Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799070 | XP_003611986.1 | 99.681 | 627 | 1 | 1 | 1 | 627 | 1 | 626 | 0.0 | 1301 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799070 | sp|O82663|SDHA1_ARATH | 88.959 | 634 | 63 | 2 | 1 | 627 | 1 | 634 | 0.0 | 1159 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799070 | G7KDJ3 | 99.681 | 627 | 1 | 1 | 1 | 627 | 1 | 626 | 0.0 | 1301 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0058610 | Msa0799070 | 0.811096 | 8.303473e-51 | -8.615850e-47 |
Msa0092440 | Msa0799070 | 0.805518 | 1.284261e-49 | -8.615850e-47 |
Msa0621240 | Msa0799070 | 0.834779 | 2.460326e-56 | -8.615850e-47 |
Msa0626850 | Msa0799070 | 0.829724 | 4.385369e-55 | -8.615850e-47 |
Msa0664970 | Msa0799070 | 0.804024 | 2.633938e-49 | -8.615850e-47 |
Msa0696420 | Msa0799070 | 0.810669 | 1.027399e-50 | -8.615850e-47 |
Msa0716500 | Msa0799070 | 0.988524 | 2.349414e-174 | -8.615850e-47 |
Msa0757720 | Msa0799070 | 0.926824 | 2.755072e-91 | -8.615850e-47 |
Msa0799070 | Msa0828660 | 0.815978 | 7.005504e-52 | -8.615850e-47 |
Msa0799070 | Msa0837480 | 0.990930 | 4.958646e-185 | -8.615850e-47 |
Msa0799070 | Msa1036740 | 0.817392 | 3.376790e-52 | -8.615850e-47 |
Msa0799070 | Msa1095790 | 0.808924 | 2.438105e-50 | -8.615850e-47 |
Msa0799070 | Msa1127430 | 0.801210 | 1.002529e-48 | -8.615850e-47 |
Msa0799070 | Msa1163870 | 0.803718 | 3.049226e-49 | -8.615850e-47 |
Msa0799070 | Msa1174310 | 0.805893 | 1.071463e-49 | -8.615850e-47 |
Msa0799070 | Msa1205480 | 0.817355 | 3.442456e-52 | -8.615850e-47 |
Msa0799070 | Msa1229610 | 0.821086 | 4.866797e-53 | -8.615850e-47 |
Msa0799070 | Msa1272320 | 0.834416 | 3.036148e-56 | -8.615850e-47 |
Msa0799070 | Msa1332030 | -0.806251 | 9.006962e-50 | -8.615850e-47 |
Msa0799070 | Msa1426910 | 0.821174 | 4.645945e-53 | -8.615850e-47 |
Msa0144620 | Msa0799070 | 0.812816 | 3.504421e-51 | -8.615850e-47 |
Msa0171980 | Msa0799070 | 0.820873 | 5.448061e-53 | -8.615850e-47 |
Msa0189610 | Msa0799070 | 0.815618 | 8.431309e-52 | -8.615850e-47 |
Msa0194720 | Msa0799070 | 0.827669 | 1.377134e-54 | -8.615850e-47 |
Msa0236740 | Msa0799070 | 0.828824 | 7.253544e-55 | -8.615850e-47 |
Msa0269520 | Msa0799070 | 0.804871 | 1.754083e-49 | -8.615850e-47 |
Msa0301170 | Msa0799070 | 0.800168 | 1.635722e-48 | -8.615850e-47 |
Msa0304100 | Msa0799070 | 0.820271 | 7.489945e-53 | -8.615850e-47 |
Msa0319290 | Msa0799070 | 0.827518 | 1.496603e-54 | -8.615850e-47 |
Msa0534410 | Msa0799070 | 0.817531 | 3.142842e-52 | -8.615850e-47 |
Msa0582280 | Msa0799070 | 0.846913 | 1.611264e-59 | -8.615850e-47 |
Msa0585620 | Msa0799070 | -0.814950 | 1.186878e-51 | -8.615850e-47 |
Msa0587030 | Msa0799070 | 0.806879 | 6.638717e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799070 | MtrunA17_Chr5g0403941 | 99.681 | 627 | 1 | 1 | 1 | 627 | 1 | 626 | 0.0 | 1301 |
Msa0799070 | MtrunA17_Chr6g0450691 | 33.622 | 577 | 311 | 18 | 43 | 589 | 122 | 656 | 9.01e-79 | 263 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0799070 | AT5G66760.1 | 88.959 | 634 | 63 | 2 | 1 | 627 | 1 | 634 | 0.0 | 1159 |
Msa0799070 | AT2G18450.1 | 86.478 | 636 | 73 | 3 | 1 | 627 | 1 | 632 | 0.0 | 1125 |
Msa0799070 | AT5G14760.1 | 33.116 | 613 | 340 | 16 | 5 | 587 | 47 | 619 | 1.64e-80 | 267 |
Find 195 sgRNAs with CRISPR-Local
Find 620 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAGCTGCTTCAACAATTT+TGG | 0.104747 | 5_3:+12137146 | Msa0799070:CDS |
TCAATTGGTAACTTCTATTT+TGG | 0.171188 | 5_3:-12142755 | None:intergenic |
GGTTCCATCCTCCATGTTTA+AGG | 0.207924 | 5_3:-12137112 | None:intergenic |
CCATCCTCTGTTCGAGAAAA+AGG | 0.221341 | 5_3:-12136600 | None:intergenic |
GGAACAAAATAACACAAATA+TGG | 0.234117 | 5_3:+12142796 | Msa0799070:three_prime_UTR |
ATGCAGGTGGTTACCATTAA+AGG | 0.242612 | 5_3:+12139239 | Msa0799070:intron |
CCAGTGATCTTAAATCTATT+TGG | 0.246111 | 5_3:-12142834 | None:intergenic |
ACTACCAACCTTCTGTTATA+AGG | 0.253374 | 5_3:-12137504 | None:intergenic |
GTTATTGAACTAGAGAATTA+TGG | 0.259298 | 5_3:+12136573 | Msa0799070:CDS |
ATGAGATCCGAGAGAGTTAT+TGG | 0.260994 | 5_3:-12134426 | None:intergenic |
GTGCTTCCCTACACATATAT+TGG | 0.266901 | 5_3:-12136542 | None:intergenic |
ATCTGGATCGTCTCCTTTAA+TGG | 0.276389 | 5_3:-12139252 | None:intergenic |
GCTTTATTGCACACTCTCTA+TGG | 0.278962 | 5_3:+12136806 | Msa0799070:CDS |
AGTCTCTCCTTGAGCACATC+TGG | 0.288142 | 5_3:-12138375 | None:intergenic |
TTTCACCCAACGGGTATATA+TGG | 0.289741 | 5_3:+12137472 | Msa0799070:CDS |
AATGCCATGGCTGCCCGTGC+TGG | 0.295116 | 5_3:+12137320 | Msa0799070:CDS |
ACTTGGTGCAAATTCACTTT+TGG | 0.296486 | 5_3:+12139340 | Msa0799070:CDS |
TCTAGTTCAATAACCGCTTT+TGG | 0.311115 | 5_3:-12136564 | None:intergenic |
GCATGCGCTGCTGATCGAAC+TGG | 0.312280 | 5_3:+12136779 | Msa0799070:CDS |
AGAAGGTCCGATTGGATTAC+AGG | 0.320125 | 5_3:+12142361 | Msa0799070:CDS |
GTATCGTGGCTTCGGGAAAA+TGG | 0.328117 | 5_3:-12134216 | None:intergenic |
GAGGGTTGGTATCGTGGCTT+CGG | 0.340574 | 5_3:-12134224 | None:intergenic |
GTGCTCAAGGAGAGACTTCC+TGG | 0.346533 | 5_3:+12138381 | Msa0799070:CDS |
AAGAGCTGCTATTGGACTTT+CGG | 0.349573 | 5_3:+12134645 | Msa0799070:CDS |
TACCTACACCACGTCCTTCC+CGG | 0.354952 | 5_3:-12137761 | None:intergenic |
ACTATTCATTATAAGATCTA+AGG | 0.357085 | 5_3:-12136873 | None:intergenic |
TTTATTCTGCACCAGGGTTA+TGG | 0.364339 | 5_3:+12137248 | Msa0799070:intron |
GAACAAAATAACACAAATAT+GGG | 0.366338 | 5_3:+12142797 | Msa0799070:three_prime_UTR |
GTTCCTGGATTGATGGCTGC+TGG | 0.366625 | 5_3:+12139281 | Msa0799070:CDS |
TTGAAGACAGAAGTTTGATA+TGG | 0.374329 | 5_3:+12139816 | Msa0799070:CDS |
TAATGCACAGTTGGCAAAAC+AGG | 0.377034 | 5_3:-12138459 | None:intergenic |
GTCTCTCCTTGAGCACATCT+GGG | 0.382428 | 5_3:-12138374 | None:intergenic |
TTTATTTATGTTGTGAGGGT+TGG | 0.383445 | 5_3:-12134238 | None:intergenic |
AGAATATATCAGCGTGCATT+TGG | 0.386840 | 5_3:+12136624 | Msa0799070:CDS |
GTGGTAGGTGCTGGTGGTGC+TGG | 0.389745 | 5_3:+12134619 | Msa0799070:CDS |
AGGGTTGGTATCGTGGCTTC+GGG | 0.396270 | 5_3:-12134223 | None:intergenic |
TGCATTAGTTCCTGGATTGA+TGG | 0.400952 | 5_3:+12139274 | Msa0799070:CDS |
ACACAACTTTATCTAGAAGT+TGG | 0.406936 | 5_3:-12142868 | None:intergenic |
CTTCTAATGTTTCTTGTGTA+CGG | 0.411591 | 5_3:-12139647 | None:intergenic |
CCAGAAAACGATTGCATGGC+TGG | 0.413440 | 5_3:+12139536 | Msa0799070:CDS |
GATCCAGATGCATTAGTTCC+TGG | 0.418490 | 5_3:+12139266 | Msa0799070:CDS |
AATCCAGGAACTAATGCATC+TGG | 0.422975 | 5_3:-12139269 | None:intergenic |
CCAAAATTGTTGAAGCAGCT+TGG | 0.423552 | 5_3:-12137146 | None:intergenic |
CACAACTTTATCTAGAAGTT+GGG | 0.424714 | 5_3:-12142867 | None:intergenic |
AAGTGGATGAAACACACTTT+GGG | 0.427082 | 5_3:+12140155 | Msa0799070:CDS |
TGGCCAGCATCCTTCTCTAA+AGG | 0.427404 | 5_3:-12139516 | None:intergenic |
ATGGCTGCCCGTGCTGGGAT+CGG | 0.429577 | 5_3:+12137326 | Msa0799070:CDS |
ATGCCATGGCTGCCCGTGCT+GGG | 0.436921 | 5_3:+12137321 | Msa0799070:CDS |
TGTCTTCAACCTTGACATCA+TGG | 0.438871 | 5_3:-12139802 | None:intergenic |
GGTGGTCAGAGCTTAAACTT+TGG | 0.442230 | 5_3:+12136645 | Msa0799070:CDS |
TTATTGTACACTGTATGTTC+AGG | 0.442771 | 5_3:+12142687 | Msa0799070:three_prime_UTR |
GATCGATGACTATGGAGATC+CGG | 0.443198 | 5_3:+12137742 | Msa0799070:CDS |
TTCCTGGATTGATGGCTGCT+GGG | 0.444126 | 5_3:+12139282 | Msa0799070:CDS |
CATGCGCTGCTGATCGAACT+GGG | 0.444697 | 5_3:+12136780 | Msa0799070:CDS |
TGTGTTAATTTGCAGATTCT+GGG | 0.444739 | 5_3:+12142332 | Msa0799070:intron |
GCTGGATTAAGAGCTGCTAT+TGG | 0.445704 | 5_3:+12134637 | Msa0799070:CDS |
TTCACACACTGTTGCAGCTC+AGG | 0.452239 | 5_3:+12134714 | Msa0799070:CDS |
GCAGCCTGTGCATCAGTTCA+TGG | 0.461706 | 5_3:+12139308 | Msa0799070:CDS |
AAGCAGCTTGGAAACGATGC+AGG | 0.464061 | 5_3:-12137134 | None:intergenic |
TCTATAATCTACAGGAGATC+AGG | 0.468646 | 5_3:+12136512 | Msa0799070:intron |
ATAGAAGTTACCAATTGAAA+AGG | 0.468824 | 5_3:+12142760 | Msa0799070:three_prime_UTR |
CAGAGCTTAAACTTTGGAAA+AGG | 0.469151 | 5_3:+12136651 | Msa0799070:CDS |
CACAGTTGGCAAAACAGGAA+TGG | 0.470405 | 5_3:-12138454 | None:intergenic |
AGTTTCAAGATCGATGACTA+TGG | 0.471006 | 5_3:+12137734 | Msa0799070:CDS |
TATTAATACACACGAGCCTT+AGG | 0.475211 | 5_3:-12142429 | None:intergenic |
GCTATTGGACTTTCGGAACA+TGG | 0.480369 | 5_3:+12134652 | Msa0799070:CDS |
CCAAATAGATTTAAGATCAC+TGG | 0.484810 | 5_3:+12142834 | Msa0799070:three_prime_UTR |
ATCGATGACTATGGAGATCC+GGG | 0.485790 | 5_3:+12137743 | Msa0799070:CDS |
TGAAAAGGTTAAATGAGAAT+CGG | 0.486548 | 5_3:+12142775 | Msa0799070:three_prime_UTR |
GACAAATTGAGAAATTCAAA+TGG | 0.487335 | 5_3:+12139558 | Msa0799070:CDS |
TCATGCCCGTGAGGACTTCA+CGG | 0.503927 | 5_3:+12140034 | Msa0799070:CDS |
GTGGTGAAGGTGGAATTCTT+AGG | 0.505148 | 5_3:+12137643 | Msa0799070:CDS |
TCCCCAGCAGCCATCAATCC+AGG | 0.505507 | 5_3:-12139284 | None:intergenic |
ACAGTTGGCAAAACAGGAAT+GGG | 0.508684 | 5_3:-12138453 | None:intergenic |
TGTTTAAGGCAATCACTCCT+TGG | 0.510690 | 5_3:-12137098 | None:intergenic |
CGATCTTGAAACTACATCTC+GGG | 0.511202 | 5_3:-12137724 | None:intergenic |
GGGTGGCATAAATGCTGCAT+TGG | 0.511697 | 5_3:+12136082 | Msa0799070:intron |
ACCTCTCCATGATGATTTGT+GGG | 0.512051 | 5_3:-12138498 | None:intergenic |
GAAGTGGATGAAACACACTT+TGG | 0.512688 | 5_3:+12140154 | Msa0799070:CDS |
AGATAGATGTGATCTTTCTC+AGG | 0.513190 | 5_3:-12138333 | None:intergenic |
TTTGTGCAATTTCACCCAAC+GGG | 0.515778 | 5_3:+12137463 | Msa0799070:CDS |
CTTGATCGAGACTATTGAGT+TGG | 0.516926 | 5_3:+12139944 | Msa0799070:CDS |
ATTGCACACTCTCTATGGCC+AGG | 0.517919 | 5_3:+12136811 | Msa0799070:CDS |
ACCTCAGCACATACATGCAC+TGG | 0.519071 | 5_3:+12137290 | Msa0799070:CDS |
GGTGGCATAAATGCTGCATT+GGG | 0.519373 | 5_3:+12136083 | Msa0799070:CDS |
