AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1322630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322630 MtrunA17_Chr8g0355251 98.639 1176 16 0 2 1177 1 1176 0.0 2410
Msa1322630 MtrunA17_Chr3g0078371 77.826 1159 233 7 22 1176 73 1211 0.0 1840
Msa1322630 MtrunA17_Chr7g0244991 58.150 1135 434 8 65 1160 137 1269 0.0 1312
Msa1322630 MtrunA17_Chr5g0415271 36.972 1136 637 20 71 1158 24 1128 0.0 711
Msa1322630 MtrunA17_Chr8g0363911 37.319 1171 650 24 53 1174 26 1161 0.0 710
Msa1322630 MtrunA17_Chr6g0450601 37.435 1146 643 23 70 1157 37 1166 0.0 691
Msa1322630 MtrunA17_Chr8g0368691 36.618 1106 636 20 87 1144 67 1155 0.0 683
Msa1322630 MtrunA17_Chr4g0062251 37.326 1077 611 20 70 1101 38 1095 0.0 682
Msa1322630 MtrunA17_Chr2g0329991 36.097 1158 645 26 70 1157 40 1172 0.0 679
Msa1322630 MtrunA17_Chr3g0091611 36.852 1118 630 24 79 1144 41 1134 0.0 663
Msa1322630 MtrunA17_Chr8g0342811 34.910 1163 654 25 70 1158 40 1173 0.0 662
Msa1322630 MtrunA17_Chr0c05g0492131 35.854 1124 651 25 70 1144 33 1135 0.0 637
Msa1322630 MtrunA17_Chr2g0324791 32.745 1133 658 24 71 1176 3 1058 1.25e-180 560
Msa1322630 MtrunA17_Chr8g0382071 22.391 527 254 17 389 900 392 778 3.11e-16 84.3
Msa1322630 MtrunA17_Chr1g0173111 23.500 400 197 14 387 768 389 697 7.02e-15 80.1
Msa1322630 MtrunA17_Chr8g0346461 25.143 350 207 10 442 767 352 670 1.59e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322630 AT5G04930.1 69.576 1157 332 7 22 1177 20 1157 0.0 1703
Msa1322630 AT3G27870.1 38.274 1147 625 26 70 1158 37 1158 0.0 715
Msa1322630 AT1G59820.1 35.780 1199 668 21 23 1176 11 1152 0.0 713
Msa1322630 AT3G13900.1 37.088 1154 638 22 71 1156 41 1174 0.0 701
Msa1322630 AT3G25610.1 37.288 1121 639 23 70 1144 39 1141 0.0 691
Msa1322630 AT1G68710.2 36.064 1123 653 20 70 1144 41 1146 0.0 687
Msa1322630 AT1G68710.1 36.064 1123 653 20 70 1144 41 1146 0.0 687
Msa1322630 AT1G54280.2 36.897 1160 634 26 71 1156 41 1176 0.0 687
Msa1322630 AT1G54280.3 36.897 1160 634 26 71 1156 41 1176 0.0 687
Msa1322630 AT1G54280.1 36.897 1160 634 26 71 1156 41 1176 0.0 687
Msa1322630 AT1G17500.2 36.594 1145 653 26 70 1161 40 1164 0.0 686
Msa1322630 AT1G17500.1 36.594 1145 653 26 70 1161 40 1164 0.0 686
Msa1322630 AT1G72700.1 36.606 1161 646 30 70 1165 40 1175 0.0 684
Msa1322630 AT1G72700.3 36.606 1161 646 30 70 1165 40 1175 0.0 684
Msa1322630 AT1G72700.2 36.606 1161 646 30 70 1165 40 1175 0.0 684
Msa1322630 AT1G26130.1 36.508 1134 629 23 70 1144 41 1142 0.0 683
Msa1322630 AT1G26130.2 36.476 1135 629 24 70 1144 41 1143 0.0 680
Msa1322630 AT1G26130.4 36.476 1135 629 24 70 1144 41 1143 0.0 680
Msa1322630 AT1G26130.3 36.476 1135 629 24 70 1144 41 1143 0.0 680
Msa1322630 AT1G68710.3 35.335 1149 652 21 70 1144 41 1172 0.0 677
Msa1322630 AT3G27870.2 40.309 970 520 19 70 1000 37 986 0.0 664
Msa1322630 AT1G13210.1 35.765 1124 655 23 70 1144 37 1142 0.0 662
Msa1322630 AT3G13900.2 38.627 932 499 17 71 945 41 956 0.0 597
Msa1322630 AT3G27870.3 37.740 991 537 23 224 1158 1 967 0.0 595
Msa1322630 AT5G44240.2 33.364 1094 651 19 71 1155 3 1027 0.0 570
Msa1322630 AT5G44240.1 33.272 1094 652 18 71 1155 35 1059 0.0 570
Msa1322630 AT3G13900.3 36.905 924 503 18 71 941 41 937 9.81e-177 547

Find 257 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATATCAATGAAGATTT+AGG 0.134302 8_4:+29777399 Msa1322630:CDS
GACTATTTCGATAGTTATTT+TGG 0.183975 8_4:+29780110 Msa1322630:CDS
AGTTTCAATGCGCTAGTATT+TGG 0.205298 8_4:+29777478 Msa1322630:CDS
CTTCTTGTATTTATAAAATT+AGG 0.206900 8_4:+29781300 Msa1322630:three_prime_UTR
TGTTCCTCTCTTTGCATATT+GGG 0.209166 8_4:+29780050 Msa1322630:CDS
ATTACCTTATTATAGGAAAT+TGG 0.214718 8_4:+29777161 Msa1322630:CDS
CTACAGAGTCCTCAGCTTTA+TGG 0.220010 8_4:+29779940 Msa1322630:CDS
TGAATCGATTACCTTATTAT+AGG 0.220322 8_4:+29777154 Msa1322630:CDS
GATTTCTCATGCATCCATTT+GGG 0.234204 8_4:+29780173 Msa1322630:CDS
GAAAAGAATGTCTGTTATAT+TGG 0.236706 8_4:+29778283 Msa1322630:CDS
GTTTCAATGCGCTAGTATTT+GGG 0.239935 8_4:+29777479 Msa1322630:CDS
GATATCCTTGTACATTTCTA+TGG 0.241630 8_4:+29777287 Msa1322630:CDS
GAGGAAAGTTATCAATATTA+TGG 0.260563 8_4:+29777201 Msa1322630:CDS
TTGTTCCTCTCTTTGCATAT+TGG 0.261562 8_4:+29780049 Msa1322630:CDS
TTGACAAGGATCTTAGTAAA+AGG 0.262036 8_4:+29779911 Msa1322630:CDS
CACTGTAGATATAGCAAGTA+TGG 0.268241 8_4:+29780077 Msa1322630:CDS
AGAAAATAACCTATGCATAT+TGG 0.269137 8_4:+29778571 Msa1322630:CDS
TAGTACTAAAACATTAATTA+AGG 0.270200 8_4:-29776000 None:intergenic
GGAAAGCCGGTATTAAAGTA+TGG 0.277372 8_4:+29778654 Msa1322630:CDS
CTATGCAGGTTCAATGTCTT+GGG 0.277909 8_4:+29778236 Msa1322630:intron
TTAACTTTCACCTTCATCTT+TGG 0.278701 8_4:-29777704 None:intergenic
TTTAGTACTAGAACAAATTA+TGG 0.286657 8_4:+29776013 Msa1322630:five_prime_UTR
AGAGAGAAAGCTTGTGAAAT+TGG 0.287115 8_4:-29775670 None:intergenic
TCTTTGTGCTAATTCTGTTT+TGG 0.290282 8_4:+29779544 Msa1322630:CDS
AATGAGAGATTTGAATTTGC+TGG 0.290963 8_4:+29776313 Msa1322630:CDS
AAATCCAATTTCCTATAATA+AGG 0.292418 8_4:-29777165 None:intergenic
AAAAGAATGTCTGTTATATT+GGG 0.301829 8_4:+29778284 Msa1322630:CDS
GGATTTCTCATGCATCCATT+TGG 0.302390 8_4:+29780172 Msa1322630:CDS
TCAACAAGGGAAGTCACTTT+TGG 0.317357 8_4:+29776160 Msa1322630:CDS
AATCTCTCATTGGTTCTATC+AGG 0.320717 8_4:-29776301 None:intergenic
TACAGAGTCCTCAGCTTTAT+GGG 0.325959 8_4:+29779941 Msa1322630:CDS
TGAATATCAATGAAGATTTA+GGG 0.327800 8_4:+29777400 Msa1322630:CDS
CAATAGGTTAGGATTGGTTT+TGG 0.334033 8_4:+29776576 Msa1322630:CDS
GATTAAGAATAGCAATTATA+AGG 0.334849 8_4:-29776426 None:intergenic
GTCATTTCATTGAGAAGAAA+TGG 0.335208 8_4:+29776605 Msa1322630:CDS
GAAAATAACCTATGCATATT+GGG 0.338089 8_4:+29778572 Msa1322630:CDS
TCGAGAAGTTTGAGAATAGA+AGG 0.341274 8_4:+29781054 Msa1322630:CDS
GGTTTGAGGACGCTTGTTAT+TGG 0.342303 8_4:+29778437 Msa1322630:CDS
GTTCAAACTCTTAATCTAGA+TGG 0.343224 8_4:+29776730 Msa1322630:CDS
AAACCGAATAGGAATATATA+TGG 0.343990 8_4:+29776844 Msa1322630:CDS
CTTCAGTTTGCGCTGCTGTT+TGG 0.350525 8_4:+29777109 Msa1322630:CDS
TGGCAAGCACGACATTATTC+TGG 0.350578 8_4:+29780928 Msa1322630:CDS
CATGAAAAGGAGAGGTTTAG+TGG 0.354836 8_4:+29776805 Msa1322630:CDS
ATAGAAATGTACAAGGATAT+CGG 0.355230 8_4:-29777285 None:intergenic
CCTATGGCGTTGATTATTGA+TGG 0.358296 8_4:+29778890 Msa1322630:CDS
TACCGTCACTTCATGGTTAC+TGG 0.358328 8_4:+29780241 Msa1322630:CDS
CAGATAAAGTTGAGAACAAT+AGG 0.358646 8_4:+29776560 Msa1322630:CDS
TCCTCGAATATTGTACTTAG+AGG 0.362052 8_4:+29776913 Msa1322630:CDS
GTTTGAGGACGCTTGTTATT+GGG 0.362402 8_4:+29778438 Msa1322630:CDS
AATCCATATATATTCCTATT+CGG 0.362404 8_4:-29776847 None:intergenic
CAACACTAGTGTTATCTTTG+TGG 0.362784 8_4:-29781119 None:intergenic
GTCGTGCAGAAGACGTTTAC+AGG 0.366456 8_4:+29778781 Msa1322630:CDS
GCTATGCAGGTTCAATGTCT+TGG 0.366620 8_4:+29778235 Msa1322630:intron
AAAGGGTAGCTTTGGAGAAA+TGG 0.374344 8_4:-29775741 None:intergenic
GTGAAAGGTGGTAGAAGAAA+AGG 0.376860 8_4:-29775759 None:intergenic
ATTTGAATTTGCTGGGAATT+CGG 0.381074 8_4:+29776321 Msa1322630:CDS
TGACGAGTAGCCAATTGATA+TGG 0.383546 8_4:-29778705 None:intergenic
TATGTCAACGCTTGTTCATC+TGG 0.387878 8_4:-29777887 None:intergenic
GAGTCCAAACCTGTGAGATA+TGG 0.388556 8_4:+29776190 Msa1322630:CDS
