AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1080960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080960 MtrunA17_Chr7g0267701 82.427 717 61 6 1 655 1 714 0.0 1165
Msa1080960 MtrunA17_Chr1g0176821 61.951 410 127 7 1 391 1 400 1.88e-164 484
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080960 AT5G06440.3 53.165 316 135 3 1 315 1 304 2.49e-115 354
Msa1080960 AT5G06440.2 53.165 316 135 3 1 315 1 304 2.49e-115 354
Msa1080960 AT5G06440.4 51.393 323 137 4 1 315 1 311 3.44e-111 343
Msa1080960 AT5G06440.1 53.310 287 119 4 1 285 1 274 1.36e-102 315
Msa1080960 AT5G06440.5 59.565 230 88 2 87 315 5 230 4.63e-98 306
Msa1080960 AT5G06440.6 59.817 219 83 2 98 315 1 215 3.24e-94 296
Msa1080960 AT3G11720.1 44.411 331 152 6 1 326 1 304 1.20e-93 300
Msa1080960 AT3G11720.2 44.411 331 152 6 1 326 1 304 1.20e-93 300
Msa1080960 AT3G11720.3 44.411 331 152 6 1 326 55 358 9.59e-93 299
Msa1080960 AT3G11720.4 49.130 230 97 4 98 326 1 211 5.96e-74 245

Find 130 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTAATTATTTGCATTT+TGG 0.137288 7_2:-80675424 None:intergenic
AGCCACTAGTTAACTGAATT+TGG 0.156539 7_2:-80672910 None:intergenic
ATCATATAAATAGTTGTTTA+TGG 0.158470 7_2:+80673026 Msa1080960:five_prime_UTR
TTCCTCTTGTTTAGCTGTTT+TGG 0.177761 7_2:-80676731 None:intergenic
ATGCATTAGCAGAAGAAAAT+AGG 0.182295 7_2:+80676776 Msa1080960:exon
ATCTTCAATATTTGCTTCTA+TGG 0.193108 7_2:-80675885 None:intergenic
ATTCTCACCATTTCTTATAA+AGG 0.226461 7_2:-80673918 None:intergenic
CGACAATCTCACAATTCTTT+TGG 0.239123 7_2:-80675844 None:intergenic
AAATAATATGTCATCTAATT+AGG 0.240278 7_2:+80672873 Msa1080960:five_prime_UTR
TTGTAGGGCAATAGGGAATT+TGG 0.245211 7_2:+80675002 Msa1080960:intron
ACCAGTGTTGTTCCTTGTTT+GGG 0.246792 7_2:+80676873 Msa1080960:three_prime_UTR
TTCATTTCAAGGCAACTTAT+TGG 0.246795 7_2:+80675063 Msa1080960:CDS
GCCTTGAAATGAAATTTATA+AGG 0.259631 7_2:-80675053 None:intergenic
TTCAATAAGCAATGTATTAT+AGG 0.275063 7_2:-80673721 None:intergenic
CTCACAACACCCTTTGCTTC+AGG 0.277935 7_2:-80674654 None:intergenic
GACCAGTGTTGTTCCTTGTT+TGG 0.289544 7_2:+80676872 Msa1080960:three_prime_UTR
ATTATTTATAGATGAGTCTT+AGG 0.290365 7_2:+80677059 Msa1080960:three_prime_UTR
AATTATTTGTTCATCAATAT+TGG 0.293909 7_2:-80676988 None:intergenic
TTCTCACCATTTCTTATAAA+GGG 0.318688 7_2:-80673917 None:intergenic
CATCTGAAAGAAGTTATTTC+CGG 0.324574 7_2:+80674715 Msa1080960:CDS
GATGTATTGCTTTCCTCAAA+TGG 0.327557 7_2:-80675662 None:intergenic
GTGCTATTTGTTCTCCAGTC+TGG 0.329723 7_2:-80674242 None:intergenic
CCCTTATAAATTTCATTTCA+AGG 0.335848 7_2:+80675052 Msa1080960:CDS
GAGAACAAATAGCACTAATA+AGG 0.341307 7_2:+80674250 Msa1080960:CDS
CTTATTGAAGGCTATGTAGA+TGG 0.348985 7_2:+80673735 Msa1080960:CDS
GAGATCGCAGAAGCAGATAT+TGG 0.371598 7_2:+80675737 Msa1080960:CDS
TGCATTAGCAGAAGAAAATA+GGG 0.372121 7_2:+80676777 Msa1080960:exon
AAAATTAATGAGACTATTGA+TGG 0.372387 7_2:+80674612 Msa1080960:CDS
AATCATCCCTTTATAAGAAA+TGG 0.382734 7_2:+80673911 Msa1080960:CDS
TCAATAAGCAATGTATTATA+GGG 0.386854 7_2:-80673720 None:intergenic
TCAATCTGGCTTGCTTCAAT+TGG 0.387863 7_2:-80676620 None:intergenic
TCAATGAATATGAATCAATC+TGG 0.388850 7_2:-80676634 None:intergenic
GCTTGTTATCAGATATTGTC+TGG 0.396019 7_2:-80676676 None:intergenic
TATAATACATTGCTTATTGA+AGG 0.397643 7_2:+80673723 Msa1080960:CDS
TTCACAATCAGAGATGGAAT+TGG 0.399834 7_2:+80673226 Msa1080960:CDS
TATCAGCTCAAATGTAAAAC+AGG 0.404649 7_2:+80676003 Msa1080960:CDS
ATTTCATCAGTTCAGAAATA+CGG 0.409322 7_2:+80676049 Msa1080960:CDS
CCTTGAAATGAAATTTATAA+GGG 0.411284 7_2:-80675052 None:intergenic
TTAGTCAAAGTAAGCAAGAT+TGG 0.417597 7_2:+80675369 Msa1080960:CDS
CTTCTTTCGACAGTTAAAAC+AGG 0.422510 7_2:+80673650 Msa1080960:intron
ATTGAATATGATAATATAAG+AGG 0.428070 7_2:+80675953 Msa1080960:CDS
ACATAAATGCATGGAAAGTT+CGG 0.428283 7_2:-80676901 None:intergenic
TTAGCACATCAAGGACTGAT+TGG 0.429890 7_2:+80673427 Msa1080960:CDS
CTCCATGGCCACTGTCTACA+AGG 0.436068 7_2:+80674389 Msa1080960:CDS
TGATACATCTATTGTGCTAA+AGG 0.436279 7_2:+80675820 Msa1080960:CDS