TACCTCTCCATGATGATTTG+TGG | 0.520950 | 5_3:-12138499 | None:intergenic |
GTGTATTGTGTCTCATAGCC+TGG | 0.521506 | 5_3:-12136829 | None:intergenic |
CTGCTCCATATATACCCGTT+GGG | 0.522127 | 5_3:-12137477 | None:intergenic |
GGAAAATGGAAGGGAAATGA+TGG | 0.528357 | 5_3:-12134202 | None:intergenic |
GAAACAAAAGCCTTTAGAGA+AGG | 0.529387 | 5_3:+12139506 | Msa0799070:CDS |
CCCATGTTATAATGCACAGT+TGG | 0.530509 | 5_3:-12138468 | None:intergenic |
TTAATTCGAAACACGTCACT+AGG | 0.530586 | 5_3:-12134178 | None:intergenic |
CTCAAGTCCGATCCCAGCAC+GGG | 0.532597 | 5_3:-12137333 | None:intergenic |
CAATGCACTCTGCAGAAGCT+AGG | 0.534552 | 5_3:+12139994 | Msa0799070:CDS |
CCGTGCTGGGATCGGACTTG+AGG | 0.534940 | 5_3:+12137334 | Msa0799070:CDS |
TGCAGAGTGCATTGTGACGC+AGG | 0.536303 | 5_3:-12139985 | None:intergenic |
ATGTGGCGTTGCGTCGCTCG+TGG | 0.539513 | 5_3:+12134371 | Msa0799070:CDS |
GATCCCAGCACGGGCAGCCA+TGG | 0.541289 | 5_3:-12137324 | None:intergenic |
ATATATCAGCGTGCATTTGG+TGG | 0.542986 | 5_3:+12136627 | Msa0799070:CDS |
TCCTGGATTGATGGCTGCTG+GGG | 0.543390 | 5_3:+12139283 | Msa0799070:CDS |
TAGTTACTTATCGACGGCTC+GGG | 0.544038 | 5_3:+12142457 | Msa0799070:three_prime_UTR |
AACTAACCGTGAAGTCCTCA+CGG | 0.544443 | 5_3:-12140040 | None:intergenic |
GTTGCAGAAATTCATAAGCC+AGG | 0.544526 | 5_3:+12139398 | Msa0799070:CDS |
TCCAATGTATTCAAATGCAC+AGG | 0.545981 | 5_3:-12142384 | None:intergenic |
GTTCATGGTGCCAACAGACT+TGG | 0.548733 | 5_3:+12139323 | Msa0799070:CDS |
TGCCATCCAATATATGTGTA+GGG | 0.549829 | 5_3:+12136536 | Msa0799070:CDS |
TGTTTCCACTTGTGCACAAG+TGG | 0.551791 | 5_3:+12142485 | Msa0799070:three_prime_UTR |
ATGCCATCCAATATATGTGT+AGG | 0.552173 | 5_3:+12136535 | Msa0799070:CDS |
GCACAGGCCTGTAATCCAAT+CGG | 0.553394 | 5_3:-12142368 | None:intergenic |
TCGATCTTGAAACTACATCT+CGG | 0.553813 | 5_3:-12137725 | None:intergenic |
CGTGGCTTCGGGAAAATGGA+AGG | 0.554121 | 5_3:-12134212 | None:intergenic |
ACACAAGAAACATTAGAAGA+AGG | 0.555710 | 5_3:+12139651 | Msa0799070:CDS |
GGTTGAATCATTCCCTCCTA+AGG | 0.556270 | 5_3:+12142413 | Msa0799070:CDS |
GTCAATTAATTGATAAAACG+TGG | 0.556470 | 5_3:+12139771 | Msa0799070:CDS |
GAAATATGACTGAAGATGAC+TGG | 0.557787 | 5_3:+12136105 | Msa0799070:CDS |
GCCTGTGCATTTGAATACAT+TGG | 0.557956 | 5_3:+12142383 | Msa0799070:CDS |
TAATACACACGAGCCTTAGG+AGG | 0.560382 | 5_3:-12142426 | None:intergenic |
GATGCAGTTGTGGTAGGTGC+TGG | 0.560650 | 5_3:+12134610 | Msa0799070:CDS |
GGAGAACGAGAAGGTCCGAT+TGG | 0.562403 | 5_3:+12142353 | Msa0799070:CDS |
GATCAGCAGCGCATGCGCAA+CGG | 0.562643 | 5_3:-12136772 | None:intergenic |
GGCATTCCCACAAATCATCA+TGG | 0.562992 | 5_3:+12138492 | Msa0799070:CDS |
AGATCCTCCAATAACTCTCT+CGG | 0.565822 | 5_3:+12134419 | Msa0799070:CDS |
TTAGGTTCTCGTGGTGAAGG+TGG | 0.566896 | 5_3:+12137633 | Msa0799070:intron |
ATAGTTACTTATCGACGGCT+CGG | 0.568502 | 5_3:+12142456 | Msa0799070:three_prime_UTR |
TTGATTCGTCTCATTTCAAG+TGG | 0.572017 | 5_3:+12142711 | Msa0799070:three_prime_UTR |
TGAATTTGCACCAAGTCTGT+TGG | 0.572143 | 5_3:-12139333 | None:intergenic |
CCTGCTCCATATATACCCGT+TGG | 0.576795 | 5_3:-12137478 | None:intergenic |
AGACAAGAGATGATGAGAAG+TGG | 0.576847 | 5_3:+12140138 | Msa0799070:intron |
ATGGAGATCCGGGAAGGACG+TGG | 0.577137 | 5_3:+12137753 | Msa0799070:CDS |
CCAACGGGTATATATGGAGC+AGG | 0.577748 | 5_3:+12137478 | Msa0799070:CDS |
TTTGAATACATTGGATGATG+AGG | 0.579255 | 5_3:+12142392 | Msa0799070:CDS |
AAGCCTTTAGAGAAGGATGC+TGG | 0.580540 | 5_3:+12139513 | Msa0799070:CDS |
CAACAGTGTGTGAACGAGTT+GGG | 0.581861 | 5_3:-12134705 | None:intergenic |
GCACATACATGCACTGGAGA+TGG | 0.583607 | 5_3:+12137296 | Msa0799070:CDS |
GTTTGTGCAATTTCACCCAA+CGG | 0.583893 | 5_3:+12137462 | Msa0799070:CDS |
GGCACCATGAACTGATGCAC+AGG | 0.585331 | 5_3:-12139312 | None:intergenic |
GCAGGTTGCCTTATAACAGA+AGG | 0.587925 | 5_3:+12137496 | Msa0799070:CDS |
GCAGTTGTGGTAGGTGCTGG+TGG | 0.588394 | 5_3:+12134613 | Msa0799070:CDS |
GGAGAGTTTCCATGATGTCA+AGG | 0.594515 | 5_3:+12139793 | Msa0799070:CDS |
ACACTGTCAAAGGAAGTGAT+TGG | 0.595632 | 5_3:+12136144 | Msa0799070:CDS |
TGTTGTGAGGGTTGGTATCG+TGG | 0.596720 | 5_3:-12134230 | None:intergenic |
ATGATATAGTTACTTATCGA+CGG | 0.598006 | 5_3:+12142451 | Msa0799070:three_prime_UTR |
TTCCCTACACATATATTGGA+TGG | 0.601606 | 5_3:-12136538 | None:intergenic |
CAGATTCTGGGAGAACGAGA+AGG | 0.601740 | 5_3:+12142344 | Msa0799070:intron |
GCCAACTGTGCATTATAACA+TGG | 0.602535 | 5_3:+12138467 | Msa0799070:CDS |
GATCTTATAATGAATAGTGA+TGG | 0.605150 | 5_3:+12136878 | Msa0799070:CDS |
AGGAGTGATTGCCTTAAACA+TGG | 0.608685 | 5_3:+12137101 | Msa0799070:CDS |
GATGCAAGATCCTTTGCTGT+AGG | 0.609186 | 5_3:-12137702 | None:intergenic |
TCAATTAATTGATAAAACGT+GGG | 0.614071 | 5_3:+12139772 | Msa0799070:CDS |
TGCTGGTGTGGATGTTACAA+AGG | 0.614475 | 5_3:+12138428 | Msa0799070:CDS |
CACATGTACGACACTGTCAA+AGG | 0.616446 | 5_3:+12136134 | Msa0799070:CDS |
ATTGCCTTAAACATGGAGGA+TGG | 0.617847 | 5_3:+12137108 | Msa0799070:CDS |
GCAACAGTGTGTGAACGAGT+TGG | 0.618205 | 5_3:-12134706 | None:intergenic |
ACGATATGCTCCTACAGCAA+AGG | 0.620667 | 5_3:+12137692 | Msa0799070:CDS |
ATCCGGGAAGGACGTGGTGT+AGG | 0.620698 | 5_3:+12137759 | Msa0799070:CDS |
GCAGCAGTTTCAGAGATACC+AGG | 0.622188 | 5_3:-12138399 | None:intergenic |
TCTCTCCTTGAGCACATCTG+GGG | 0.622970 | 5_3:-12138373 | None:intergenic |
CACTGGAGATGGCAATGCCA+TGG | 0.623010 | 5_3:+12137307 | Msa0799070:CDS |
AGATCCGAGAGAGTTATTGG+AGG | 0.624161 | 5_3:-12134423 | None:intergenic |
AGCAGCTTGGAAACGATGCA+GGG | 0.624947 | 5_3:-12137133 | None:intergenic |
AATACACACGAGCCTTAGGA+GGG | 0.626806 | 5_3:-12142425 | None:intergenic |
CCTCAAGTCCGATCCCAGCA+CGG | 0.631679 | 5_3:-12137334 | None:intergenic |
TCCAGTGCATGTATGTGCTG+AGG | 0.632447 | 5_3:-12137291 | None:intergenic |
CTGGCCAGAAAACGATTGCA+TGG | 0.633199 | 5_3:+12139532 | Msa0799070:CDS |
TGATTCGTCTCATTTCAAGT+GGG | 0.634036 | 5_3:+12142712 | Msa0799070:three_prime_UTR |
AAATATGATGCAGTTGTGGT+AGG | 0.635444 | 5_3:+12134604 | Msa0799070:CDS |
AACAAAATAACACAAATATG+GGG | 0.636493 | 5_3:+12142798 | Msa0799070:three_prime_UTR |
ATGACTATGGAGATCCGGGA+AGG | 0.637410 | 5_3:+12137747 | Msa0799070:CDS |
GGAATTCTTAGGAATAGCGA+GGG | 0.637607 | 5_3:+12137654 | Msa0799070:CDS |
CTCTCCTTGAGCACATCTGG+GGG | 0.639375 | 5_3:-12138372 | None:intergenic |
GTTTCCACTTGTGCACAAGT+GGG | 0.639661 | 5_3:+12142486 | Msa0799070:three_prime_UTR |
GTGGCTTCGGGAAAATGGAA+GGG | 0.643859 | 5_3:-12134211 | None:intergenic |
GTCAAAGGAAGTGATTGGCT+AGG | 0.646721 | 5_3:+12136149 | Msa0799070:CDS |
TAGAGGAGCTCATGCCCGTG+AGG | 0.651502 | 5_3:+12140025 | Msa0799070:CDS |
GGATGTGTAGGTAGTTGCCA+AGG | 0.653439 | 5_3:+12137081 | Msa0799070:intron |
TCATAAATATGATGCAGTTG+TGG | 0.657398 | 5_3:+12134600 | Msa0799070:CDS |
GAAGCTAGGAAAGAGAGTAG+AGG | 0.661823 | 5_3:+12140008 | Msa0799070:CDS |
TGGAATTCTTAGGAATAGCG+AGG | 0.663327 | 5_3:+12137653 | Msa0799070:CDS |
TCCCACAAATCATCATGGAG+AGG | 0.663523 | 5_3:+12138497 | Msa0799070:CDS |
ACTAACCGTGAAGTCCTCAC+GGG | 0.668557 | 5_3:-12140039 | None:intergenic |
TGACTGAAGATGACTGGAGG+TGG | 0.670220 | 5_3:+12136111 | Msa0799070:CDS |
TGAACGAGTTGGGAAAAGCT+TGG | 0.674771 | 5_3:-12134695 | None:intergenic |
CTCAATAGTCTCGATCAAGT+CGG | 0.674901 | 5_3:-12139940 | None:intergenic |
CCAACTGTGCATTATAACAT+GGG | 0.676041 | 5_3:+12138468 | Msa0799070:CDS |
ACTGTGCATTATAACATGGG+TGG | 0.685484 | 5_3:+12138471 | Msa0799070:CDS |
GAGCGAGTCTTACACCGTCG+TGG | 0.686915 | 5_3:+12134576 | Msa0799070:intron |
GTGTAGGGAAGCACCAAAAG+CGG | 0.703329 | 5_3:+12136551 | Msa0799070:CDS |
GAGGATCTGTTAGAAGAACG+TGG | 0.703865 | 5_3:-12134404 | None:intergenic |
ATCATATTTATGATCCACGA+CGG | 0.704232 | 5_3:-12134590 | None:intergenic |
GAATTCTTAGGAATAGCGAG+GGG | 0.709202 | 5_3:+12137655 | Msa0799070:CDS |
AGTGATTGCCTTAAACATGG+AGG | 0.738491 | 5_3:+12137104 | Msa0799070:CDS |
AGTGGATGAAACACACTTTG+GGG | 0.750579 | 5_3:+12140156 | Msa0799070:CDS |
AATTCTTAGGAATAGCGAGG+GGG | 0.754649 | 5_3:+12137656 | Msa0799070:CDS |
ATATGACTGAAGATGACTGG+AGG | 0.760494 | 5_3:+12136108 | Msa0799070:CDS |
AGAAAATCAAGTTACCCCAG+TGG | 0.762989 | 5_3:-12137169 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTAGAATTTAACATTTTT+TGG | + | chr5_3:12134746-12134765 | Msa0799070:intron | 10.0% |
!!! | CTTTATATTTTTTTTTCAAT+TGG | - | chr5_3:12138558-12138577 | None:intergenic | 10.0% |
!! | AAAAAAAGGAAATTTATAAT+AGG | - | chr5_3:12140224-12140243 | None:intergenic | 10.0% |
!! | AATATTTGTCATTAAAAAAA+AGG | - | chr5_3:12140238-12140257 | None:intergenic | 10.0% |
!!! | TTTTTTTTAATGACAAATAT+TGG | + | chr5_3:12140237-12140256 | Msa0799070:intron | 10.0% |
!!! | ATTTTAAGATTAAATAGTTA+TGG | + | chr5_3:12140563-12140582 | Msa0799070:intron | 10.0% |
!!! | TTTCATGATTTTTTTTTTTT+TGG | - | chr5_3:12141478-12141497 | None:intergenic | 10.0% |
!!! | ATTTCTAATCACTTTTAATT+TGG | + | chr5_3:12134935-12134954 | Msa0799070:intron | 15.0% |
!!! | TCAGTACATTTTTATTATTT+TGG | + | chr5_3:12135437-12135456 | Msa0799070:intron | 15.0% |
!! | TTACAATTAATTAGTATTGT+TGG | - | chr5_3:12136216-12136235 | None:intergenic | 15.0% |
!!! | TAAAAGCATGTAAATATAAA+AGG | - | chr5_3:12137419-12137438 | None:intergenic | 15.0% |
!!! | ACTTTTTTTTCATTTTTCAT+TGG | + | chr5_3:12139174-12139193 | Msa0799070:intron | 15.0% |
!!! | CTTTTTTTTCATTTTTCATT+GGG | + | chr5_3:12139175-12139194 | Msa0799070:intron | 15.0% |
!! | TAATCTTAAAATAAAAAACC+TGG | - | chr5_3:12140555-12140574 | None:intergenic | 15.0% |
!! | GTAAGCATATTTATAATAAT+TGG | - | chr5_3:12142127-12142146 | None:intergenic | 15.0% |
!! | ATTATTATAAATATGCTTAC+AGG | + | chr5_3:12142127-12142146 | Msa0799070:intron | 15.0% |