GATGCTATACCGTCACTTCA+TGG 0.388855 8_4:+29780234 Msa1322630:CDS
CTTATTCTTCTGTGGGTTTG+AGG 0.389069 8_4:+29778423 Msa1322630:CDS
TAAATCTTCATTGATATTCA+AGG 0.394762 8_4:-29777397 None:intergenic
CAAACCCAGAAGTTCAAATC+TGG 0.395330 8_4:-29775801 None:intergenic
TCAATTTAAGTTTCATGAAA+AGG 0.397346 8_4:+29776792 Msa1322630:CDS
AGCAAATTCAAATCTCTCAT+TGG 0.401365 8_4:-29776311 None:intergenic
TGGGGTTGGCATCAGTGGTC+AGG 0.401702 8_4:+29779383 Msa1322630:CDS
CTTCACTCTTATTCTTCTGT+GGG 0.407311 8_4:+29778416 Msa1322630:CDS
CAAGAAACTGCCATATCAAT+TGG 0.409612 8_4:+29778695 Msa1322630:CDS
TGATCCATATCTCACAGGTT+TGG 0.410264 8_4:-29776194 None:intergenic
AACTTGCTCATTCTCAAGGC+TGG 0.412722 8_4:-29777526 None:intergenic
CGGAAGCTATTGAGTCTCTA+AGG 0.413263 8_4:+29778633 Msa1322630:CDS
TCATCATCAAGAAGAAGTTC+TGG 0.413308 8_4:+29776130 Msa1322630:CDS
TGACGATAGCCGATACGTTA+TGG 0.415621 8_4:+29780007 Msa1322630:CDS
CTTAGAGACTCAATAGCTTC+CGG 0.418470 8_4:-29778632 None:intergenic
CAGAAGAATAAGAGTGAAGA+TGG 0.418864 8_4:-29778412 None:intergenic
CACATAATGATTGATATTCA+TGG 0.419762 8_4:+29777956 Msa1322630:CDS
GGAGCTTGTTCGTGTTGGTC+AGG 0.421237 8_4:+29777308 Msa1322630:CDS
GTAGAAGAAAAGGGTAGCTT+TGG 0.427448 8_4:-29775749 None:intergenic
TGCTGTTAAAGATGCATATG+AGG 0.428692 8_4:+29776519 Msa1322630:CDS
CATGTCGGTTATAGTTTACC+AGG 0.432869 8_4:+29777254 Msa1322630:CDS
CAAGTACTTCTATGATTGGT+AGG 0.433645 8_4:+29778516 Msa1322630:CDS
CAAGCTACAATGGAGGTTGA+TGG 0.433886 8_4:+29776871 Msa1322630:CDS
CAAGTTGAATACTCTCTTCA+AGG 0.436098 8_4:+29777543 Msa1322630:CDS
TTTGAGAATAGAAGGGTCAA+TGG 0.436649 8_4:+29781062 Msa1322630:CDS
AGTGGATTTGCAAGCAAAGA+TGG 0.436723 8_4:+29777752 Msa1322630:CDS
CGTCAGAATATTATTGATGT+TGG 0.436878 8_4:+29781198 Msa1322630:three_prime_UTR
ACATATGCTGCCGCTGCCTA+TGG 0.439035 8_4:+29777905 Msa1322630:CDS
CAACCCCAACATCAGCCATT+TGG 0.441854 8_4:-29779368 None:intergenic
TCTTCACTCTTATTCTTCTG+TGG 0.450704 8_4:+29778415 Msa1322630:CDS
AAAGTTGAGAACAATAGGTT+AGG 0.450930 8_4:+29776565 Msa1322630:CDS
ATGCTTCAGAATTTGATCAA+TGG 0.454118 8_4:+29778474 Msa1322630:CDS
ATTAAAGTATGGGTGTTGAC+TGG 0.454694 8_4:+29778665 Msa1322630:CDS
TTATTCTGGTTATGTTTGCT+AGG 0.459471 8_4:+29780942 Msa1322630:CDS
TGGATGTAATCAGGTGGACT+TGG 0.459902 8_4:+29780151 Msa1322630:CDS
CGATGTATCAATGATCCAAA+TGG 0.463472 8_4:+29779353 Msa1322630:CDS
AAATTCAAGGTTTCAGTGTA+GGG 0.465525 8_4:+29777374 Msa1322630:CDS
GTTCCTCTCTTTGCATATTG+GGG 0.466773 8_4:+29780051 Msa1322630:CDS
GGAGGGTAGGCAAGCTGTAA+TGG 0.466999 8_4:+29779404 Msa1322630:CDS
ATTGGGGTGCAACGACAATT+CGG 0.471910 8_4:+29778301 Msa1322630:CDS
CCTGTGAGATATGGATCAAA+GGG 0.472007 8_4:+29776199 Msa1322630:CDS
GTAGCTCCGTTGCAAAAGGC+TGG 0.475516 8_4:+29779090 Msa1322630:CDS
TGATCCAAATGGCTGATGTT+GGG 0.475834 8_4:+29779364 Msa1322630:CDS
GATAGAAAACAATGAAATCA+TGG 0.476780 8_4:-29781224 None:intergenic
ATGAGAGATTTGAATTTGCT+GGG 0.477995 8_4:+29776314 Msa1322630:CDS
GCAGCAAGTACTTCTATGAT+TGG 0.480124 8_4:+29778512 Msa1322630:CDS
TGAGAACAATAGGTTAGGAT+TGG 0.482905 8_4:+29776570 Msa1322630:CDS
TGAAAGGTGGTAGAAGAAAA+GGG 0.483991 8_4:-29775758 None:intergenic
TGGAGTTGTTTCAACTCCTA+TGG 0.484075 8_4:+29778874 Msa1322630:CDS
TTGTCTCTCTCGTAAAGAAT+AGG 0.484493 8_4:+29779115 Msa1322630:CDS
GAGGTTGGCAACTATCTTGA+AGG 0.484584 8_4:+29778842 Msa1322630:CDS
GATGTTGGGGTTGGCATCAG+TGG 0.487356 8_4:+29779378 Msa1322630:CDS
AGTCCTCAGCTTTATGGGGC+TGG 0.487402 8_4:+29779946 Msa1322630:CDS
AATTTGCTGGGAATTCGGTT+CGG 0.487604 8_4:+29776326 Msa1322630:CDS
GCTGGGAATTCGGTTCGGAC+CGG 0.489295 8_4:+29776331 Msa1322630:CDS
GGTCAATTTGCACTTGGCCA+TGG 0.490285 8_4:+29780131 Msa1322630:CDS
GACGCTTGTTATTGGGATGC+GGG 0.490460 8_4:+29778445 Msa1322630:CDS
TCCTCTAAGTACAATATTCG+AGG 0.493160 8_4:-29776914 None:intergenic
CCCTTTGATCCATATCTCAC+AGG 0.493256 8_4:-29776199 None:intergenic
TTAAAGATGCATATGAGGAT+TGG 0.494182 8_4:+29776524 Msa1322630:CDS
ATGATGAGGCAACAAATTCA+AGG 0.494420 8_4:+29777361 Msa1322630:CDS
AAGATGCATATGAGGATTGG+AGG 0.496277 8_4:+29776527 Msa1322630:CDS
ATACGATTTCTTTCTTGCAC+TGG 0.497231 8_4:+29777784 Msa1322630:CDS
AAAGTTATCAATATTATGGA+TGG 0.497507 8_4:+29777205 Msa1322630:CDS
TAGAAATGTACAAGGATATC+GGG 0.498250 8_4:-29777284 None:intergenic
ATAAAGAAGAAGAAGCAAGT+TGG 0.499266 8_4:-29775695 None:intergenic
AAAATGGCAACAACAATAGT+TGG 0.499937 8_4:-29779889 None:intergenic
AATCTATCAGCTTGACTGTA+GGG 0.500945 8_4:-29777850 None:intergenic
GGACGCTTGTTATTGGGATG+CGG 0.502399 8_4:+29778444 Msa1322630:CDS
GGTTGGCATCAGTGGTCAGG+AGG 0.503044 8_4:+29779386 Msa1322630:CDS
TCTTATTTGTACACGGACAC+TGG 0.506057 8_4:+29779469 Msa1322630:CDS
AGAATCTTTGATCATGAAGT+AGG 0.508208 8_4:-29777331 None:intergenic
CGCAACTTTCATATGTGTCA+TGG 0.509300 8_4:+29780206 Msa1322630:CDS
CAACACCCATACTTTAATAC+CGG 0.510191 8_4:-29778660 None:intergenic
TCGAGTAGCTCCGTTGCAAA+AGG 0.511123 8_4:+29779086 Msa1322630:CDS
ACTTGGCCATGGATGTAATC+AGG 0.511345 8_4:+29780142 Msa1322630:CDS
TTAAAGTATGGGTGTTGACT+GGG 0.511818 8_4:+29778666 Msa1322630:CDS
GGTCTTGAAGCCAAAGATGA+AGG 0.512614 8_4:+29777694 Msa1322630:CDS
CAAATTCAAGGTTTCAGTGT+AGG 0.513211 8_4:+29777373 Msa1322630:CDS
CCGACATGAGGAATGTGAAA+AGG 0.513314 8_4:-29777239 None:intergenic
AACGTAGCTGCGTCTGAGGT+TGG 0.513352 8_4:+29778827 Msa1322630:CDS
ATTTCTCATGCATCCATTTG+GGG 0.515709 8_4:+29780174 Msa1322630:CDS
CTTGAAATCTGAATATCGTC+GGG 0.518724 8_4:-29781026 None:intergenic
TATCTTGAAGGAAGTTCTGA+TGG 0.520260 8_4:+29778854 Msa1322630:CDS
ATGCTTATAGAGCGAACCTC+AGG 0.520554 8_4:+29777932 Msa1322630:CDS
TGATAGTGAACTTGAAGAAG+AGG 0.521242 8_4:+29778934 Msa1322630:CDS
AAAACAAAATCACAAGGAAT+CGG 0.524501 8_4:-29776673 None:intergenic
TGACAACAGCTATAAATGAA+TGG 0.524690 8_4:+29779830 Msa1322630:CDS
TGCATGAATTTGATAGTGAT+CGG 0.526715 8_4:+29778261 Msa1322630:CDS
AAGTCAAACTCAAACTATGA+TGG 0.530999 8_4:+29776054 Msa1322630:exon
TCTTGAAATCTGAATATCGT+CGG 0.531604 8_4:-29781027 None:intergenic
TTAAGTGTGAGAAACCGAAT+AGG 0.534933 8_4:+29776833 Msa1322630:CDS
TCTATGGAGCTTGTTCGTGT+TGG 0.538618 8_4:+29777303 Msa1322630:CDS
TAAACTGCAGCAAGGTGTAC+CGG 0.538892 8_4:+29778613 Msa1322630:CDS
ACCTGTGAGATATGGATCAA+AGG 0.539126 8_4:+29776198 Msa1322630:CDS
TTCCTCTCTTTGCATATTGG+GGG 0.539829 8_4:+29780052 Msa1322630:CDS
GTCAAGCTGATAGATTATCA+AGG 0.540142 8_4:+29777857 Msa1322630:CDS
ATTGAATACAGACATAATAC+AGG 0.540454 8_4:+29778379 Msa1322630:CDS
ATCTTTGAAGAATTCCCAGA+TGG 0.540629 8_4:-29776088 None:intergenic
CACTATCAAGAATATATACA+AGG 0.541563 8_4:-29778919 None:intergenic
AACTGTTCAAACAAATTCCT+AGG 0.542452 8_4:-29776379 None:intergenic
AAATGGAAGGATATTAGAGT+TGG 0.543895 8_4:+29776622 Msa1322630:CDS
AGAAGTACTTGCTGCCTCAA+AGG 0.546382 8_4:-29778504 None:intergenic
GTTGGCATCAGTGGTCAGGA+GGG 0.546555 8_4:+29779387 Msa1322630:CDS
TAGGGCTGCTTTGCTTCGCA+AGG 0.549839 8_4:+29778535 Msa1322630:CDS
ATCAAGAATATATACAAGGC+TGG 0.550049 8_4:-29778915 None:intergenic
GTGAGTCTAATTTGAAGACT+AGG 0.551484 8_4:+29776752 Msa1322630:CDS
AAGTTATCAATATTATGGAT+GGG 0.551657 8_4:+29777206 Msa1322630:CDS
GAAAGCCGGTATTAAAGTAT+GGG 0.552040 8_4:+29778655 Msa1322630:CDS
ATTCAACTTGCTCATTCTCA+AGG 0.555225 8_4:-29777530 None:intergenic
