AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1127430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127430 MtrunA17_Chr7g0270131 97.943 778 12 2 1 777 1 775 0.0 1555
Msa1127430 MtrunA17_Chr2g0277821 45.098 561 274 8 70 613 341 884 1.60e-141 445
Msa1127430 MtrunA17_Chr2g0330401 49.652 431 213 4 181 609 42 470 2.75e-138 417
Msa1127430 MtrunA17_Chr4g0058591 49.315 365 183 2 192 555 160 523 1.47e-114 357
Msa1127430 MtrunA17_Chr6g0449911 43.187 433 228 7 215 644 146 563 5.93e-109 348
Msa1127430 MtrunA17_Chr2g0293631 43.961 414 218 7 211 615 467 875 8.45e-105 348
Msa1127430 MtrunA17_Chr3g0107851 41.687 403 220 5 198 587 77 477 2.36e-103 329
Msa1127430 MtrunA17_Chr4g0076491 40.783 434 234 6 196 609 249 679 1.34e-101 328
Msa1127430 MtrunA17_Chr6g0449741 40.783 434 232 7 196 609 211 639 4.09e-100 323
Msa1127430 MtrunA17_Chr1g0176041 40.295 474 247 9 192 646 114 570 2.65e-98 317
Msa1127430 MtrunA17_Chr3g0121351 39.400 467 240 9 172 615 94 540 4.46e-95 308
Msa1127430 MtrunA17_Chr1g0200181 42.163 453 239 10 204 643 115 557 5.31e-94 305
Msa1127430 MtrunA17_Chr1g0157691 40.166 483 246 11 204 667 117 575 4.99e-93 303
Msa1127430 MtrunA17_Chr5g0409981 43.655 394 211 7 224 610 94 483 1.00e-92 300
Msa1127430 MtrunA17_Chr4g0063551 40.964 415 225 6 217 613 123 535 9.88e-92 301
Msa1127430 MtrunA17_Chr7g0236841 37.190 363 219 6 230 590 6 361 4.31e-70 237
Msa1127430 MtrunA17_Chr6g0483491 36.464 362 223 5 230 590 6 361 4.63e-70 236
Msa1127430 MtrunA17_Chr7g0263771 34.975 406 251 6 215 615 110 507 3.30e-69 239
Msa1127430 MtrunA17_Chr4g0040761 37.017 362 221 6 235 594 20 376 5.73e-66 234
Msa1127430 MtrunA17_Chr3g0095031 36.512 367 220 6 225 589 88 443 9.51e-65 226
Msa1127430 MtrunA17_Chr3g0098121 36.387 382 229 6 234 605 152 529 5.80e-64 228
Msa1127430 MtrunA17_Chr2g0310581 36.512 367 219 7 234 594 53 411 1.38e-62 218
Msa1127430 MtrunA17_Chr2g0297261 33.705 359 221 6 230 583 30 376 7.42e-62 213
Msa1127430 MtrunA17_Chr2g0300291 36.292 383 229 7 234 605 141 519 1.41e-61 221
Msa1127430 MtrunA17_Chr5g0442191 35.422 367 224 6 225 589 79 434 2.43e-61 217
Msa1127430 MtrunA17_Chr2g0329931 34.530 362 230 4 233 594 40 394 4.25e-61 211
Msa1127430 MtrunA17_Chr1g0193491 38.547 358 207 7 239 589 119 470 5.97e-61 217
Msa1127430 MtrunA17_Chr7g0271121 38.375 357 207 8 240 589 111 461 7.28e-61 219
Msa1127430 MtrunA17_Chr8g0342861 34.072 361 231 4 234 594 41 394 9.85e-60 208
Msa1127430 MtrunA17_Chr2g0299681 33.795 361 232 4 234 594 41 394 1.09e-58 205
Msa1127430 MtrunA17_Chr4g0070981 34.930 355 222 6 234 587 41 387 1.38e-58 204
Msa1127430 MtrunA17_Chr6g0461751 30.549 419 274 8 201 611 109 518 1.06e-57 206
Msa1127430 MtrunA17_Chr8g0347151 36.119 371 219 11 235 590 202 569 8.19e-53 194
Msa1127430 MtrunA17_Chr6g0475251 33.594 384 217 11 223 591 104 464 1.29e-52 194
Msa1127430 MtrunA17_Chr8g0347161 35.135 370 224 11 235 590 103 470 9.14e-52 190
Msa1127430 MtrunA17_Chr7g0247221 31.373 357 233 7 235 590 144 489 2.79e-51 187
Msa1127430 MtrunA17_Chr7g0247181 31.373 357 233 7 235 590 141 486 3.83e-51 187
Msa1127430 MtrunA17_Chr7g0247191 31.092 357 234 7 235 590 151 496 1.49e-50 185
Msa1127430 MtrunA17_Chr8g0347171 34.595 370 226 12 235 590 161 528 1.59e-50 187
Msa1127430 MtrunA17_Chr1g0192021 30.216 417 242 8 233 604 25 437 2.90e-50 186
Msa1127430 MtrunA17_Chr4g0062301 34.181 354 224 6 247 594 110 460 3.73e-50 185
Msa1127430 MtrunA17_Chr8g0386451 34.225 374 230 10 235 594 289 660 1.52e-49 186
Msa1127430 MtrunA17_Chr7g0236831 32.564 433 210 14 235 592 164 589 3.22e-48 183
Msa1127430 MtrunA17_Chr3g0114081 32.609 368 227 7 244 591 26 392 6.70e-48 179
Msa1127430 MtrunA17_Chr4g0003441 31.564 358 225 10 235 584 109 454 1.10e-47 176
Msa1127430 MtrunA17_Chr6g0466611 30.688 378 245 7 232 594 140 515 1.12e-47 180
Msa1127430 MtrunA17_Chr5g0443991 37.578 322 190 8 257 571 99 416 9.34e-47 178
Msa1127430 MtrunA17_Chr2g0307471 31.680 363 240 5 233 590 90 449 1.00e-46 175
Msa1127430 MtrunA17_Chr1g0204391 31.026 390 217 11 223 582 45 412 2.85e-46 174
Msa1127430 MtrunA17_Chr4g0029191 29.567 416 218 13 234 575 44 458 4.18e-45 171
Msa1127430 MtrunA17_Chr4g0034411 36.137 321 195 8 257 571 99 415 4.69e-45 173
Msa1127430 MtrunA17_Chr2g0301281 29.087 416 220 13 234 575 41 455 6.25e-44 168
Msa1127430 MtrunA17_Chr2g0309551 28.873 426 243 8 229 598 104 525 1.69e-40 157
Msa1127430 MtrunA17_Chr1g0149251 30.503 318 207 8 272 584 2 310 3.15e-40 151
Msa1127430 MtrunA17_Chr1g0179761 29.630 378 232 12 234 584 80 450 3.11e-39 152
Msa1127430 MtrunA17_Chr5g0429221 26.512 430 286 12 232 648 1 413 4.34e-38 147
Msa1127430 MtrunA17_Chr3g0145781 26.598 391 259 8 232 595 130 519 4.27e-36 144
Msa1127430 MtrunA17_Chr4g0039471 36.683 199 118 3 234 429 223 416 1.23e-29 122
Msa1127430 MtrunA17_Chr4g0039471 31.500 200 84 4 234 428 2 153 1.77e-19 92.0
Msa1127430 MtrunA17_Chr8g0349951 36.943 157 94 2 230 385 6 158 1.57e-28 112
Msa1127430 MtrunA17_Chr1g0169331 25.995 377 229 8 251 588 8 373 5.56e-28 117
Msa1127430 MtrunA17_Chr4g0062321 31.646 237 151 6 315 547 4 233 2.37e-24 102
Msa1127430 MtrunA17_Chr5g0434301 23.604 394 221 8 271 595 70 452 6.84e-24 106
Msa1127430 MtrunA17_Chr4g0004301 23.350 394 222 8 271 595 70 452 4.64e-23 103
Msa1127430 MtrunA17_Chr8g0342851 26.023 342 200 13 263 594 2 300 4.81e-22 97.8
Msa1127430 MtrunA17_Chr4g0074521 28.186 408 239 18 228 594 76 470 6.43e-21 97.1
Msa1127430 MtrunA17_Chr3g0137891 34.503 171 100 6 272 437 2 165 2.05e-19 88.2
Msa1127430 MtrunA17_Chr2g0300871 25.150 334 219 9 252 571 39 355 4.89e-18 89.0
Msa1127430 MtrunA17_Chr4g0025131 32.370 173 109 4 224 393 46 213 2.34e-16 80.5
Msa1127430 MtrunA17_Chr3g0137901 31.034 116 79 1 469 584 32 146 1.02e-14 73.2
Msa1127430 MtrunA17_Chr4g0025141 27.273 187 122 4 413 586 15 200 1.03e-13 71.6
Msa1127430 MtrunA17_Chr4g0058601 48.000 75 38 1 543 617 9 82 2.16e-13 67.8