!!! | TCTTTTTATTTATGTTGTGA+GGG | - | chr5_3:12134245-12134264 | None:intergenic | 20.0% |
!!! | TTCTTTTTATTTATGTTGTG+AGG | - | chr5_3:12134246-12134265 | None:intergenic | 20.0% |
!!! | CAAATTAATTTGGAATTACA+AGG | - | chr5_3:12134907-12134926 | None:intergenic | 20.0% |
!! | GTTTATGTTTGGATATATTT+GGG | + | chr5_3:12135076-12135095 | Msa0799070:intron | 20.0% |
!!! | ATGTTTGTTATGTATTCTTT+TGG | + | chr5_3:12135294-12135313 | Msa0799070:intron | 20.0% |
!!! | ATGTTTGTTATGTTTTCTTT+TGG | + | chr5_3:12135317-12135336 | Msa0799070:intron | 20.0% |
!!! | TATTATTTTGGAAAAAACCT+AGG | + | chr5_3:12135449-12135468 | Msa0799070:intron | 20.0% |
!!! | TAAACTTTAAAACAAAACCT+AGG | - | chr5_3:12135469-12135488 | None:intergenic | 20.0% |
!!! | ACTTTTTATATCACAACTAA+CGG | - | chr5_3:12135965-12135984 | None:intergenic | 20.0% |
!!! | TTGGAGGTAAATAATTTTAA+AGG | - | chr5_3:12136288-12136307 | None:intergenic | 20.0% |
!! | ACTATTCATTATAAGATCTA+AGG | - | chr5_3:12136876-12136895 | None:intergenic | 20.0% |
!!! | TGTTTTTCTCATTTCTATTT+TGG | + | chr5_3:12137605-12137624 | Msa0799070:intron | 20.0% |
!!! | ATACACTTTTTATTCATACT+TGG | - | chr5_3:12137814-12137833 | None:intergenic | 20.0% |
!! | AATGTACAAAATATGGTTTA+TGG | - | chr5_3:12138237-12138256 | None:intergenic | 20.0% |
!!! | ATAAACCATATTTTGTACAT+TGG | + | chr5_3:12138236-12138255 | Msa0799070:intron | 20.0% |
!! | TATTTCCAATGTACAAAATA+TGG | - | chr5_3:12138244-12138263 | None:intergenic | 20.0% |
!! | CTTACATAAAAATAAAGAGT+GGG | - | chr5_3:12138284-12138303 | None:intergenic | 20.0% |
!!! | ATCAGCAATAGTAATTTTTT+GGG | + | chr5_3:12138758-12138777 | Msa0799070:intron | 20.0% |
!!! | CAAAAATATGACTAGTTTTT+TGG | + | chr5_3:12139080-12139099 | Msa0799070:intron | 20.0% |
!! | GTTTCAAAGTAAAGTAATAT+TGG | - | chr5_3:12139691-12139710 | None:intergenic | 20.0% |
!! | TCAATTAATTGATAAAACGT+GGG | + | chr5_3:12139772-12139791 | Msa0799070:CDS | 20.0% |
!! | ACATTCAACAATTGTTAAAA+GGG | - | chr5_3:12139847-12139866 | None:intergenic | 20.0% |
!!! | TGTTCATTTTAAAAGTGTAT+TGG | + | chr5_3:12139891-12139910 | Msa0799070:intron | 20.0% |
!! | GCATTAATATGTATATTTAC+AGG | + | chr5_3:12139913-12139932 | Msa0799070:intron | 20.0% |
!!! | CATGATTTTTTTTTTTTTGG+TGG | - | chr5_3:12141475-12141494 | None:intergenic | 20.0% |
!!! | TAGCAAAACAATTTTTTCAT+CGG | + | chr5_3:12142635-12142654 | Msa0799070:three_prime_UTR | 20.0% |
!! | GAACAAAATAACACAAATAT+GGG | + | chr5_3:12142797-12142816 | Msa0799070:three_prime_UTR | 20.0% |
!! | AACAAAATAACACAAATATG+GGG | + | chr5_3:12142798-12142817 | Msa0799070:three_prime_UTR | 20.0% |
!!! | GTTTTTCTGTGTTTTGATTT+TGG | - | chr5_3:12134306-12134325 | None:intergenic | 25.0% |
! | TCAAATTCAATTCAACGAAT+CGG | - | chr5_3:12134490-12134509 | None:intergenic | 25.0% |
!!! | CAAAAATTGATTTTGAACCA+AGG | + | chr5_3:12134832-12134851 | Msa0799070:intron | 25.0% |
! | ATTGCAGTGTCAAATTAATT+TGG | - | chr5_3:12134917-12134936 | None:intergenic | 25.0% |
!!! | ACTTTTAATTTGGAGTTACA+GGG | + | chr5_3:12134945-12134964 | Msa0799070:intron | 25.0% |
! | TAAACCACTTTACATTTAAC+TGG | - | chr5_3:12135061-12135080 | None:intergenic | 25.0% |
! | AATGTAAAGTGGTTTATGTT+TGG | + | chr5_3:12135065-12135084 | Msa0799070:intron | 25.0% |
! | GGTTTATGTTTGGATATATT+TGG | + | chr5_3:12135075-12135094 | Msa0799070:intron | 25.0% |
!! | TTTCAAGCTAAAGTCAATTT+TGG | + | chr5_3:12135167-12135186 | Msa0799070:intron | 25.0% |
!! | CAAAATCTATTTTACACATC+CGG | + | chr5_3:12135230-12135249 | Msa0799070:intron | 25.0% |
! | TCAATTATGGATAACTGAAT+TGG | + | chr5_3:12135255-12135274 | Msa0799070:intron | 25.0% |
!!! | ATACTTCTAAAGTACTTGTT+AGG | - | chr5_3:12135606-12135625 | None:intergenic | 25.0% |
!! | GAAAGACACTTTTAAATGAA+GGG | - | chr5_3:12135691-12135710 | None:intergenic | 25.0% |
!!! | TTCATTTAAAAGTGTCTTTC+CGG | + | chr5_3:12135691-12135710 | Msa0799070:intron | 25.0% |
! | TCTGAATTGATAGGATATTT+GGG | - | chr5_3:12135762-12135781 | None:intergenic | 25.0% |
! | TGAGAATCAAAATTCTGTAT+AGG | + | chr5_3:12136061-12136080 | Msa0799070:intron | 25.0% |
! | GAGAATCAAAATTCTGTATA+GGG | + | chr5_3:12136062-12136081 | Msa0799070:intron | 25.0% |
!!! | CATGCGGTATTTTTATTTTT+AGG | - | chr5_3:12136346-12136365 | None:intergenic | 25.0% |
!! | CGAGAATCTAAAAAATCTTT+TGG | + | chr5_3:12136403-12136422 | Msa0799070:intron | 25.0% |
!! | TATGAACTAGGATTTTCTTT+TGG | + | chr5_3:12136456-12136475 | Msa0799070:intron | 25.0% |
! | GTTATTGAACTAGAGAATTA+TGG | + | chr5_3:12136573-12136592 | Msa0799070:CDS | 25.0% |
! | GATCTTATAATGAATAGTGA+TGG | + | chr5_3:12136878-12136897 | Msa0799070:CDS | 25.0% |
! | AATATGTTACTACTCTTAAC+AGG | + | chr5_3:12136945-12136964 | Msa0799070:intron | 25.0% |
! | ATATGTTACTACTCTTAACA+GGG | + | chr5_3:12136946-12136965 | Msa0799070:intron | 25.0% |
! | AACATGTTTGATAAAGCAAT+TGG | - | chr5_3:12136989-12137008 | None:intergenic | 25.0% |
! | ATGTTAACTAATTTCCATAC+TGG | + | chr5_3:12137060-12137079 | Msa0799070:intron | 25.0% |
!! | TTTTTCTTGTACTTCCTTTA+TGG | + | chr5_3:12137212-12137231 | Msa0799070:intron | 25.0% |
!!! | GTTTTCTATTCTTTGAAGTT+TGG | + | chr5_3:12137356-12137375 | Msa0799070:intron | 25.0% |
! | AATAACAAGATGATATCCTA+TGG | + | chr5_3:12137387-12137406 | Msa0799070:intron | 25.0% |
!! | GCTTTTATCGTAAATTATGT+AGG | + | chr5_3:12137432-12137451 | Msa0799070:intron | 25.0% |
!!! | ATTTCTATTTTGGACCTTTT+AGG | + | chr5_3:12137615-12137634 | Msa0799070:intron | 25.0% |
!! | CTTTTTATTCATACTTGGAT+TGG | - | chr5_3:12137809-12137828 | None:intergenic | 25.0% |
! | TTCTTCCAATCTTAAAGATA+TGG | + | chr5_3:12137980-12137999 | Msa0799070:intron | 25.0% |
!!! | AAGAAGGTTTTGGAATTAAA+TGG | + | chr5_3:12138011-12138030 | Msa0799070:intron | 25.0% |
!!! | TGATAGTCATTTTGTTCATA+TGG | + | chr5_3:12138045-12138064 | Msa0799070:intron | 25.0% |
! | GCTTACATAAAAATAAAGAG+TGG | - | chr5_3:12138285-12138304 | None:intergenic | 25.0% |
! | TTATGTAAGCTGTTATTAAG+TGG | + | chr5_3:12138295-12138314 | Msa0799070:intron | 25.0% |
! | TATGTAAGCTGTTATTAAGT+GGG | + | chr5_3:12138296-12138315 | Msa0799070:intron | 25.0% |
!!! | CATCAGCAATAGTAATTTTT+TGG | + | chr5_3:12138757-12138776 | Msa0799070:intron | 25.0% |
!! | GCAAAATGAAATGACTATTT+TGG | - | chr5_3:12138796-12138815 | None:intergenic | 25.0% |
! | AGCTCCATATTATTCATATA+GGG | - | chr5_3:12138835-12138854 | None:intergenic | 25.0% |
! | TAGCTCCATATTATTCATAT+AGG | - | chr5_3:12138836-12138855 | None:intergenic | 25.0% |
!!! | GACTAGTTTTTTGGATTAAT+TGG | + | chr5_3:12139089-12139108 | Msa0799070:intron | 25.0% |
!!! | AGTTTTTTGGATTAATTGGT+TGG | + | chr5_3:12139093-12139112 | Msa0799070:intron | 25.0% |
!!! | CTTTTGGATATTGTTGTTTT+CGG | + | chr5_3:12139356-12139375 | Msa0799070:CDS | 25.0% |
! | ATTCTTTCCAGTTAATGAAA+TGG | + | chr5_3:12139425-12139444 | Msa0799070:intron | 25.0% |
! | GACAAATTGAGAAATTCAAA+TGG | + | chr5_3:12139558-12139577 | Msa0799070:CDS | 25.0% |
! | GTCAATTAATTGATAAAACG+TGG | + | chr5_3:12139771-12139790 | Msa0799070:CDS | 25.0% |
! | GACATTCAACAATTGTTAAA+AGG | - | chr5_3:12139848-12139867 | None:intergenic | 25.0% |
! | TATGAAATTTGCACATTAAG+GGG | - | chr5_3:12140073-12140092 | None:intergenic | 25.0% |
! | GTATGAAATTTGCACATTAA+GGG | - | chr5_3:12140074-12140093 | None:intergenic | 25.0% |
! | AATAACCTTGTTCGAATAAA+AGG | - | chr5_3:12140096-12140115 | None:intergenic | 25.0% |
!!! | TAAGTGACTACTTTTGTAAA+AGG | - | chr5_3:12140368-12140387 | None:intergenic | 25.0% |
! | TTGTTTGATTGAATGGAATA+TGG | + | chr5_3:12140452-12140471 | Msa0799070:intron | 25.0% |
!!! | TCTCATAACTATTTTTCGTT+TGG | + | chr5_3:12140502-12140521 | Msa0799070:intron | 25.0% |
! | TAAGGTAACAAATCTTGTTA+TGG | + | chr5_3:12141122-12141141 | Msa0799070:intron | 25.0% |
!! | CTTAGATTATTTCTTAGGAT+AGG | - | chr5_3:12141163-12141182 | None:intergenic | 25.0% |
!! | TGCAACTTAGATTATTTCTT+AGG | - | chr5_3:12141168-12141187 | None:intergenic | 25.0% |
! | TTACTGAATAAATTCAAGCA+AGG | - | chr5_3:12141285-12141304 | None:intergenic | 25.0% |
! | TCAAATTGCAGAAACAATAT+TGG | - | chr5_3:12141526-12141545 | None:intergenic | 25.0% |
! | TTTACTCAATGACAATGTAA+GGG | + | chr5_3:12141555-12141574 | Msa0799070:intron | 25.0% |
! | AAGATAATTGCTTAAGCAAA+TGG | + | chr5_3:12141734-12141753 | Msa0799070:intron | 25.0% |
! | AGATAATTGCTTAAGCAAAT+GGG | + | chr5_3:12141735-12141754 | Msa0799070:intron | 25.0% |
!! | ATAATGGAGAATAGGAAAAT+GGG | - | chr5_3:12141886-12141905 | None:intergenic | 25.0% |
!! | GTTATATCATAATGGAGAAT+AGG | - | chr5_3:12141894-12141913 | None:intergenic | 25.0% |
! | TAGTATATCATAACAGATGA+TGG | + | chr5_3:12141993-12142012 | Msa0799070:intron | 25.0% |
! | ATGTATATCAAGCTTATTGT+GGG | - | chr5_3:12142096-12142115 | None:intergenic | 25.0% |
! | AGATTAACCATCTTAATGAT+TGG | - | chr5_3:12142209-12142228 | None:intergenic | 25.0% |
! | AAAAAACATGAATTTGACTG+AGG | + | chr5_3:12142245-12142264 | Msa0799070:intron | 25.0% |
! | ATGATATAGTTACTTATCGA+CGG | + | chr5_3:12142451-12142470 | Msa0799070:three_prime_UTR | 25.0% |
!!! | TCAATTGGTAACTTCTATTT+TGG | - | chr5_3:12142758-12142777 | None:intergenic | 25.0% |
! | ATAGAAGTTACCAATTGAAA+AGG | + | chr5_3:12142760-12142779 | Msa0799070:three_prime_UTR | 25.0% |
!! | TCTCATTTAACCTTTTCAAT+TGG | - | chr5_3:12142773-12142792 | None:intergenic | 25.0% |
! | TGAAAAGGTTAAATGAGAAT+CGG | + | chr5_3:12142775-12142794 | Msa0799070:three_prime_UTR | 25.0% |
! | GGAACAAAATAACACAAATA+TGG | + | chr5_3:12142796-12142815 | Msa0799070:three_prime_UTR | 25.0% |
TTTATTTATGTTGTGAGGGT+TGG | - | chr5_3:12134241-12134260 | None:intergenic | 30.0% | |
! | TGTTGATGCTAAATCGTTTT+TGG | + | chr5_3:12134532-12134551 | Msa0799070:intron | 30.0% |