GCATCAGTGGTCAGGAGGGT+AGG 0.555914 8_4:+29779391 Msa1322630:CDS
CACTCTGACTGAGAACAAGA+TGG 0.558857 8_4:+29777455 Msa1322630:CDS
ATGATCCAAATGGCTGATGT+TGG 0.559216 8_4:+29779363 Msa1322630:CDS
CTTGTATTTATAAAATTAGG+TGG 0.559367 8_4:+29781303 Msa1322630:three_prime_UTR
TCAATATTATGGATGGGGAG+TGG 0.560880 8_4:+29777212 Msa1322630:CDS
ACTGTAGATATAGCAAGTAT+GGG 0.561451 8_4:+29780078 Msa1322630:CDS
TAATCTATCAGCTTGACTGT+AGG 0.565808 8_4:-29777851 None:intergenic
AAGAATACTAATTGTGTGGT+TGG 0.566670 8_4:+29776946 Msa1322630:CDS
TCAAGCTGATAGATTATCAA+GGG 0.569002 8_4:+29777858 Msa1322630:CDS
ATGACTCTAGCCATCGGAGA+TGG 0.569025 8_4:+29779147 Msa1322630:CDS
TTACCAACGACTAGGCTACA+TGG 0.572195 8_4:+29779494 Msa1322630:CDS
TATGCAGGTTCAATGTCTTG+GGG 0.575323 8_4:+29778237 Msa1322630:intron
GTTGGTGTTGCCGTGTATTG+TGG 0.575445 8_4:+29776964 Msa1322630:CDS
TTAAGTTTCATGAAAAGGAG+AGG 0.577127 8_4:+29776797 Msa1322630:CDS
AGTCCACCTGATTACATCCA+TGG 0.578614 8_4:-29780148 None:intergenic
ATTGAGTCTCTAAGGAAAGC+CGG 0.578620 8_4:+29778641 Msa1322630:CDS
AAATCAGTGATGAAGATGCT+AGG 0.579456 8_4:+29776260 Msa1322630:CDS
AGTTATCAATATTATGGATG+GGG 0.580201 8_4:+29777207 Msa1322630:CDS
CTCTATAAGCATAAAACCAT+AGG 0.580922 8_4:-29777921 None:intergenic
CTGTAGATATAGCAAGTATG+GGG 0.581531 8_4:+29780079 Msa1322630:CDS
TAGCTCCGTTGCAAAAGGCT+GGG 0.582525 8_4:+29779091 Msa1322630:CDS
TCAAGACGGCTCCTCTTAGA+CGG 0.582988 8_4:-29777024 None:intergenic
AACGCTTTGCCATAACGTAT+CGG 0.583942 8_4:-29780016 None:intergenic
TCTTTGAAGAATTCCCAGAT+GGG 0.584144 8_4:-29776087 None:intergenic
CAAATGGCTGATGTTGGGGT+TGG 0.584450 8_4:+29779369 Msa1322630:CDS
ACAGAGTCCTCAGCTTTATG+GGG 0.585454 8_4:+29779942 Msa1322630:CDS
GTTCCTCTCTTATTTGTACA+CGG 0.589784 8_4:+29779462 Msa1322630:CDS
ATATGGATTTCAAGCTACAA+TGG 0.591040 8_4:+29776861 Msa1322630:CDS
AGTTCATTTGTGTCTCAAGA+CGG 0.592225 8_4:-29777038 None:intergenic
TTGGACAGCAGAGAGGTCAA+TGG 0.593678 8_4:-29775651 None:intergenic
TATCAGCTTGACTGTAGGGT+CGG 0.595910 8_4:-29777846 None:intergenic
TTTCAATGCGCTAGTATTTG+GGG 0.596349 8_4:+29777480 Msa1322630:CDS
TTTCTCATGCATCCATTTGG+GGG 0.597711 8_4:+29780175 Msa1322630:CDS
CGGTAGCGCCCAATATGCAT+AGG 0.597956 8_4:-29778580 None:intergenic
TTTCATTGAGAAGAAATGGA+AGG 0.598082 8_4:+29776609 Msa1322630:CDS
CACTGGAATTACCAACGACT+AGG 0.598882 8_4:+29779486 Msa1322630:CDS
AAAGCTATGCTCAACAACTC+AGG 0.598989 8_4:+29776997 Msa1322630:CDS
AAGTACTTCTATGATTGGTA+GGG 0.600513 8_4:+29778517 Msa1322630:CDS
GATCCAAATGGCTGATGTTG+GGG 0.600913 8_4:+29779365 Msa1322630:CDS
CGTCTCACGACCACAATACA+CGG 0.601943 8_4:-29776974 None:intergenic
AAAGAATGTCTGTTATATTG+GGG 0.603285 8_4:+29778285 Msa1322630:CDS
AGGATATCGGGATCATAACC+TGG 0.604549 8_4:-29777272 None:intergenic
AAGCATAAAACCATAGGCAG+CGG 0.609256 8_4:-29777915 None:intergenic
CCATCAATAATCAACGCCAT+AGG 0.614847 8_4:-29778890 None:intergenic
CGAGAAGTTTGAGAATAGAA+GGG 0.615333 8_4:+29781055 Msa1322630:CDS
GCACCATGTAGCCTAGTCGT+TGG 0.617009 8_4:-29779497 None:intergenic
TCGGATGTGTCAACAACAAG+AGG 0.617316 8_4:-29777827 None:intergenic
CATAAAGCTGAGGACTCTGT+AGG 0.619313 8_4:-29779939 None:intergenic
ACAAGAAGAACAAAAGCCAA+TGG 0.621288 8_4:-29776493 None:intergenic
AAGCTCCATAGAAATGTACA+AGG 0.624504 8_4:-29777292 None:intergenic
TTTGGTCTCAGTGAATGGAA+AGG 0.626806 8_4:+29777673 Msa1322630:intron
GAAACAAACAACGTTGGTGT+TGG 0.631441 8_4:+29775893 Msa1322630:five_prime_UTR
AGAAGAATAAGAGTGAAGAT+GGG 0.633351 8_4:-29778411 None:intergenic
TCGTCAAAGCTACTAACAAG+CGG 0.635770 8_4:+29778722 Msa1322630:CDS
TCCGATGGCTAGAGTCATGT+CGG 0.637075 8_4:-29779142 None:intergenic
ATGCATATGAGGATTGGAGG+AGG 0.637600 8_4:+29776530 Msa1322630:CDS
GATGGAAAGAGATTGTCACT+TGG 0.637955 8_4:+29776889 Msa1322630:CDS
ATCAATCATTATGTGACCTG+AGG 0.639691 8_4:-29777948 None:intergenic
CTGCAGTTTATCTTCAATAG+CGG 0.645080 8_4:-29778600 None:intergenic
AGATACCATACCATCTCCGA+TGG 0.645447 8_4:-29779157 None:intergenic
AGATTCTAGATTGTATGATG+AGG 0.647520 8_4:+29777347 Msa1322630:CDS
TACCAGTAACCATGAAGTGA+CGG 0.649664 8_4:-29780243 None:intergenic
TGAACATAAGCAACACCGGT+AGG 0.652658 8_4:-29776712 None:intergenic
TGGATTTCAAGCTACAATGG+AGG 0.657601 8_4:+29776864 Msa1322630:CDS
CTCTCTCGTAAAGAATAGGA+CGG 0.658957 8_4:+29779119 Msa1322630:CDS
GCCGACATGACTCTAGCCAT+CGG 0.659172 8_4:+29779141 Msa1322630:CDS
TGGCCATGGATGTAATCAGG+TGG 0.664998 8_4:+29780145 Msa1322630:CDS
TTGTCGACGAGTGATCCTAC+CGG 0.666383 8_4:+29776697 Msa1322630:CDS
TGTCCAGCCCCATAAAGCTG+AGG 0.666629 8_4:-29779949 None:intergenic
TTCTGGTAGAAATTCAACAA+GGG 0.668455 8_4:+29776147 Msa1322630:CDS
TAAAGTATGGGTGTTGACTG+GGG 0.668570 8_4:+29778667 Msa1322630:CDS
TACTCGACAACAAAGAACAA+CGG 0.673269 8_4:-29779070 None:intergenic
ACTTAAGAATACTAATTGTG+TGG 0.675064 8_4:+29776942 Msa1322630:CDS
TGCAGATGTGAAGTGAAAGG+TGG 0.676711 8_4:-29775771 None:intergenic
GTTCTGGTAGAAATTCAACA+AGG 0.677278 8_4:+29776146 Msa1322630:CDS
TGTCCGTGTACAAATAAGAG+AGG 0.679867 8_4:-29779465 None:intergenic
AGTTTGAACATAAGCAACAC+CGG 0.682795 8_4:-29776716 None:intergenic
TGGGGCTGGACAAAGACAAG+AGG 0.684412 8_4:+29779960 Msa1322630:CDS
ATTGAAGATAAACTGCAGCA+AGG 0.685229 8_4:+29778605 Msa1322630:CDS
TGTTGCAGATGTGAAGTGAA+AGG 0.685702 8_4:-29775774 None:intergenic
GACAACAAAACAAAATCACA+AGG 0.688219 8_4:-29776679 None:intergenic
CAAGCTGATAGATTATCAAG+GGG 0.688461 8_4:+29777859 Msa1322630:CDS
GGTAAACTATAACCGACATG+AGG 0.690892 8_4:-29777251 None:intergenic
ATATTCATGGAGAACAACAA+AGG 0.691556 8_4:+29777969 Msa1322630:CDS
TGTGAAATTGGACAGCAGAG+AGG 0.692699 8_4:-29775658 None:intergenic
ATAAACTTTACAACAAAACG+TGG 0.694069 8_4:-29780987 None:intergenic
TGTAGATATAGCAAGTATGG+GGG 0.698937 8_4:+29780080 Msa1322630:CDS
GTGTGTGAAACAAACAACGT+TGG 0.752417 8_4:+29775887 Msa1322630:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTATTATGTTTTAAAA+TGG + chr8_4:29780402-29780421 Msa1322630:intron 10.0%
!! AAGAAAAAAGAAAAAAAAAC+TGG - chr8_4:29775835-29775854 None:intergenic 15.0%
!!! ATTAAGGTTGTTTTAAATAT+GGG - chr8_4:29775987-29776006 None:intergenic 15.0%
!!! AATTAAGGTTGTTTTAAATA+TGG - chr8_4:29775988-29776007 None:intergenic 15.0%
!! TAGTACTAAAACATTAATTA+AGG - chr8_4:29776003-29776022 None:intergenic 15.0%
!!! TTTATTTTTGTGTTGTTATT+TGG + chr8_4:29777655-29777674 Msa1322630:intron 15.0%
!!! TGTAAAGTTATTCATTTTTT+AGG + chr8_4:29781172-29781191 Msa1322630:three_prime_UTR 15.0%
!! CTTCTTGTATTTATAAAATT+AGG + chr8_4:29781300-29781319 Msa1322630:three_prime_UTR 15.0%
!!! TTTTATGTCTTTTTGATGAT+TGG + chr8_4:29775926-29775945 Msa1322630:five_prime_UTR 20.0%
!! TTTAGTACTAGAACAAATTA+TGG + chr8_4:29776013-29776032 Msa1322630:five_prime_UTR 20.0%
!!! AGTTATAAAAGAGTATTTTC+CGG - chr8_4:29776353-29776372 None:intergenic 20.0%
!! GATTAAGAATAGCAATTATA+AGG - chr8_4:29776429-29776448 None:intergenic 20.0%
!!! TCAATTTAAGTTTCATGAAA+AGG + chr8_4:29776792-29776811 Msa1322630:CDS 20.0%
!! AATCCATATATATTCCTATT+CGG - chr8_4:29776850-29776869 None:intergenic 20.0%
!! ATTACCTTATTATAGGAAAT+TGG + chr8_4:29777161-29777180 Msa1322630:CDS 20.0%
!! AAATCCAATTTCCTATAATA+AGG - chr8_4:29777168-29777187 None:intergenic 20.0%