AACTGAATTTGGACAGAGAA+AGG 0.441475 7_2:-80672899 None:intergenic
GGGAGGTTATGTTATACAAA+AGG 0.451155 7_2:+80674689 Msa1080960:CDS
ACTACAGGATTGATATATGT+TGG 0.455317 7_2:+80676850 Msa1080960:three_prime_UTR
ATGAACGGCGACAAAGAATT+CGG 0.464485 7_2:+80675224 Msa1080960:CDS
TGTGACTGACCAACATCAAC+AGG 0.471454 7_2:-80673759 None:intergenic
TGATTCTGATTTGAGAAATC+CGG 0.472762 7_2:-80676590 None:intergenic
AACTTTGACTTTCTGATGGA+AGG 0.473468 7_2:+80673052 Msa1080960:five_prime_UTR
GGTACATCTGAAGACATGTC+TGG 0.473696 7_2:-80676710 None:intergenic
GTTGTGAGAATTGATTTGTT+GGG 0.475038 7_2:+80674669 Msa1080960:CDS
AGTACACGACATTCCATTTG+AGG 0.475441 7_2:+80675649 Msa1080960:CDS
TGTGCAATATAGGGAGAGGT+TGG 0.477595 7_2:+80673127 Msa1080960:CDS
AGGCTTTAGAAACATTAGAA+AGG 0.478529 7_2:+80676023 Msa1080960:CDS
AAGCCTTGACAATTTACTAC+AGG 0.479616 7_2:+80676835 Msa1080960:three_prime_UTR
GATACATCTATTGTGCTAAA+GGG 0.484119 7_2:+80675821 Msa1080960:CDS
GATACATAAAGATGGACAAA+AGG 0.484559 7_2:+80673096 Msa1080960:exon
ATCCATAGCATTTGATTCAT+CGG 0.487059 7_2:-80675300 None:intergenic
GGCTTTAGAAACATTAGAAA+GGG 0.487114 7_2:+80676024 Msa1080960:CDS
AGATATTGTACAAATTGAAA+AGG 0.488307 7_2:+80675904 Msa1080960:CDS
GTATTATAGGGAGTTCCCTC+TGG 0.491261 7_2:-80673708 None:intergenic
TGACAGCTTTATGCGTCTCA+TGG 0.495714 7_2:+80673887 Msa1080960:intron
CTTTGACTAAGCTCTTCAGC+AGG 0.503153 7_2:-80675356 None:intergenic
TGTTGTGAGAATTGATTTGT+TGG 0.503261 7_2:+80674668 Msa1080960:CDS
TAGTCAAAGTAAGCAAGATT+GGG 0.503463 7_2:+80675370 Msa1080960:CDS
TCAAGGCAACTTATTGGCAG+TGG 0.505086 7_2:+80675069 Msa1080960:CDS
CAATATTGGTCTATGATTCA+AGG 0.505504 7_2:-80676974 None:intergenic
GCATAACTTTGACTTTCTGA+TGG 0.505690 7_2:+80673048 Msa1080960:five_prime_UTR
TGTTTGCAGAAGGTCCAGAC+TGG 0.509433 7_2:+80674228 Msa1080960:CDS
AAGTAAATGACATTTCAGTC+GGG 0.509863 7_2:+80675792 Msa1080960:CDS
GATGCAGTAACTTTGAAAGT+AGG 0.512463 7_2:-80674201 None:intergenic
TGCATCTGATTGTTTGCAGA+AGG 0.516483 7_2:+80674218 Msa1080960:CDS
TACCGATGAATCAAATGCTA+TGG 0.518027 7_2:+80675298 Msa1080960:CDS
AAAGTAAATGACATTTCAGT+CGG 0.519463 7_2:+80675791 Msa1080960:CDS
ATGAAATTTATAAGGGATGG+AGG 0.526404 7_2:-80675045 None:intergenic
AGGGAATTTGGATATCAAGC+TGG 0.527263 7_2:+80675014 Msa1080960:CDS
AATATTGGTCTATGATTCAA+GGG 0.538012 7_2:-80676973 None:intergenic
TCTCTGATTGTGAAGAATGA+TGG 0.539462 7_2:-80673217 None:intergenic
GAAATGAAATTTATAAGGGA+TGG 0.541927 7_2:-80675048 None:intergenic
AAAAGATGTATCACCTTCCT+CGG 0.546283 7_2:-80675522 None:intergenic
GACAGCTTTATGCGTCTCAT+GGG 0.548438 7_2:+80673888 Msa1080960:intron
AGAGATTGTACAAATTGAGA+AGG 0.555855 7_2:+80675616 Msa1080960:CDS
AGTGCTTCTGCAGATGAAAG+TGG 0.566002 7_2:+80673399 Msa1080960:CDS
CATGACATTTCAACCGAGGA+AGG 0.569041 7_2:+80675509 Msa1080960:CDS
AGAGATTGTACAAAGTGAGA+AGG 0.571592 7_2:+80675472 Msa1080960:CDS
TCCCTTGTAGACAGTGGCCA+TGG 0.571642 7_2:-80674391 None:intergenic
ATAATTTGTAAGATCAAATG+AGG 0.571787 7_2:-80673162 None:intergenic
TCATTCTTCACAATCAGAGA+TGG 0.573861 7_2:+80673220 Msa1080960:CDS
AAGAAAGGATGAAGCCTCCA+TGG 0.577075 7_2:+80674374 Msa1080960:intron
ATGAGTCTTAGGTGTGTCAA+AGG 0.577667 7_2:+80677070 Msa1080960:three_prime_UTR
GTCCAAATTCAGTTAACTAG+TGG 0.578614 7_2:+80672908 Msa1080960:five_prime_UTR
TTCGGTTCATTCAGGCACAC+AGG 0.582875 7_2:+80676524 Msa1080960:intron
TGAATCAAATGCTATGGATG+AGG 0.587498 7_2:+80675304 Msa1080960:CDS
AGGAGCAGATCTTAGCATGA+AGG 0.589267 7_2:+80676544 Msa1080960:CDS
ACTCACTTCACATAAATGCA+TGG 0.591522 7_2:-80676910 None:intergenic
TGGTTTCAGACTTTATCAGA+AGG 0.594007 7_2:+80675089 Msa1080960:CDS
TACCAAAACAGCTAAACAAG+AGG 0.598662 7_2:+80676729 Msa1080960:CDS
GTGGAGGATTTAGCACATCA+AGG 0.603076 7_2:+80673418 Msa1080960:CDS
GTGAGAATTGATTTGTTGGG+AGG 0.607741 7_2:+80674672 Msa1080960:CDS
ATATTGTGCAATATAGGGAG+AGG 0.608785 7_2:+80673123 Msa1080960:CDS
AGTTCGGAAAACCCCAAACA+AGG 0.612535 7_2:-80676885 None:intergenic
CTTGTAGACAGTGGCCATGG+AGG 0.613608 7_2:-80674388 None:intergenic