ATCATATTTATGATCCACGA+CGG | - | chr5_3:12134593-12134612 | None:intergenic | 30.0% | |
TCATAAATATGATGCAGTTG+TGG | + | chr5_3:12134600-12134619 | Msa0799070:CDS | 30.0% | |
!!! | CACTTTTAATTTGGAGTTAC+AGG | + | chr5_3:12134944-12134963 | Msa0799070:intron | 30.0% |
TTCAAAAGATCCTGCAAATA+GGG | - | chr5_3:12134988-12135007 | None:intergenic | 30.0% | |
ATTCAAAAGATCCTGCAAAT+AGG | - | chr5_3:12134989-12135008 | None:intergenic | 30.0% | |
AATGCCAGTTAAATGTAAAG+TGG | + | chr5_3:12135054-12135073 | Msa0799070:intron | 30.0% | |
! | CAGTTATCCATAATTGATTC+CGG | - | chr5_3:12135252-12135271 | None:intergenic | 30.0% |
! | GAATTGGTACTTTTGCAATA+TGG | + | chr5_3:12135271-12135290 | Msa0799070:intron | 30.0% |
TAAACAAAGATCCCATCTTA+CGG | + | chr5_3:12135531-12135550 | Msa0799070:intron | 30.0% | |
! | AATAACACTTTTCTCCCATT+TGG | + | chr5_3:12135635-12135654 | Msa0799070:intron | 30.0% |
!! | TGTAGTTCTGGACAAAAATA+TGG | + | chr5_3:12135661-12135680 | Msa0799070:intron | 30.0% |
! | GGAAAGACACTTTTAAATGA+AGG | - | chr5_3:12135692-12135711 | None:intergenic | 30.0% |
! | TTAAAAAGCACACTTGATTC+CGG | - | chr5_3:12135713-12135732 | None:intergenic | 30.0% |
!! | AGTGTGCTTTTTAAGAAACA+TGG | + | chr5_3:12135719-12135738 | Msa0799070:intron | 30.0% |
!! | GTGTGCTTTTTAAGAAACAT+GGG | + | chr5_3:12135720-12135739 | Msa0799070:intron | 30.0% |
!! | TGTGCTTTTTAAGAAACATG+GGG | + | chr5_3:12135721-12135740 | Msa0799070:intron | 30.0% |
CTGAATTGATAGGATATTTG+GGG | - | chr5_3:12135761-12135780 | None:intergenic | 30.0% | |
GTCTGAATTGATAGGATATT+TGG | - | chr5_3:12135763-12135782 | None:intergenic | 30.0% | |
ATATCCTATCAATTCAGACT+TGG | + | chr5_3:12135764-12135783 | Msa0799070:intron | 30.0% | |
TATCCTATCAATTCAGACTT+GGG | + | chr5_3:12135765-12135784 | Msa0799070:intron | 30.0% | |
CTTTGTGAGATATGAAGATA+AGG | + | chr5_3:12135852-12135871 | Msa0799070:intron | 30.0% | |
AGACAAAAACTAGAGTCTAT+AGG | - | chr5_3:12135935-12135954 | None:intergenic | 30.0% | |
AATCAAAATTCTGTATAGGG+TGG | + | chr5_3:12136065-12136084 | Msa0799070:intron | 30.0% | |
AAAACAAATCTCTACATGCA+AGG | - | chr5_3:12136265-12136284 | None:intergenic | 30.0% | |
TCCAACAAACAAAATATGAC+CGG | + | chr5_3:12136303-12136322 | Msa0799070:intron | 30.0% | |
!!! | ACACAATACACAGTTTTTTG+TGG | + | chr5_3:12136841-12136860 | Msa0799070:CDS | 30.0% |
ATTGCAAATTAAGTGAAAGC+AGG | - | chr5_3:12136928-12136947 | None:intergenic | 30.0% | |
CTTTATCAAACATGTTACAG+TGG | + | chr5_3:12136993-12137012 | Msa0799070:intron | 30.0% | |
AAGATCTCACTAATCCATAA+AGG | - | chr5_3:12137229-12137248 | None:intergenic | 30.0% | |
TTAGAATGCTACTAGATTGT+TGG | + | chr5_3:12137844-12137863 | Msa0799070:intron | 30.0% | |
ATTGTTGCAGAATTGCTTAA+TGG | + | chr5_3:12137869-12137888 | Msa0799070:intron | 30.0% | |
AAGTTACATAACTTAAACGC+CGG | - | chr5_3:12137899-12137918 | None:intergenic | 30.0% | |
!! | TGGAAGAAACACTCATTTTT+AGG | - | chr5_3:12137968-12137987 | None:intergenic | 30.0% |
ATGGTGTGATTAATCATACT+AGG | - | chr5_3:12138605-12138624 | None:intergenic | 30.0% | |
GAAAATTTATCTTGCACAGA+TGG | - | chr5_3:12138624-12138643 | None:intergenic | 30.0% | |
GCTCCATATTATTCATATAG+GGG | - | chr5_3:12138834-12138853 | None:intergenic | 30.0% | |
AGTAAGCTGCAAATATAAGT+TGG | + | chr5_3:12138978-12138997 | Msa0799070:intron | 30.0% | |
TCCAATGATGCTGTAAATTT+GGG | - | chr5_3:12139023-12139042 | None:intergenic | 30.0% | |
TTCCAATGATGCTGTAAATT+TGG | - | chr5_3:12139024-12139043 | None:intergenic | 30.0% | |
ATTTACAGCATCATTGGAAA+TGG | + | chr5_3:12139025-12139044 | Msa0799070:intron | 30.0% | |
TAACAGTCCATTTCATTAAC+TGG | - | chr5_3:12139435-12139454 | None:intergenic | 30.0% | |
! | TTTTATCGCACTAATTTCAG+TGG | - | chr5_3:12139458-12139477 | None:intergenic | 30.0% |
CATTGCCTACTTCAAAAATT+CGG | + | chr5_3:12139583-12139602 | Msa0799070:CDS | 30.0% | |
!!! | TTCAACCGAATTTTTGAAGT+AGG | - | chr5_3:12139591-12139610 | None:intergenic | 30.0% |
CTTCTAATGTTTCTTGTGTA+CGG | - | chr5_3:12139650-12139669 | None:intergenic | 30.0% | |
ACACAAGAAACATTAGAAGA+AGG | + | chr5_3:12139651-12139670 | Msa0799070:CDS | 30.0% | |
TTGAAGACAGAAGTTTGATA+TGG | + | chr5_3:12139816-12139835 | Msa0799070:CDS | 30.0% | |
TGAATGTCCCTAATATTTGA+AGG | + | chr5_3:12139860-12139879 | Msa0799070:intron | 30.0% | |
GCAGATTCCTTCAAATATTA+GGG | - | chr5_3:12139870-12139889 | None:intergenic | 30.0% | |
AGCAGATTCCTTCAAATATT+AGG | - | chr5_3:12139871-12139890 | None:intergenic | 30.0% | |
GGTATGAAATTTGCACATTA+AGG | - | chr5_3:12140075-12140094 | None:intergenic | 30.0% | |
! | TCATACCTTTTATTCGAACA+AGG | + | chr5_3:12140088-12140107 | Msa0799070:intron | 30.0% |
TGGTATAGTTAGTATTATCC+TGG | + | chr5_3:12140257-12140276 | Msa0799070:intron | 30.0% | |
GGTATAGTTAGTATTATCCT+GGG | + | chr5_3:12140258-12140277 | Msa0799070:intron | 30.0% | |
AAGAGGATATAAAGTTAGCT+TGG | - | chr5_3:12140345-12140364 | None:intergenic | 30.0% | |
!! | ACTACTTTTGTAAAAGGAAG+AGG | - | chr5_3:12140362-12140381 | None:intergenic | 30.0% |
ATTGAATGGAATATGGAAGT+AGG | + | chr5_3:12140459-12140478 | Msa0799070:intron | 30.0% | |
! | TTTGGTGTAGATAGATGAAA+TGG | + | chr5_3:12140520-12140539 | Msa0799070:intron | 30.0% |
!! | CAACTTTGAAGCTGAAATAA+TGG | + | chr5_3:12140666-12140685 | Msa0799070:intron | 30.0% |
!! | TTGAAGCTGAAATAATGGAT+TGG | + | chr5_3:12140671-12140690 | Msa0799070:intron | 30.0% |
!! | TGAAGCTGAAATAATGGATT+GGG | + | chr5_3:12140672-12140691 | Msa0799070:intron | 30.0% |
ATAAAGTTAAAACTCAGCCA+TGG | + | chr5_3:12140964-12140983 | Msa0799070:intron | 30.0% | |
ATATTTCGATATTGCTGTGA+AGG | + | chr5_3:12141022-12141041 | Msa0799070:intron | 30.0% | |
TACTGTTTAATCCAGAAGTA+TGG | + | chr5_3:12141096-12141115 | Msa0799070:intron | 30.0% | |
! | AATCCAGAAGTATGGAAATA+AGG | + | chr5_3:12141104-12141123 | Msa0799070:intron | 30.0% |
! | TTACCTTATTTCCATACTTC+TGG | - | chr5_3:12141110-12141129 | None:intergenic | 30.0% |
! | GTAACAAATCTTGTTATGGA+AGG | + | chr5_3:12141126-12141145 | Msa0799070:intron | 30.0% |
GAATAAATTCAAGCAAGGAT+TGG | - | chr5_3:12141280-12141299 | None:intergenic | 30.0% | |
GACAATGCATAATATATGCA+AGG | + | chr5_3:12141427-12141446 | Msa0799070:intron | 30.0% | |
TGAAACACAAGTTCTTTGTT+TGG | + | chr5_3:12141493-12141512 | Msa0799070:intron | 30.0% | |
CTTTACTCAATGACAATGTA+AGG | + | chr5_3:12141554-12141573 | Msa0799070:intron | 30.0% | |
TGAATGCGCAAAAATATGAA+CGG | + | chr5_3:12141604-12141623 | Msa0799070:intron | 30.0% | |
GAGAAAATCTCTCTTTGTAT+TGG | + | chr5_3:12141626-12141645 | Msa0799070:intron | 30.0% | |
! | AAATCTCTCTTTGTATTGGT+TGG | + | chr5_3:12141630-12141649 | Msa0799070:intron | 30.0% |
GATAATTGCTTAAGCAAATG+GGG | + | chr5_3:12141736-12141755 | Msa0799070:intron | 30.0% | |
ATAATTGCTTAAGCAAATGG+GGG | + | chr5_3:12141737-12141756 | Msa0799070:intron | 30.0% | |
! | CATAATGGAGAATAGGAAAA+TGG | - | chr5_3:12141887-12141906 | None:intergenic | 30.0% |
AGGGCAAAGTTATATCATAA+TGG | - | chr5_3:12141902-12141921 | None:intergenic | 30.0% | |
GATATGAAAAGTGAATTGCA+AGG | - | chr5_3:12141971-12141990 | None:intergenic | 30.0% | |
! | GCTTTTCAACATTTGCTTAT+AGG | - | chr5_3:12142029-12142048 | None:intergenic | 30.0% |
CATGTATATCAAGCTTATTG+TGG | - | chr5_3:12142097-12142116 | None:intergenic | 30.0% | |
TGTTGAATCAAAGCCTATAT+GGG | - | chr5_3:12142169-12142188 | None:intergenic | 30.0% | |
ATGTTGAATCAAAGCCTATA+TGG | - | chr5_3:12142170-12142189 | None:intergenic | 30.0% | |
ATCTTAATGATTGGAACAGT+TGG | - | chr5_3:12142200-12142219 | None:intergenic | 30.0% | |
AACTGTTCCAATCATTAAGA+TGG | + | chr5_3:12142199-12142218 | Msa0799070:intron | 30.0% | |
TTAAGATGGTTAATCTGTTG+TGG | + | chr5_3:12142213-12142232 | Msa0799070:intron | 30.0% | |
!! | TGTGTTAATTTGCAGATTCT+GGG | + | chr5_3:12142332-12142351 | Msa0799070:intron | 30.0% |
TTTGAATACATTGGATGATG+AGG | + | chr5_3:12142392-12142411 | Msa0799070:CDS | 30.0% | |
!!! | TTTTTCATCGGTTTGTATGT+TGG | + | chr5_3:12142647-12142666 | Msa0799070:three_prime_UTR | 30.0% |
TTATTGTACACTGTATGTTC+AGG | + | chr5_3:12142687-12142706 | Msa0799070:three_prime_UTR | 30.0% | |
CCAGTGATCTTAAATCTATT+TGG | - | chr5_3:12142837-12142856 | None:intergenic | 30.0% | |
! | CCAAATAGATTTAAGATCAC+TGG | + | chr5_3:12142834-12142853 | Msa0799070:three_prime_UTR | 30.0% |
CACAACTTTATCTAGAAGTT+GGG | - | chr5_3:12142870-12142889 | None:intergenic | 30.0% | |
ACACAACTTTATCTAGAAGT+TGG | - | chr5_3:12142871-12142890 | None:intergenic | 30.0% | |
AAATATGATGCAGTTGTGGT+AGG | + | chr5_3:12134604-12134623 | Msa0799070:CDS | 35.0% | |
TGTTTCTTATGCATGCGTAT+AGG | + | chr5_3:12134771-12134790 | Msa0799070:intron | 35.0% | |
CTCAAAACTATGTGCATGTT+TGG | + | chr5_3:12134798-12134817 | Msa0799070:intron | 35.0% | |
!!! | TATGTGCATGTTTGGTTTTG+CGG | + | chr5_3:12134806-12134825 | Msa0799070:intron | 35.0% |
GCATTTGCATAATTAAGCCT+TGG | - | chr5_3:12134852-12134871 | None:intergenic | 35.0% | |
TCAAAAGATCCTGCAAATAG+GGG | - | chr5_3:12134987-12135006 | None:intergenic | 35.0% | |
TACACATCCGGAATCAATTA+TGG | + | chr5_3:12135242-12135261 | Msa0799070:intron | 35.0% | |
AAACAAAGATCCCATCTTAC+GGG | + | chr5_3:12135532-12135551 | Msa0799070:intron | 35.0% | |
! | AAATCCTTTTCCCGTAAGAT+GGG | - | chr5_3:12135545-12135564 | None:intergenic | 35.0% |
TTGGTTGTTGGTGCAAATAT+CGG | + | chr5_3:12135563-12135582 | Msa0799070:intron | 35.0% | |
! | TCTAAAGTACTTGTTAGGAG+TGG | - | chr5_3:12135601-12135620 | None:intergenic | 35.0% |
!! | TGGGAGAAAAGTGTTATTTC+TGG | - | chr5_3:12135633-12135652 | None:intergenic | 35.0% |
! | AAGTGATGGAATGTCAAACA+AGG | - | chr5_3:12135835-12135854 | None:intergenic | 35.0% |
CTTCATATCTCACAAAGTGA+TGG | - | chr5_3:12135849-12135868 | None:intergenic | 35.0% | |
