent=Msa0283330-mRNA-1
chr2_3 CDS 20443467 20445056 20443467 ID=Msa0283330-mRNA-1:cds;Parent=Msa0283330-mRNA-1
chr2_3 three_prime_UTR 20445057 20445131 20445057 ID=Msa0283330-mRNA-1:three_prime_utr;Parent=Msa0283330-mRNA-1
Gene Sequence

>Msa0283330

ATGCGCTCAGGAGCTTATACATTGCAAGAGACACTAACAGCCGAGGCTGCTTCAATCTTGAAGCACTCTCTAGGCTTAGCACGTAGAAGAGGCCATGCACAAATCACACCTCTTCACGTTGCTGCTACACTTTTGAGTTTACCATCTTCTTCTTTAAGAAATGCATGTCTCAAATCTCAACAACAAAATAATCATCCTCTTCAATGTAGAGCTCTTGAACTTTGCTTCAATGTTGCTCTTAATAGACTTCCAACTACTACTACTTCACCTTTGCTTCAACCACAGCATGTTCCTTCACTTTCTAATGCACTCATTGCTGCTCTTAAAAGAGCTCAAGCTCATCAAAGAAGGGGGTGTATTGAGCAAAACCAACAACAGCAGCAGCAACCACTTTTGAGTGTTAAAGTTGAACTTGATCAGCTTATTCTTTCCATTCTTGATGACCCTTCTGTTAGTAGAGTTATGAGAGAAGCTGGTTTTTCTAGTCCTTCTGTTAAAAACAATTTGGAAAACTCTTCAACTTTATTAAACTCTTCTGTTTTTCATTCTTCACCTTCTCTTAGTCATAACCATTTTTTGAGTTCTTATGGTTATGGTTCTGTTCTCTTTTCTTCACAGAAGAAAGAACAAGTAGTATATCATCCTTTCTTGAAATCTTCTGAGTCTAATAAGGAAGATATTAATCTTGTTTTTGATGTTCTTTTGAGGAAGAAGAAGAAAAACACTGTGATAGTTGGTGATACAGTTTCTTTAACTGAAGGACTAGTTAGTGAAATAATGAAAAGATTTGAAAGAGGTGAAGTACCGGATGAATTGAAAACAACTCATTTTGTGAAGTTTCATGGTCTTAGCTCAGTTTCTTTGAAGTATATGAAAAAGGAAGAAGTTGAAATGAATGTTATTAGAGTGTTGAAAAGGAAGGTTAGTGATTATGTTGCATTAGGTGTTGGAGCTATTTTCTATGTTGGAGATTTGAAGTGGATAGTGGATGATAATGATGGAAGTTTGAATGAAAAAGAGATTGTTGATTATGTTGTGGAAGAAATAGGAAAGTTGTTTGGTGAAGAAGGGAACAAGAATGGTAAGATTTGGCTTGTTGCAACATCTAGTTATCAAAGTTACATGAGGTGTCAAATGAGGGTACCAACTTTTGAGAATCAATGGTGTCTTCAAGCTGTTCCTGTTCCATCTGGTGGACTTGGTTTGAGTCTTCATTCATCAAGTGTGCATGATTCAAAAATGAGCATCTCTCAAAACCCATCTCCTATGCTGGAATCAAAGTTTTTCAGTAACAAGGAGGAACATGAGAAGCTTAATTGCTGTGAAGAGTGTGTCTCCAATTATGAAAAAGAAGCTCAATTGTTCAAACCAGACCAGAAGAATCTGTTGCCTTCATGGCTTCAGTCTCATAGCACACAAGCACGTCAGAAGGATGAATTGACCCAGTTGAACAAAAAGTGGAACAGATTGTGTCAATGTCTCCACCAGAACAAACAACCTCAAAACCATTGGAGCAACAATCATAGTTCCAATGCAAAGATCTACCCTTATAATTCATCATACCCTTATTGGCCAAACCAAGGTAGTAGTATCTTGCCAGATACACCAAGTTCAATATCTTTTGTTGATTCTGCAACCAAACCAGCTTATAGCTCAAACCTTATACCTCGATTCCGTCGCGGACAACAATCATGCACCATTGAGTTCAGCTTCAATGATGAAAAAGCACAGAAAAACCAAGTAACAACAACCTTGGAGTTGGATTCTCTTAAGGGTATGGAAGGTACTAAAGAAGTAAAGACAACTCTTGCACTTGGAAATTCAACATTCAGTGGTTCAGATCAGAAAAAGATGGAAAATTTAACACTGCAAAGAGATCATATATATAAAGTGTTGCAGGAGAATGTTCCATGGCAATGTGAAACAGTTAGTTCAATAGCAGAAGCTTTGGTTGATTCCAAATCATCAAAGGAATGTGCTACTTGGTTGTTTTTGCAAGGAAATGATTCTGTTGGGAAAAAAAGGTTGGCACTTGCAATTGCAGAATCAGTGTTTGGATCAGTTGAAATGTTTTCTCAGATGGATATGATGAAGAGAGAGAATGCAGAGACACCCTTTTCTGAAAAGATTGTTGGGCTATTGAAAAACAATGAAAAGTTTGTTGTTTTGGTTGAAAATGCTGATTTTGGTGACACCCTTTTAAGGAAAATGCTTGCTGATGAATTTGAGATTGCAAAGTTTGGAACTTTAGGCCAAAAAATATTCATATTGTCCAATGGTGGCAGTATTGTCAATGAAGATCAGAAGAAGGATTCAGTGATGAAGTTGGTTTTGAAGATTAGTGAAACTGAGAAAAAACCAACTTTTGAGTTATCACCATCTTCATCATCATCAAAATCACCTTGTTTAGGTAATAAAAGAAGTGCTGAACTTGACTTGTTTAGCAAGGTAAAAATTCCAAGGATTGAAGAAAATGAAGGGAACAAGAAGATAGAATTTTCATTTTCAAGACAATCAAGCTTCAACAACACTCTTGATTTGAATATGAAAGCTGATGAAGAAGAAGATGAAGACTATGATGAGGGAGAAAATAGTCCAATTTCAAGTGATTTGACAAGAGAAACATTAGGAGAACATTTGATCTCAAATGAGTCCCTAGACTCAATTGAGAATTTGTTTGAGTTCAATCAAAGTCCAGCTAAGAACAAGGAAATGACAAAGATGTTTATGTCAAGGGTAAAAGAGTCATTTGAGGAGGTTTTTGGGAATGTAAAATTTAGTGTACAAGATAAGGTGATAGAGGAAATTGGTGTAGGGTGTGGTTCTTTTACTAACAACATGTTTGAGAAATGGCTAAAAGGCATTTTTCAAACAAGTTTAGAGAGGGTTAATGGTGGGGGTAAAAATGGTATAGTTTATACACTTTGTTGGGGTGGTAAAGAGGATAGAAAATGGGATAGTGGGTTTATGGGTTCATGTTTGCCTAAAAATATCCAAATTGTTAACTACTTAATGGATTGA