TGATGTGATTCCTGAAGCAA+AGG 0.614045 7_2:+80674644 Msa1080960:CDS
AACATACAACAAGTCAGTCA+AGG 0.623049 7_2:-80675252 None:intergenic
AATCCTGTAGTAAATTGTCA+AGG 0.628047 7_2:-80676838 None:intergenic
GCTGTAGCTTCTAAGATGAA+CGG 0.631947 7_2:+80675209 Msa1080960:CDS
AAATTACAACAAAATAGCAC+CGG 0.632071 7_2:+80676571 Msa1080960:CDS
AGTAAATGACATTTCAGTCG+GGG 0.634575 7_2:+80675793 Msa1080960:CDS
CCAGTGTTGTTCCTTGTTTG+GGG 0.637560 7_2:+80676874 Msa1080960:three_prime_UTR
CAATCAGAGATGGAATTGGA+AGG 0.638150 7_2:+80673230 Msa1080960:CDS
CAAAATGCAAATAATTACAA+TGG 0.638245 7_2:+80675425 Msa1080960:CDS
GTAGATGGACCTGTTGATGT+TGG 0.638645 7_2:+80673750 Msa1080960:CDS
TTCCGCGTTATGTATCGTGA+AGG 0.644276 7_2:+80673684 Msa1080960:CDS
TCCATGGCCACTGTCTACAA+GGG 0.652310 7_2:+80674390 Msa1080960:CDS
AATACGGATTTCGTTCACGC+AGG 0.658313 7_2:+80676065 Msa1080960:CDS
ATGGCCACTGTCTACAAGGG+AGG 0.663692 7_2:+80674393 Msa1080960:CDS
CCCCAAACAAGGAACAACAC+TGG 0.667683 7_2:-80676874 None:intergenic
ATGTATCGTGAAGGACCAGA+GGG 0.667773 7_2:+80673693 Msa1080960:CDS
TATGTATCGTGAAGGACCAG+AGG 0.674519 7_2:+80673692 Msa1080960:CDS
CGGCGACAAAGAATTCGGCA+AGG 0.680174 7_2:+80675229 Msa1080960:CDS
GATGTGATTCCTGAAGCAAA+GGG 0.685960 7_2:+80674645 Msa1080960:CDS
ACAGCCTCCCTTGTAGACAG+TGG 0.690378 7_2:-80674397 None:intergenic
GCTTCTGCAGATGAAAGTGG+AGG 0.692008 7_2:+80673402 Msa1080960:CDS
AAAGTAGGAACAGTAAACTG+TGG 0.716270 7_2:-80674186 None:intergenic
AGTGCATGACATTTCAACCG+AGG 0.717008 7_2:+80675505 Msa1080960:CDS
ACAGTTAAAACAGGATAACG+AGG 0.723822 7_2:+80673659 Msa1080960:intron
GTCCTTCACGATACATAACG+CGG 0.774533 7_2:-80673686 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTCAAAATATATATAATA+TGG - chr7_2:80673839-80673858 None:intergenic 10.0%
!! AAATAATATGTCATCTAATT+AGG + chr7_2:80672873-80672892 Msa1080960:five_prime_UTR 15.0%
!! ATCATATAAATAGTTGTTTA+TGG + chr7_2:80673026-80673045 Msa1080960:five_prime_UTR 15.0%
!! TTTATGTATCTAAAAAAAGA+AGG - chr7_2:80673086-80673105 None:intergenic 15.0%
!!! TTTTTTTAGATACATAAAGA+TGG + chr7_2:80673088-80673107 Msa1080960:exon 15.0%
!! GATAAAAATAAAACAAAACT+TGG - chr7_2:80673482-80673501 None:intergenic 15.0%
!!! ATTTTTCAATTAAATTCTCA+AGG + chr7_2:80673610-80673629 Msa1080960:intron 15.0%
!! AGAACAATTAATGAAAATTA+TGG + chr7_2:80674063-80674082 Msa1080960:intron 15.0%
!!! ATTTTATATCATTTGTTGAT+TGG + chr7_2:80674785-80674804 Msa1080960:intron 15.0%
!! TGAAACAAAATATTACTTAT+TGG - chr7_2:80674929-80674948 None:intergenic 15.0%
!!! ATAAGTAATATTTTGTTTCA+TGG + chr7_2:80674929-80674948 Msa1080960:intron 15.0%
!!! TATTTTTTGTCAAATTTTGT+AGG + chr7_2:80674986-80675005 Msa1080960:intron 15.0%
!!! ATTTTTTGTCAAATTTTGTA+GGG + chr7_2:80674987-80675006 Msa1080960:intron 15.0%
!! ATTGAATATGATAATATAAG+AGG + chr7_2:80675953-80675972 Msa1080960:CDS 15.0%
!! AATTATTTGTTCATCAATAT+TGG - chr7_2:80676991-80677010 None:intergenic 15.0%
!!! TATTGTCATTTAAAGAAAAA+AGG + chr7_2:80677033-80677052 Msa1080960:three_prime_UTR 15.0%
!!! ATTGTCATTTAAAGAAAAAA+GGG + chr7_2:80677034-80677053 Msa1080960:three_prime_UTR 15.0%
!!! GCTGAAAATTTTCAAATTTA+TGG + chr7_2:80672930-80672949 Msa1080960:five_prime_UTR 20.0%
!! AAAAACTTAATTGTCCTAAA+AGG - chr7_2:80672968-80672987 None:intergenic 20.0%
!! GAAAAATATTGTGCAATATA+GGG + chr7_2:80673118-80673137 Msa1080960:CDS 20.0%
!!! ATAATTTGTAAGATCAAATG+AGG - chr7_2:80673165-80673184 None:intergenic 20.0%
!! TCAATAAGCAATGTATTATA+GGG - chr7_2:80673723-80673742 None:intergenic 20.0%
!! TTCAATAAGCAATGTATTAT+AGG - chr7_2:80673724-80673743 None:intergenic 20.0%
!! TATAATACATTGCTTATTGA+AGG + chr7_2:80673723-80673742 Msa1080960:CDS 20.0%
!! TTCGTTGTTAAACTTAAAAA+GGG - chr7_2:80673814-80673833 None:intergenic 20.0%
!! AGAAATGAAAATTGTGATAA+AGG - chr7_2:80674159-80674178 None:intergenic 20.0%
!!! TTTATGCTTAATTTTATCTC+AGG + chr7_2:80674575-80674594 Msa1080960:intron 20.0%
!! AAAATTAATGAGACTATTGA+TGG + chr7_2:80674612-80674631 Msa1080960:CDS 20.0%
!! TTAGAAATTTCTCTTTCATT+GGG + chr7_2:80674831-80674850 Msa1080960:intron 20.0%