Msa1127430 MtrunA17_Chr1g0171481 23.380 355 252 12 269 612 175 520 5.51e-13 72.4
Msa1127430 MtrunA17_Chr0c30g0494091 30.769 208 127 7 228 423 76 278 6.43e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1127430 AT2G47330.1 77.378 778 155 10 1 776 1 759 0.0 1135
Msa1127430 AT1G20920.2 44.007 584 299 11 69 642 30 595 7.38e-144 443
Msa1127430 AT5G63120.2 51.659 422 201 3 193 613 125 544 1.98e-142 432
Msa1127430 AT1G20920.4 44.505 555 286 8 69 613 368 910 2.65e-141 446
Msa1127430 AT1G20920.6 44.505 555 286 8 69 613 368 910 2.65e-141 446
Msa1127430 AT1G20920.3 44.505 555 286 8 69 613 368 910 2.65e-141 446
Msa1127430 AT1G20920.7 44.505 555 286 8 69 613 368 910 2.65e-141 446
Msa1127430 AT1G20920.5 44.505 555 286 8 69 613 368 910 2.65e-141 446
Msa1127430 AT1G20920.1 44.505 555 286 8 69 613 368 910 2.65e-141 446
Msa1127430 AT1G55150.1 49.526 422 210 3 192 612 58 477 6.42e-138 417
Msa1127430 AT1G55150.2 49.526 422 210 3 192 612 83 502 6.88e-137 415
Msa1127430 AT3G09620.1 43.739 551 263 9 69 613 239 748 1.12e-128 408
Msa1127430 AT3G09620.2 43.739 551 263 9 69 613 240 749 1.22e-128 408
Msa1127430 AT5G63120.1 51.852 351 167 2 193 542 125 474 8.33e-119 367
Msa1127430 AT5G63120.3 51.852 351 167 2 193 542 125 474 1.20e-118 366
Msa1127430 AT5G63120.4 51.852 351 167 2 193 542 125 474 1.20e-118 366
Msa1127430 AT5G63120.5 51.852 351 167 2 193 542 125 474 1.20e-118 366
Msa1127430 AT5G14610.6 42.344 418 235 5 202 617 130 543 6.65e-106 338
Msa1127430 AT5G14610.2 42.344 418 235 5 202 617 130 543 7.20e-106 338
Msa1127430 AT5G14610.5 42.344 418 235 5 202 617 138 551 1.28e-105 338
Msa1127430 AT3G01540.1 42.143 420 233 7 202 617 127 540 1.43e-104 334
Msa1127430 AT3G01540.4 42.143 420 233 7 202 617 127 540 1.48e-104 334
Msa1127430 AT3G01540.2 42.143 420 233 7 202 617 127 540 1.48e-104 334
Msa1127430 AT3G01540.3 42.143 420 233 7 202 617 127 540 1.48e-104 334
Msa1127430 AT3G06480.1 42.689 424 233 7 195 615 399 815 2.80e-104 345
Msa1127430 AT2G33730.1 41.784 426 225 6 204 609 284 706 5.69e-102 331
Msa1127430 AT2G42520.2 42.478 452 236 7 183 615 108 554 1.03e-101 327
Msa1127430 AT2G42520.1 42.478 452 236 7 183 615 108 554 1.03e-101 327
Msa1127430 AT2G42520.3 42.478 452 236 7 183 615 108 554 1.03e-101 327
Msa1127430 AT3G58510.1 40.940 447 247 7 183 615 101 544 1.20e-98 318
Msa1127430 AT3G58510.3 40.940 447 247 7 183 615 101 544 1.20e-98 318
Msa1127430 AT3G58510.2 40.940 447 247 7 183 615 101 544 1.20e-98 318
Msa1127430 AT5G14610.7 43.817 372 203 5 248 617 45 412 8.25e-97 310
Msa1127430 AT5G14610.3 43.817 372 203 5 248 617 45 412 8.25e-97 310
Msa1127430 AT5G14610.1 43.817 372 203 5 248 617 244 611 1.54e-96 316
Msa1127430 AT3G58570.1 40.222 450 248 9 183 615 96 541 4.15e-96 313
Msa1127430 AT5G51280.1 40.798 451 248 8 204 643 117 559 5.14e-93 303
Msa1127430 AT4G33370.1 37.910 488 285 8 173 650 38 517 6.46e-92 298
Msa1127430 AT1G31970.1 41.604 399 221 7 232 622 115 509 1.71e-87 286
Msa1127430 AT5G14610.4 42.693 349 195 4 202 548 138 483 3.60e-87 285
Msa1127430 AT3G06480.2 43.213 361 194 7 195 551 399 752 7.00e-86 289
Msa1127430 AT1G28180.1 44.785 326 171 5 263 584 3 323 3.15e-81 265
Msa1127430 AT3G09720.2 34.615 416 258 8 216 625 120 527 3.07e-71 243
Msa1127430 AT3G09720.1 34.615 416 258 8 216 625 120 527 3.07e-71 243
Msa1127430 AT5G60990.1 34.688 369 226 6 232 590 8 371 1.14e-66 228
Msa1127430 AT1G16280.1 36.885 366 217 7 235 594 60 417 3.87e-65 225
Msa1127430 AT1G77030.1 36.957 368 213 8 235 594 30 386 4.30e-64 230
Msa1127430 AT3G22330.1 35.775 355 222 5 237 589 108 458 7.15e-63 222
Msa1127430 AT3G02065.3 31.435 439 278 9 197 623 75 502 3.19e-62 218
Msa1127430 AT3G02065.2 31.435 439 278 9 197 623 75 502 3.19e-62 218
Msa1127430 AT3G13920.1 35.278 360 220 5 233 589 39 388 3.95e-62 215
Msa1127430 AT3G13920.5 35.278 360 220 5 233 589 43 392 5.86e-62 214
Msa1127430 AT3G13920.3 35.278 360 220 5 233 589 29 378 6.01e-62 214
Msa1127430 AT3G13920.2 35.278 360 220 5 233 589 39 388 6.41e-62 214
Msa1127430 AT4G16630.1 36.544 353 219 4 234 584 168 517 8.40e-62 223
Msa1127430 AT3G19760.1 32.213 357 229 5 230 583 32 378 3.77e-61 212
Msa1127430 AT1G54270.1 35.278 360 220 5 233 589 39 388 4.05e-61 212
Msa1127430 AT3G22310.2 36.415 357 217 7 237 589 120 470 7.44e-61 216
Msa1127430 AT3G22310.1 36.415 357 217 7 237 589 120 470 9.90e-61 216
Msa1127430 AT3G13920.4 36.257 342 205 5 251 589 52 383 1.33e-60 210
Msa1127430 AT1G54270.2 36.257 342 205 5 251 589 52 383 1.33e-59 207
Msa1127430 AT5G26742.1 38.462 351 202 7 247 589 116 460 1.73e-59 215
Msa1127430 AT5G26742.2 38.462 351 202 7 247 589 116 460 1.75e-59 215
Msa1127430 AT1G51380.1 33.148 359 223 6 230 583 19 365 2.03e-59 207
Msa1127430 AT1G72730.1 33.241 361 234 4 234 594 42 395 2.67e-58 204
Msa1127430 AT5G26742.3 39.394 330 186 7 268 589 44 367 5.86e-58 209
Msa1127430 AT4G00660.1 31.653 357 232 7 235 590 133 478 6.02e-54 195
Msa1127430 AT4G00660.2 31.653 357 232 7 235 590 133 478 6.02e-54 195
Msa1127430 AT5G65900.1 34.254 362 231 6 233 590 154 512 1.00e-52 194
Msa1127430 AT3G18600.1 33.889 360 232 5 234 590 90 446 2.49e-52 192
Msa1127430 AT5G62190.1 36.103 349 199 9 248 582 111 449 4.63e-50 187
Msa1127430 AT5G08610.1 33.693 371 228 11 235 590 384 751 1.18e-49 188
Msa1127430 AT2G45810.1 30.337 356 238 7 235 590 156 501 4.41e-49 181
Msa1127430 AT5G63630.2 33.155 374 234 8 235 594 250 621 4.66e-49 185
Msa1127430 AT3G61240.2 29.494 356 241 6 235 590 126 471 5.19e-49 181
Msa1127430 AT3G61240.1 29.494 356 241 6 235 590 126 471 5.19e-49 181
Msa1127430 AT5G63630.1 33.155 374 234 8 235 594 56 427 1.02e-48 180
Msa1127430 AT3G02065.1 30.108 372 242 7 262 623 2 365 7.84e-48 174
Msa1127430 AT3G53110.1 31.507 365 229 8 235 583 93 452 1.66e-47 176
Msa1127430 AT5G11170.1 31.268 355 228 9 235 583 48 392 2.81e-47 174
Msa1127430 AT5G11200.1 31.268 355 228 9 235 583 48 392 2.81e-47 174