AGAGTCTATAGGAGAATATC+TGG | - | chr5_3:12135924-12135943 | None:intergenic | 35.0% | |
TTTCGTGAGTGTGAATATTC+TGG | + | chr5_3:12136025-12136044 | Msa0799070:intron | 35.0% | |
GAAATATGACTGAAGATGAC+TGG | + | chr5_3:12136105-12136124 | Msa0799070:CDS | 35.0% | |
!! | GGTCATATTTTGTTTGTTGG+AGG | - | chr5_3:12136304-12136323 | None:intergenic | 35.0% |
!! | ACCGGTCATATTTTGTTTGT+TGG | - | chr5_3:12136307-12136326 | None:intergenic | 35.0% |
AACAAACAAAATATGACCGG+TGG | + | chr5_3:12136306-12136325 | Msa0799070:intron | 35.0% | |
TCAGATAGAAAAGTGACATG+CGG | - | chr5_3:12136362-12136381 | None:intergenic | 35.0% | |
ATGCATGCTCTATAATCTAC+AGG | + | chr5_3:12136504-12136523 | Msa0799070:intron | 35.0% | |
TCTATAATCTACAGGAGATC+AGG | + | chr5_3:12136512-12136531 | Msa0799070:intron | 35.0% | |
ATGCCATCCAATATATGTGT+AGG | + | chr5_3:12136535-12136554 | Msa0799070:CDS | 35.0% | |
TGCCATCCAATATATGTGTA+GGG | + | chr5_3:12136536-12136555 | Msa0799070:CDS | 35.0% | |
TTCCCTACACATATATTGGA+TGG | - | chr5_3:12136541-12136560 | None:intergenic | 35.0% | |
!! | TCTAGTTCAATAACCGCTTT+TGG | - | chr5_3:12136567-12136586 | None:intergenic | 35.0% |
AGAATATATCAGCGTGCATT+TGG | + | chr5_3:12136624-12136643 | Msa0799070:CDS | 35.0% | |
! | CAGAGCTTAAACTTTGGAAA+AGG | + | chr5_3:12136651-12136670 | Msa0799070:CDS | 35.0% |
! | ACTTTGGAAAAGGTATATCC+AGG | + | chr5_3:12136661-12136680 | Msa0799070:intron | 35.0% |
!! | GAAAAGGTATATCCAGGTTT+TGG | + | chr5_3:12136667-12136686 | Msa0799070:intron | 35.0% |
!!! | TATATCCAGGTTTTGGAGTA+GGG | + | chr5_3:12136674-12136693 | Msa0799070:intron | 35.0% |
!! | TTTTGAGAAGAGTTCTGATC+TGG | + | chr5_3:12136711-12136730 | Msa0799070:intron | 35.0% |
ATGTTACAGTGGTGAAAAAG+AGG | + | chr5_3:12137004-12137023 | Msa0799070:intron | 35.0% | |
AATTTCCATACTGGATGTGT+AGG | + | chr5_3:12137069-12137088 | Msa0799070:intron | 35.0% | |
! | AGATCTTTTATTCTGCACCA+GGG | + | chr5_3:12137242-12137261 | Msa0799070:intron | 35.0% |
ATATAAAAGGCTCACTCCAT+AGG | - | chr5_3:12137406-12137425 | None:intergenic | 35.0% | |
ACTACCAACCTTCTGTTATA+AGG | - | chr5_3:12137507-12137526 | None:intergenic | 35.0% | |
TCGATCTTGAAACTACATCT+CGG | - | chr5_3:12137728-12137747 | None:intergenic | 35.0% | |
AGTTTCAAGATCGATGACTA+TGG | + | chr5_3:12137734-12137753 | Msa0799070:CDS | 35.0% | |
AGAATTGCTTAATGGTAGAC+CGG | + | chr5_3:12137877-12137896 | Msa0799070:intron | 35.0% | |
TGGTTTATGGTAGAACACTA+AGG | - | chr5_3:12138224-12138243 | None:intergenic | 35.0% | |
ATTAAGTGGGTATCATTCAC+AGG | + | chr5_3:12138309-12138328 | Msa0799070:intron | 35.0% | |
AGATAGATGTGATCTTTCTC+AGG | - | chr5_3:12138336-12138355 | None:intergenic | 35.0% | |
CCAACTGTGCATTATAACAT+GGG | + | chr5_3:12138468-12138487 | Msa0799070:CDS | 35.0% | |
GCACCCCTATATGAATAATA+TGG | + | chr5_3:12138828-12138847 | Msa0799070:intron | 35.0% | |
TTTACCATGATGACAAGACA+TGG | + | chr5_3:12138917-12138936 | Msa0799070:intron | 35.0% | |
TTACCATGATGACAAGACAT+GGG | + | chr5_3:12138918-12138937 | Msa0799070:intron | 35.0% | |
! | AAGCTGCAAATATAAGTTGG+TGG | + | chr5_3:12138981-12139000 | Msa0799070:intron | 35.0% |
CCAATGATGCTGTAAATTTG+GGG | - | chr5_3:12139022-12139041 | None:intergenic | 35.0% | |
GCGTTTACTGAAAACATTAC+AGG | - | chr5_3:12139128-12139147 | None:intergenic | 35.0% | |
!!! | ACTTGGTGCAAATTCACTTT+TGG | + | chr5_3:12139340-12139359 | Msa0799070:CDS | 35.0% |
GCTTCTATTATCCATGTTAC+AGG | + | chr5_3:12139480-12139499 | Msa0799070:intron | 35.0% | |
! | TTTGTTTCTCTCCTGTAACA+TGG | - | chr5_3:12139494-12139513 | None:intergenic | 35.0% |
! | GAAACAAAAGCCTTTAGAGA+AGG | + | chr5_3:12139506-12139525 | Msa0799070:CDS | 35.0% |
!! | TACCTTTGCTGATTTGTAAC+AGG | + | chr5_3:12139746-12139765 | Msa0799070:intron | 35.0% |
AACCTGTTACAAATCAGCAA+AGG | - | chr5_3:12139751-12139770 | None:intergenic | 35.0% | |
AAGTGGATGAAACACACTTT+GGG | + | chr5_3:12140155-12140174 | Msa0799070:CDS | 35.0% | |
TGGAGTGATAACAAAGTCAA+AGG | - | chr5_3:12140297-12140316 | None:intergenic | 35.0% | |
! | TATAAAGTTAGCTTGGTGGT+TGG | - | chr5_3:12140338-12140357 | None:intergenic | 35.0% |
! | AGGATATAAAGTTAGCTTGG+TGG | - | chr5_3:12140342-12140361 | None:intergenic | 35.0% |
AAACAAAACCAGGACCTAAA+GGG | - | chr5_3:12140438-12140457 | None:intergenic | 35.0% | |
CCATTCAATCAAACAAAACC+AGG | - | chr5_3:12140448-12140467 | None:intergenic | 35.0% | |
!!! | CCTGGTTTTGTTTGATTGAA+TGG | + | chr5_3:12140445-12140464 | Msa0799070:intron | 35.0% |
ATGAAATGGTTACTCTTACC+AGG | + | chr5_3:12140534-12140553 | Msa0799070:intron | 35.0% | |
ACATTGCTTGGCACAAAATT+GGG | - | chr5_3:12140594-12140613 | None:intergenic | 35.0% | |
AACATTGCTTGGCACAAAAT+TGG | - | chr5_3:12140595-12140614 | None:intergenic | 35.0% | |
! | TTTTGTGCCAAGCAATGTTT+TGG | + | chr5_3:12140596-12140615 | Msa0799070:intron | 35.0% |
!! | GAAGCTGAAATAATGGATTG+GGG | + | chr5_3:12140673-12140692 | Msa0799070:intron | 35.0% |
!! | GAAATAATGGATTGGGGAAA+TGG | + | chr5_3:12140679-12140698 | Msa0799070:intron | 35.0% |
ACTTGGAATGAGCATTTCTA+CGG | - | chr5_3:12140772-12140791 | None:intergenic | 35.0% | |
AATCATCTACCAAACATGGA+AGG | + | chr5_3:12140802-12140821 | Msa0799070:intron | 35.0% | |
ACAGTAACTTGAGAAGCAAT+AGG | - | chr5_3:12140904-12140923 | None:intergenic | 35.0% | |
CAAGATCACATTCAGTGATT+TGG | + | chr5_3:12141245-12141264 | Msa0799070:intron | 35.0% | |
! | AAATTCAAGCAAGGATTGGT+TGG | - | chr5_3:12141276-12141295 | None:intergenic | 35.0% |
CATCACACCACTTGAAAATT+CGG | - | chr5_3:12141362-12141381 | None:intergenic | 35.0% | |
TGCATAATATATGCAAGGTC+CGG | + | chr5_3:12141432-12141451 | Msa0799070:intron | 35.0% | |
!!! | TTTTTTTTTGGTGGTGTCCA+GGG | - | chr5_3:12141466-12141485 | None:intergenic | 35.0% |
!!! | TTTTTTTTTTGGTGGTGTCC+AGG | - | chr5_3:12141467-12141486 | None:intergenic | 35.0% |
CAACTGTTACAAAGGGTTTA+GGG | - | chr5_3:12141586-12141605 | None:intergenic | 35.0% | |
TCAACTGTTACAAAGGGTTT+AGG | - | chr5_3:12141587-12141606 | None:intergenic | 35.0% | |
ACTTATGGAACTAGTCCATT+TGG | + | chr5_3:12141768-12141787 | Msa0799070:intron | 35.0% | |
TGGTTGAGAAGAAATTTCAG+AGG | + | chr5_3:12141828-12141847 | Msa0799070:intron | 35.0% | |
GGTTGAGAAGAAATTTCAGA+GGG | + | chr5_3:12141829-12141848 | Msa0799070:intron | 35.0% | |
ACAAGTAAACAAGTCACAAG+AGG | - | chr5_3:12141948-12141967 | None:intergenic | 35.0% | |
! | ATAACAGATGATGGCTGATT+TGG | + | chr5_3:12142002-12142021 | Msa0799070:intron | 35.0% |
AAAAGCTTAGCTCCATCATT+TGG | + | chr5_3:12142043-12142062 | Msa0799070:intron | 35.0% | |
TCAATAAGCTTGACCCATAT+AGG | + | chr5_3:12142153-12142172 | Msa0799070:intron | 35.0% | |
!! | GTGTGTTAATTTGCAGATTC+TGG | + | chr5_3:12142331-12142350 | Msa0799070:intron | 35.0% |
TCCAATGTATTCAAATGCAC+AGG | - | chr5_3:12142387-12142406 | None:intergenic | 35.0% | |
TATTAATACACACGAGCCTT+AGG | - | chr5_3:12142432-12142451 | None:intergenic | 35.0% | |
! | TTGATTCGTCTCATTTCAAG+TGG | + | chr5_3:12142711-12142730 | Msa0799070:three_prime_UTR | 35.0% |
! | TGATTCGTCTCATTTCAAGT+GGG | + | chr5_3:12142712-12142731 | Msa0799070:three_prime_UTR | 35.0% |
!!! | GGTAACTTCTATTTTGGTTG+TGG | - | chr5_3:12142752-12142771 | None:intergenic | 35.0% |
GGAAAATGGAAGGGAAATGA+TGG | - | chr5_3:12134205-12134224 | None:intergenic | 40.0% | |
! | CACATTTTTGCACACAAGGT+AGG | - | chr5_3:12134356-12134375 | None:intergenic | 40.0% |
CTACCTTGTGTGCAAAAATG+TGG | + | chr5_3:12134354-12134373 | Msa0799070:exon | 40.0% | |
AGATCCTCCAATAACTCTCT+CGG | + | chr5_3:12134419-12134438 | Msa0799070:CDS | 40.0% | |
ATGAGATCCGAGAGAGTTAT+TGG | - | chr5_3:12134429-12134448 | None:intergenic | 40.0% | |
GATTCAAGAGAAGAGGCTTA+CGG | - | chr5_3:12134468-12134487 | None:intergenic | 40.0% | |
AAGAGCTGCTATTGGACTTT+CGG | + | chr5_3:12134645-12134664 | Msa0799070:CDS | 40.0% | |
TGCAAATGCTCTCTGTAAAG+AGG | + | chr5_3:12134863-12134882 | Msa0799070:intron | 40.0% | |
GCAAATGCTCTCTGTAAAGA+GGG | + | chr5_3:12134864-12134883 | Msa0799070:intron | 40.0% | |
CAAATGCTCTCTGTAAAGAG+GGG | + | chr5_3:12134865-12134884 | Msa0799070:intron | 40.0% | |
! | CAAATCCTTTTCCCGTAAGA+TGG | - | chr5_3:12135546-12135565 | None:intergenic | 40.0% |
CATCTTACGGGAAAAGGATT+TGG | + | chr5_3:12135544-12135563 | Msa0799070:intron | 40.0% | |
TGGTTGTTGGTGCAAATATC+GGG | + | chr5_3:12135564-12135583 | Msa0799070:intron | 40.0% | |
CCAGAACTACACATCCAAAT+GGG | - | chr5_3:12135652-12135671 | None:intergenic | 40.0% | |
TCCAGAACTACACATCCAAA+TGG | - | chr5_3:12135653-12135672 | None:intergenic | 40.0% | |
AAACATGGGGTGAATAAAGC+TGG | + | chr5_3:12135734-12135753 | Msa0799070:intron | 40.0% | |
AACATGGGGTGAATAAAGCT+GGG | + | chr5_3:12135735-12135754 | Msa0799070:intron | 40.0% | |
GAACCCAAGTCTGAATTGAT+AGG | - | chr5_3:12135771-12135790 | None:intergenic | 40.0% | |
AGGTAAATTCGAGCCTAAGA+TGG | - | chr5_3:12135802-12135821 | None:intergenic | 40.0% | |
TCAAACAAGGATGAGTGATG+AGG | - | chr5_3:12135822-12135841 | None:intergenic | 40.0% | |
ATATGACTGAAGATGACTGG+AGG | + | chr5_3:12136108-12136127 | Msa0799070:CDS | 40.0% | |
ACACTGTCAAAGGAAGTGAT+TGG | + | chr5_3:12136144-12136163 | Msa0799070:CDS | 40.0% | |
AACAAAATATGACCGGTGGA+TGG | + | chr5_3:12136310-12136329 | Msa0799070:intron | 40.0% | |
CAGTTGAGCACATATGAACT+AGG | + | chr5_3:12136444-12136463 | Msa0799070:intron | 40.0% | |
GTGCTTCCCTACACATATAT+TGG | - | chr5_3:12136545-12136564 | None:intergenic | 40.0% | |
! | ATTGCCTTTTTCTCGAACAG+AGG | + | chr5_3:12136596-12136615 | Msa0799070:CDS | 40.0% |
ATATATCAGCGTGCATTTGG+TGG | + | chr5_3:12136627-12136646 | Msa0799070:CDS | 40.0% | |
!!! | GTATATCCAGGTTTTGGAGT+AGG | + | chr5_3:12136673-12136692 | Msa0799070:intron | 40.0% |