!! CCTTGAAATGAAATTTATAA+GGG - chr7_2:80675055-80675074 None:intergenic 20.0%
!!! CATTGTAATTATTTGCATTT+TGG - chr7_2:80675427-80675446 None:intergenic 20.0%
!! CAAAATGCAAATAATTACAA+TGG + chr7_2:80675425-80675444 Msa1080960:CDS 20.0%
!!! AATACATCTTTTGTACTAAA+AGG + chr7_2:80675677-80675696 Msa1080960:CDS 20.0%
!! AGATATTGTACAAATTGAAA+AGG + chr7_2:80675904-80675923 Msa1080960:CDS 20.0%
!! GAATAATTACAAAAATTACG+TGG + chr7_2:80676378-80676397 Msa1080960:intron 20.0%
!! TATTGTTACATATGATTGTT+TGG + chr7_2:80676438-80676457 Msa1080960:intron 20.0%
!! TATGATTGTTTGGAAATATT+AGG + chr7_2:80676448-80676467 Msa1080960:intron 20.0%
!!! TTGTCATTTAAAGAAAAAAG+GGG + chr7_2:80677035-80677054 Msa1080960:three_prime_UTR 20.0%
!! ATTATTTATAGATGAGTCTT+AGG + chr7_2:80677059-80677078 Msa1080960:three_prime_UTR 20.0%
! GGAAAAATATTGTGCAATAT+AGG + chr7_2:80673117-80673136 Msa1080960:CDS 25.0%
! ATAAACTCATGATACTATAG+TGG - chr7_2:80673296-80673315 None:intergenic 25.0%
!!! TCTATTTCTTTTTTTGTTGC+AGG + chr7_2:80673315-80673334 Msa1080960:intron 25.0%
!! TCTGAAATGAAGTTATCAAT+TGG - chr7_2:80673504-80673523 None:intergenic 25.0%
!! ATTGATAACTTCATTTCAGA+AGG + chr7_2:80673504-80673523 Msa1080960:intron 25.0%
!! TTGATAACTTCATTTCAGAA+GGG + chr7_2:80673505-80673524 Msa1080960:intron 25.0%
! CTTCGTTGTTAAACTTAAAA+AGG - chr7_2:80673815-80673834 None:intergenic 25.0%
! AATCATCCCTTTATAAGAAA+TGG + chr7_2:80673911-80673930 Msa1080960:CDS 25.0%
! TTCTCACCATTTCTTATAAA+GGG - chr7_2:80673920-80673939 None:intergenic 25.0%
! ATTCTCACCATTTCTTATAA+AGG - chr7_2:80673921-80673940 None:intergenic 25.0%
! ACTCATGAATATCTATGTAA+GGG + chr7_2:80674032-80674051 Msa1080960:intron 25.0%
!! TATCACAATTTTCATTTCTC+AGG + chr7_2:80674160-80674179 Msa1080960:intron 25.0%
! ATATAAGCATTCAAAGGTAA+AGG - chr7_2:80674339-80674358 None:intergenic 25.0%
!! TGTTCCATATTTTGTAAGAA+AGG + chr7_2:80674359-80674378 Msa1080960:intron 25.0%
! TCATCCTTTCTTACAAAATA+TGG - chr7_2:80674366-80674385 None:intergenic 25.0%
!!! GATAGTAGTTCTTTTGAAAA+CGG + chr7_2:80674459-80674478 Msa1080960:CDS 25.0%
! GTTAGAAATTTCTCTTTCAT+TGG + chr7_2:80674830-80674849 Msa1080960:intron 25.0%
! GAAATGAAATTTATAAGGGA+TGG - chr7_2:80675051-80675070 None:intergenic 25.0%
! CCCTTATAAATTTCATTTCA+AGG + chr7_2:80675052-80675071 Msa1080960:CDS 25.0%
! GCCTTGAAATGAAATTTATA+AGG - chr7_2:80675056-80675075 None:intergenic 25.0%
! AAAGTAAATGACATTTCAGT+CGG + chr7_2:80675791-80675810 Msa1080960:CDS 25.0%
! ATCTTCAATATTTGCTTCTA+TGG - chr7_2:80675888-80675907 None:intergenic 25.0%
! ATTTCATCAGTTCAGAAATA+CGG + chr7_2:80676049-80676068 Msa1080960:CDS 25.0%
!!! TCTAAGCACTGATTATAAAT+GGG - chr7_2:80676314-80676333 None:intergenic 25.0%
!!! TTGACACTTTTATTTCCTTT+CGG + chr7_2:80676506-80676525 Msa1080960:intron 25.0%
! AAATTACAACAAAATAGCAC+CGG + chr7_2:80676571-80676590 Msa1080960:CDS 25.0%
! TCAATGAATATGAATCAATC+TGG - chr7_2:80676637-80676656 None:intergenic 25.0%
!! AATATTGGTCTATGATTCAA+GGG - chr7_2:80676976-80676995 None:intergenic 25.0%
GATACATAAAGATGGACAAA+AGG + chr7_2:80673096-80673115 Msa1080960:exon 30.0%
! TATATGATTTGAGCTTGTTC+TGG + chr7_2:80673255-80673274 Msa1080960:intron 30.0%
!!! TTTTTTTGTTGCAGGATATG+AGG + chr7_2:80673323-80673342 Msa1080960:intron 30.0%
TGATAACTTCATTTCAGAAG+GGG + chr7_2:80673506-80673525 Msa1080960:intron 30.0%
CACTCATGAATATCTATGTA+AGG + chr7_2:80674031-80674050 Msa1080960:intron 30.0%
! TAATAATATCAGTTGGTGTC+TGG - chr7_2:80674092-80674111 None:intergenic 30.0%
GTGTGCTTAATAATATCAGT+TGG - chr7_2:80674099-80674118 None:intergenic 30.0%
GAGAACAAATAGCACTAATA+AGG + chr7_2:80674250-80674269 Msa1080960:CDS 30.0%
!! AAAGGTAAAGGCGTTTAATA+TGG - chr7_2:80674327-80674346 None:intergenic 30.0%
GGAACAATATAAGCATTCAA+AGG - chr7_2:80674345-80674364 None:intergenic 30.0%
AGAAACAGAAAAAAAGATCG+AGG - chr7_2:80674491-80674510 None:intergenic 30.0%
!! TGTTGTGAGAATTGATTTGT+TGG + chr7_2:80674668-80674687 Msa1080960:CDS 30.0%
!! GTTGTGAGAATTGATTTGTT+GGG + chr7_2:80674669-80674688 Msa1080960:CDS 30.0%