!! AAAGTTATCAATATTATGGA+TGG + chr8_4:29777205-29777224 Msa1322630:CDS 20.0%
!! AAGTTATCAATATTATGGAT+GGG + chr8_4:29777206-29777225 Msa1322630:CDS 20.0%
!! TAAATCTTCATTGATATTCA+AGG - chr8_4:29777400-29777419 None:intergenic 20.0%
!! TTGAATATCAATGAAGATTT+AGG + chr8_4:29777399-29777418 Msa1322630:CDS 20.0%
!! TGAATATCAATGAAGATTTA+GGG + chr8_4:29777400-29777419 Msa1322630:CDS 20.0%
!!! GCAAATTAAATATGTCTTTT+CGG + chr8_4:29777422-29777441 Msa1322630:CDS 20.0%
!! AAAAGAATGTCTGTTATATT+GGG + chr8_4:29778284-29778303 Msa1322630:CDS 20.0%
!! GAAAATGGAAAAGAAATAAA+AGG + chr8_4:29779243-29779262 Msa1322630:intron 20.0%
!! AAAAAGAAATGATACAACAA+AGG - chr8_4:29781153-29781172 None:intergenic 20.0%
!!! AGTTTTTGTTTCATACAAAA+AGG + chr8_4:29781261-29781280 Msa1322630:three_prime_UTR 20.0%
!! CTTGTATTTATAAAATTAGG+TGG + chr8_4:29781303-29781322 Msa1322630:three_prime_UTR 20.0%
!! CTTTTATAACTTTTCTTCCT+AGG + chr8_4:29776362-29776381 Msa1322630:CDS 25.0%
! AAAACAAAATCACAAGGAAT+CGG - chr8_4:29776676-29776695 None:intergenic 25.0%
! AAACCGAATAGGAATATATA+TGG + chr8_4:29776844-29776863 Msa1322630:CDS 25.0%
! ACTTAAGAATACTAATTGTG+TGG + chr8_4:29776942-29776961 Msa1322630:CDS 25.0%
! TGAATCGATTACCTTATTAT+AGG + chr8_4:29777154-29777173 Msa1322630:CDS 25.0%
!!! TAGGAAATTGGATTTTTCAA+AGG + chr8_4:29777173-29777192 Msa1322630:CDS 25.0%
!!! AGGAAATTGGATTTTTCAAA+GGG + chr8_4:29777174-29777193 Msa1322630:CDS 25.0%
! GAGGAAAGTTATCAATATTA+TGG + chr8_4:29777201-29777220 Msa1322630:CDS 25.0%
! AGTTATCAATATTATGGATG+GGG + chr8_4:29777207-29777226 Msa1322630:CDS 25.0%
! ATAGAAATGTACAAGGATAT+CGG - chr8_4:29777288-29777307 None:intergenic 25.0%
! CACATAATGATTGATATTCA+TGG + chr8_4:29777956-29777975 Msa1322630:CDS 25.0%
! AACATAAAAATGTCTGTTTG+GGG - chr8_4:29778038-29778057 None:intergenic 25.0%
! CAACATAAAAATGTCTGTTT+GGG - chr8_4:29778039-29778058 None:intergenic 25.0%
! TCAACATAAAAATGTCTGTT+TGG - chr8_4:29778040-29778059 None:intergenic 25.0%
!!! TTAGAATGATTTGCTGTTAA+TGG + chr8_4:29778071-29778090 Msa1322630:intron 25.0%
! CATAAAAAAAGGACTACTTT+GGG - chr8_4:29778199-29778218 None:intergenic 25.0%
! TCATAAAAAAAGGACTACTT+TGG - chr8_4:29778200-29778219 None:intergenic 25.0%
!!! ATGAGAGCATTCATAAAAAA+AGG - chr8_4:29778210-29778229 None:intergenic 25.0%
!! TTTTATGAATGCTCTCATTT+TGG + chr8_4:29778212-29778231 Msa1322630:intron 25.0%
!! TTTATGAATGCTCTCATTTT+GGG + chr8_4:29778213-29778232 Msa1322630:intron 25.0%
! GAAAAGAATGTCTGTTATAT+TGG + chr8_4:29778283-29778302 Msa1322630:CDS 25.0%
! AAAGAATGTCTGTTATATTG+GGG + chr8_4:29778285-29778304 Msa1322630:CDS 25.0%
! ATTGAATACAGACATAATAC+AGG + chr8_4:29778379-29778398 Msa1322630:CDS 25.0%
! AGAAAATAACCTATGCATAT+TGG + chr8_4:29778571-29778590 Msa1322630:CDS 25.0%
! GAAAATAACCTATGCATATT+GGG + chr8_4:29778572-29778591 Msa1322630:CDS 25.0%
! CACTATCAAGAATATATACA+AGG - chr8_4:29778922-29778941 None:intergenic 25.0%
! TTTCGTTCTCATTATTTGAA+GGG - chr8_4:29779211-29779230 None:intergenic 25.0%
! ATTTCGTTCTCATTATTTGA+AGG - chr8_4:29779212-29779231 None:intergenic 25.0%
! AATAATGAGAACGAAATACA+AGG + chr8_4:29779215-29779234 Msa1322630:intron 25.0%
! AAATACAAGGATAGAGAAAA+TGG + chr8_4:29779228-29779247 Msa1322630:intron 25.0%
! AGGCACATATAGAAATAAAT+TGG - chr8_4:29779653-29779672 None:intergenic 25.0%
!!! CCAAAACAATTTTTTGTTGT+AGG - chr8_4:29779986-29780005 None:intergenic 25.0%
!! CCTACAACAAAAAATTGTTT+TGG + chr8_4:29779983-29780002 Msa1322630:CDS 25.0%
!! GACTATTTCGATAGTTATTT+TGG + chr8_4:29780110-29780129 Msa1322630:CDS 25.0%
!! TTGATTTTGCAATCCATAAA+GGG - chr8_4:29780578-29780597 None:intergenic 25.0%
!!! ATTGATTTTGCAATCCATAA+AGG - chr8_4:29780579-29780598 None:intergenic 25.0%
!! TGTAAGATAAGGATTTTTCT+CGG - chr8_4:29780656-29780675 None:intergenic 25.0%
! ATAAACTTTACAACAAAACG+TGG - chr8_4:29780990-29781009 None:intergenic 25.0%
! GATAGAAAACAATGAAATCA+TGG - chr8_4:29781227-29781246 None:intergenic 25.0%
!! TTTCATTGTTTTCTATCCAA+AGG + chr8_4:29781230-29781249 Msa1322630:three_prime_UTR 25.0%
!! TTCATTGTTTTCTATCCAAA+GGG + chr8_4:29781231-29781250 Msa1322630:three_prime_UTR 25.0%
ATAAAGAAGAAGAAGCAAGT+TGG - chr8_4:29775698-29775717 None:intergenic 30.0%
! ATTTTCCAGATTTGAACTTC+TGG + chr8_4:29775796-29775815 Msa1322630:five_prime_UTR 30.0%
! TTTTCCAGATTTGAACTTCT+GGG + chr8_4:29775797-29775816 Msa1322630:five_prime_UTR 30.0%
!!! CTTTTTTCTTTCACTGTCTT+TGG + chr8_4:29775845-29775864 Msa1322630:five_prime_UTR 30.0%
AAGTCAAACTCAAACTATGA+TGG + chr8_4:29776054-29776073 Msa1322630:exon 30.0%
TTCTGGTAGAAATTCAACAA+GGG + chr8_4:29776147-29776166 Msa1322630:CDS 30.0%
AGCAAATTCAAATCTCTCAT+TGG - chr8_4:29776314-29776333 None:intergenic 30.0%
AATGAGAGATTTGAATTTGC+TGG + chr8_4:29776313-29776332 Msa1322630:CDS 30.0%
! ATGAGAGATTTGAATTTGCT+GGG + chr8_4:29776314-29776333 Msa1322630:CDS 30.0%
!! ATTTGAATTTGCTGGGAATT+CGG + chr8_4:29776321-29776340 Msa1322630:CDS 30.0%
AACTGTTCAAACAAATTCCT+AGG - chr8_4:29776382-29776401 None:intergenic 30.0%
TTAAAGATGCATATGAGGAT+TGG + chr8_4:29776524-29776543 Msa1322630:CDS 30.0%
CAGATAAAGTTGAGAACAAT+AGG + chr8_4:29776560-29776579 Msa1322630:CDS 30.0%
AAAGTTGAGAACAATAGGTT+AGG + chr8_4:29776565-29776584 Msa1322630:CDS 30.0%
!!! TTAGGATTGGTTTTGGTTAA+TGG + chr8_4:29776583-29776602 Msa1322630:CDS 30.0%
GTCATTTCATTGAGAAGAAA+TGG + chr8_4:29776605-29776624 Msa1322630:CDS 30.0%
TTTCATTGAGAAGAAATGGA+AGG + chr8_4:29776609-29776628 Msa1322630:CDS 30.0%
AAATGGAAGGATATTAGAGT+TGG + chr8_4:29776622-29776641 Msa1322630:CDS 30.0%
GACAACAAAACAAAATCACA+AGG - chr8_4:29776682-29776701 None:intergenic 30.0%
GTTCAAACTCTTAATCTAGA+TGG + chr8_4:29776730-29776749 Msa1322630:CDS 30.0%
TTAAGTTTCATGAAAAGGAG+AGG + chr8_4:29776797-29776816 Msa1322630:CDS 30.0%
ATATGGATTTCAAGCTACAA+TGG + chr8_4:29776861-29776880 Msa1322630:CDS 30.0%
AAGAATACTAATTGTGTGGT+TGG + chr8_4:29776946-29776965 Msa1322630:CDS 30.0%
TAGAAATGTACAAGGATATC+GGG - chr8_4:29777287-29777306 None:intergenic 30.0%
GATATCCTTGTACATTTCTA+TGG + chr8_4:29777287-29777306 Msa1322630:CDS 30.0%
AGAATCTTTGATCATGAAGT+AGG - chr8_4:29777334-29777353 None:intergenic 30.0%
AGATTCTAGATTGTATGATG+AGG + chr8_4:29777347-29777366 Msa1322630:CDS 30.0%
AAATTCAAGGTTTCAGTGTA+GGG + chr8_4:29777374-29777393 Msa1322630:CDS 30.0%
TTAACTTTCACCTTCATCTT+TGG - chr8_4:29777707-29777726 None:intergenic 30.0%
CTTATGCAATTAGCAAAAAG+TGG + chr8_4:29777734-29777753 Msa1322630:CDS 30.0%
TCAAGCTGATAGATTATCAA+GGG + chr8_4:29777858-29777877 Msa1322630:CDS 30.0%
CTCTATAAGCATAAAACCAT+AGG - chr8_4:29777924-29777943 None:intergenic 30.0%
ATATTCATGGAGAACAACAA+AGG + chr8_4:29777969-29777988 Msa1322630:CDS 30.0%
!! TGCATGAATTTGATAGTGAT+CGG + chr8_4:29778261-29778280 Msa1322630:CDS 30.0%
AGAAGAATAAGAGTGAAGAT+GGG - chr8_4:29778414-29778433 None:intergenic 30.0%
ATGCTTCAGAATTTGATCAA+TGG + chr8_4:29778474-29778493 Msa1322630:CDS 30.0%
AAGTACTTCTATGATTGGTA+GGG + chr8_4:29778517-29778536 Msa1322630:CDS 30.0%
ATCAAGAATATATACAAGGC+TGG - chr8_4:29778918-29778937 None:intergenic 30.0%
! GGAAAAGAAATAAAAGGCAT+CGG + chr8_4:29779249-29779268 Msa1322630:intron 30.0%