Msa1127430 AT4G34910.1 33.248 391 204 8 233 572 46 430 3.81e-47 178
Msa1127430 AT4G09730.1 32.208 385 234 10 230 594 109 486 7.22e-47 177
Msa1127430 AT1G63250.1 32.626 377 237 9 233 594 328 702 9.11e-46 176
Msa1127430 AT5G08620.1 33.243 370 231 10 235 590 82 449 1.33e-45 172
Msa1127430 AT2G07750.1 32.626 377 237 9 233 594 375 749 1.46e-45 176
Msa1127430 AT5G54910.1 35.260 346 214 8 232 571 70 411 8.16e-45 172
Msa1127430 AT2G40700.1 30.159 441 222 15 234 594 31 465 7.85e-44 168
Msa1127430 AT1G71370.1 33.241 361 222 7 244 591 27 381 2.23e-43 166
Msa1127430 AT5G05450.1 33.151 365 221 9 244 588 27 388 3.03e-43 166
Msa1127430 AT5G11200.3 28.499 393 230 10 235 583 48 433 1.22e-42 162
Msa1127430 AT1G12770.2 28.928 401 229 8 233 579 110 508 6.74e-42 161
Msa1127430 AT1G12770.1 28.928 401 229 8 233 579 110 508 6.74e-42 161
Msa1127430 AT3G16840.2 30.807 409 215 11 242 583 200 607 3.76e-41 162
Msa1127430 AT3G16840.1 30.676 414 219 11 242 588 199 611 3.77e-41 162
Msa1127430 AT5G11200.2 27.737 411 228 12 235 583 48 451 1.03e-39 154
Msa1127430 AT5G11170.2 31.447 318 202 9 272 583 2 309 6.32e-39 148
Msa1127430 AT3G06980.1 27.229 415 269 10 210 595 351 761 8.84e-38 152
Msa1127430 AT1G71280.2 33.225 307 173 7 244 544 28 308 9.08e-35 135
Msa1127430 AT1G71280.1 32.704 318 182 7 244 555 28 319 2.48e-34 137
Msa1127430 AT1G51380.2 31.855 248 156 4 230 475 19 255 1.43e-31 125
Msa1127430 AT1G51380.4 33.645 214 133 3 230 441 19 225 4.38e-30 121
Msa1127430 AT1G51380.3 33.645 214 133 3 230 441 19 225 7.89e-30 120
Msa1127430 AT1G28180.2 49.138 116 56 1 263 375 3 118 2.43e-29 113
Msa1127430 AT4G15850.1 25.561 446 253 12 223 595 15 454 7.03e-26 113
Msa1127430 AT5G19210.2 28.058 417 236 17 227 597 68 466 2.38e-24 107
Msa1127430 AT1G59990.2 26.383 235 139 8 234 450 81 299 7.16e-17 85.1
Msa1127430 AT1G59990.1 26.383 235 139 8 234 450 81 299 9.50e-17 84.7
Msa1127430 AT2G28600.1 26.235 324 209 12 306 616 196 502 5.99e-15 79.0

Find 211 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTACCGGTTGTGCTTTC+TGG 0.101108 7_3:-79073411 Msa1127430:CDS
TTGAGGGCGAAGAAGGATTT+AGG 0.143289 7_3:-79074306 Msa1127430:CDS
TATTACTGAATCCTTCATTT+TGG 0.152380 7_3:+79070962 None:intergenic
CAACGAAGCTACTCCTAAAT+TGG 0.189044 7_3:+79071001 None:intergenic
TGAGAAATTGCCGTGGCTTC+TGG 0.210686 7_3:-79072812 Msa1127430:CDS
CGAGTTTCTGGTTAAATTAA+AGG 0.217247 7_3:+79074908 None:intergenic
ACCGCGTATGGTCGAGTTTC+TGG 0.230165 7_3:+79074896 None:intergenic
TGAGGGAGATAATGGAATTT+AGG 0.250084 7_3:+79074784 None:intergenic
AGTTTGGCTATTCGGGTATC+AGG 0.250256 7_3:-79073546 Msa1127430:CDS
CTTTGATATTGCTAAAGATA+TGG 0.286650 7_3:-79072542 Msa1127430:CDS
CAGGAATGATGTCCCAATTT+AGG 0.287222 7_3:-79071014 Msa1127430:CDS
ATAAAATTTGAGGGAGATAA+TGG 0.287590 7_3:+79074776 None:intergenic
ATATGCTTTAGCAAATTTCT+TGG 0.299619 7_3:+79073221 None:intergenic
TGGGTTTGCTCCACAAATTA+TGG 0.309744 7_3:-79073484 Msa1127430:CDS
CCTTCCTCCTTCTGAAGTTC+AGG 0.311889 7_3:+79073303 None:intergenic
TTCCGCAGGACGGGAGATTC+AGG 0.312404 7_3:-79071383 Msa1127430:intron
GTTGTTTGATTGTTCTTCTC+TGG 0.315342 7_3:+79074506 None:intergenic
TAGATATAAAGATGATTTAG+AGG 0.320038 7_3:-79074349 Msa1127430:CDS
ATAGGAAGAGTTTGGCTATT+CGG 0.322771 7_3:-79073554 Msa1127430:CDS
TCCACTTTCTCCTTCGGCTT+CGG 0.327604 7_3:+79074375 None:intergenic
ATCACCTTGATCAATCATTT+CGG 0.328986 7_3:+79072780 None:intergenic
TATACAATGCCAAGCTTTAC+CGG 0.334510 7_3:-79073424 Msa1127430:CDS
AATTCCACTAGTCAAAATTC+TGG 0.335286 7_3:-79070817 Msa1127430:CDS
TAGGAAGAGTTTGGCTATTC+GGG 0.336769 7_3:-79073553 Msa1127430:CDS
ACACTAGCTGGCTTTGTATC+TGG 0.337129 7_3:-79070910 Msa1127430:CDS
GGTGAAGTCTTGATTTGATT+TGG 0.344841 7_3:-79070567 Msa1127430:three_prime_UTR
TCACCTTGATCAATCATTTC+GGG 0.344876 7_3:+79072781 None:intergenic
AAGAAATTTGCTAAAGCATA+TGG 0.357035 7_3:-79073219 Msa1127430:CDS
CTATCTTCCACTTTCTCCTT+CGG 0.357308 7_3:+79074369 None:intergenic
TGAGGGCGAAGAAGGATTTA+GGG 0.361115 7_3:-79074305 Msa1127430:CDS
CGATCCATTAGATGCATTCA+TGG 0.362487 7_3:-79074433 Msa1127430:CDS
CCTTCCATGAATGCATCTAA+TGG 0.370763 7_3:+79074429 None:intergenic
GAGGAGTCACCTTCAATATC+AGG 0.374150 7_3:-79074081 Msa1127430:intron
AGCACGGTTTGCTGGTGAAT+TGG 0.382223 7_3:-79072437 Msa1127430:CDS
GGTGTGCGCGGAGTGGATTT+TGG 0.383444 7_3:-79071123 Msa1127430:CDS
TTCTTCTTGTCAAGAACAAT+AGG 0.387443 7_3:+79074171 None:intergenic
ATACGTGTCTCTGCTGTCTA+TGG 0.389174 7_3:-79073195 Msa1127430:CDS
TTTATAGCACCCATAATTTG+TGG 0.390337 7_3:+79073474 None:intergenic
AGCATGTCTATCAATCTTCC+AGG 0.392561 7_3:+79073108 None:intergenic
ATTGTATTGAGTACTGAAAA+AGG 0.392866 7_3:-79070490 Msa1127430:three_prime_UTR
AGCAAGATGTAACTGATTAT+AGG 0.393214 7_3:-79073572 Msa1127430:CDS
CTAGTGGAATTTACAGTTGA+AGG 0.393513 7_3:+79070829 None:intergenic
ATCGTGTGCAAGCTCAAGTT+AGG 0.394769 7_3:-79074751 Msa1127430:five_prime_UTR
AAGAGCAAGGTTTGGCGGTC+CGG 0.397692 7_3:+79072970 None:intergenic
GCATCATCTAACGCAGTTCC+AGG 0.398257 7_3:-79071066 Msa1127430:CDS
GGCATAGCGAAAACTGGTTC+TGG 0.399093 7_3:-79073375 Msa1127430:CDS
GCTTCGAAATTTCACTAAGA+AGG 0.405131 7_3:+79074721 None:intergenic
GAATGTGTCCACGGAGTTGA+TGG 0.406543 7_3:-79072389 Msa1127430:CDS
CTGGTTAAATTAAAGGATGA+AGG 0.407853 7_3:+79074915 None:intergenic
GGATGAAATTGAAGCACAAT+TGG 0.408212 7_3:-79072725 Msa1127430:CDS
GCTGATCGAATGTTTGATCT+TGG 0.409409 7_3:-79073033 Msa1127430:CDS
ATCATTGGCATAGCGAAAAC+TGG 0.412683 7_3:-79073381 Msa1127430:CDS
AAGTTCGGATTCGAAGGTTT+CGG 0.413016 7_3:-79074663 Msa1127430:CDS
TCTCCCACTGTCACTCTGAT+AGG 0.413022 7_3:+79072892 None:intergenic
GGGTTTGCTCCACAAATTAT+GGG 0.419490 7_3:-79073483 Msa1127430:CDS
GATGGCCTTCGCCTTTCTCT+AGG 0.422928 7_3:+79070665 None:intergenic
AACTGATTATAGGAAGAGTT+TGG 0.423334 7_3:-79073562 Msa1127430:CDS
CAGAAGGAGGAAGGTCCTAT+AGG 0.424404 7_3:-79073294 Msa1127430:CDS
AGAAAAGGCAAAGGCAGAGG+TGG 0.426446 7_3:-79071162 Msa1127430:CDS