! CATCTGAAAGAAGTTATTTC+CGG + chr7_2:80674715-80674734 Msa1080960:CDS 30.0%
ACTCACTTAAAAAAACTCAC+CGG - chr7_2:80674737-80674756 None:intergenic 30.0%
! CCTTGGTTATTTAACTTCTT+CGG + chr7_2:80674860-80674879 Msa1080960:intron 30.0%
! TCAAATTTTGTAGGGCAATA+GGG + chr7_2:80674995-80675014 Msa1080960:intron 30.0%
ATGAAATTTATAAGGGATGG+AGG - chr7_2:80675048-80675067 None:intergenic 30.0%
TTCATTTCAAGGCAACTTAT+TGG + chr7_2:80675063-80675082 Msa1080960:CDS 30.0%
ATCCATAGCATTTGATTCAT+CGG - chr7_2:80675303-80675322 None:intergenic 30.0%
TTAGTCAAAGTAAGCAAGAT+TGG + chr7_2:80675369-80675388 Msa1080960:CDS 30.0%
TAGTCAAAGTAAGCAAGATT+GGG + chr7_2:80675370-80675389 Msa1080960:CDS 30.0%
ATTGGGTGAAAAATATGTCT+CGG + chr7_2:80675387-80675406 Msa1080960:CDS 30.0%
! AATGGTGAGATTTTAGATAC+AGG + chr7_2:80675443-80675462 Msa1080960:CDS 30.0%
! GATACATCTTTTGTACTACA+TGG + chr7_2:80675533-80675552 Msa1080960:CDS 30.0%
AGAGATTGTACAAATTGAGA+AGG + chr7_2:80675616-80675635 Msa1080960:CDS 30.0%
AAGTAAATGACATTTCAGTC+GGG + chr7_2:80675792-80675811 Msa1080960:CDS 30.0%
TGATACATCTATTGTGCTAA+AGG + chr7_2:80675820-80675839 Msa1080960:CDS 30.0%
GATACATCTATTGTGCTAAA+GGG + chr7_2:80675821-80675840 Msa1080960:CDS 30.0%
TATCAGCTCAAATGTAAAAC+AGG + chr7_2:80676003-80676022 Msa1080960:CDS 30.0%
!! AGGCTTTAGAAACATTAGAA+AGG + chr7_2:80676023-80676042 Msa1080960:CDS 30.0%
!! GGCTTTAGAAACATTAGAAA+GGG + chr7_2:80676024-80676043 Msa1080960:CDS 30.0%
! TGAACAAGTTTTGCAGAATA+CGG - chr7_2:80676151-80676170 None:intergenic 30.0%
!! GTCTAAGCACTGATTATAAA+TGG - chr7_2:80676315-80676334 None:intergenic 30.0%
TACAATGTGAGATTCTTGAA+TGG + chr7_2:80676345-80676364 Msa1080960:intron 30.0%
! TGATTCTGATTTGAGAAATC+CGG - chr7_2:80676593-80676612 None:intergenic 30.0%
ATGCATTAGCAGAAGAAAAT+AGG + chr7_2:80676776-80676795 Msa1080960:exon 30.0%
TGCATTAGCAGAAGAAAATA+GGG + chr7_2:80676777-80676796 Msa1080960:exon 30.0%
AATCCTGTAGTAAATTGTCA+AGG - chr7_2:80676841-80676860 None:intergenic 30.0%
ACTACAGGATTGATATATGT+TGG + chr7_2:80676850-80676869 Msa1080960:three_prime_UTR 30.0%
ACATAAATGCATGGAAAGTT+CGG - chr7_2:80676904-80676923 None:intergenic 30.0%
! CAATATTGGTCTATGATTCA+AGG - chr7_2:80676977-80676996 None:intergenic 30.0%
AACTGAATTTGGACAGAGAA+AGG - chr7_2:80672902-80672921 None:intergenic 35.0%
GTCCAAATTCAGTTAACTAG+TGG + chr7_2:80672908-80672927 Msa1080960:five_prime_UTR 35.0%
AGCCACTAGTTAACTGAATT+TGG - chr7_2:80672913-80672932 None:intergenic 35.0%
! GCATAACTTTGACTTTCTGA+TGG + chr7_2:80673048-80673067 Msa1080960:five_prime_UTR 35.0%
! AACTTTGACTTTCTGATGGA+AGG + chr7_2:80673052-80673071 Msa1080960:five_prime_UTR 35.0%
ATATTGTGCAATATAGGGAG+AGG + chr7_2:80673123-80673142 Msa1080960:CDS 35.0%
TCTCTGATTGTGAAGAATGA+TGG - chr7_2:80673220-80673239 None:intergenic 35.0%
TCATTCTTCACAATCAGAGA+TGG + chr7_2:80673220-80673239 Msa1080960:CDS 35.0%
TTCACAATCAGAGATGGAAT+TGG + chr7_2:80673226-80673245 Msa1080960:CDS 35.0%
CTTCTTTCGACAGTTAAAAC+AGG + chr7_2:80673650-80673669 Msa1080960:intron 35.0%
ACAGTTAAAACAGGATAACG+AGG + chr7_2:80673659-80673678 Msa1080960:intron 35.0%
CTTATTGAAGGCTATGTAGA+TGG + chr7_2:80673735-80673754 Msa1080960:CDS 35.0%
CATGAATATCTATGTAAGGG+TGG + chr7_2:80674035-80674054 Msa1080960:intron 35.0%
! CACAATTTTCATTTCTCAGG+TGG + chr7_2:80674163-80674182 Msa1080960:intron 35.0%
AAAGTAGGAACAGTAAACTG+TGG - chr7_2:80674189-80674208 None:intergenic 35.0%
! GATGCAGTAACTTTGAAAGT+AGG - chr7_2:80674204-80674223 None:intergenic 35.0%
ATGGCGAGTGAGATTAAAAT+GGG - chr7_2:80674308-80674327 None:intergenic 35.0%
TATGGCGAGTGAGATTAAAA+TGG - chr7_2:80674309-80674328 None:intergenic 35.0%
GGGAGGTTATGTTATACAAA+AGG + chr7_2:80674689-80674708 Msa1080960:CDS 35.0%
CTCAAACATTAGTAGTAGCT+TGG + chr7_2:80674758-80674777 Msa1080960:intron 35.0%
AACATTAGTAGTAGCTTGGA+AGG + chr7_2:80674762-80674781 Msa1080960:intron 35.0%
CCGAAGAAGTTAAATAACCA+AGG - chr7_2:80674863-80674882 None:intergenic 35.0%
! GTCAAATTTTGTAGGGCAAT+AGG + chr7_2:80674994-80675013 Msa1080960:intron 35.0%