CTTTCTCCTTCATATGTTAT+AGG + chr8_4:29779324-29779343 Msa1322630:intron 30.0%
TTAGCACCTATAACATATGA+AGG - chr8_4:29779333-29779352 None:intergenic 30.0%
! TCTTTGTGCTAATTCTGTTT+TGG + chr8_4:29779544-29779563 Msa1322630:CDS 30.0%
TGACAACAGCTATAAATGAA+TGG + chr8_4:29779830-29779849 Msa1322630:CDS 30.0%
AAAATGGCAACAACAATAGT+TGG - chr8_4:29779892-29779911 None:intergenic 30.0%
ACTAAGATCCTTGTCAAAAA+TGG - chr8_4:29779908-29779927 None:intergenic 30.0%
TTGACAAGGATCTTAGTAAA+AGG + chr8_4:29779911-29779930 Msa1322630:CDS 30.0%
ACTGTAGATATAGCAAGTAT+GGG + chr8_4:29780078-29780097 Msa1322630:CDS 30.0%
!!! TATTTTGGTCAATTTGCACT+TGG + chr8_4:29780125-29780144 Msa1322630:CDS 30.0%
! TGATTTTGCAATCCATAAAG+GGG - chr8_4:29780577-29780596 None:intergenic 30.0%
!! CAAAGTTGACTTGTAAGATA+AGG - chr8_4:29780667-29780686 None:intergenic 30.0%
ATCTTACAAGTCAACTTTGT+AGG + chr8_4:29780668-29780687 Msa1322630:intron 30.0%
!! TGTTTCTATCCTAGTCTTAT+TGG + chr8_4:29780727-29780746 Msa1322630:intron 30.0%
! TTATTCTGGTTATGTTTGCT+AGG + chr8_4:29780942-29780961 Msa1322630:CDS 30.0%
TCTTGAAATCTGAATATCGT+CGG - chr8_4:29781030-29781049 None:intergenic 30.0%
CGTCAGAATATTATTGATGT+TGG + chr8_4:29781198-29781217 Msa1322630:three_prime_UTR 30.0%
AGAGAGAAAGCTTGTGAAAT+TGG - chr8_4:29775673-29775692 None:intergenic 35.0%
TGAAAGGTGGTAGAAGAAAA+GGG - chr8_4:29775761-29775780 None:intergenic 35.0%
ATGGATACAAAAAACCCATC+TGG + chr8_4:29776073-29776092 Msa1322630:CDS 35.0%
TGGATACAAAAAACCCATCT+GGG + chr8_4:29776074-29776093 Msa1322630:CDS 35.0%
! TCTTTGAAGAATTCCCAGAT+GGG - chr8_4:29776090-29776109 None:intergenic 35.0%
! ATCTTTGAAGAATTCCCAGA+TGG - chr8_4:29776091-29776110 None:intergenic 35.0%
TCATCATCAAGAAGAAGTTC+TGG + chr8_4:29776130-29776149 Msa1322630:CDS 35.0%
GTTCTGGTAGAAATTCAACA+AGG + chr8_4:29776146-29776165 Msa1322630:CDS 35.0%
AAATCAGTGATGAAGATGCT+AGG + chr8_4:29776260-29776279 Msa1322630:CDS 35.0%
!! AATCTCTCATTGGTTCTATC+AGG - chr8_4:29776304-29776323 None:intergenic 35.0%
!! TTACCTCAACTAGCTGTTTT+TGG + chr8_4:29776451-29776470 Msa1322630:CDS 35.0%
! AGGTGTTTCAATTTTGCCAT+TGG + chr8_4:29776477-29776496 Msa1322630:CDS 35.0%
ACAAGAAGAACAAAAGCCAA+TGG - chr8_4:29776496-29776515 None:intergenic 35.0%
TGCTGTTAAAGATGCATATG+AGG + chr8_4:29776519-29776538 Msa1322630:CDS 35.0%
TGAGAACAATAGGTTAGGAT+TGG + chr8_4:29776570-29776589 Msa1322630:CDS 35.0%
!!! CAATAGGTTAGGATTGGTTT+TGG + chr8_4:29776576-29776595 Msa1322630:CDS 35.0%
AGTTTGAACATAAGCAACAC+CGG - chr8_4:29776719-29776738 None:intergenic 35.0%
GTGAGTCTAATTTGAAGACT+AGG + chr8_4:29776752-29776771 Msa1322630:CDS 35.0%
TTAAGTGTGAGAAACCGAAT+AGG + chr8_4:29776833-29776852 Msa1322630:CDS 35.0%
TCCTCGAATATTGTACTTAG+AGG + chr8_4:29776913-29776932 Msa1322630:CDS 35.0%
TCCTCTAAGTACAATATTCG+AGG - chr8_4:29776917-29776936 None:intergenic 35.0%
AGTTCATTTGTGTCTCAAGA+CGG - chr8_4:29777041-29777060 None:intergenic 35.0%
!! GGATTTTTCAAAGGGAAAAG+AGG + chr8_4:29777182-29777201 Msa1322630:CDS 35.0%
AAGCTCCATAGAAATGTACA+AGG - chr8_4:29777295-29777314 None:intergenic 35.0%
ATGATGAGGCAACAAATTCA+AGG + chr8_4:29777361-29777380 Msa1322630:CDS 35.0%
CAAATTCAAGGTTTCAGTGT+AGG + chr8_4:29777373-29777392 Msa1322630:CDS 35.0%
! TATGTCTTTTCGGACAAAAC+TGG + chr8_4:29777432-29777451 Msa1322630:CDS 35.0%
AGTTTCAATGCGCTAGTATT+TGG + chr8_4:29777478-29777497 Msa1322630:CDS 35.0%
GTTTCAATGCGCTAGTATTT+GGG + chr8_4:29777479-29777498 Msa1322630:CDS 35.0%
TTTCAATGCGCTAGTATTTG+GGG + chr8_4:29777480-29777499 Msa1322630:CDS 35.0%
! ATTCAACTTGCTCATTCTCA+AGG - chr8_4:29777533-29777552 None:intergenic 35.0%
! CAAGTTGAATACTCTCTTCA+AGG + chr8_4:29777543-29777562 Msa1322630:CDS 35.0%
! TGTTATTTGGTCTCAGTGAA+TGG + chr8_4:29777668-29777687 Msa1322630:intron 35.0%
ATACGATTTCTTTCTTGCAC+TGG + chr8_4:29777784-29777803 Msa1322630:CDS 35.0%
AATCTATCAGCTTGACTGTA+GGG - chr8_4:29777853-29777872 None:intergenic 35.0%
TAATCTATCAGCTTGACTGT+AGG - chr8_4:29777854-29777873 None:intergenic 35.0%
GTCAAGCTGATAGATTATCA+AGG + chr8_4:29777857-29777876 Msa1322630:CDS 35.0%
CAAGCTGATAGATTATCAAG+GGG + chr8_4:29777859-29777878 Msa1322630:CDS 35.0%
ATCAATCATTATGTGACCTG+AGG - chr8_4:29777951-29777970 None:intergenic 35.0%
TAAAGCAGTTGAAGGAGTTA+AGG - chr8_4:29778161-29778180 None:intergenic 35.0%
!! TACTTTGGGACCTAATTCAA+GGG - chr8_4:29778185-29778204 None:intergenic 35.0%
CAGAAGAATAAGAGTGAAGA+TGG - chr8_4:29778415-29778434 None:intergenic 35.0%
TCTTCACTCTTATTCTTCTG+TGG + chr8_4:29778415-29778434 Msa1322630:CDS 35.0%
CTTCACTCTTATTCTTCTGT+GGG + chr8_4:29778416-29778435 Msa1322630:CDS 35.0%
CAAGTACTTCTATGATTGGT+AGG + chr8_4:29778516-29778535 Msa1322630:CDS 35.0%
CTGCAGTTTATCTTCAATAG+CGG - chr8_4:29778603-29778622 None:intergenic 35.0%
ATTGAAGATAAACTGCAGCA+AGG + chr8_4:29778605-29778624 Msa1322630:CDS 35.0%
GAAAGCCGGTATTAAAGTAT+GGG + chr8_4:29778655-29778674 Msa1322630:CDS 35.0%
CAACACCCATACTTTAATAC+CGG - chr8_4:29778663-29778682 None:intergenic 35.0%
!! ATTAAAGTATGGGTGTTGAC+TGG + chr8_4:29778665-29778684 Msa1322630:CDS 35.0%
!! TTAAAGTATGGGTGTTGACT+GGG + chr8_4:29778666-29778685 Msa1322630:CDS 35.0%
CAAGAAACTGCCATATCAAT+TGG + chr8_4:29778695-29778714 Msa1322630:CDS 35.0%
! TATCTTGAAGGAAGTTCTGA+TGG + chr8_4:29778854-29778873 Msa1322630:CDS 35.0%
! TGATAGTGAACTTGAAGAAG+AGG + chr8_4:29778934-29778953 Msa1322630:CDS 35.0%
TACTCGACAACAAAGAACAA+CGG - chr8_4:29779073-29779092 None:intergenic 35.0%
TTGTCTCTCTCGTAAAGAAT+AGG + chr8_4:29779115-29779134 Msa1322630:CDS 35.0%
CGATGTATCAATGATCCAAA+TGG + chr8_4:29779353-29779372 Msa1322630:CDS 35.0%
! AATGGCTTCAGATTTTGCAA+TGG + chr8_4:29779422-29779441 Msa1322630:CDS 35.0%
! ATGGCTTCAGATTTTGCAAT+GGG + chr8_4:29779423-29779442 Msa1322630:CDS 35.0%
! GTTCCTCTCTTATTTGTACA+CGG + chr8_4:29779462-29779481 Msa1322630:CDS 35.0%
!!! TTTGTGGCTTTTAAGATGCA+TGG + chr8_4:29779732-29779751 Msa1322630:intron 35.0%
!!! TGTTGTTGCCATTTTTGACA+AGG + chr8_4:29779897-29779916 Msa1322630:CDS 35.0%
TTGTTCCTCTCTTTGCATAT+TGG + chr8_4:29780049-29780068 Msa1322630:CDS 35.0%
TGTTCCTCTCTTTGCATATT+GGG + chr8_4:29780050-29780069 Msa1322630:CDS 35.0%
CACTGTAGATATAGCAAGTA+TGG + chr8_4:29780077-29780096 Msa1322630:CDS 35.0%
CTGTAGATATAGCAAGTATG+GGG + chr8_4:29780079-29780098 Msa1322630:CDS 35.0%
TGTAGATATAGCAAGTATGG+GGG + chr8_4:29780080-29780099 Msa1322630:CDS 35.0%
GATTTCTCATGCATCCATTT+GGG + chr8_4:29780173-29780192 Msa1322630:CDS 35.0%
ATTTCTCATGCATCCATTTG+GGG + chr8_4:29780174-29780193 Msa1322630:CDS 35.0%
CCAACGTAGACTTATTTAAG+AGG - chr8_4:29780602-29780621 None:intergenic 35.0%
CCTCTTAAATAAGTCTACGT+TGG + chr8_4:29780599-29780618 Msa1322630:intron 35.0%
AATAAGTCTACGTTGGATAG+TGG + chr8_4:29780606-29780625 Msa1322630:intron 35.0%
TGTTCCAAATGTTCAATCCT+AGG + chr8_4:29780763-29780782 Msa1322630:intron 35.0%
ACTATTTAAGCCATCCAATG+TGG - chr8_4:29780813-29780832 None:intergenic 35.0%
ACATGTGTACAAAACTTTGC+AGG + chr8_4:29780892-29780911 Msa1322630:intron 35.0%
CATGTGTACAAAACTTTGCA+GGG + chr8_4:29780893-29780912 Msa1322630:intron 35.0%
CTTGAAATCTGAATATCGTC+GGG - chr8_4:29781029-29781048 None:intergenic 35.0%
TCGAGAAGTTTGAGAATAGA+AGG + chr8_4:29781054-29781073 Msa1322630:CDS 35.0%