GTTCATCGCATTGGAAGAAC+AGG 0.434588 7_3:-79072511 Msa1127430:CDS
TTTGTATCTGGTGGATCAAT+TGG 0.445406 7_3:-79070898 Msa1127430:CDS
TCCTATGATCGTGCATATCA+TGG 0.445806 7_3:-79073331 Msa1127430:CDS
AAATGTTTGAGCCTTGGCTC+TGG 0.447230 7_3:+79070445 None:intergenic
ATGAAGGTGAAGGCGAGTAT+AGG 0.448263 7_3:+79074931 None:intergenic
GCTGTAAATTCTCTGCGAAC+AGG 0.449877 7_3:-79071033 Msa1127430:CDS
TTGCAGAAAAGAGCAAGGTT+TGG 0.450948 7_3:+79072962 None:intergenic
GTATGATCAAGAGGAGCAAT+AGG 0.454941 7_3:+79074141 None:intergenic
GCTGCTAAAGCCGTGGATGC+TGG 0.457028 7_3:-79074222 Msa1127430:CDS
TCCATGATATGCACGATCAT+AGG 0.458040 7_3:+79073330 None:intergenic
GTTAATAGCTTAGTTGCTGC+TGG 0.458763 7_3:-79072415 Msa1127430:CDS
TATCTGATGTGCCAATTCTC+TGG 0.460585 7_3:+79073254 None:intergenic
TTCTCCTTCGGCTTCGGTGG+CGG 0.461021 7_3:+79074381 None:intergenic
GAGAGAAAATGTTTGAGCCT+TGG 0.462374 7_3:+79070439 None:intergenic
ATGTGCACCTACCAGAGAAT+TGG 0.464889 7_3:-79073265 Msa1127430:CDS
AGAGAAAGGCGAAGGCCATC+AGG 0.465859 7_3:-79070662 Msa1127430:CDS
CTGGTCAGAACAACACGAAC+AGG 0.473022 7_3:-79070786 Msa1127430:intron
AACGAAGCTACTCCTAAATT+GGG 0.473246 7_3:+79071002 None:intergenic
GTTAAATTACCTGATATTGA+AGG 0.475683 7_3:+79074072 None:intergenic
GGTGCACATATCACTCCTAT+AGG 0.477608 7_3:+79073279 None:intergenic
CACACGATAAATAAAATTTG+AGG 0.479547 7_3:+79074766 None:intergenic
CTGTTCGTGTTGTTCTGACC+AGG 0.479959 7_3:+79070787 None:intergenic
AAGGCGAAGGCCATCAGGTT+GGG 0.481451 7_3:-79070657 Msa1127430:CDS
TGCTGCCCTGCATGGTGATA+AGG 0.489958 7_3:-79072683 Msa1127430:CDS
ATTGGAAGAACAGGCCGTGC+TGG 0.490716 7_3:-79072502 Msa1127430:CDS
GAGATGTCGAAGAGAAAGTT+CGG 0.490965 7_3:-79074678 Msa1127430:CDS
GGGAGAAAAGGCAAAGGCAG+AGG 0.492204 7_3:-79071165 Msa1127430:CDS
CAAAATTCTGGAGTAAATCC+TGG 0.496585 7_3:-79070805 Msa1127430:CDS
ACACGATAAATAAAATTTGA+GGG 0.499452 7_3:+79074767 None:intergenic
TTGGATTTGAGCCGCAAGTA+AGG 0.501136 7_3:-79073014 Msa1127430:CDS
GTTGATGGATCTTGCTATGA+AGG 0.502001 7_3:-79072374 Msa1127430:intron
AATAAGAGACCAACACTAGC+TGG 0.504667 7_3:-79070922 Msa1127430:CDS
GTATCTGGTGGATCAATTGG+CGG 0.505944 7_3:-79070895 Msa1127430:CDS
CTCTTCACAACCACCACCAC+CGG 0.506306 7_3:+79074464 None:intergenic
TTGAGATCGTTCGAAACTAT+AGG 0.506823 7_3:+79074623 None:intergenic
GAATTTACAGTTGAAGGAGC+AGG 0.508575 7_3:+79070835 None:intergenic
TCTCTACCAGAAAGCACAAC+CGG 0.508638 7_3:+79073405 None:intergenic
AAAGGCAAAGGCAGAGGTGG+GGG 0.509419 7_3:-79071159 Msa1127430:CDS
TTTAGGGTTGACGTTGGCGT+CGG 0.513585 7_3:-79074289 Msa1127430:CDS
GTATGAATGCTCATATTTGT+AGG 0.515560 7_3:-79070588 Msa1127430:three_prime_UTR
GCGTCGGATGCGTTGCATGC+TGG 0.516063 7_3:-79074273 Msa1127430:CDS
GAGATAGTTGTTGCTACGCC+TGG 0.517266 7_3:-79073126 Msa1127430:CDS
CTTTCTGGTAGAGATATCAT+TGG 0.519087 7_3:-79073396 Msa1127430:CDS
CATCGTACTCGATGTTATCA+AGG 0.519589 7_3:+79074535 None:intergenic
GAAAAGGCAAAGGCAGAGGT+GGG 0.521254 7_3:-79071161 Msa1127430:CDS
GACAGTGGGAGAGGTGGGGA+TGG 0.524042 7_3:-79072881 Msa1127430:CDS
AACGATGATAACGCCGGTGG+TGG 0.525263 7_3:-79074477 Msa1127430:CDS
GACATGCATGTTCATCGCAT+TGG 0.527240 7_3:-79072520 Msa1127430:CDS
AATACACGAGGAGATGAAAT+CGG 0.527640 7_3:-79074406 Msa1127430:CDS
GCAAAGTCGAAAAGTTAGCC+AGG 0.529230 7_3:-79072930 Msa1127430:CDS
TCAAAACGAGATGCAAGAAA+AGG 0.529472 7_3:-79071360 Msa1127430:CDS
ATTGATCCTTATCACCATGC+AGG 0.531053 7_3:+79072677 None:intergenic
TTTGGAGCTATGGGTAGTAG+TGG 0.533197 7_3:+79074843 None:intergenic
TATCAGAGTGACAGTGGGAG+AGG 0.534863 7_3:-79072890 Msa1127430:CDS
TAAGGATCAATCTTCTCGTA+TGG 0.538960 7_3:-79072665 Msa1127430:CDS
CAGAAAAGAGCAAGGTTTGG+CGG 0.539484 7_3:+79072965 None:intergenic
CGAAACTATAGGTAGATTGA+CGG 0.541969 7_3:+79074634 None:intergenic
AGAGTGACAGTGGGAGAGGT+GGG 0.542580 7_3:-79072886 Msa1127430:CDS
AAAGCACAACCGGTAAAGCT+TGG 0.543465 7_3:+79073415 None:intergenic
GATGAAATTGAAGCACAATT+GGG 0.543605 7_3:-79072724 Msa1127430:CDS
AAGAGAAAGTTCGGATTCGA+AGG 0.543644 7_3:-79074669 Msa1127430:CDS
TGGGGTCGTACTCATGATAG+AGG 0.543749 7_3:+79070410 None:intergenic
TCATCAACCTCCCAAAATGA+AGG 0.545123 7_3:-79070973 Msa1127430:CDS
ACTTTCTCCTTCGGCTTCGG+TGG 0.546367 7_3:+79074378 None:intergenic
ACCGAAGCCGAAGGAGAAAG+TGG 0.547284 7_3:-79074376 Msa1127430:CDS
ATCAATCAAACCAGCATCCA+CGG 0.550510 7_3:+79074212 None:intergenic
TCGTGTGCAAGCTCAAGTTA+GGG 0.551061 7_3:-79074750 Msa1127430:five_prime_UTR
TTACCCGAAATGATTGATCA+AGG 0.552029 7_3:-79072784 Msa1127430:CDS
GATGATAACGCCGGTGGTGG+TGG 0.552916 7_3:-79074474 Msa1127430:CDS
CGTTGTCTTCGAAATTGTCG+TGG 0.555230 7_3:+79074559 None:intergenic
CACTGTCACTCTGATAGGAT+CGG 0.557327 7_3:+79072897 None:intergenic
AATGCTCAGAGCAACTTACC+TGG 0.557941 7_3:-79073067 Msa1127430:CDS
GCTACTGATGTTGCCGCTCG+TGG 0.558152 7_3:-79072598 Msa1127430:CDS
AAAGGCGAAGGCCATCAGGT+TGG 0.560748 7_3:-79070658 Msa1127430:CDS
CAGAGTGACAGTGGGAGAGG+TGG 0.564403 7_3:-79072887 Msa1127430:CDS
AACAGGCCGTGCTGGTGACA+AGG 0.564433 7_3:-79072494 Msa1127430:CDS
AAAAGGCAAAGGCAGAGGTG+GGG 0.567265 7_3:-79071160 Msa1127430:CDS
GTTGTTGTTCCCACCGCGTA+TGG 0.569328 7_3:+79074884 None:intergenic
TGGCAAAGGTGTGCGCGGAG+TGG 0.570105 7_3:-79071130 Msa1127430:CDS
CATTGTTGCAGAAAAGAGCA+AGG 0.570141 7_3:+79072957 None:intergenic
TGATGTGCCAATTCTCTGGT+AGG 0.570886 7_3:+79073258 None:intergenic
TCAATCTCAGTATGATCAAG+AGG 0.572016 7_3:+79074132 None:intergenic
TATTATCAATTGATAGAGCA+TGG 0.572994 7_3:-79070540 Msa1127430:three_prime_UTR
CGTGTCTCTGCTGTCTATGG+TGG 0.576322 7_3:-79073192 Msa1127430:CDS
TTTAAAGTTGCTGCCCTGCA+TGG 0.578481 7_3:-79072691 Msa1127430:CDS
GGTAATTTCTCCAGAAGCCA+CGG 0.578486 7_3:+79072802 None:intergenic
GGTCCATCGTTGGTCAGATT+AGG 0.580274 7_3:-79072993 Msa1127430:CDS
CCATTAGATGCATTCATGGA+AGG 0.582173 7_3:-79074429 Msa1127430:CDS
GTTTGGCTATTCGGGTATCA+GGG 0.582805 7_3:-79073545 Msa1127430:CDS
GGATCAGCCTGAACTTCAGA+AGG 0.585907 7_3:-79073310 Msa1127430:CDS