TGGTTTCAGACTTTATCAGA+AGG + chr7_2:80675089-80675108 Msa1080960:CDS 35.0%
AACATACAACAAGTCAGTCA+AGG - chr7_2:80675255-80675274 None:intergenic 35.0%
TACCGATGAATCAAATGCTA+TGG + chr7_2:80675298-80675317 Msa1080960:CDS 35.0%
TGAATCAAATGCTATGGATG+AGG + chr7_2:80675304-80675323 Msa1080960:CDS 35.0%
TTGGGTGAAAAATATGTCTC+GGG + chr7_2:80675388-80675407 Msa1080960:CDS 35.0%
AGAGATTGTACAAAGTGAGA+AGG + chr7_2:80675472-80675491 Msa1080960:CDS 35.0%
AAAAGATGTATCACCTTCCT+CGG - chr7_2:80675525-80675544 None:intergenic 35.0%
GATGTATTGCTTTCCTCAAA+TGG - chr7_2:80675665-80675684 None:intergenic 35.0%
AGTAAATGACATTTCAGTCG+GGG + chr7_2:80675793-80675812 Msa1080960:CDS 35.0%
! CGACAATCTCACAATTCTTT+TGG - chr7_2:80675847-80675866 None:intergenic 35.0%
! CTGACATCATTTTCAACAGA+TGG - chr7_2:80676175-80676194 None:intergenic 35.0%
ATCTCGAAATCCAAAACTTC+AGG + chr7_2:80676239-80676258 Msa1080960:intron 35.0%
! GTTAGACTTACCTGAAGTTT+TGG - chr7_2:80676252-80676271 None:intergenic 35.0%
TATTTCCTTTCGGTTCATTC+AGG + chr7_2:80676516-80676535 Msa1080960:intron 35.0%
!! GCTTGTTATCAGATATTGTC+TGG - chr7_2:80676679-80676698 None:intergenic 35.0%
TACCAAAACAGCTAAACAAG+AGG + chr7_2:80676729-80676748 Msa1080960:CDS 35.0%
!! TTCCTCTTGTTTAGCTGTTT+TGG - chr7_2:80676734-80676753 None:intergenic 35.0%
AAGCCTTGACAATTTACTAC+AGG + chr7_2:80676835-80676854 Msa1080960:three_prime_UTR 35.0%
ACTCACTTCACATAAATGCA+TGG - chr7_2:80676913-80676932 None:intergenic 35.0%
! GGTGTGAACAGAAACCTTTT+AGG + chr7_2:80672951-80672970 Msa1080960:five_prime_UTR 40.0%
CAATCAGAGATGGAATTGGA+AGG + chr7_2:80673230-80673249 Msa1080960:CDS 40.0%
TTAGCACATCAAGGACTGAT+TGG + chr7_2:80673427-80673446 Msa1080960:CDS 40.0%
TCAAGGACTGATTGGAAAGT+AGG + chr7_2:80673435-80673454 Msa1080960:intron 40.0%
TGCATCTGATTGTTTGCAGA+AGG + chr7_2:80674218-80674237 Msa1080960:CDS 40.0%
TGATGTGATTCCTGAAGCAA+AGG + chr7_2:80674644-80674663 Msa1080960:CDS 40.0%
GATGTGATTCCTGAAGCAAA+GGG + chr7_2:80674645-80674664 Msa1080960:CDS 40.0%
!! GTGAGAATTGATTTGTTGGG+AGG + chr7_2:80674672-80674691 Msa1080960:CDS 40.0%
CTTTCATTGGGTTTGAACCT+TGG + chr7_2:80674843-80674862 Msa1080960:intron 40.0%
TTGTAGGGCAATAGGGAATT+TGG + chr7_2:80675002-80675021 Msa1080960:intron 40.0%
AGGGAATTTGGATATCAAGC+TGG + chr7_2:80675014-80675033 Msa1080960:CDS 40.0%
ACAGCCTATAACAACACCAA+GGG - chr7_2:80675194-80675213 None:intergenic 40.0%
TACAGCCTATAACAACACCA+AGG - chr7_2:80675195-80675214 None:intergenic 40.0%
!! GCTGTAGCTTCTAAGATGAA+CGG + chr7_2:80675209-80675228 Msa1080960:CDS 40.0%
ATGAACGGCGACAAAGAATT+CGG + chr7_2:80675224-80675243 Msa1080960:CDS 40.0%
! CTTTTGTACTACATGGCAGT+AGG + chr7_2:80675540-80675559 Msa1080960:CDS 40.0%
AGTACACGACATTCCATTTG+AGG + chr7_2:80675649-80675668 Msa1080960:CDS 40.0%
GAAAATGATGTCAGTGCCAA+AGG + chr7_2:80676181-80676200 Msa1080960:intron 40.0%
!! TACAAAGCAGTTTTGTGAGG+TGG - chr7_2:80676276-80676295 None:intergenic 40.0%
!! CCTTACAAAGCAGTTTTGTG+AGG - chr7_2:80676279-80676298 None:intergenic 40.0%
CCTCACAAAACTGCTTTGTA+AGG + chr7_2:80676276-80676295 Msa1080960:intron 40.0%
CAAAACTGCTTTGTAAGGTG+AGG + chr7_2:80676281-80676300 Msa1080960:intron 40.0%
!! TCAATCTGGCTTGCTTCAAT+TGG - chr7_2:80676623-80676642 None:intergenic 40.0%
! ACCAGTGTTGTTCCTTGTTT+GGG + chr7_2:80676873-80676892 Msa1080960:three_prime_UTR 40.0%
ATGAGTCTTAGGTGTGTCAA+AGG + chr7_2:80677070-80677089 Msa1080960:three_prime_UTR 40.0%
TGTGCAATATAGGGAGAGGT+TGG + chr7_2:80673127-80673146 Msa1080960:CDS 45.0%
AGTGCTTCTGCAGATGAAAG+TGG + chr7_2:80673399-80673418 Msa1080960:CDS 45.0%
GTGGAGGATTTAGCACATCA+AGG + chr7_2:80673418-80673437 Msa1080960:CDS 45.0%
TTCCGCGTTATGTATCGTGA+AGG + chr7_2:80673684-80673703 Msa1080960:CDS 45.0%
GTCCTTCACGATACATAACG+CGG - chr7_2:80673689-80673708 None:intergenic 45.0%
TATGTATCGTGAAGGACCAG+AGG + chr7_2:80673692-80673711 Msa1080960:CDS 45.0%
ATGTATCGTGAAGGACCAGA+GGG + chr7_2:80673693-80673712 Msa1080960:CDS 45.0%
GTATTATAGGGAGTTCCCTC+TGG - chr7_2:80673711-80673730 None:intergenic 45.0%