TCCATTTGTGGCTACAATAC+AGG | + | chr5_3:12136737-12136756 | Msa0799070:intron | 40.0% | |
ACCTGTATTGTAGCCACAAA+TGG | - | chr5_3:12136741-12136760 | None:intergenic | 40.0% | |
ATTTGTGGCTACAATACAGG+TGG | + | chr5_3:12136740-12136759 | Msa0799070:intron | 40.0% | |
! | GCTTTATTGCACACTCTCTA+TGG | + | chr5_3:12136806-12136825 | Msa0799070:CDS | 40.0% |
AACTACCTACACATCCAGTA+TGG | - | chr5_3:12137077-12137096 | None:intergenic | 40.0% | |
! | TGTTTAAGGCAATCACTCCT+TGG | - | chr5_3:12137101-12137120 | None:intergenic | 40.0% |
AGGAGTGATTGCCTTAAACA+TGG | + | chr5_3:12137101-12137120 | Msa0799070:CDS | 40.0% | |
AGTGATTGCCTTAAACATGG+AGG | + | chr5_3:12137104-12137123 | Msa0799070:CDS | 40.0% | |
ATTGCCTTAAACATGGAGGA+TGG | + | chr5_3:12137108-12137127 | Msa0799070:CDS | 40.0% | |
CCAAAATTGTTGAAGCAGCT+TGG | - | chr5_3:12137149-12137168 | None:intergenic | 40.0% | |
! | CCAAGCTGCTTCAACAATTT+TGG | + | chr5_3:12137146-12137165 | Msa0799070:CDS | 40.0% |
!! | CTTCAACAATTTTGGCCACT+GGG | + | chr5_3:12137154-12137173 | Msa0799070:CDS | 40.0% |
!! | TTCAACAATTTTGGCCACTG+GGG | + | chr5_3:12137155-12137174 | Msa0799070:CDS | 40.0% |
AGAAAATCAAGTTACCCCAG+TGG | - | chr5_3:12137172-12137191 | None:intergenic | 40.0% | |
! | TGGGGTAACTTGATTTTCTG+TGG | + | chr5_3:12137173-12137192 | Msa0799070:intron | 40.0% |
! | GAGATCTTTTATTCTGCACC+AGG | + | chr5_3:12137241-12137260 | Msa0799070:intron | 40.0% |
TTTATTCTGCACCAGGGTTA+TGG | + | chr5_3:12137248-12137267 | Msa0799070:intron | 40.0% | |
GTTTGTGCAATTTCACCCAA+CGG | + | chr5_3:12137462-12137481 | Msa0799070:CDS | 40.0% | |
TTTGTGCAATTTCACCCAAC+GGG | + | chr5_3:12137463-12137482 | Msa0799070:CDS | 40.0% | |
TTTCACCCAACGGGTATATA+TGG | + | chr5_3:12137472-12137491 | Msa0799070:CDS | 40.0% | |
GTTGCCTTATAACAGAAGGT+TGG | + | chr5_3:12137500-12137519 | Msa0799070:intron | 40.0% | |
GGCGCTTTGTCTAGTAAAAT+TGG | + | chr5_3:12137575-12137594 | Msa0799070:intron | 40.0% | |
TGGAATTCTTAGGAATAGCG+AGG | + | chr5_3:12137653-12137672 | Msa0799070:CDS | 40.0% | |
GGAATTCTTAGGAATAGCGA+GGG | + | chr5_3:12137654-12137673 | Msa0799070:CDS | 40.0% | |
GAATTCTTAGGAATAGCGAG+GGG | + | chr5_3:12137655-12137674 | Msa0799070:CDS | 40.0% | |
AATTCTTAGGAATAGCGAGG+GGG | + | chr5_3:12137656-12137675 | Msa0799070:CDS | 40.0% | |
CGATCTTGAAACTACATCTC+GGG | - | chr5_3:12137727-12137746 | None:intergenic | 40.0% | |
!! | CGACGCCATATCTTTAAGAT+TGG | - | chr5_3:12137988-12138007 | None:intergenic | 40.0% |
AGATATGGCGTCGTTTAAGA+AGG | + | chr5_3:12137995-12138014 | Msa0799070:intron | 40.0% | |
! | AAAGTTTTTCCTTCCCTCCA+GGG | - | chr5_3:12138081-12138100 | None:intergenic | 40.0% |
CTTATTCCACTAAGTGGGAT+CGG | + | chr5_3:12138179-12138198 | Msa0799070:intron | 40.0% | |
!!! | GAAACTGCTGCTATTTTTGC+TGG | + | chr5_3:12138411-12138430 | Msa0799070:CDS | 40.0% |
ACAGTTGGCAAAACAGGAAT+GGG | - | chr5_3:12138456-12138475 | None:intergenic | 40.0% | |
TAATGCACAGTTGGCAAAAC+AGG | - | chr5_3:12138462-12138481 | None:intergenic | 40.0% | |
GCCAACTGTGCATTATAACA+TGG | + | chr5_3:12138467-12138486 | Msa0799070:CDS | 40.0% | |
CCCATGTTATAATGCACAGT+TGG | - | chr5_3:12138471-12138490 | None:intergenic | 40.0% | |
ACTGTGCATTATAACATGGG+TGG | + | chr5_3:12138471-12138490 | Msa0799070:CDS | 40.0% | |
! | ACCTCTCCATGATGATTTGT+GGG | - | chr5_3:12138501-12138520 | None:intergenic | 40.0% |
TACCTCTCCATGATGATTTG+TGG | - | chr5_3:12138502-12138521 | None:intergenic | 40.0% | |
! | TTCATTTTGCAGTTGCACAC+TGG | + | chr5_3:12138806-12138825 | Msa0799070:intron | 40.0% |
CCCCAAATTTACAGCATCAT+TGG | + | chr5_3:12139019-12139038 | Msa0799070:intron | 40.0% | |
ACTAATGTGCATCGTTATGC+AGG | + | chr5_3:12139223-12139242 | Msa0799070:intron | 40.0% | |
ATGCAGGTGGTTACCATTAA+AGG | + | chr5_3:12139239-12139258 | Msa0799070:intron | 40.0% | |
ATCTGGATCGTCTCCTTTAA+TGG | - | chr5_3:12139255-12139274 | None:intergenic | 40.0% | |
AATCCAGGAACTAATGCATC+TGG | - | chr5_3:12139272-12139291 | None:intergenic | 40.0% | |
TGCATTAGTTCCTGGATTGA+TGG | + | chr5_3:12139274-12139293 | Msa0799070:CDS | 40.0% | |
TGAATTTGCACCAAGTCTGT+TGG | - | chr5_3:12139336-12139355 | None:intergenic | 40.0% | |
GTTGCAGAAATTCATAAGCC+AGG | + | chr5_3:12139398-12139417 | Msa0799070:CDS | 40.0% | |
TAACTGGAAAGAATCTTGCC+TGG | - | chr5_3:12139419-12139438 | None:intergenic | 40.0% | |
! | CCTAGTAACAGAAAAGCACA+TGG | - | chr5_3:12139713-12139732 | None:intergenic | 40.0% |
! | CCATGTGCTTTTCTGTTACT+AGG | + | chr5_3:12139710-12139729 | Msa0799070:intron | 40.0% |
TGTCTTCAACCTTGACATCA+TGG | - | chr5_3:12139805-12139824 | None:intergenic | 40.0% | |
CTCAATAGTCTCGATCAAGT+CGG | - | chr5_3:12139943-12139962 | None:intergenic | 40.0% | |
CTTGATCGAGACTATTGAGT+TGG | + | chr5_3:12139944-12139963 | Msa0799070:CDS | 40.0% | |
AGACAAGAGATGATGAGAAG+TGG | + | chr5_3:12140138-12140157 | Msa0799070:intron | 40.0% | |
GAAGTGGATGAAACACACTT+TGG | + | chr5_3:12140154-12140173 | Msa0799070:CDS | 40.0% | |
AGTGGATGAAACACACTTTG+GGG | + | chr5_3:12140156-12140175 | Msa0799070:CDS | 40.0% | |
AGTTAGTATTATCCTGGGTG+TGG | + | chr5_3:12140263-12140282 | Msa0799070:intron | 40.0% | |
AACAAAACCAGGACCTAAAG+GGG | - | chr5_3:12140437-12140456 | None:intergenic | 40.0% | |
CAAACAAAACCAGGACCTAA+AGG | - | chr5_3:12140439-12140458 | None:intergenic | 40.0% | |
! | TGGATTGGGGAAATGGAATA+TGG | + | chr5_3:12140686-12140705 | Msa0799070:intron | 40.0% |
CTTGGAATGAGCATTTCTAC+GGG | - | chr5_3:12140771-12140790 | None:intergenic | 40.0% | |
GATGATTGCAGATGGAAACT+TGG | - | chr5_3:12140789-12140808 | None:intergenic | 40.0% | |
GTTTGGTAGATGATTGCAGA+TGG | - | chr5_3:12140797-12140816 | None:intergenic | 40.0% | |
CTGCAATCATCTACCAAACA+TGG | + | chr5_3:12140798-12140817 | Msa0799070:intron | 40.0% | |
CTACCAAACATGGAAGGAAA+TGG | + | chr5_3:12140808-12140827 | Msa0799070:intron | 40.0% | |
TCATGCTTGGTAAGATGGAA+GGG | - | chr5_3:12140864-12140883 | None:intergenic | 40.0% | |
AAAGCTCATGCTTGGTAAGA+TGG | - | chr5_3:12140869-12140888 | None:intergenic | 40.0% | |
CATACACTAAAGCTCATGCT+TGG | - | chr5_3:12140877-12140896 | None:intergenic | 40.0% | |
ATTCTGACTATTCGTTTCCC+AGG | - | chr5_3:12140995-12141014 | None:intergenic | 40.0% | |
!! | ATCACCACCGAATTTTCAAG+TGG | + | chr5_3:12141352-12141371 | Msa0799070:intron | 40.0% |
GCATAATATATGCAAGGTCC+GGG | + | chr5_3:12141433-12141452 | Msa0799070:intron | 40.0% | |
CATAATATATGCAAGGTCCG+GGG | + | chr5_3:12141434-12141453 | Msa0799070:intron | 40.0% | |
GCGCATTCAACTGTTACAAA+GGG | - | chr5_3:12141593-12141612 | None:intergenic | 40.0% | |
TGCGCATTCAACTGTTACAA+AGG | - | chr5_3:12141594-12141613 | None:intergenic | 40.0% | |
! | GGTGTCTTTTGATCCATGTT+AGG | + | chr5_3:12141651-12141670 | Msa0799070:intron | 40.0% |
TACTACCATTCCTCTCCAAA+TGG | - | chr5_3:12141786-12141805 | None:intergenic | 40.0% | |
ACTACTGATATCAGAAGCAG+TGG | + | chr5_3:12141808-12141827 | Msa0799070:intron | 40.0% | |
GCCTGTGCATTTGAATACAT+TGG | + | chr5_3:12142383-12142402 | Msa0799070:CDS | 40.0% | |
ATAGTTACTTATCGACGGCT+CGG | + | chr5_3:12142456-12142475 | Msa0799070:three_prime_UTR | 40.0% | |
! | ACGCCACATTTTTGCACACA+AGG | - | chr5_3:12134360-12134379 | None:intergenic | 45.0% |
GAGGATCTGTTAGAAGAACG+TGG | - | chr5_3:12134407-12134426 | None:intergenic | 45.0% | |
AGATCCGAGAGAGTTATTGG+AGG | - | chr5_3:12134426-12134445 | None:intergenic | 45.0% | |
CGAATCGGATTCAAGAGAAG+AGG | - | chr5_3:12134475-12134494 | None:intergenic | 45.0% | |
GCTGGATTAAGAGCTGCTAT+TGG | + | chr5_3:12134637-12134656 | Msa0799070:CDS | 45.0% | |
GCTATTGGACTTTCGGAACA+TGG | + | chr5_3:12134652-12134671 | Msa0799070:CDS | 45.0% | |
! | TGAACGAGTTGGGAAAAGCT+TGG | - | chr5_3:12134698-12134717 | None:intergenic | 45.0% |
CAACAGTGTGTGAACGAGTT+GGG | - | chr5_3:12134708-12134727 | None:intergenic | 45.0% | |
TTCAAGTGACCCCTATTTGC+AGG | + | chr5_3:12134975-12134994 | Msa0799070:intron | 45.0% | |
AGATCCCATCTTACGGGAAA+AGG | + | chr5_3:12135538-12135557 | Msa0799070:intron | 45.0% | |
! | CGGGAAAAGGATTTGGTTGT+TGG | + | chr5_3:12135551-12135570 | Msa0799070:intron | 45.0% |
TGTTAGGAGTGGCAAAAGCT+GGG | - | chr5_3:12135590-12135609 | None:intergenic | 45.0% | |
TTGTTAGGAGTGGCAAAAGC+TGG | - | chr5_3:12135591-12135610 | None:intergenic | 45.0% | |
CCCATTTGGATGTGTAGTTC+TGG | + | chr5_3:12135649-12135668 | Msa0799070:intron | 45.0% | |
GGTGGCATAAATGCTGCATT+GGG | + | chr5_3:12136083-12136102 | Msa0799070:CDS | 45.0% | |
CACATGTACGACACTGTCAA+AGG | + | chr5_3:12136134-12136153 | Msa0799070:CDS | 45.0% | |
! | GTCAAAGGAAGTGATTGGCT+AGG | + | chr5_3:12136149-12136168 | Msa0799070:CDS | 45.0% |
AAAATATGACCGGTGGATGG+TGG | + | chr5_3:12136313-12136332 | Msa0799070:intron | 45.0% | |
CATATGTGCTCAACTGCTCA+AGG | - | chr5_3:12136440-12136459 | None:intergenic | 45.0% | |
CCATCCTCTGTTCGAGAAAA+AGG | - | chr5_3:12136603-12136622 | None:intergenic | 45.0% | |
! | CCTTTTTCTCGAACAGAGGA+TGG | + | chr5_3:12136600-12136619 | Msa0799070:CDS | 45.0% |
GGTGGTCAGAGCTTAAACTT+TGG | + | chr5_3:12136645-12136664 | Msa0799070:CDS | 45.0% | |
CTGATCTGGATCTCCATTTG+TGG | + | chr5_3:12136725-12136744 | Msa0799070:intron | 45.0% | |
GTGTATTGTGTCTCATAGCC+TGG | - | chr5_3:12136832-12136851 | None:intergenic | 45.0% | |
GGTTCCATCCTCCATGTTTA+AGG | - | chr5_3:12137115-12137134 | None:intergenic | 45.0% | |
!! | GCTTCAACAATTTTGGCCAC+TGG | + | chr5_3:12137153-12137172 | Msa0799070:CDS | 45.0% |
CTGCTCCATATATACCCGTT+GGG | - | chr5_3:12137480-12137499 | None:intergenic | 45.0% | |
GCAGGTTGCCTTATAACAGA+AGG | + | chr5_3:12137496-12137515 | Msa0799070:CDS | 45.0% | |
!! | TGCAAATCTAGCCTTGCCTT+TGG | + | chr5_3:12137539-12137558 | Msa0799070:intron | 45.0% |