TGATTTAGAGGATGATCCAA+TGG 0.586529 7_3:-79074337 Msa1127430:CDS
GGCGCCGCCACCGAAGCCGA+AGG 0.588262 7_3:-79074385 Msa1127430:CDS
AACTTACCTGGTGCTTGATG+AGG 0.590884 7_3:-79073055 Msa1127430:CDS
TGTTGTGTAGGTGGGAGAAA+AGG 0.593082 7_3:-79071177 Msa1127430:intron
CAGTTCAAAGAACTCAAGGC+AGG 0.593420 7_3:-79073153 Msa1127430:CDS
GCAGGTGGCAAAGGTGTGCG+CGG 0.596293 7_3:-79071135 Msa1127430:CDS
CATCGTTGGTCAGATTAGGC+CGG 0.596590 7_3:-79072989 Msa1127430:CDS
CGGTGGTGGTGGTTGTGAAG+AGG 0.599336 7_3:-79074463 Msa1127430:CDS
ACCAGAAACTCGACCATACG+CGG 0.600091 7_3:-79074897 Msa1127430:five_prime_UTR
AGGATCGGAAAGGATTTCCC+TGG 0.600410 7_3:+79072912 None:intergenic
TTTACAGCAGCAGACCGACC+TGG 0.602830 7_3:+79071048 None:intergenic
GCAGTTCTAAACCTAGAGAA+AGG 0.605177 7_3:-79070676 Msa1127430:intron
GTCGTACTCATGATAGAGGT+AGG 0.605754 7_3:+79070414 None:intergenic
ATTCAGTAATAATACAAGCA+TGG 0.605916 7_3:-79070950 Msa1127430:CDS
GGCCGTGCTGGTGACAAGGA+CGG 0.606801 7_3:-79072490 Msa1127430:CDS
CTAGCTGGCTTTGTATCTGG+TGG 0.609199 7_3:-79070907 Msa1127430:CDS
AGCAATATCAAAGTTTACCA+CGG 0.609796 7_3:+79072552 None:intergenic
GATCAGCCTCATCAAGCACC+AGG 0.611022 7_3:+79073049 None:intergenic
GGCAATTTCTCAGAATCAGA+AGG 0.613201 7_3:+79072823 None:intergenic
AGTAGCAATAAGCACATGGT+AGG 0.613217 7_3:+79072615 None:intergenic
CCTGAACTTCAGAAGGAGGA+AGG 0.614956 7_3:-79073303 Msa1127430:CDS
TTGATCCTTATCACCATGCA+GGG 0.615126 7_3:+79072678 None:intergenic
TGAACAGTTCAAAGAACTCA+AGG 0.617345 7_3:-79073157 Msa1127430:CDS
CTGATTCTGAGAAATTGCCG+TGG 0.618831 7_3:-79072819 Msa1127430:CDS
AACTATCTATCCCAACCTGA+TGG 0.619017 7_3:+79070647 None:intergenic
CGATCCTATCAGAGTGACAG+TGG 0.622612 7_3:-79072896 Msa1127430:CDS
GAAGGATTTAGGGTTGACGT+TGG 0.628406 7_3:-79074295 Msa1127430:CDS
CGGCCTAATCTGACCAACGA+TGG 0.632293 7_3:+79072990 None:intergenic
CATCTAACGCAGTTCCAGGT+CGG 0.632676 7_3:-79071062 Msa1127430:CDS
CATCAGTAGCAATAAGCACA+TGG 0.632724 7_3:+79072611 None:intergenic
CTTGATGTCAAGACCACGAG+CGG 0.633460 7_3:+79072585 None:intergenic
GGAGGAACGTAAAGACGTTG+AGG 0.634079 7_3:+79074597 None:intergenic
TTATGCTGCTGCTAAAGCCG+TGG 0.635330 7_3:-79074229 Msa1127430:CDS
CTCCGTCCTTGTCACCAGCA+CGG 0.638268 7_3:+79072488 None:intergenic
AAACGAGATGCAAGAAAAGG+AGG 0.638810 7_3:-79071357 Msa1127430:intron
CAAAGTCGAAAAGTTAGCCA+GGG 0.638925 7_3:-79072929 Msa1127430:CDS
GTATAGATATTCCAGAGCCA+AGG 0.641050 7_3:-79070456 Msa1127430:three_prime_UTR
GATACAAAGCCAGCTAGTGT+TGG 0.641121 7_3:+79070913 None:intergenic
AAATTAAAGGATGAAGGTGA+AGG 0.641369 7_3:+79074921 None:intergenic
TGCTGGTCAGAATGTGTCCA+CGG 0.644595 7_3:-79072398 Msa1127430:CDS
TCAGCCTGAACTTCAGAAGG+AGG 0.650481 7_3:-79073307 Msa1127430:CDS
TCACTCTGATAGGATCGGAA+AGG 0.651428 7_3:+79072902 None:intergenic
CTAAACCTAGAGAAAGGCGA+AGG 0.655176 7_3:-79070670 Msa1127430:CDS
TGGATATGATTCTGATGAGG+AGG 0.658341 7_3:-79074253 Msa1127430:CDS
TGCTTCAATTTCATCCACAG+TGG 0.658468 7_3:+79072732 None:intergenic
CCGCAAGTAAGGTCCATCGT+TGG 0.658844 7_3:-79073003 Msa1127430:CDS
CATCAAGTCAATTAAAACCG+TGG 0.659638 7_3:-79072569 Msa1127430:CDS
GGCACATCAGATATATCTCG+AGG 0.663704 7_3:-79073244 Msa1127430:CDS
GCTTGGCATTGTATAGACGT+CGG 0.665885 7_3:+79073432 None:intergenic
GAGTGACAGTGGGAGAGGTG+GGG 0.667890 7_3:-79072885 Msa1127430:CDS
ATGGGTGCTATAAAGAAACA+AGG 0.668755 7_3:-79073465 Msa1127430:CDS
AGCAAGATCCATCAACTCCG+TGG 0.674249 7_3:+79072381 None:intergenic
GATCCTATCAGAGTGACAGT+GGG 0.686740 7_3:-79072895 Msa1127430:CDS
GAAGCACAATTGGGTCAGAG+AGG 0.693962 7_3:-79072715 Msa1127430:CDS
GGAACGTAAAGACGTTGAGG+AGG 0.696141 7_3:+79074600 None:intergenic
AACAACAACGATGATAACGC+CGG 0.697728 7_3:-79074483 Msa1127430:CDS
TGCTGGATATGATTCTGATG+AGG 0.699809 7_3:-79074256 Msa1127430:CDS
CATACACTCGAGTTTGACAG+CGG 0.706150 7_3:+79070606 None:intergenic
CCAACGATGGACCTTACTTG+CGG 0.706917 7_3:+79073003 None:intergenic
AACAACGATGATAACGCCGG+TGG 0.714203 7_3:-79074480 Msa1127430:CDS
GTAGGTGGGAGAAAAGGCAA+AGG 0.721472 7_3:-79071171 Msa1127430:intron
ATTCATGGAAGGAATACACG+AGG 0.768621 7_3:-79074418 Msa1127430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATTAATGTATTCAA+TGG - chr7_3:79073206-79073225 Msa1127430:CDS 10.0%
!! AACATAAAAATAGAATTTCA+TGG + chr7_3:79071309-79071328 None:intergenic 15.0%
!!! ATTTTACAGAAATTTAAATC+TGG - chr7_3:79072711-79072730 Msa1127430:CDS 15.0%
!!! TTAGTACATATTTTTTGAAA+TGG - chr7_3:79073183-79073202 Msa1127430:CDS 15.0%
!! TAAAGAAGTAAAGATTATTA+GGG + chr7_3:79073712-79073731 None:intergenic 15.0%
!!! AAAAAGAAGGGTTTTAATTT+TGG + chr7_3:79070529-79070548 None:intergenic 20.0%
!! TTGAGTTTGAATAAAAAGAA+GGG + chr7_3:79070541-79070560 None:intergenic 20.0%
!! ACACGATAAATAAAATTTGA+GGG + chr7_3:79070587-79070606 None:intergenic 20.0%
!! TAGATATAAAGATGATTTAG+AGG - chr7_3:79071002-79071021 Msa1127430:CDS 20.0%
!! TCATAAAAATCCTTGTTAAA+AGG + chr7_3:79071252-79071271 None:intergenic 20.0%
!!! TTTTAACAAGGATTTTTATG+AGG - chr7_3:79071251-79071270 Msa1127430:intron 20.0%
!!! TTAAGTTGATTATTCAAACA+GGG + chr7_3:79071425-79071444 None:intergenic 20.0%
!!! ATTAAGTTGATTATTCAAAC+AGG + chr7_3:79071426-79071445 None:intergenic 20.0%
!! TGAAGAAAAAATACTGTATA+GGG + chr7_3:79073011-79073030 None:intergenic 20.0%
!! ATGAAGAAAAAATACTGTAT+AGG + chr7_3:79073012-79073031 None:intergenic 20.0%
!! TATATTAATGTATTCAATGG+TGG - chr7_3:79073209-79073228 Msa1127430:CDS 20.0%
!! GATAGAAGTTATATATCTAT+AGG - chr7_3:79073274-79073293 Msa1127430:CDS 20.0%
!!! ATCTATTTGATTGAACATTT+TGG - chr7_3:79073457-79073476 Msa1127430:CDS 20.0%
!!! TGAACATTTTGGTAAAATTA+TGG - chr7_3:79073468-79073487 Msa1127430:CDS 20.0%
!! CTAAAGAAGTAAAGATTATT+AGG + chr7_3:79073713-79073732 None:intergenic 20.0%
!! TATAAGATTTAGATATCTCT+TGG - chr7_3:79073909-79073928 Msa1127430:intron 20.0%
!! ATAAGATTTAGATATCTCTT+GGG - chr7_3:79073910-79073929 Msa1127430:intron 20.0%
! GTTGAGTTTGAATAAAAAGA+AGG + chr7_3:79070542-79070561 None:intergenic 25.0%