CGAGAAGTTTGAGAATAGAA+GGG + chr8_4:29781055-29781074 Msa1322630:CDS 35.0%
TTTGAGAATAGAAGGGTCAA+TGG + chr8_4:29781062-29781081 Msa1322630:CDS 35.0%
CAACACTAGTGTTATCTTTG+TGG - chr8_4:29781122-29781141 None:intergenic 35.0%
CAAAAACTCTATCTACCCTT+TGG - chr8_4:29781249-29781268 None:intergenic 35.0%
!! AAAGGGTAGCTTTGGAGAAA+TGG - chr8_4:29775744-29775763 None:intergenic 40.0%
GTAGAAGAAAAGGGTAGCTT+TGG - chr8_4:29775752-29775771 None:intergenic 40.0%
GTGAAAGGTGGTAGAAGAAA+AGG - chr8_4:29775762-29775781 None:intergenic 40.0%
TGTTGCAGATGTGAAGTGAA+AGG - chr8_4:29775777-29775796 None:intergenic 40.0%
CAAACCCAGAAGTTCAAATC+TGG - chr8_4:29775804-29775823 None:intergenic 40.0%
GTGTGTGAAACAAACAACGT+TGG + chr8_4:29775887-29775906 Msa1322630:five_prime_UTR 40.0%
GAAACAAACAACGTTGGTGT+TGG + chr8_4:29775893-29775912 Msa1322630:five_prime_UTR 40.0%
!! TCAACAAGGGAAGTCACTTT+TGG + chr8_4:29776160-29776179 Msa1322630:CDS 40.0%
TGATCCATATCTCACAGGTT+TGG - chr8_4:29776197-29776216 None:intergenic 40.0%
ACCTGTGAGATATGGATCAA+AGG + chr8_4:29776198-29776217 Msa1322630:CDS 40.0%
CCTGTGAGATATGGATCAAA+GGG + chr8_4:29776199-29776218 Msa1322630:CDS 40.0%
!! AATTTGCTGGGAATTCGGTT+CGG + chr8_4:29776326-29776345 Msa1322630:CDS 40.0%
CTACCAAAAACAGCTAGTTG+AGG - chr8_4:29776457-29776476 None:intergenic 40.0%
!!! CAACTAGCTGTTTTTGGTAG+AGG + chr8_4:29776457-29776476 Msa1322630:CDS 40.0%
AAGATGCATATGAGGATTGG+AGG + chr8_4:29776527-29776546 Msa1322630:CDS 40.0%
CATGAAAAGGAGAGGTTTAG+TGG + chr8_4:29776805-29776824 Msa1322630:CDS 40.0%
TGGATTTCAAGCTACAATGG+AGG + chr8_4:29776864-29776883 Msa1322630:CDS 40.0%
GATGGAAAGAGATTGTCACT+TGG + chr8_4:29776889-29776908 Msa1322630:CDS 40.0%
AAAGCTATGCTCAACAACTC+AGG + chr8_4:29776997-29777016 Msa1322630:CDS 40.0%
TCAATATTATGGATGGGGAG+TGG + chr8_4:29777212-29777231 Msa1322630:CDS 40.0%
! CCTTTTCACATTCCTCATGT+CGG + chr8_4:29777239-29777258 Msa1322630:CDS 40.0%
GGTAAACTATAACCGACATG+AGG - chr8_4:29777254-29777273 None:intergenic 40.0%
! CATGTCGGTTATAGTTTACC+AGG + chr8_4:29777254-29777273 Msa1322630:CDS 40.0%
TTTGGTCTCAGTGAATGGAA+AGG + chr8_4:29777673-29777692 Msa1322630:intron 40.0%
! AGTGGATTTGCAAGCAAAGA+TGG + chr8_4:29777752-29777771 Msa1322630:CDS 40.0%
TATGTCAACGCTTGTTCATC+TGG - chr8_4:29777890-29777909 None:intergenic 40.0%
AAGCATAAAACCATAGGCAG+CGG - chr8_4:29777918-29777937 None:intergenic 40.0%
ACTGCTTTAGCCCTTGAATT+AGG + chr8_4:29778172-29778191 Msa1322630:intron 40.0%
!! CTACTTTGGGACCTAATTCA+AGG - chr8_4:29778186-29778205 None:intergenic 40.0%
CTATGCAGGTTCAATGTCTT+GGG + chr8_4:29778236-29778255 Msa1322630:intron 40.0%
TATGCAGGTTCAATGTCTTG+GGG + chr8_4:29778237-29778256 Msa1322630:intron 40.0%
! TCGGTGAAACTTTTCGTCAA+AGG + chr8_4:29778320-29778339 Msa1322630:CDS 40.0%
! CGGTGAAACTTTTCGTCAAA+GGG + chr8_4:29778321-29778340 Msa1322630:CDS 40.0%
! GGTGAAACTTTTCGTCAAAG+GGG + chr8_4:29778322-29778341 Msa1322630:CDS 40.0%
CTTATTCTTCTGTGGGTTTG+AGG + chr8_4:29778423-29778442 Msa1322630:CDS 40.0%
!! GTTTGAGGACGCTTGTTATT+GGG + chr8_4:29778438-29778457 Msa1322630:CDS 40.0%
! TCAATGGCATTTTGCCTTTG+AGG + chr8_4:29778490-29778509 Msa1322630:CDS 40.0%
GCAGCAAGTACTTCTATGAT+TGG + chr8_4:29778512-29778531 Msa1322630:CDS 40.0%
CTTAGAGACTCAATAGCTTC+CGG - chr8_4:29778635-29778654 None:intergenic 40.0%
! ATTGAGTCTCTAAGGAAAGC+CGG + chr8_4:29778641-29778660 Msa1322630:CDS 40.0%
GGAAAGCCGGTATTAAAGTA+TGG + chr8_4:29778654-29778673 Msa1322630:CDS 40.0%
!! TAAAGTATGGGTGTTGACTG+GGG + chr8_4:29778667-29778686 Msa1322630:CDS 40.0%
TGACGAGTAGCCAATTGATA+TGG - chr8_4:29778708-29778727 None:intergenic 40.0%
TCGTCAAAGCTACTAACAAG+CGG + chr8_4:29778722-29778741 Msa1322630:CDS 40.0%
! TGGAGTTGTTTCAACTCCTA+TGG + chr8_4:29778874-29778893 Msa1322630:CDS 40.0%
CCATCAATAATCAACGCCAT+AGG - chr8_4:29778893-29778912 None:intergenic 40.0%
!! CCTATGGCGTTGATTATTGA+TGG + chr8_4:29778890-29778909 Msa1322630:CDS 40.0%
! ATGTGCTGATAGATCTCAGA+TGG + chr8_4:29778958-29778977 Msa1322630:intron 40.0%
CTCTCTCGTAAAGAATAGGA+CGG + chr8_4:29779119-29779138 Msa1322630:CDS 40.0%
ATGATCCAAATGGCTGATGT+TGG + chr8_4:29779363-29779382 Msa1322630:CDS 40.0%
TGATCCAAATGGCTGATGTT+GGG + chr8_4:29779364-29779383 Msa1322630:CDS 40.0%
! TGGCTTCAGATTTTGCAATG+GGG + chr8_4:29779424-29779443 Msa1322630:CDS 40.0%
! ATTTTGCAATGGGGCAGTTT+CGG + chr8_4:29779433-29779452 Msa1322630:CDS 40.0%
TGTCCGTGTACAAATAAGAG+AGG - chr8_4:29779468-29779487 None:intergenic 40.0%
! TCTTATTTGTACACGGACAC+TGG + chr8_4:29779469-29779488 Msa1322630:CDS 40.0%
TTAAAAGCCACAAAGAGCGA+TGG - chr8_4:29779726-29779745 None:intergenic 40.0%
! TACAGAGTCCTCAGCTTTAT+GGG + chr8_4:29779941-29779960 Msa1322630:CDS 40.0%
AACGCTTTGCCATAACGTAT+CGG - chr8_4:29780019-29780038 None:intergenic 40.0%
GTTCCTCTCTTTGCATATTG+GGG + chr8_4:29780051-29780070 Msa1322630:CDS 40.0%
TTCCTCTCTTTGCATATTGG+GGG + chr8_4:29780052-29780071 Msa1322630:CDS 40.0%
GGATTTCTCATGCATCCATT+TGG + chr8_4:29780172-29780191 Msa1322630:CDS 40.0%
TTTCTCATGCATCCATTTGG+GGG + chr8_4:29780175-29780194 Msa1322630:CDS 40.0%
CGCAACTTTCATATGTGTCA+TGG + chr8_4:29780206-29780225 Msa1322630:CDS 40.0%
TACCAGTAACCATGAAGTGA+CGG - chr8_4:29780246-29780265 None:intergenic 40.0%
ATCCAACGCAGTAAAACACA+AGG + chr8_4:29780288-29780307 Msa1322630:intron 40.0%
GCATGCATGACATGACTAAT+TGG - chr8_4:29780342-29780361 None:intergenic 40.0%
TTCAATTCCTAACTCGTGTG+TGG + chr8_4:29780496-29780515 Msa1322630:intron 40.0%
TGTGTGGAGAAAACTCTGTT+GGG + chr8_4:29780512-29780531 Msa1322630:intron 40.0%
! GAACATTTGGAACATGACCT+AGG - chr8_4:29780757-29780776 None:intergenic 40.0%
CAAGCCTAGGATTGAACATT+TGG - chr8_4:29780770-29780789 None:intergenic 40.0%
TTCAATCCTAGGCTTGAGAA+GGG + chr8_4:29780774-29780793 Msa1322630:intron 40.0%
!!! TTGCAGGGCTATTTTTGATG+TGG + chr8_4:29780908-29780927 Msa1322630:intron 40.0%
TGTGAAATTGGACAGCAGAG+AGG - chr8_4:29775661-29775680 None:intergenic 45.0%
TGCAGATGTGAAGTGAAAGG+TGG - chr8_4:29775774-29775793 None:intergenic 45.0%
GAGTCCAAACCTGTGAGATA+TGG + chr8_4:29776190-29776209 Msa1322630:CDS 45.0%
CCCTTTGATCCATATCTCAC+AGG - chr8_4:29776202-29776221 None:intergenic 45.0%
ATGCATATGAGGATTGGAGG+AGG + chr8_4:29776530-29776549 Msa1322630:CDS 45.0%
TGAACATAAGCAACACCGGT+AGG - chr8_4:29776715-29776734 None:intergenic 45.0%
CAAGCTACAATGGAGGTTGA+TGG + chr8_4:29776871-29776890 Msa1322630:CDS 45.0%
CCGACATGAGGAATGTGAAA+AGG - chr8_4:29777242-29777261 None:intergenic 45.0%
AGGATATCGGGATCATAACC+TGG - chr8_4:29777275-29777294 None:intergenic 45.0%
! TCTATGGAGCTTGTTCGTGT+TGG + chr8_4:29777303-29777322 Msa1322630:CDS 45.0%
CACTCTGACTGAGAACAAGA+TGG + chr8_4:29777455-29777474 Msa1322630:CDS 45.0%
! AACTTGCTCATTCTCAAGGC+TGG - chr8_4:29777529-29777548 None:intergenic 45.0%
GGTCTTGAAGCCAAAGATGA+AGG + chr8_4:29777694-29777713 Msa1322630:CDS 45.0%
TCGGATGTGTCAACAACAAG+AGG - chr8_4:29777830-29777849 None:intergenic 45.0%
TATCAGCTTGACTGTAGGGT+CGG - chr8_4:29777849-29777868 None:intergenic 45.0%
ATGCTTATAGAGCGAACCTC+AGG + chr8_4:29777932-29777951 Msa1322630:CDS 45.0%
TTGAAGGAGTTAAGGAGCTG+GGG - chr8_4:29778153-29778172 None:intergenic 45.0%