!!! | TTGGACCTTTTAGGTTCTCG+TGG | + | chr5_3:12137624-12137643 | Msa0799070:intron | 45.0% |
CTTCACCACGAGAACCTAAA+AGG | - | chr5_3:12137632-12137651 | None:intergenic | 45.0% | |
!!! | CTTTTAGGTTCTCGTGGTGA+AGG | + | chr5_3:12137630-12137649 | Msa0799070:intron | 45.0% |
GTGGTGAAGGTGGAATTCTT+AGG | + | chr5_3:12137643-12137662 | Msa0799070:CDS | 45.0% | |
ACGATATGCTCCTACAGCAA+AGG | + | chr5_3:12137692-12137711 | Msa0799070:CDS | 45.0% | |
! | GATGCAAGATCCTTTGCTGT+AGG | - | chr5_3:12137705-12137724 | None:intergenic | 45.0% |
GATCGATGACTATGGAGATC+CGG | + | chr5_3:12137742-12137761 | Msa0799070:CDS | 45.0% | |
ATCGATGACTATGGAGATCC+GGG | + | chr5_3:12137743-12137762 | Msa0799070:CDS | 45.0% | |
! | GGCGTCGTTTAAGAAGGTTT+TGG | + | chr5_3:12138001-12138020 | Msa0799070:intron | 45.0% |
! | AAGTTTTTCCTTCCCTCCAG+GGG | - | chr5_3:12138080-12138099 | None:intergenic | 45.0% |
! | CAAAGTTTTTCCTTCCCTCC+AGG | - | chr5_3:12138082-12138101 | None:intergenic | 45.0% |
CCACTTAGTGGAATAAGGCT+CGG | - | chr5_3:12138176-12138195 | None:intergenic | 45.0% | |
!! | CGAGCCTTATTCCACTAAGT+GGG | + | chr5_3:12138174-12138193 | Msa0799070:intron | 45.0% |
CGATCCCACTTAGTGGAATA+AGG | - | chr5_3:12138181-12138200 | None:intergenic | 45.0% | |
!!! | TGCTGCTATTTTTGCTGGTG+TGG | + | chr5_3:12138416-12138435 | Msa0799070:CDS | 45.0% |
TGCTGGTGTGGATGTTACAA+AGG | + | chr5_3:12138428-12138447 | Msa0799070:CDS | 45.0% | |
CACAGTTGGCAAAACAGGAA+TGG | - | chr5_3:12138457-12138476 | None:intergenic | 45.0% | |
GGCATTCCCACAAATCATCA+TGG | + | chr5_3:12138492-12138511 | Msa0799070:CDS | 45.0% | |
TCCCACAAATCATCATGGAG+AGG | + | chr5_3:12138497-12138516 | Msa0799070:CDS | 45.0% | |
! | GACAAGACATGGGCACATTT+TGG | + | chr5_3:12138928-12138947 | Msa0799070:intron | 45.0% |
AATGTGCATCGTTATGCAGG+TGG | + | chr5_3:12139226-12139245 | Msa0799070:intron | 45.0% | |
GATCCAGATGCATTAGTTCC+TGG | + | chr5_3:12139266-12139285 | Msa0799070:CDS | 45.0% | |
! | AAGCCTTTAGAGAAGGATGC+TGG | + | chr5_3:12139513-12139532 | Msa0799070:CDS | 45.0% |
GGAGAGTTTCCATGATGTCA+AGG | + | chr5_3:12139793-12139812 | Msa0799070:CDS | 45.0% | |
GAAGCTAGGAAAGAGAGTAG+AGG | + | chr5_3:12140008-12140027 | Msa0799070:CDS | 45.0% | |
AACTAACCGTGAAGTCCTCA+CGG | - | chr5_3:12140043-12140062 | None:intergenic | 45.0% | |
TGGTTGGAATGGAGGAGTTA+AGG | - | chr5_3:12140322-12140341 | None:intergenic | 45.0% | |
! | AGTTAGCTTGGTGGTTGGAA+TGG | - | chr5_3:12140333-12140352 | None:intergenic | 45.0% |
GCGAGAAAATTGACCCCTTT+AGG | + | chr5_3:12140421-12140440 | Msa0799070:intron | 45.0% | |
AAATTGACCCCTTTAGGTCC+TGG | + | chr5_3:12140427-12140446 | Msa0799070:intron | 45.0% | |
AGACCAGCCAAAACATTGCT+TGG | - | chr5_3:12140606-12140625 | None:intergenic | 45.0% | |
!!! | AATGTTTTGGCTGGTCTCAG+AGG | + | chr5_3:12140609-12140628 | Msa0799070:intron | 45.0% |
AGGCCATTTCCTTCCATGTT+TGG | - | chr5_3:12140814-12140833 | None:intergenic | 45.0% | |
AAGGGAGAGGGAAAGGAAAT+AGG | - | chr5_3:12140834-12140853 | None:intergenic | 45.0% | |
AGATGGAAGGGAGAGAGAAA+GGG | - | chr5_3:12140852-12140871 | None:intergenic | 45.0% | |
AAGATGGAAGGGAGAGAGAA+AGG | - | chr5_3:12140853-12140872 | None:intergenic | 45.0% | |
CTCATGCTTGGTAAGATGGA+AGG | - | chr5_3:12140865-12140884 | None:intergenic | 45.0% | |
!! | TCAAGCAAGGATTGGTTGGA+CGG | - | chr5_3:12141272-12141291 | None:intergenic | 45.0% |
CACACCACTTGAAAATTCGG+TGG | - | chr5_3:12141359-12141378 | None:intergenic | 45.0% | |
TACCAACTGAGCTAAGCTCA+CGG | - | chr5_3:12141405-12141424 | None:intergenic | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr5_3:12141405-12141424 | Msa0799070:intron | 45.0% |
CCAAACCTTATCCCTCTAAG+TGG | - | chr5_3:12141682-12141701 | None:intergenic | 45.0% | |
CCACTTAGAGGGATAAGGTT+TGG | + | chr5_3:12141679-12141698 | Msa0799070:intron | 45.0% | |
GCTTAAGCAAATGGGGGAAA+AGG | + | chr5_3:12141743-12141762 | Msa0799070:intron | 45.0% | |
ATGGGGGAAAAGGCAACTTA+TGG | + | chr5_3:12141753-12141772 | Msa0799070:intron | 45.0% | |
TGGAACTAGTCCATTTGGAG+AGG | + | chr5_3:12141773-12141792 | Msa0799070:intron | 45.0% | |
CTAGTCCATTTGGAGAGGAA+TGG | + | chr5_3:12141778-12141797 | Msa0799070:intron | 45.0% | |
CCACATCAGCAAGGAAATGA+GGG | - | chr5_3:12141921-12141940 | None:intergenic | 45.0% | |
ACCACATCAGCAAGGAAATG+AGG | - | chr5_3:12141922-12141941 | None:intergenic | 45.0% | |
AGAAGGTCCGATTGGATTAC+AGG | + | chr5_3:12142361-12142380 | Msa0799070:CDS | 45.0% | |
GGTTGAATCATTCCCTCCTA+AGG | + | chr5_3:12142413-12142432 | Msa0799070:CDS | 45.0% | |
AATACACACGAGCCTTAGGA+GGG | - | chr5_3:12142428-12142447 | None:intergenic | 45.0% | |
TAATACACACGAGCCTTAGG+AGG | - | chr5_3:12142429-12142448 | None:intergenic | 45.0% | |
TAGTTACTTATCGACGGCTC+GGG | + | chr5_3:12142457-12142476 | Msa0799070:three_prime_UTR | 45.0% | |
TGTTTCCACTTGTGCACAAG+TGG | + | chr5_3:12142485-12142504 | Msa0799070:three_prime_UTR | 45.0% | |
GTTTCCACTTGTGCACAAGT+GGG | + | chr5_3:12142486-12142505 | Msa0799070:three_prime_UTR | 45.0% | |
! | TTTTCCCACTTGTGCACAAG+TGG | - | chr5_3:12142493-12142512 | None:intergenic | 45.0% |
!!! | TTTTAAAGTTTATAATATAT+AGG | + | chr5_3:12135477-12135496 | Msa0799070:intron | 5.0% |
GTGGCTTCGGGAAAATGGAA+GGG | - | chr5_3:12134214-12134233 | None:intergenic | 50.0% | |
GTATCGTGGCTTCGGGAAAA+TGG | - | chr5_3:12134219-12134238 | None:intergenic | 50.0% | |
!! | TGTTGTGAGGGTTGGTATCG+TGG | - | chr5_3:12134233-12134252 | None:intergenic | 50.0% |
GCAACAGTGTGTGAACGAGT+TGG | - | chr5_3:12134709-12134728 | None:intergenic | 50.0% | |
TTCACACACTGTTGCAGCTC+AGG | + | chr5_3:12134714-12134733 | Msa0799070:CDS | 50.0% | |
GGTTCCCTTGACACCATCTT+AGG | + | chr5_3:12135786-12135805 | Msa0799070:intron | 50.0% | |
! | CGAGCCTAAGATGGTGTCAA+GGG | - | chr5_3:12135793-12135812 | None:intergenic | 50.0% |
! | TCGAGCCTAAGATGGTGTCA+AGG | - | chr5_3:12135794-12135813 | None:intergenic | 50.0% |
GGGTGGCATAAATGCTGCAT+TGG | + | chr5_3:12136082-12136101 | Msa0799070:intron | 50.0% | |
TGACTGAAGATGACTGGAGG+TGG | + | chr5_3:12136111-12136130 | Msa0799070:CDS | 50.0% | |
GGTAAACAACCACCATCCAC+CGG | - | chr5_3:12136325-12136344 | None:intergenic | 50.0% | |
!! | GTGTAGGGAAGCACCAAAAG+CGG | + | chr5_3:12136551-12136570 | Msa0799070:CDS | 50.0% |
GACAACCCTACTCCAAAACC+TGG | - | chr5_3:12136682-12136701 | None:intergenic | 50.0% | |
ATTGCACACTCTCTATGGCC+AGG | + | chr5_3:12136811-12136830 | Msa0799070:CDS | 50.0% | |
GGATGTGTAGGTAGTTGCCA+AGG | + | chr5_3:12137081-12137100 | Msa0799070:intron | 50.0% | |
AGCAGCTTGGAAACGATGCA+GGG | - | chr5_3:12137136-12137155 | None:intergenic | 50.0% | |
AAGCAGCTTGGAAACGATGC+AGG | - | chr5_3:12137137-12137156 | None:intergenic | 50.0% | |
AGTACGCTCTACCATAACCC+TGG | - | chr5_3:12137262-12137281 | None:intergenic | 50.0% | |
ACCTCAGCACATACATGCAC+TGG | + | chr5_3:12137290-12137309 | Msa0799070:CDS | 50.0% | |
TCCAGTGCATGTATGTGCTG+AGG | - | chr5_3:12137294-12137313 | None:intergenic | 50.0% | |
GCACATACATGCACTGGAGA+TGG | + | chr5_3:12137296-12137315 | Msa0799070:CDS | 50.0% | |
CCTGCTCCATATATACCCGT+TGG | - | chr5_3:12137481-12137500 | None:intergenic | 50.0% | |
CCAACGGGTATATATGGAGC+AGG | + | chr5_3:12137478-12137497 | Msa0799070:CDS | 50.0% | |
! | ACTAGACAAAGCGCCTTGTG+AGG | - | chr5_3:12137570-12137589 | None:intergenic | 50.0% |
TTAGGTTCTCGTGGTGAAGG+TGG | + | chr5_3:12137633-12137652 | Msa0799070:intron | 50.0% | |
ATGACTATGGAGATCCGGGA+AGG | + | chr5_3:12137747-12137766 | Msa0799070:CDS | 50.0% | |
AAGGACGTGGTGTAGGTATG+TGG | + | chr5_3:12137766-12137785 | Msa0799070:intron | 50.0% | |
AGGACGTGGTGTAGGTATGT+GGG | + | chr5_3:12137767-12137786 | Msa0799070:intron | 50.0% | |
!! | CCGAGCCTTATTCCACTAAG+TGG | + | chr5_3:12138173-12138192 | Msa0799070:intron | 50.0% |
ATGTAGCCGATCCCACTTAG+TGG | - | chr5_3:12138188-12138207 | None:intergenic | 50.0% | |
ACTAAGTGGGATCGGCTACA+TGG | + | chr5_3:12138187-12138206 | Msa0799070:intron | 50.0% | |
TCTCTCCTTGAGCACATCTG+GGG | - | chr5_3:12138376-12138395 | None:intergenic | 50.0% | |
GTCTCTCCTTGAGCACATCT+GGG | - | chr5_3:12138377-12138396 | None:intergenic | 50.0% | |
AGTCTCTCCTTGAGCACATC+TGG | - | chr5_3:12138378-12138397 | None:intergenic | 50.0% | |
GCAGCAGTTTCAGAGATACC+AGG | - | chr5_3:12138402-12138421 | None:intergenic | 50.0% | |
GTGCCCATGTCTTGTCATCA+TGG | - | chr5_3:12138924-12138943 | None:intergenic | 50.0% | |
! | TTCCTGGATTGATGGCTGCT+GGG | + | chr5_3:12139282-12139301 | Msa0799070:CDS | 50.0% |
! | GTTCATGGTGCCAACAGACT+TGG | + | chr5_3:12139323-12139342 | Msa0799070:CDS | 50.0% |
TGGCCAGCATCCTTCTCTAA+AGG | - | chr5_3:12139519-12139538 | None:intergenic | 50.0% | |
CTGGCCAGAAAACGATTGCA+TGG | + | chr5_3:12139532-12139551 | Msa0799070:CDS | 50.0% | |
! | CCAGCCATGCAATCGTTTTC+TGG | - | chr5_3:12139539-12139558 | None:intergenic | 50.0% |
CCAGAAAACGATTGCATGGC+TGG | + | chr5_3:12139536-12139555 | Msa0799070:CDS | 50.0% | |
CAATGCACTCTGCAGAAGCT+AGG | + | chr5_3:12139994-12140013 | Msa0799070:CDS | 50.0% | |
ACTAACCGTGAAGTCCTCAC+GGG | - | chr5_3:12140042-12140061 | None:intergenic | 50.0% | |
GGAATGGAGGAGTTAAGGAG+TGG | - | chr5_3:12140317-12140336 | None:intergenic | 50.0% | |
! | TAGCTTGGTGGTTGGAATGG+AGG | - | chr5_3:12140330-12140349 | None:intergenic | 50.0% |
!!! | GTGCCAAGCAATGTTTTGGC+TGG | + | chr5_3:12140600-12140619 | Msa0799070:intron | 50.0% |
GTTACAACCTGCGCCAATTC+AGG | - | chr5_3:12140637-12140656 | None:intergenic | 50.0% | |
AGAGAGAAAGGGAGAGGGAA+AGG | - | chr5_3:12140841-12140860 | None:intergenic | 50.0% | |
AAGGGAGAGAGAAAGGGAGA+GGG | - | chr5_3:12140846-12140865 | None:intergenic | 50.0% | |