! ATAAAATTTGAGGGAGATAA+TGG + chr7_3:79070578-79070597 None:intergenic 25.0%
! CACACGATAAATAAAATTTG+AGG + chr7_3:79070588-79070607 None:intergenic 25.0%
! GTTAAATTACCTGATATTGA+AGG + chr7_3:79071282-79071301 None:intergenic 25.0%
!!! TAAGTTGATTATTCAAACAG+GGG + chr7_3:79071424-79071443 None:intergenic 25.0%
! ATATGCTTTAGCAAATTTCT+TGG + chr7_3:79072133-79072152 None:intergenic 25.0%
!!! AAGAAATTTGCTAAAGCATA+TGG - chr7_3:79072132-79072151 Msa1127430:intron 25.0%
!!! ATTAGTTTTTGCTTCCAAAA+AGG - chr7_3:79072596-79072615 Msa1127430:CDS 25.0%
! CTTTGATATTGCTAAAGATA+TGG - chr7_3:79072809-79072828 Msa1127430:CDS 25.0%
! TTATAACTCAAAAAGAAGCA+CGG - chr7_3:79072898-79072917 Msa1127430:CDS 25.0%
! CAAAACCAACAATAATCAAA+GGG + chr7_3:79073086-79073105 None:intergenic 25.0%
!!! GCTTTTTTCAAAAGATGAAA+TGG - chr7_3:79073355-79073374 Msa1127430:CDS 25.0%
! AGTTTATATTCAACTACTCA+CGG + chr7_3:79073409-79073428 None:intergenic 25.0%
! TTGGTAAAATTATGGTAGAA+TGG - chr7_3:79073476-79073495 Msa1127430:CDS 25.0%
!!! TAGAATGGACTTGTTTTTTA+GGG - chr7_3:79073491-79073510 Msa1127430:CDS 25.0%
! CTAAAATATATTTGACTGCT+TGG - chr7_3:79073515-79073534 Msa1127430:CDS 25.0%
! GTTTGGATGAGAATAAAATT+AGG - chr7_3:79073558-79073577 Msa1127430:CDS 25.0%
!! GGTCGAACTAATATATTTTT+CGG + chr7_3:79073742-79073761 None:intergenic 25.0%
! TATAGTCATAACAAGTCAAA+TGG + chr7_3:79073763-79073782 None:intergenic 25.0%
!! ATTACTGAATCCTTCATTTT+GGG + chr7_3:79074391-79074410 None:intergenic 25.0%
!! TATTACTGAATCCTTCATTT+TGG + chr7_3:79074392-79074411 None:intergenic 25.0%
! ATTCAGTAATAATACAAGCA+TGG - chr7_3:79074401-79074420 Msa1127430:CDS 25.0%
! TATTATCAATTGATAGAGCA+TGG - chr7_3:79074811-79074830 Msa1127430:five_prime_UTR 25.0%
!!! ATTGTATTGAGTACTGAAAA+AGG - chr7_3:79074861-79074880 Msa1127430:five_prime_UTR 25.0%
AAATTAAAGGATGAAGGTGA+AGG + chr7_3:79070433-79070452 None:intergenic 30.0%
CTGGTTAAATTAAAGGATGA+AGG + chr7_3:79070439-79070458 None:intergenic 30.0%
!! CGAGTTTCTGGTTAAATTAA+AGG + chr7_3:79070446-79070465 None:intergenic 30.0%
!!! GGTTTTAATTTTGGAGCTAT+GGG + chr7_3:79070520-79070539 None:intergenic 30.0%
TTCTTCTTGTCAAGAACAAT+AGG + chr7_3:79071183-79071202 None:intergenic 30.0%
! TGATTATCAGCCTTTTAACA+AGG - chr7_3:79071239-79071258 Msa1127430:intron 30.0%
! TGTGTGTTGATATTTCACAT+GGG - chr7_3:79071382-79071401 Msa1127430:intron 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr7_3:79071552-79071571 Msa1127430:intron 30.0%
!! ATGTGGACATTAGTTGTTTT+CGG + chr7_3:79071596-79071615 None:intergenic 30.0%
TATTGAAAGAGCTAATGATG+TGG + chr7_3:79071613-79071632 None:intergenic 30.0%
AGCAAGATGTAACTGATTAT+AGG - chr7_3:79071779-79071798 Msa1127430:intron 30.0%
AACTGATTATAGGAAGAGTT+TGG - chr7_3:79071789-79071808 Msa1127430:intron 30.0%
!!! TCAAATGTTTTTACTGGCTT+AGG + chr7_3:79071841-79071860 None:intergenic 30.0%
TAAGCCAGTAAAAACATTTG+AGG - chr7_3:79071840-79071859 Msa1127430:intron 30.0%
TAAAAACATTTGAGGACTGT+GGG - chr7_3:79071848-79071867 Msa1127430:intron 30.0%
TTTATAGCACCCATAATTTG+TGG + chr7_3:79071880-79071899 None:intergenic 30.0%
GATAGACATGCTAAAAATGA+AGG - chr7_3:79072254-79072273 Msa1127430:intron 30.0%
ATCACCTTGATCAATCATTT+CGG + chr7_3:79072574-79072593 None:intergenic 30.0%
GATGAAATTGAAGCACAATT+GGG - chr7_3:79072627-79072646 Msa1127430:CDS 30.0%
AGCAATATCAAAGTTTACCA+CGG + chr7_3:79072802-79072821 None:intergenic 30.0%
CCAAAACCAACAATAATCAA+AGG + chr7_3:79073087-79073106 None:intergenic 30.0%
!!! CCTTTGATTATTGTTGGTTT+TGG - chr7_3:79073084-79073103 Msa1127430:CDS 30.0%
! TTTTGCCTGTAAATAGCATA+GGG + chr7_3:79073150-79073169 None:intergenic 30.0%
! TTTTTGCCTGTAAATAGCAT+AGG + chr7_3:79073151-79073170 None:intergenic 30.0%
ATATCTATAGGTTTGACTGT+TGG - chr7_3:79073286-79073305 Msa1127430:CDS 30.0%
!!! GTAGAATGGACTTGTTTTTT+AGG - chr7_3:79073490-79073509 Msa1127430:CDS 30.0%
AAGTAAAGATTATTAGGGAG+AGG + chr7_3:79073707-79073726 None:intergenic 30.0%
GTAATATCAGTATGCTTGAT+TGG - chr7_3:79074126-79074145 Msa1127430:CDS 30.0%
TTACATTTCTTGTGTTGTGT+AGG - chr7_3:79074162-79074181 Msa1127430:CDS 30.0%
AATTCCACTAGTCAAAATTC+TGG - chr7_3:79074534-79074553 Msa1127430:CDS 30.0%
GTATGAATGCTCATATTTGT+AGG - chr7_3:79074763-79074782 Msa1127430:five_prime_UTR 30.0%
!!! GGGTTTTAATTTTGGAGCTA+TGG + chr7_3:79070521-79070540 None:intergenic 35.0%
!! TGAGGGAGATAATGGAATTT+AGG + chr7_3:79070570-79070589 None:intergenic 35.0%
GCTTCGAAATTTCACTAAGA+AGG + chr7_3:79070633-79070652 None:intergenic 35.0%
CGAAACTATAGGTAGATTGA+CGG + chr7_3:79070720-79070739 None:intergenic 35.0%
TTGAGATCGTTCGAAACTAT+AGG + chr7_3:79070731-79070750 None:intergenic 35.0%
GTTGTTTGATTGTTCTTCTC+TGG + chr7_3:79070848-79070867 None:intergenic 35.0%
AATACACGAGGAGATGAAAT+CGG - chr7_3:79070945-79070964 Msa1127430:CDS 35.0%
TGATTTAGAGGATGATCCAA+TGG - chr7_3:79071014-79071033 Msa1127430:CDS 35.0%
!!! ATCCAATGGAGAGTTTTTTG+AGG - chr7_3:79071028-79071047 Msa1127430:CDS 35.0%
!!! TCCAATGGAGAGTTTTTTGA+GGG - chr7_3:79071029-79071048 Msa1127430:CDS 35.0%
TCAATCTCAGTATGATCAAG+AGG + chr7_3:79071222-79071241 None:intergenic 35.0%
! GTGTGTGTTGATATTTCACA+TGG - chr7_3:79071381-79071400 Msa1127430:intron 35.0%
! TTATTCAAACAGGGGTGTAA+TGG + chr7_3:79071416-79071435 None:intergenic 35.0%
TTTCAATAAGCTGTCCCTAA+CGG - chr7_3:79071625-79071644 Msa1127430:intron 35.0%
CAACTTATAACATAGAGGCT+AGG + chr7_3:79071702-79071721 None:intergenic 35.0%
GCACTCAACTTATAACATAG+AGG + chr7_3:79071707-79071726 None:intergenic 35.0%
ATAGGAAGAGTTTGGCTATT+CGG - chr7_3:79071797-79071816 Msa1127430:intron 35.0%
!! CAGTCCTCAAATGTTTTTAC+TGG + chr7_3:79071847-79071866 None:intergenic 35.0%
GTAAAAACATTTGAGGACTG+TGG - chr7_3:79071847-79071866 Msa1127430:intron 35.0%
! ATGGGTGCTATAAAGAAACA+AGG - chr7_3:79071886-79071905 Msa1127430:intron 35.0%
TATACAATGCCAAGCTTTAC+CGG - chr7_3:79071927-79071946 Msa1127430:intron 35.0%