GTTGAAGGAGTTAAGGAGCT+GGG - chr8_4:29778154-29778173 None:intergenic 45.0%
AGTTGAAGGAGTTAAGGAGC+TGG - chr8_4:29778155-29778174 None:intergenic 45.0%
TCAAGGGCTAAAGCAGTTGA+AGG - chr8_4:29778169-29778188 None:intergenic 45.0%
GCTATGCAGGTTCAATGTCT+TGG + chr8_4:29778235-29778254 Msa1322630:intron 45.0%
ATTGGGGTGCAACGACAATT+CGG + chr8_4:29778301-29778320 Msa1322630:CDS 45.0%
! GAAACTTTTCGTCAAAGGGG+CGG + chr8_4:29778325-29778344 Msa1322630:CDS 45.0%
!! GGTTTGAGGACGCTTGTTAT+TGG + chr8_4:29778437-29778456 Msa1322630:CDS 45.0%
!! AGAAGTACTTGCTGCCTCAA+AGG - chr8_4:29778507-29778526 None:intergenic 45.0%
TAAACTGCAGCAAGGTGTAC+CGG + chr8_4:29778613-29778632 Msa1322630:CDS 45.0%
CGGAAGCTATTGAGTCTCTA+AGG + chr8_4:29778633-29778652 Msa1322630:CDS 45.0%
AAAAAACGTAGCTGCGTCTG+AGG + chr8_4:29778823-29778842 Msa1322630:CDS 45.0%
GAGGTTGGCAACTATCTTGA+AGG + chr8_4:29778842-29778861 Msa1322630:CDS 45.0%
AGAGCTGGAATCAACAGCAT+TGG - chr8_4:29779029-29779048 None:intergenic 45.0%
TTCGTGCAAGTTCAAAGAGC+TGG - chr8_4:29779044-29779063 None:intergenic 45.0%
! ACAATCCCAGCCTTTTGCAA+CGG - chr8_4:29779099-29779118 None:intergenic 45.0%
AGATACCATACCATCTCCGA+TGG - chr8_4:29779160-29779179 None:intergenic 45.0%
GATCCAAATGGCTGATGTTG+GGG + chr8_4:29779365-29779384 Msa1322630:CDS 45.0%
CACTGGAATTACCAACGACT+AGG + chr8_4:29779486-29779505 Msa1322630:CDS 45.0%
TTACCAACGACTAGGCTACA+TGG + chr8_4:29779494-29779513 Msa1322630:CDS 45.0%
ACTATGACCATCGCTCTTTG+TGG + chr8_4:29779716-29779735 Msa1322630:intron 45.0%
GTTGTGTGTCTTTGTCTACC+AGG + chr8_4:29779782-29779801 Msa1322630:intron 45.0%
AGCAGTGAAGAGAACATACC+TGG - chr8_4:29779803-29779822 None:intergenic 45.0%
CATAAAGCTGAGGACTCTGT+AGG - chr8_4:29779942-29779961 None:intergenic 45.0%
CTACAGAGTCCTCAGCTTTA+TGG + chr8_4:29779940-29779959 Msa1322630:CDS 45.0%
! ACAGAGTCCTCAGCTTTATG+GGG + chr8_4:29779942-29779961 Msa1322630:CDS 45.0%
TGACGATAGCCGATACGTTA+TGG + chr8_4:29780007-29780026 Msa1322630:CDS 45.0%
TAGCAAGTATGGGGGATCTT+TGG + chr8_4:29780088-29780107 Msa1322630:CDS 45.0%
ACTTGGCCATGGATGTAATC+AGG + chr8_4:29780142-29780161 Msa1322630:CDS 45.0%
AGTCCACCTGATTACATCCA+TGG - chr8_4:29780151-29780170 None:intergenic 45.0%
! TGGATGTAATCAGGTGGACT+TGG + chr8_4:29780151-29780170 Msa1322630:CDS 45.0%
GATGCTATACCGTCACTTCA+TGG + chr8_4:29780234-29780253 Msa1322630:CDS 45.0%
TACCGTCACTTCATGGTTAC+TGG + chr8_4:29780241-29780260 Msa1322630:CDS 45.0%
! CTCCTTGTGTTTTACTGCGT+TGG - chr8_4:29780293-29780312 None:intergenic 45.0%
CAGAGTCACCAACATGTGAT+AGG + chr8_4:29780427-29780446 Msa1322630:intron 45.0%
CACTCTGACCTATCACATGT+TGG - chr8_4:29780438-29780457 None:intergenic 45.0%
CAACATGTGATAGGTCAGAG+TGG + chr8_4:29780436-29780455 Msa1322630:intron 45.0%
! GTTTTCTCCACACACGAGTT+AGG - chr8_4:29780506-29780525 None:intergenic 45.0%
GTGTGTGGAGAAAACTCTGT+TGG + chr8_4:29780511-29780530 Msa1322630:intron 45.0%
GTGTGGAGAAAACTCTGTTG+GGG + chr8_4:29780513-29780532 Msa1322630:intron 45.0%
AGAAAACTCTGTTGGGGTGA+GGG + chr8_4:29780519-29780538 Msa1322630:intron 45.0%
ATCCAACAGGTTCCCCTTTA+TGG + chr8_4:29780562-29780581 Msa1322630:intron 45.0%
ATCCATAAAGGGGAACCTGT+TGG - chr8_4:29780567-29780586 None:intergenic 45.0%
CTAGGTGGTCCAATAAGACT+AGG - chr8_4:29780739-29780758 None:intergenic 45.0%
!! CTAGTCTTATTGGACCACCT+AGG + chr8_4:29780737-29780756 Msa1322630:intron 45.0%
! CATTTGGAACATGACCTAGG+TGG - chr8_4:29780754-29780773 None:intergenic 45.0%
GTTCAATCCTAGGCTTGAGA+AGG + chr8_4:29780773-29780792 Msa1322630:intron 45.0%
GTTGAGAGTTCCACATTGGA+TGG + chr8_4:29780800-29780819 Msa1322630:intron 45.0%
TGGCAAGCACGACATTATTC+TGG + chr8_4:29780928-29780947 Msa1322630:CDS 45.0%
TTGGACAGCAGAGAGGTCAA+TGG - chr8_4:29775654-29775673 None:intergenic 50.0%
TTGTCGACGAGTGATCCTAC+CGG + chr8_4:29776697-29776716 Msa1322630:CDS 50.0%
!! GTTGGTGTTGCCGTGTATTG+TGG + chr8_4:29776964-29776983 Msa1322630:CDS 50.0%
CGTCTCACGACCACAATACA+CGG - chr8_4:29776977-29776996 None:intergenic 50.0%
TCAAGACGGCTCCTCTTAGA+CGG - chr8_4:29777027-29777046 None:intergenic 50.0%
CTTCAGTTTGCGCTGCTGTT+TGG + chr8_4:29777109-29777128 Msa1322630:CDS 50.0%
! GCTCTCATTTTGGGCTATGC+AGG + chr8_4:29778222-29778241 Msa1322630:intron 50.0%
!! GGACGCTTGTTATTGGGATG+CGG + chr8_4:29778444-29778463 Msa1322630:CDS 50.0%
!! GACGCTTGTTATTGGGATGC+GGG + chr8_4:29778445-29778464 Msa1322630:CDS 50.0%
GTCGTGCAGAAGACGTTTAC+AGG + chr8_4:29778781-29778800 Msa1322630:CDS 50.0%
TCGAGTAGCTCCGTTGCAAA+AGG + chr8_4:29779086-29779105 Msa1322630:CDS 50.0%
TAGCTCCGTTGCAAAAGGCT+GGG + chr8_4:29779091-29779110 Msa1322630:CDS 50.0%
TCCGATGGCTAGAGTCATGT+CGG - chr8_4:29779145-29779164 None:intergenic 50.0%
ATGACTCTAGCCATCGGAGA+TGG + chr8_4:29779147-29779166 Msa1322630:CDS 50.0%
TCTAGCCATCGGAGATGGTA+TGG + chr8_4:29779152-29779171 Msa1322630:intron 50.0%
CAACCCCAACATCAGCCATT+TGG - chr8_4:29779371-29779390 None:intergenic 50.0%
CAAATGGCTGATGTTGGGGT+TGG + chr8_4:29779369-29779388 Msa1322630:CDS 50.0%
CTCCCCCAATATGCAAAGAG+AGG - chr8_4:29780057-29780076 None:intergenic 50.0%
GGTCAATTTGCACTTGGCCA+TGG + chr8_4:29780131-29780150 Msa1322630:CDS 50.0%
TGGCCATGGATGTAATCAGG+TGG + chr8_4:29780145-29780164 Msa1322630:CDS 50.0%
TGCGATGATAGACCCCCAAA+TGG - chr8_4:29780190-29780209 None:intergenic 50.0%
! AGGTCAGAGTGGTAACGATC+AGG + chr8_4:29780447-29780466 Msa1322630:intron 50.0%
GAGAAAACTCTGTTGGGGTG+AGG + chr8_4:29780518-29780537 Msa1322630:intron 50.0%
ACCTGTTGGATGCACAAGGT+GGG - chr8_4:29780553-29780572 None:intergenic 50.0%
AACCTGTTGGATGCACAAGG+TGG - chr8_4:29780554-29780573 None:intergenic 50.0%
GCGTGTTGAGAGTTCCACAT+TGG + chr8_4:29780796-29780815 Msa1322630:intron 50.0%
ACTCAGGAGCTCCGTCTAAG+AGG + chr8_4:29777013-29777032 Msa1322630:CDS 55.0%
! GGAGCTTGTTCGTGTTGGTC+AGG + chr8_4:29777308-29777327 Msa1322630:CDS 55.0%
ACATATGCTGCCGCTGCCTA+TGG + chr8_4:29777905-29777924 Msa1322630:CDS 55.0%
! TAGGGCTGCTTTGCTTCGCA+AGG + chr8_4:29778535-29778554 Msa1322630:CDS 55.0%
CGGTAGCGCCCAATATGCAT+AGG - chr8_4:29778583-29778602 None:intergenic 55.0%
! AACGTAGCTGCGTCTGAGGT+TGG + chr8_4:29778827-29778846 Msa1322630:CDS 55.0%
GTAGCTCCGTTGCAAAAGGC+TGG + chr8_4:29779090-29779109 Msa1322630:CDS 55.0%
GCCGACATGACTCTAGCCAT+CGG + chr8_4:29779141-29779160 Msa1322630:CDS 55.0%
! GATGTTGGGGTTGGCATCAG+TGG + chr8_4:29779378-29779397 Msa1322630:CDS 55.0%
GTTGGCATCAGTGGTCAGGA+GGG + chr8_4:29779387-29779406 Msa1322630:CDS 55.0%
GGAGGGTAGGCAAGCTGTAA+TGG + chr8_4:29779404-29779423 Msa1322630:CDS 55.0%
GCACCATGTAGCCTAGTCGT+TGG - chr8_4:29779500-29779519 None:intergenic 55.0%
ACACATGCAAGCGTGCACAC+AGG - chr8_4:29779673-29779692 None:intergenic 55.0%
! AGTCCTCAGCTTTATGGGGC+TGG + chr8_4:29779946-29779965 Msa1322630:CDS 55.0%
TGTCCAGCCCCATAAAGCTG+AGG - chr8_4:29779952-29779971 None:intergenic 55.0%
TGGGGCTGGACAAAGACAAG+AGG + chr8_4:29779960-29779979 Msa1322630:CDS 55.0%
AAACTCTGTTGGGGTGAGGG+TGG + chr8_4:29780522-29780541 Msa1322630:intron 55.0%
AACTCTGTTGGGGTGAGGGT+GGG + chr8_4:29780523-29780542 Msa1322630:intron 55.0%
ACCCACCTTGTGCATCCAAC+AGG + chr8_4:29780549-29780568 Msa1322630:intron 55.0%
GGGAACCTGTTGGATGCACA+AGG - chr8_4:29780557-29780576 None:intergenic 55.0%