GTAGATGGACCTGTTGATGT+TGG + chr7_2:80673750-80673769 Msa1080960:CDS 45.0%
TGTGACTGACCAACATCAAC+AGG - chr7_2:80673762-80673781 None:intergenic 45.0%
! TGACAGCTTTATGCGTCTCA+TGG + chr7_2:80673887-80673906 Msa1080960:intron 45.0%
! GACAGCTTTATGCGTCTCAT+GGG + chr7_2:80673888-80673907 Msa1080960:intron 45.0%
!! GTGCTATTTGTTCTCCAGTC+TGG - chr7_2:80674245-80674264 None:intergenic 45.0%
AAGAAAGGATGAAGCCTCCA+TGG + chr7_2:80674374-80674393 Msa1080960:intron 45.0%
TCAAGGCAACTTATTGGCAG+TGG + chr7_2:80675069-80675088 Msa1080960:CDS 45.0%
CTTTGACTAAGCTCTTCAGC+AGG - chr7_2:80675359-80675378 None:intergenic 45.0%
GGTGAAAAATATGTCTCGGG+AGG + chr7_2:80675391-80675410 Msa1080960:CDS 45.0%
AGTGCATGACATTTCAACCG+AGG + chr7_2:80675505-80675524 Msa1080960:CDS 45.0%
CATGACATTTCAACCGAGGA+AGG + chr7_2:80675509-80675528 Msa1080960:CDS 45.0%
GAGATCGCAGAAGCAGATAT+TGG + chr7_2:80675737-80675756 Msa1080960:CDS 45.0%
AATACGGATTTCGTTCACGC+AGG + chr7_2:80676065-80676084 Msa1080960:CDS 45.0%
! TATGTTGCTGCTTGGTCCTT+TGG - chr7_2:80676200-80676219 None:intergenic 45.0%
GACCAAGCAGCAACATACTA+CGG + chr7_2:80676203-80676222 Msa1080960:intron 45.0%
ACCAAGCAGCAACATACTAC+GGG + chr7_2:80676204-80676223 Msa1080960:intron 45.0%
AGGAGCAGATCTTAGCATGA+AGG + chr7_2:80676544-80676563 Msa1080960:CDS 45.0%
GGTACATCTGAAGACATGTC+TGG - chr7_2:80676713-80676732 None:intergenic 45.0%
! GACCAGTGTTGTTCCTTGTT+TGG + chr7_2:80676872-80676891 Msa1080960:three_prime_UTR 45.0%
! CCAGTGTTGTTCCTTGTTTG+GGG + chr7_2:80676874-80676893 Msa1080960:three_prime_UTR 45.0%
AGTTCGGAAAACCCCAAACA+AGG - chr7_2:80676888-80676907 None:intergenic 45.0%
GCTTCTGCAGATGAAAGTGG+AGG + chr7_2:80673402-80673421 Msa1080960:CDS 50.0%
TGTTTGCAGAAGGTCCAGAC+TGG + chr7_2:80674228-80674247 Msa1080960:CDS 50.0%
TCCATGGCCACTGTCTACAA+GGG + chr7_2:80674390-80674409 Msa1080960:CDS 50.0%
CTCACAACACCCTTTGCTTC+AGG - chr7_2:80674657-80674676 None:intergenic 50.0%
TTCTGACACTAACCAGCCCT+TGG + chr7_2:80675175-80675194 Msa1080960:intron 50.0%
CCTATAACAACACCAAGGGC+TGG - chr7_2:80675190-80675209 None:intergenic 50.0%
!! CCAGCCCTTGGTGTTGTTAT+AGG + chr7_2:80675187-80675206 Msa1080960:intron 50.0%
TCCCGTAGTATGTTGCTGCT+TGG - chr7_2:80676208-80676227 None:intergenic 50.0%
GTGTGCCTGAATGAACCGAA+AGG - chr7_2:80676524-80676543 None:intergenic 50.0%
TTCGGTTCATTCAGGCACAC+AGG + chr7_2:80676524-80676543 Msa1080960:intron 50.0%
CCCCAAACAAGGAACAACAC+TGG - chr7_2:80676877-80676896 None:intergenic 50.0%
CTTGTAGACAGTGGCCATGG+AGG - chr7_2:80674391-80674410 None:intergenic 55.0%
CTCCATGGCCACTGTCTACA+AGG + chr7_2:80674389-80674408 Msa1080960:CDS 55.0%
TCCCTTGTAGACAGTGGCCA+TGG - chr7_2:80674394-80674413 None:intergenic 55.0%
ATGGCCACTGTCTACAAGGG+AGG + chr7_2:80674393-80674412 Msa1080960:CDS 55.0%
ACAGCCTCCCTTGTAGACAG+TGG - chr7_2:80674400-80674419 None:intergenic 55.0%
CGGCGACAAAGAATTCGGCA+AGG + chr7_2:80675229-80675248 Msa1080960:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 80672851 80677103 80672851 ID=Msa1080960;Name=Msa1080960
chr7_2 mRNA 80672851 80677103 80672851 ID=Msa1080960-mRNA-1;Parent=Msa1080960;Name=Msa1080960-mRNA-1;_AED=0.13;_eAED=0.13;_QI=256|0.88|0.9|1|1|1|10|319|655
chr7_2 exon 80672851 80673251 80672851 ID=Msa1080960-mRNA-1:exon:20452;Parent=Msa1080960-mRNA-1
chr7_2 exon 80673337 80673452 80673337 ID=Msa1080960-mRNA-1:exon:20453;Parent=Msa1080960-mRNA-1
chr7_2 exon 80673663 80673771 80673663 ID=Msa1080960-mRNA-1:exon:20454;Parent=Msa1080960-mRNA-1
chr7_2 exon 80673893 80673932 80673893 ID=Msa1080960-mRNA-1:exon:20455;Parent=Msa1080960-mRNA-1
chr7_2 exon 80674182 80674271 80674182 ID=Msa1080960-mRNA-1:exon:20456;Parent=Msa1080960-mRNA-1
chr7_2 exon 80674381 80674480 80674381 ID=Msa1080960-mRNA-1:exon:20457;Parent=Msa1080960-mRNA-1
chr7_2 exon 80674597 80674736 80674597 ID=Msa1080960-mRNA-1:exon:20458;Parent=Msa1080960-mRNA-1
chr7_2 exon 80675008 80675110 80675008 ID=Msa1080960-mRNA-1:exon:20459;Parent=Msa1080960-mRNA-1