! CTTTCTGGTAGAGATATCAT+TGG - chr7_3:79071955-79071974 Msa1127430:intron 35.0%
TGAACAGTTCAAAGAACTCA+AGG - chr7_3:79072194-79072213 Msa1127430:intron 35.0%
TTACCCGAAATGATTGATCA+AGG - chr7_3:79072567-79072586 Msa1127430:CDS 35.0%
TCACCTTGATCAATCATTTC+GGG + chr7_3:79072573-79072592 None:intergenic 35.0%
GGATGAAATTGAAGCACAAT+TGG - chr7_3:79072626-79072645 Msa1127430:CDS 35.0%
TAAGGATCAATCTTCTCGTA+TGG - chr7_3:79072686-79072705 Msa1127430:CDS 35.0%
CATCAAGTCAATTAAAACCG+TGG - chr7_3:79072782-79072801 Msa1127430:CDS 35.0%
CGTATCCCTTTGATTATTGT+TGG - chr7_3:79073078-79073097 Msa1127430:CDS 35.0%
AATAGCATAGGGGGATAAAT+GGG + chr7_3:79073139-79073158 None:intergenic 35.0%
AAATAGCATAGGGGGATAAA+TGG + chr7_3:79073140-79073159 None:intergenic 35.0%
TTTGCCTGTAAATAGCATAG+GGG + chr7_3:79073149-79073168 None:intergenic 35.0%
!! AATGTATTCAATGGTGGACA+AGG - chr7_3:79073215-79073234 Msa1127430:CDS 35.0%
!! AAGGTTAGTTTCTAAGAAGC+TGG - chr7_3:79073234-79073253 Msa1127430:CDS 35.0%
!! TTTTCTATAGTGCTGCTACT+TGG - chr7_3:79073657-79073676 Msa1127430:intron 35.0%
! TTTCTATAGTGCTGCTACTT+GGG - chr7_3:79073658-79073677 Msa1127430:intron 35.0%
! TTATTAGGGAGAGGTTTTTG+TGG + chr7_3:79073698-79073717 None:intergenic 35.0%
CGTCACAATTCATATGTCAT+TGG - chr7_3:79073848-79073867 Msa1127430:intron 35.0%
! ATTTTGTCTTCTAATTCCGC+AGG - chr7_3:79073954-79073973 Msa1127430:intron 35.0%
TCAAAACGAGATGCAAGAAA+AGG - chr7_3:79073991-79074010 Msa1127430:intron 35.0%
ATTTCTTGTGTTGTGTAGGT+GGG - chr7_3:79074166-79074185 Msa1127430:CDS 35.0%
AACGAAGCTACTCCTAAATT+GGG + chr7_3:79074352-79074371 None:intergenic 35.0%
! TTTGTATCTGGTGGATCAAT+TGG - chr7_3:79074453-79074472 Msa1127430:CDS 35.0%
CTAGTGGAATTTACAGTTGA+AGG + chr7_3:79074525-79074544 None:intergenic 35.0%
!!! TACTCCAGAATTTTGACTAG+TGG + chr7_3:79074541-79074560 None:intergenic 35.0%
!! CAAAATTCTGGAGTAAATCC+TGG - chr7_3:79074546-79074565 Msa1127430:CDS 35.0%
! GGTGAAGTCTTGATTTGATT+TGG - chr7_3:79074784-79074803 Msa1127430:five_prime_UTR 35.0%
GAGATGTCGAAGAGAAAGTT+CGG - chr7_3:79070673-79070692 Msa1127430:CDS 40.0%
AAGAGAAAGTTCGGATTCGA+AGG - chr7_3:79070682-79070701 Msa1127430:intron 40.0%
AAGTTCGGATTCGAAGGTTT+CGG - chr7_3:79070688-79070707 Msa1127430:intron 40.0%
CATCGTACTCGATGTTATCA+AGG + chr7_3:79070819-79070838 None:intergenic 40.0%
! AACAACAACGATGATAACGC+CGG - chr7_3:79070868-79070887 Msa1127430:CDS 40.0%
CGATCCATTAGATGCATTCA+TGG - chr7_3:79070918-79070937 Msa1127430:CDS 40.0%
CCTTCCATGAATGCATCTAA+TGG + chr7_3:79070925-79070944 None:intergenic 40.0%
CCATTAGATGCATTCATGGA+AGG - chr7_3:79070922-79070941 Msa1127430:CDS 40.0%
ATTCATGGAAGGAATACACG+AGG - chr7_3:79070933-79070952 Msa1127430:CDS 40.0%
CTATCTTCCACTTTCTCCTT+CGG + chr7_3:79070985-79071004 None:intergenic 40.0%
TGCTGGATATGATTCTGATG+AGG - chr7_3:79071095-79071114 Msa1127430:CDS 40.0%
TGGATATGATTCTGATGAGG+AGG - chr7_3:79071098-79071117 Msa1127430:CDS 40.0%
ATCAATCAAACCAGCATCCA+CGG + chr7_3:79071142-79071161 None:intergenic 40.0%
GTATGATCAAGAGGAGCAAT+AGG + chr7_3:79071213-79071232 None:intergenic 40.0%
AAGCTATCTTGGAGAGCTTA+TGG - chr7_3:79071563-79071582 Msa1127430:intron 40.0%
! GTGTTTTGTGTGCTTGATAC+AGG - chr7_3:79071748-79071767 Msa1127430:intron 40.0%
TAGGAAGAGTTTGGCTATTC+GGG - chr7_3:79071798-79071817 Msa1127430:intron 40.0%
! TGGGTTTGCTCCACAAATTA+TGG - chr7_3:79071867-79071886 Msa1127430:intron 40.0%
! GGGTTTGCTCCACAAATTAT+GGG - chr7_3:79071868-79071887 Msa1127430:intron 40.0%
ATCATTGGCATAGCGAAAAC+TGG - chr7_3:79071970-79071989 Msa1127430:intron 40.0%
TCCTATGATCGTGCATATCA+TGG - chr7_3:79072020-79072039 Msa1127430:intron 40.0%
TCCATGATATGCACGATCAT+AGG + chr7_3:79072024-79072043 None:intergenic 40.0%
TATCTGATGTGCCAATTCTC+TGG + chr7_3:79072100-79072119 None:intergenic 40.0%
AGCATGTCTATCAATCTTCC+AGG + chr7_3:79072246-79072265 None:intergenic 40.0%
GCTGATCGAATGTTTGATCT+TGG - chr7_3:79072318-79072337 Msa1127430:intron 40.0%
TTGCAGAAAAGAGCAAGGTT+TGG + chr7_3:79072392-79072411 None:intergenic 40.0%
CATTGTTGCAGAAAAGAGCA+AGG + chr7_3:79072397-79072416 None:intergenic 40.0%
CAAAGTCGAAAAGTTAGCCA+GGG - chr7_3:79072422-79072441 Msa1127430:CDS 40.0%
GGCAATTTCTCAGAATCAGA+AGG + chr7_3:79072531-79072550 None:intergenic 40.0%
TGCTTCAATTTCATCCACAG+TGG + chr7_3:79072622-79072641 None:intergenic 40.0%
TTGATCCTTATCACCATGCA+GGG + chr7_3:79072676-79072695 None:intergenic 40.0%
ATTGATCCTTATCACCATGC+AGG + chr7_3:79072677-79072696 None:intergenic 40.0%
AGTAGCAATAAGCACATGGT+AGG + chr7_3:79072739-79072758 None:intergenic 40.0%
CATCAGTAGCAATAAGCACA+TGG + chr7_3:79072743-79072762 None:intergenic 40.0%
GTTAATAGCTTAGTTGCTGC+TGG - chr7_3:79072936-79072955 Msa1127430:CDS 40.0%
! GTTGATGGATCTTGCTATGA+AGG - chr7_3:79072977-79072996 Msa1127430:CDS 40.0%
! TATCCCCCTATGCTATTTAC+AGG - chr7_3:79073142-79073161 Msa1127430:CDS 40.0%
TTGCCTGTAAATAGCATAGG+GGG + chr7_3:79073148-79073167 None:intergenic 40.0%
ATTTAGTCGTTCAGGAAGAC+AGG + chr7_3:79073383-79073402 None:intergenic 40.0%
TGTCTTCCTGAACGACTAAA+TGG - chr7_3:79073382-79073401 Msa1127430:CDS 40.0%
GTCTTCCTGAACGACTAAAT+GGG - chr7_3:79073383-79073402 Msa1127430:CDS 40.0%
CGTGCTTACAGGAAATTGTT+TGG - chr7_3:79073541-79073560 Msa1127430:CDS 40.0%
ACAGCTCGATTAAAACCAGA+GGG + chr7_3:79073618-79073637 None:intergenic 40.0%
AACAGCTCGATTAAAACCAG+AGG + chr7_3:79073619-79073638 None:intergenic 40.0%
! CTGACGATGTTTTATGATGC+TGG - chr7_3:79073886-79073905 Msa1127430:intron 40.0%
AAACGAGATGCAAGAAAAGG+AGG - chr7_3:79073994-79074013 Msa1127430:intron 40.0%
CATTTCTTGTGTTGTGTAGG+TGG - chr7_3:79074165-79074184 Msa1127430:CDS 40.0%
CAGGAATGATGTCCCAATTT+AGG - chr7_3:79074337-79074356 Msa1127430:CDS 40.0%
CAACGAAGCTACTCCTAAAT+TGG + chr7_3:79074353-79074372 None:intergenic 40.0%
TCATCAACCTCCCAAAATGA+AGG - chr7_3:79074378-79074397 Msa1127430:CDS 40.0%
! ACTGAATCCTTCATTTTGGG+AGG + chr7_3:79074388-79074407 None:intergenic 40.0%