AACACGCCCTTCTCAAGCCT+AGG - chr8_4:29780783-29780802 None:intergenic 55.0%
!! GCTGGGAATTCGGTTCGGAC+CGG + chr8_4:29776331-29776350 Msa1322630:CDS 60.0%
! TGGGGTTGGCATCAGTGGTC+AGG + chr8_4:29779383-29779402 Msa1322630:CDS 60.0%
GGTTGGCATCAGTGGTCAGG+AGG + chr8_4:29779386-29779405 Msa1322630:CDS 60.0%
GCATCAGTGGTCAGGAGGGT+AGG + chr8_4:29779391-29779410 Msa1322630:CDS 60.0%
TCTGTTGGGGTGAGGGTGGG+AGG + chr8_4:29780526-29780545 Msa1322630:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 29775642 29781399 29775642 ID=Msa1322630;Name=Msa1322630
chr8_4 mRNA 29775642 29781399 29775642 ID=Msa1322630-mRNA-1;Parent=Msa1322630;Name=Msa1322630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=428|1|1|1|1|1|7|269|1177
chr8_4 exon 29775642 29777564 29775642 ID=Msa1322630-mRNA-1:exon:9900;Parent=Msa1322630-mRNA-1
chr8_4 exon 29777684 29777990 29777684 ID=Msa1322630-mRNA-1:exon:9901;Parent=Msa1322630-mRNA-1
chr8_4 exon 29778244 29778955 29778244 ID=Msa1322630-mRNA-1:exon:9902;Parent=Msa1322630-mRNA-1
chr8_4 exon 29779045 29779168 29779045 ID=Msa1322630-mRNA-1:exon:9903;Parent=Msa1322630-mRNA-1
chr8_4 exon 29779346 29779565 29779346 ID=Msa1322630-mRNA-1:exon:9904;Parent=Msa1322630-mRNA-1
chr8_4 exon 29779804 29780262 29779804 ID=Msa1322630-mRNA-1:exon:9905;Parent=Msa1322630-mRNA-1
chr8_4 exon 29780914 29781399 29780914 ID=Msa1322630-mRNA-1:exon:9906;Parent=Msa1322630-mRNA-1
chr8_4 five_prime_UTR 29775642 29776069 29775642 ID=Msa1322630-mRNA-1:five_prime_utr;Parent=Msa1322630-mRNA-1
chr8_4 CDS 29776070 29777564 29776070 ID=Msa1322630-mRNA-1:cds;Parent=Msa1322630-mRNA-1
chr8_4 CDS 29777684 29777990 29777684 ID=Msa1322630-mRNA-1:cds;Parent=Msa1322630-mRNA-1
chr8_4 CDS 29778244 29778955 29778244 ID=Msa1322630-mRNA-1:cds;Parent=Msa1322630-mRNA-1
chr8_4 CDS 29779045 29779168 29779045 ID=Msa1322630-mRNA-1:cds;Parent=Msa1322630-mRNA-1
chr8_4 CDS 29779346 29779565 29779346 ID=Msa1322630-mRNA-1:cds;Parent=Msa1322630-mRNA-1
chr8_4 CDS 29779804 29780262 29779804 ID=Msa1322630-mRNA-1:cds;Parent=Msa1322630-mRNA-1
chr8_4 CDS 29780914 29781130 29780914 ID=Msa1322630-mRNA-1:cds;Parent=Msa1322630-mRNA-1
chr8_4 three_prime_UTR 29781131 29781399 29781131 ID=Msa1322630-mRNA-1:three_prime_utr;Parent=Msa1322630-mRNA-1
Gene Sequence

>Msa1322630

ATGATGGATACAAAAAACCCATCTGGGAATTCTTCAAAGATTGAAACTTTCATGCATAATTCATCATCAAGAAGAAGTTCTGGTAGAAATTCAACAAGGGAAGTCACTTTTGGTCACTCTGAGTCCAAACCTGTGAGATATGGATCAAAGGGTGCTGTTGATTCTGAAGCATTCAGCATGTCTCAGAAAGAAATCAGTGATGAAGATGCTAGGTTGATTTATGTTGATGATCCTGATAGAACCAATGAGAGATTTGAATTTGCTGGGAATTCGGTTCGGACCGGAAAATACTCTTTTATAACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTATTTCCTTATAATTGCTATTCTTAATCAGTTACCTCAACTAGCTGTTTTTGGTAGAGGTGTTTCAATTTTGCCATTGGCTTTTGTTCTTCTTGTTACTGCTGTTAAAGATGCATATGAGGATTGGAGGAGGCATAGATCAGATAAAGTTGAGAACAATAGGTTAGGATTGGTTTTGGTTAATGGTCATTTCATTGAGAAGAAATGGAAGGATATTAGAGTTGGTGAGATCATTAAAATCAATGCAAATGAACCGATTCCTTGTGATTTTGTTTTGTTGTCGACGAGTGATCCTACCGGTGTTGCTTATGTTCAAACTCTTAATCTAGATGGTGAGTCTAATTTGAAGACTAGGTATGCAAAACAAGAGACTCAATTTAAGTTTCATGAAAAGGAGAGGTTTAGTGGTTTGATTAAGTGTGAGAAACCGAATAGGAATATATATGGATTTCAAGCTACAATGGAGGTTGATGGAAAGAGATTGTCACTTGGTTCCTCGAATATTGTACTTAGAGGATGTGAACTTAAGAATACTAATTGTGTGGTTGGTGTTGCCGTGTATTGTGGTCGTGAGACGAAAGCTATGCTCAACAACTCAGGAGCTCCGTCTAAGAGGAGCCGTCTTGAGACACAAATGAACTCTGAGATCATCATGCTTTCGTTCTTTCTTGTAGTTTTGTGTTCAGTTACTTCAGTTTGCGCTGCTGTTTGGTTAAAGCGAAACAAGAATGAATTGAATCGATTACCTTATTATAGGAAATTGGATTTTTCAAAGGGAAAAGAGGAAAGTTATCAATATTATGGATGGGGAGTGGAAATCCTTTTCACATTCCTCATGTCGGTTATAGTTTACCAGGTTATGATCCCGATATCCTTGTACATTTCTATGGAGCTTGTTCGTGTTGGTCAGGCCTACTTCATGATCAAAGATTCTAGATTGTATGATGAGGCAACAAATTCAAGGTTTCAGTGTAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCGGACAAAACTGGCACTCTGACTGAGAACAAGATGGAGTTTCAATGCGCTAGTATTTGGGGTGTCGATTACAGTTCTGCACAAGCCAGCCTTGAGAATGAGCAAGTTGAATACTCTCTTCAAGTGAATGGAAAGGTCTTGAAGCCAAAGATGAAGGTGAAAGTTAATCAAGAGCTTATGCAATTAGCAAAAAGTGGATTTGCAAGCAAAGATGGAAAACAGATATACGATTTCTTTCTTGCACTGGCAGCATGCAATACTATTGTGCCTCTTGTTGTTGACACATCCGACCCTACAGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAACAAGCGTTGACATATGCTGCCGCTGCCTATGGTTTTATGCTTATAGAGCGAACCTCAGGTCACATAATGATTGATATTCATGGAGAACAACAAAGGTTCAATGTCTTGGGGTTGCATGAATTTGATAGTGATCGGAAAAGAATGTCTGTTATATTGGGGTGCAACGACAATTCGGTGAAACTTTTCGTCAAAGGGGCGGATACATCAATGTTCAGTGTGATCAATAAATCATTGAATACAGACATAATACAGGATACTGAAACCCATCTTCACTCTTATTCTTCTGTGGGTTTGAGGACGCTTGTTATTGGGATGCGGGACTTAAATGCTTCAGAATTTGATCAATGGCATTTTGCCTTTGAGGCAGCAAGTACTTCTATGATTGGTAGGGCTGCTTTGCTTCGCAAGGTTGCTGCAAATGTAGAAAATAACCTATGCATATTGGGCGCTACCGCTATTGAAGATAAACTGCAGCAAGGTGTACCGGAAGCTATTGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAAGAAACTGCCATATCAATTGGCTACTCGTCAAAGCTACTAACAAGCGGCATGACTCAATTTAGAATTAAGAGCAATAATCGAGAGTCGTGCAGAAGACGTTTACAGGATGCACTTCTCATGTCTAGAAAAAACGTAGCTGCGTCTGAGGTTGGCAACTATCTTGAAGGAAGTTCTGATGGAGTTGTTTCAACTCCTATGGCGTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGATAGTGAACTTGAAGAAGAGCTCTTTGAACTTGCACGAAGATGTTCCGTTGTTCTTTGTTGTCGAGTAGCTCCGTTGCAAAAGGCTGGGATTGTCTCTCTCGTAAAGAATAGGACGGCCGACATGACTCTAGCCATCGGAGATGGTGCTAACGATGTATCAATGATCCAAATGGCTGATGTTGGGGTTGGCATCAGTGGTCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTCGGTTTTTAGTTCCTCTCTTATTTGTACACGGACACTGGAATTACCAACGACTAGGCTACATGGTGCTATACAATTTTTACAGAAATGCTGTCTTTGTGCTAATTCTGTTTTGGTATGTTCTCTTCACTGCTTTCACTTTGACAACAGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATCTACACTGCAGTGCCAACTATTGTTGTTGCCATTTTTGACAAGGATCTTAGTAAAAGGACTCTCCTACAGAGTCCTCAGCTTTATGGGGCTGGACAAAGACAAGAGGCCTACAACAAAAAATTGTTTTGGTTGACGATAGCCGATACGTTATGGCAAAGCGTTGTTGTCTTTTTTGTTCCTCTCTTTGCATATTGGGGGAGCACTGTAGATATAGCAAGTATGGGGGATCTTTGGACTATTTCGATAGTTATTTTGGTCAATTTGCACTTGGCCATGGATGTAATCAGGTGGACTTGGATTTCTCATGCATCCATTTGGGGGTCTATCATCGCAACTTTCATATGTGTCATGGTTGTTGATGCTATACCGTCACTTCATGGTTACTGGGCTATTTTTGATGTGGCAAGCACGACATTATTCTGGTTATGTTTGCTAGGAATACTGATAGCAGCATTGCTTCCACGTTTTGTTGTAAAGTTTATTTATCAATATTATTGTCCCGACGATATTCAGATTTCAAGAGAAATCGAGAAGTTTGAGAATAGAAGGGTCAATGGAGATAGACAGATAGAAATGCTTCACATCTCAAATCCACAAAGATAA
Protein sequence

>Msa1322630

MMDTKNPSGNSSKIETFMHNSSSRRSSGRNSTREVTFGHSESKPVRYGSKGAVDSEAFSMSQKEISDEDARLIYVDDPDRTNERFEFAGNSVRTGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLGLVLVNGHFIEKKWKDIRVGEIIKINANEPIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFSGLIKCEKPNRNIYGFQATMEVDGKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEIIMLSFFLVVLCSVTSVCAAVWLKRNKNELNRLPYYRKLDFSKGKEESYQYYGWGVEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSAQASLENEQVEYSLQVNGKVLKPKMKVKVNQELMQLAKSGFASKDGKQIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIMIDIHGEQQRFNVLGLHEFDSDRKRMSVILGCNDNSVKLFVKGADTSMFSVINKSLNTDIIQDTETHLHSYSSVGLRTLVIGMRDLNASEFDQWHFAFEAASTSMIGRAALLRKVAANVENNLCILGATAIEDKLQQGVPEAIESLRKAGIKVWVLTGDKQETAISIGYSSKLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNVAASEVGNYLEGSSDGVVSTPMALIIDGTSLVYILDSELEEELFELARRCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVAIFDKDLSKRTLLQSPQLYGAGQRQEAYNKKLFWLTIADTLWQSVVVFFVPLFAYWGSTVDIASMGDLWTISIVILVNLHLAMDVIRWTWISHASIWGSIIATFICVMVVDAIPSLHGYWAIFDVASTTLFWLCLLGILIAALLPRFVVKFIYQYYCPDDIQISREIEKFENRRVNGDRQIEMLHISNPQR*