ACCAACTGAGCTAAGCTCAC+GGG | - | chr5_3:12141404-12141423 | None:intergenic | 50.0% | |
CTAAGTGGAGTCGCCTAACA+TGG | - | chr5_3:12141667-12141686 | None:intergenic | 50.0% | |
TGTTAGGCGACTCCACTTAG+AGG | + | chr5_3:12141667-12141686 | Msa0799070:intron | 50.0% | |
GTTAGGCGACTCCACTTAGA+GGG | + | chr5_3:12141668-12141687 | Msa0799070:intron | 50.0% | |
CGACTCCACTTAGAGGGATA+AGG | + | chr5_3:12141674-12141693 | Msa0799070:intron | 50.0% | |
CCCTCATTTCCTTGCTGATG+TGG | + | chr5_3:12141918-12141937 | Msa0799070:intron | 50.0% | |
TAGCTCCATCATTTGGCGAG+AGG | + | chr5_3:12142050-12142069 | Msa0799070:intron | 50.0% | |
AGCTCCATCATTTGGCGAGA+GGG | + | chr5_3:12142051-12142070 | Msa0799070:intron | 50.0% | |
ATCTCCCTCTCGCCAAATGA+TGG | - | chr5_3:12142058-12142077 | None:intergenic | 50.0% | |
! | CAGATTCTGGGAGAACGAGA+AGG | + | chr5_3:12142344-12142363 | Msa0799070:intron | 50.0% |
GCACAGGCCTGTAATCCAAT+CGG | - | chr5_3:12142371-12142390 | None:intergenic | 50.0% | |
CGTGGCTTCGGGAAAATGGA+AGG | - | chr5_3:12134215-12134234 | None:intergenic | 55.0% | |
!! | AGGGTTGGTATCGTGGCTTC+GGG | - | chr5_3:12134226-12134245 | None:intergenic | 55.0% |
!! | GAGGGTTGGTATCGTGGCTT+CGG | - | chr5_3:12134227-12134246 | None:intergenic | 55.0% |
GATGCAGTTGTGGTAGGTGC+TGG | + | chr5_3:12134610-12134629 | Msa0799070:CDS | 55.0% | |
CATGCGCTGCTGATCGAACT+GGG | + | chr5_3:12136780-12136799 | Msa0799070:CDS | 55.0% | |
CACTGGAGATGGCAATGCCA+TGG | + | chr5_3:12137307-12137326 | Msa0799070:CDS | 55.0% | |
GTGAGGTGCAACCAAAGGCA+AGG | - | chr5_3:12137553-12137572 | None:intergenic | 55.0% | |
GCCTTTGGTTGCACCTCACA+AGG | + | chr5_3:12137554-12137573 | Msa0799070:intron | 55.0% | |
GCCTTGTGAGGTGCAACCAA+AGG | - | chr5_3:12137558-12137577 | None:intergenic | 55.0% | |
TTAGGAATAGCGAGGGGGAG+CGG | + | chr5_3:12137661-12137680 | Msa0799070:CDS | 55.0% | |
TACCTACACCACGTCCTTCC+CGG | - | chr5_3:12137764-12137783 | None:intergenic | 55.0% | |
! | CATATGGTAGTGTGCACCCC+TGG | + | chr5_3:12138061-12138080 | Msa0799070:intron | 55.0% |
TCTACCCCCAGATGTGCTCA+AGG | + | chr5_3:12138368-12138387 | Msa0799070:CDS | 55.0% | |
CTCTCCTTGAGCACATCTGG+GGG | - | chr5_3:12138375-12138394 | None:intergenic | 55.0% | |
GTGCTCAAGGAGAGACTTCC+TGG | + | chr5_3:12138381-12138400 | Msa0799070:CDS | 55.0% | |
! | GTTCCTGGATTGATGGCTGC+TGG | + | chr5_3:12139281-12139300 | Msa0799070:CDS | 55.0% |
! | TCCTGGATTGATGGCTGCTG+GGG | + | chr5_3:12139283-12139302 | Msa0799070:CDS | 55.0% |
GCAGCCTGTGCATCAGTTCA+TGG | + | chr5_3:12139308-12139327 | Msa0799070:CDS | 55.0% | |
GGCACCATGAACTGATGCAC+AGG | - | chr5_3:12139315-12139334 | None:intergenic | 55.0% | |
TGCAGAGTGCATTGTGACGC+AGG | - | chr5_3:12139988-12140007 | None:intergenic | 55.0% | |
TCATGCCCGTGAGGACTTCA+CGG | + | chr5_3:12140034-12140053 | Msa0799070:CDS | 55.0% | |
AAGGTTCGATCTCCACACCC+AGG | - | chr5_3:12140278-12140297 | None:intergenic | 55.0% | |
GGTCTCAGAGGAGCCTGAAT+TGG | + | chr5_3:12140621-12140640 | Msa0799070:intron | 55.0% | |
GAAGGGAGAGAGAAAGGGAG+AGG | - | chr5_3:12140847-12140866 | None:intergenic | 55.0% | |
AACTCAGCCATGGCATGTCC+TGG | + | chr5_3:12140974-12140993 | Msa0799070:intron | 55.0% | |
ACTCAGCCATGGCATGTCCT+GGG | + | chr5_3:12140975-12140994 | Msa0799070:intron | 55.0% | |
TCGTTTCCCAGGACATGCCA+TGG | - | chr5_3:12140984-12141003 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+GGG | - | chr5_3:12141403-12141422 | None:intergenic | 55.0% | |
AGAGGCAGACCACATCAGCA+AGG | - | chr5_3:12141930-12141949 | None:intergenic | 55.0% | |
GGAGAACGAGAAGGTCCGAT+TGG | + | chr5_3:12142353-12142372 | Msa0799070:CDS | 55.0% | |
GAGCGAGTCTTACACCGTCG+TGG | + | chr5_3:12134576-12134595 | Msa0799070:intron | 60.0% | |
!! | GCAGTTGTGGTAGGTGCTGG+TGG | + | chr5_3:12134613-12134632 | Msa0799070:CDS | 60.0% |
GATCAGCAGCGCATGCGCAA+CGG | - | chr5_3:12136775-12136794 | None:intergenic | 60.0% | |
GCATGCGCTGCTGATCGAAC+TGG | + | chr5_3:12136779-12136798 | Msa0799070:CDS | 60.0% | |
CTCAAGTCCGATCCCAGCAC+GGG | - | chr5_3:12137336-12137355 | None:intergenic | 60.0% | |
CCTCAAGTCCGATCCCAGCA+CGG | - | chr5_3:12137337-12137356 | None:intergenic | 60.0% | |
TAGCGAGGGGGAGCGGTTTA+TGG | + | chr5_3:12137668-12137687 | Msa0799070:CDS | 60.0% | |
ATGGAGATCCGGGAAGGACG+TGG | + | chr5_3:12137753-12137772 | Msa0799070:CDS | 60.0% | |
ATCCGGGAAGGACGTGGTGT+AGG | + | chr5_3:12137759-12137778 | Msa0799070:CDS | 60.0% | |
! | ATGGTAGTGTGCACCCCTGG+AGG | + | chr5_3:12138064-12138083 | Msa0799070:intron | 60.0% |
! | TGGTAGTGTGCACCCCTGGA+GGG | + | chr5_3:12138065-12138084 | Msa0799070:intron | 60.0% |
TCCCCAGCAGCCATCAATCC+AGG | - | chr5_3:12139287-12139306 | None:intergenic | 60.0% | |
TAGAGGAGCTCATGCCCGTG+AGG | + | chr5_3:12140025-12140044 | Msa0799070:CDS | 60.0% | |
AGAGGAGCCTGAATTGGCGC+AGG | + | chr5_3:12140627-12140646 | Msa0799070:intron | 60.0% | |
CCCCGTGAGCTTAGCTCAGT+TGG | + | chr5_3:12141400-12141419 | Msa0799070:intron | 60.0% | |
ATGTGGCGTTGCGTCGCTCG+TGG | + | chr5_3:12134371-12134390 | Msa0799070:CDS | 65.0% | |
!! | GTGGTAGGTGCTGGTGGTGC+TGG | + | chr5_3:12134619-12134638 | Msa0799070:CDS | 65.0% |
AATGCCATGGCTGCCCGTGC+TGG | + | chr5_3:12137320-12137339 | Msa0799070:CDS | 65.0% | |
ATGCCATGGCTGCCCGTGCT+GGG | + | chr5_3:12137321-12137340 | Msa0799070:CDS | 65.0% | |
ATGGCTGCCCGTGCTGGGAT+CGG | + | chr5_3:12137326-12137345 | Msa0799070:CDS | 65.0% | |
CCGTGCTGGGATCGGACTTG+AGG | + | chr5_3:12137334-12137353 | Msa0799070:CDS | 65.0% | |
AGTGTGCACCCCTGGAGGGA+AGG | + | chr5_3:12138069-12138088 | Msa0799070:intron | 65.0% | |
AAGGTCCGGGGTTCGAACCC+TGG | + | chr5_3:12141446-12141465 | Msa0799070:intron | 65.0% | |
GGTGTCCAGGGTTCGAACCC+CGG | - | chr5_3:12141454-12141473 | None:intergenic | 65.0% | |
GATCCCAGCACGGGCAGCCA+TGG | - | chr5_3:12137327-12137346 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 12134180 | 12142923 | 12134180 | ID=Msa0799070;Name=Msa0799070 |
chr5_3 | mRNA | 12134180 | 12142923 | 12134180 | ID=Msa0799070-mRNA-1;Parent=Msa0799070;Name=Msa0799070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=191|1|1|1|1|1|16|474|627 |
chr5_3 | exon | 12134180 | 12134466 | 12134180 | ID=Msa0799070-mRNA-1:exon:4956;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12134577 | 12134735 | 12134577 | ID=Msa0799070-mRNA-1:exon:4957;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12136083 | 12136170 | 12136083 | ID=Msa0799070-mRNA-1:exon:4958;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12136526 | 12136672 | 12136526 | ID=Msa0799070-mRNA-1:exon:4959;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12136759 | 12136899 | 12136759 | ID=Msa0799070-mRNA-1:exon:4960;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12137091 | 12137176 | 12137091 | ID=Msa0799070-mRNA-1:exon:4961;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12137263 | 12137355 | 12137263 | ID=Msa0799070-mRNA-1:exon:4962;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12137454 | 12137517 | 12137454 | ID=Msa0799070-mRNA-1:exon:4963;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12137637 | 12137780 | 12137637 | ID=Msa0799070-mRNA-1:exon:4964;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12138331 | 12138518 | 12138331 | ID=Msa0799070-mRNA-1:exon:4965;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12139245 | 12139419 | 12139245 | ID=Msa0799070-mRNA-1:exon:4966;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12139502 | 12139672 | 12139502 | ID=Msa0799070-mRNA-1:exon:4967;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12139768 | 12139837 | 12139768 | ID=Msa0799070-mRNA-1:exon:4968;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12139935 | 12140055 | 12139935 | ID=Msa0799070-mRNA-1:exon:4969;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12140140 | 12140177 | 12140140 | ID=Msa0799070-mRNA-1:exon:4970;Parent=Msa0799070-mRNA-1 |
chr5_3 | exon | 12142347 | 12142923 | 12142347 | ID=Msa0799070-mRNA-1:exon:4971;Parent=Msa0799070-mRNA-1 |
chr5_3 | five_prime_UTR | 12134180 | 12134370 | 12134180 | ID=Msa0799070-mRNA-1:five_prime_utr;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12134371 | 12134466 | 12134371 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12134577 | 12134735 | 12134577 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12136083 | 12136170 | 12136083 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12136526 | 12136672 | 12136526 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12136759 | 12136899 | 12136759 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12137091 | 12137176 | 12137091 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12137263 | 12137355 | 12137263 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12137454 | 12137517 | 12137454 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12137637 | 12137780 | 12137637 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12138331 | 12138518 | 12138331 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12139245 | 12139419 | 12139245 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12139502 | 12139672 | 12139502 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12139768 | 12139837 | 12139768 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12139935 | 12140055 | 12139935 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12140140 | 12140177 | 12140140 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | CDS | 12142347 | 12142449 | 12142347 | ID=Msa0799070-mRNA-1:cds;Parent=Msa0799070-mRNA-1 |
chr5_3 | three_prime_UTR | 12142450 | 12142923 | 12142450 | ID=Msa0799070-mRNA-1:three_prime_utr;Parent=Msa0799070-mRNA-1 |
Gene Sequence |
Protein sequence |