Protein sequence

>Msa0283330

MRSGAYTLQETLTAEAASILKHSLGLARRRGHAQITPLHVAATLLSLPSSSLRNACLKSQQQNNHPLQCRALELCFNVALNRLPTTTTSPLLQPQHVPSLSNALIAALKRAQAHQRRGCIEQNQQQQQQPLLSVKVELDQLILSILDDPSVSRVMREAGFSSPSVKNNLENSSTLLNSSVFHSSPSLSHNHFLSSYGYGSVLFSSQKKEQVVYHPFLKSSESNKEDINLVFDVLLRKKKKNTVIVGDTVSLTEGLVSEIMKRFERGEVPDELKTTHFVKFHGLSSVSLKYMKKEEVEMNVIRVLKRKVSDYVALGVGAIFYVGDLKWIVDDNDGSLNEKEIVDYVVEEIGKLFGEEGNKNGKIWLVATSSYQSYMRCQMRVPTFENQWCLQAVPVPSGGLGLSLHSSSVHDSKMSISQNPSPMLESKFFSNKEEHEKLNCCEECVSNYEKEAQLFKPDQKNLLPSWLQSHSTQARQKDELTQLNKKWNRLCQCLHQNKQPQNHWSNNHSSNAKIYPYNSSYPYWPNQGSSILPDTPSSISFVDSATKPAYSSNLIPRFRRGQQSCTIEFSFNDEKAQKNQVTTTLELDSLKGMEGTKEVKTTLALGNSTFSGSDQKKMENLTLQRDHIYKVLQENVPWQCETVSSIAEALVDSKSSKECATWLFLQGNDSVGKKRLALAIAESVFGSVEMFSQMDMMKRENAETPFSEKIVGLLKNNEKFVVLVENADFGDTLLRKMLADEFEIAKFGTLGQKIFILSNGGSIVNEDQKKDSVMKLVLKISETEKKPTFELSPSSSSSKSPCLGNKRSAELDLFSKVKIPRIEENEGNKKIEFSFSRQSSFNNTLDLNMKADEEEDEDYDEGENSPISSDLTRETLGEHLISNESLDSIENLFEFNQSPAKNKEMTKMFMSRVKESFEEVFGNVKFSVQDKVIEEIGVGCGSFTNNMFEKWLKGIFQTSLERVNGGGKNGIVYTLCWGGKEDRKWDSGFMGSCLPKNIQIVNYLMD*