chr7_2 exon 80675209 80676086 80675209 ID=Msa1080960-mRNA-1:exon:20460;Parent=Msa1080960-mRNA-1
chr7_2 exon 80676538 80677103 80676538 ID=Msa1080960-mRNA-1:exon:20461;Parent=Msa1080960-mRNA-1
chr7_2 five_prime_UTR 80672851 80673106 80672851 ID=Msa1080960-mRNA-1:five_prime_utr;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80673107 80673251 80673107 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80673337 80673452 80673337 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80673663 80673771 80673663 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80673893 80673932 80673893 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80674182 80674271 80674182 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80674381 80674480 80674381 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80674597 80674736 80674597 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80675008 80675110 80675008 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80675209 80676086 80675209 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 CDS 80676538 80676784 80676538 ID=Msa1080960-mRNA-1:cds;Parent=Msa1080960-mRNA-1
chr7_2 three_prime_UTR 80676785 80677103 80676785 ID=Msa1080960-mRNA-1:three_prime_utr;Parent=Msa1080960-mRNA-1
Gene Sequence

>Msa1080960

ATGGACAAAAGGAAAAATATTGTGCAATATAGGGAGAGGTTGGATAACACTCTTACCTCATTTGATCTTACAAATTATGAGAAACTCAAAACTCTTGTCAAAAGTCAACTCCATCATTCTTCACAATCAGAGATGGAATTGGAAGGATATGAGGAGAAACTAGAAATTAAGACTGCTGAGTTATCAAACTTTCTTGATATGATGAGAAGTGCTTCTGCAGATGAAAGTGGAGGATTTAGCACATCAAGGACTGATTGGAAATTAAAACAGGATAACGAGGAATTCCGCGTTATGTATCGTGAAGGACCAGAGGGAACTCCCTATAATACATTGCTTATTGAAGGCTATGTAGATGGACCTGTTGATGTTGCTTTATGCGTCTCATGGGAATCATCCCTTTATAAGAAATGGTGGCCACAGTTTACTGTTCCTACTTTCAAAGTTACTGCATCTGATTGTTTGCAGAAGGTCCAGACTGGAGAACAAATAGCACTAATAAGGATGAAGCCTCCATGGCCACTGTCTACAAGGGAGGCTGTAGCGCATTATTATCTGTTTGAGTACATTCAAGATGACTTGATAGTAGTTCTTTTGAAAACGGTCACTGAGTCAGAGAAAATTAATGAGACTATTGATGGCTTCAGCAATGATGTGATTCCTGAAGCAAAGGGTGTTGTGAGAATTGATTTGTTGGGAGGTTATGTTATACAAAAGGTGACATCTGAAAGAAGTTATTTCCGGGCAATAGGGAATTTGGATATCAAGCTGGATTTTATGCCTCCATCCCTTATAAATTTCATTTCAAGGCAACTTATTGGCAGTGGTTTCAGACTTTATCAGAAGGCTGTAGCTTCTAAGATGAACGGCGACAAAGAATTCGGCAAGGCCTTGACTGACTTGTTGTATGTTAGAATTCGTGAAGCTCTATACAATACCGATGAATCAAATGCTATGGATGAGGACGAGCTTAAGCAAGTTGCAAGCATTTTTCCTGCTGAAGAGCTTAGTCAAAGTAAGCAAGATTGGGTGAAAAATATGTCTCGGGAGGATAGAAGCAACCAAAATGCAAATAATTACAATGGTGAGATTTTAGATACAGGTAGTGAAGAGATTGTACAAAGTGAGAAGGATTTCAAGAAAGTGCATGACATTTCAACCGAGGAAGGTGATACATCTTTTGTACTACATGGCAGTAGGAATTGTGAGATTGTCAACGCAGACAGTGAAGAGATTGTAGAAGAAAATATTGAAGAGATTGTACAAATTGAGAAGGATGTCAAGAAAGTACACGACATTCCATTTGAGGAAAGCAATACATCTTTTGTACTAAAAGGAAATAGTAACTGTGAGATTGTAGATGCAGATAGAGAAGAGATCGCAGAAGCAGATATTGGAGAGATTGTACAAATTGAAAAGAATGTAAAGAAAGTAAATGACATTTCAGTCGGGGAAGTTGATACATCTATTGTGCTAAAGGGCCAAAAGAATTGTGAGATTGTCGACGCAGATAGTGAAGAGACCATAGAAGCAAATATTGAAGATATTGTACAAATTGAAAAGGATGTGAATAAAGAACATGACGTTTCAATTGAATATGATAATATAAGAGGTGTATTGAAGAGAAAGAGTAATGTATATATCAGCTCAAATGTAAAACAGGCTTTAGAAACATTAGAAAGGGCTATTTCATCAGTTCAGAAATACGGATTTCGTTCACGCAGGCACACAGGAGCAGATCTTAGCATGAAGGAAGTAAATTACAACAAAATAGCACCGGATTTCTCAAATCAGAATCACTTGAGACCAATTGAAGCAAGCCAGATTGATTCATATTCATTGAAAAATGAAACAACGCTGAACCAGACAATATCTGATAACAAGCAATATACAAGACCAGACATGTCTTCAGATGTACCAAAACAGCTAAACAAGAGGAAAAATTATAGATACTGTTGTTTTATGCATTAG

Protein sequence

>Msa1080960

MDKRKNIVQYRERLDNTLTSFDLTNYEKLKTLVKSQLHHSSQSEMELEGYEEKLEIKTAELSNFLDMMRSASADESGGFSTSRTDWKLKQDNEEFRVMYREGPEGTPYNTLLIEGYVDGPVDVALCVSWESSLYKKWWPQFTVPTFKVTASDCLQKVQTGEQIALIRMKPPWPLSTREAVAHYYLFEYIQDDLIVVLLKTVTESEKINETIDGFSNDVIPEAKGVVRIDLLGGYVIQKVTSERSYFRAIGNLDIKLDFMPPSLINFISRQLIGSGFRLYQKAVASKMNGDKEFGKALTDLLYVRIREALYNTDESNAMDEDELKQVASIFPAEELSQSKQDWVKNMSREDRSNQNANNYNGEILDTGSEEIVQSEKDFKKVHDISTEEGDTSFVLHGSRNCEIVNADSEEIVEENIEEIVQIEKDVKKVHDIPFEESNTSFVLKGNSNCEIVDADREEIAEADIGEIVQIEKNVKKVNDISVGEVDTSIVLKGQKNCEIVDADSEETIEANIEDIVQIEKDVNKEHDVSIEYDNIRGVLKRKSNVYISSNVKQALETLERAISSVQKYGFRSRRHTGADLSMKEVNYNKIAPDFSNQNHLRPIEASQIDSYSLKNETTLNQTISDNKQYTRPDMSSDVPKQLNKRKNYRYCCFMH*