AATAAGAGACCAACACTAGC+TGG - chr7_3:79074429-79074448 Msa1127430:CDS 40.0%
GAATTTACAGTTGAAGGAGC+AGG + chr7_3:79074519-79074538 None:intergenic 40.0%
!! GCAGTTCTAAACCTAGAGAA+AGG - chr7_3:79074675-79074694 Msa1127430:CDS 40.0%
AACTATCTATCCCAACCTGA+TGG + chr7_3:79074707-79074726 None:intergenic 40.0%
GTATAGATATTCCAGAGCCA+AGG - chr7_3:79074895-79074914 Msa1127430:five_prime_UTR 40.0%
GAGAGAAAATGTTTGAGCCT+TGG + chr7_3:79074915-79074934 None:intergenic 40.0%
ATGAAGGTGAAGGCGAGTAT+AGG + chr7_3:79070423-79070442 None:intergenic 45.0%
! TTTGGAGCTATGGGTAGTAG+TGG + chr7_3:79070511-79070530 None:intergenic 45.0%
ATCGTGTGCAAGCTCAAGTT+AGG - chr7_3:79070600-79070619 Msa1127430:three_prime_UTR 45.0%
TCGTGTGCAAGCTCAAGTTA+GGG - chr7_3:79070601-79070620 Msa1127430:three_prime_UTR 45.0%
! TGGCTTTTACGAGATGAAGG+AGG + chr7_3:79070775-79070794 None:intergenic 45.0%
! TCGTGGCTTTTACGAGATGA+AGG + chr7_3:79070778-79070797 None:intergenic 45.0%
CGTTGTCTTCGAAATTGTCG+TGG + chr7_3:79070795-79070814 None:intergenic 45.0%
GCCCTCAAAAAACTCTCCAT+TGG + chr7_3:79071033-79071052 None:intergenic 45.0%
!!! GAGTTTTTTGAGGGCGAAGA+AGG - chr7_3:79071038-79071057 Msa1127430:CDS 45.0%
TTGAGGGCGAAGAAGGATTT+AGG - chr7_3:79071045-79071064 Msa1127430:CDS 45.0%
TGAGGGCGAAGAAGGATTTA+GGG - chr7_3:79071046-79071065 Msa1127430:CDS 45.0%
! GAAGGATTTAGGGTTGACGT+TGG - chr7_3:79071056-79071075 Msa1127430:CDS 45.0%
GAGGAGTCACCTTCAATATC+AGG - chr7_3:79071270-79071289 Msa1127430:intron 45.0%
GTTGAGTGCGATTGAACGTT+TGG - chr7_3:79071718-79071737 Msa1127430:intron 45.0%
AGTTTGGCTATTCGGGTATC+AGG - chr7_3:79071805-79071824 Msa1127430:intron 45.0%
GTTTGGCTATTCGGGTATCA+GGG - chr7_3:79071806-79071825 Msa1127430:intron 45.0%
GCTTGGCATTGTATAGACGT+CGG + chr7_3:79071922-79071941 None:intergenic 45.0%
AAAGCACAACCGGTAAAGCT+TGG + chr7_3:79071939-79071958 None:intergenic 45.0%
! TCTCTACCAGAAAGCACAAC+CGG + chr7_3:79071949-79071968 None:intergenic 45.0%
GGTGCACATATCACTCCTAT+AGG + chr7_3:79072075-79072094 None:intergenic 45.0%
ATGTGCACCTACCAGAGAAT+TGG - chr7_3:79072086-79072105 Msa1127430:intron 45.0%
TGATGTGCCAATTCTCTGGT+AGG + chr7_3:79072096-79072115 None:intergenic 45.0%
GGCACATCAGATATATCTCG+AGG - chr7_3:79072107-79072126 Msa1127430:intron 45.0%
ATACGTGTCTCTGCTGTCTA+TGG - chr7_3:79072156-79072175 Msa1127430:intron 45.0%
CAGTTCAAAGAACTCAAGGC+AGG - chr7_3:79072198-79072217 Msa1127430:intron 45.0%
! CATGCTAAAAATGAAGGCGC+TGG - chr7_3:79072260-79072279 Msa1127430:intron 45.0%
AATGCTCAGAGCAACTTACC+TGG - chr7_3:79072284-79072303 Msa1127430:intron 45.0%
AACTTACCTGGTGCTTGATG+AGG - chr7_3:79072296-79072315 Msa1127430:intron 45.0%
TTGGATTTGAGCCGCAAGTA+AGG - chr7_3:79072337-79072356 Msa1127430:intron 45.0%
CAGAAAAGAGCAAGGTTTGG+CGG + chr7_3:79072389-79072408 None:intergenic 45.0%
! GCTAACTTTTCGACTTTGCG+AGG + chr7_3:79072420-79072439 None:intergenic 45.0%
GCAAAGTCGAAAAGTTAGCC+AGG - chr7_3:79072421-79072440 Msa1127430:CDS 45.0%
TCACTCTGATAGGATCGGAA+AGG + chr7_3:79072452-79072471 None:intergenic 45.0%
CACTGTCACTCTGATAGGAT+CGG + chr7_3:79072457-79072476 None:intergenic 45.0%
GATCCTATCAGAGTGACAGT+GGG - chr7_3:79072456-79072475 Msa1127430:CDS 45.0%
! CTGATTCTGAGAAATTGCCG+TGG - chr7_3:79072532-79072551 Msa1127430:CDS 45.0%
GGTAATTTCTCCAGAAGCCA+CGG + chr7_3:79072552-79072571 None:intergenic 45.0%
! TTCATCCACAGTGGCCTTTT+TGG + chr7_3:79072613-79072632 None:intergenic 45.0%
! TTTAAAGTTGCTGCCCTGCA+TGG - chr7_3:79072660-79072679 Msa1127430:CDS 45.0%
GACATGCATGTTCATCGCAT+TGG - chr7_3:79072831-79072850 Msa1127430:CDS 45.0%
GTTCATCGCATTGGAAGAAC+AGG - chr7_3:79072840-79072859 Msa1127430:CDS 45.0%
! CAAAAAGAAGCACGGTTTGC+TGG - chr7_3:79072906-79072925 Msa1127430:CDS 45.0%
ATTAAAACCAGAGGGGAGAC+AGG + chr7_3:79073610-79073629 None:intergenic 45.0%
CAGCTCGATTAAAACCAGAG+GGG + chr7_3:79073617-79073636 None:intergenic 45.0%
!! AGCTGTTGACTCTGTCATTC+TGG - chr7_3:79073632-79073651 Msa1127430:intron 45.0%
TGTCTTCTAATTCCGCAGGA+CGG - chr7_3:79073958-79073977 Msa1127430:intron 45.0%
GAGATGCAAGAAAAGGAGGT+AGG - chr7_3:79073998-79074017 Msa1127430:intron 45.0%
GAGATAAGGACGCAGCTTAT+TGG + chr7_3:79074092-79074111 None:intergenic 45.0%
GACTCTACTGTGCAGAGATA+AGG + chr7_3:79074106-79074125 None:intergenic 45.0%
TGTTGTGTAGGTGGGAGAAA+AGG - chr7_3:79074174-79074193 Msa1127430:CDS 45.0%
GCTGTAAATTCTCTGCGAAC+AGG - chr7_3:79074318-79074337 Msa1127430:CDS 45.0%
GATACAAAGCCAGCTAGTGT+TGG + chr7_3:79074441-79074460 None:intergenic 45.0%
!! ACACTAGCTGGCTTTGTATC+TGG - chr7_3:79074441-79074460 Msa1127430:CDS 45.0%
! GTATCTGGTGGATCAATTGG+CGG - chr7_3:79074456-79074475 Msa1127430:CDS 45.0%
CTAAACCTAGAGAAAGGCGA+AGG - chr7_3:79074681-79074700 Msa1127430:exon 45.0%
CATACACTCGAGTTTGACAG+CGG + chr7_3:79074748-79074767 None:intergenic 45.0%
AAATGTTTGAGCCTTGGCTC+TGG + chr7_3:79074909-79074928 None:intergenic 45.0%
GTCGTACTCATGATAGAGGT+AGG + chr7_3:79074940-79074959 None:intergenic 45.0%
ACCAGAAACTCGACCATACG+CGG - chr7_3:79070454-79070473 Msa1127430:three_prime_UTR 50.0%
GGAACGTAAAGACGTTGAGG+AGG + chr7_3:79070754-79070773 None:intergenic 50.0%
GGAGGAACGTAAAGACGTTG+AGG + chr7_3:79070757-79070776 None:intergenic 50.0%
! AACAACGATGATAACGCCGG+TGG - chr7_3:79070871-79070890 Msa1127430:CDS 50.0%
TCCACTTTCTCCTTCGGCTT+CGG + chr7_3:79070979-79070998 None:intergenic 50.0%
! TTTAGGGTTGACGTTGGCGT+CGG - chr7_3:79071062-79071081 Msa1127430:CDS 50.0%
TTATGCTGCTGCTAAAGCCG+TGG - chr7_3:79071122-79071141 Msa1127430:CDS 50.0%
CGCACACTTGTGAACCGTTA+GGG + chr7_3:79071642-79071661 None:intergenic 50.0%
TCACAAGTGTGCGCTTGTGT+CGG - chr7_3:79071649-79071668 Msa1127430:intron 50.0%
! GCTTTACCGGTTGTGCTTTC+TGG - chr7_3:79071940-79071959 Msa1127430:intron 50.0%
! GGCATAGCGAAAACTGGTTC+TGG - chr7_3:79071976-79071995 Msa1127430:intron 50.0%
GGATCAGCCTGAACTTCAGA+AGG - chr7_3:79072041-79072060 Msa1127430:intron 50.0%
TCAGCCTGAACTTCAGAAGG+AGG - chr7_3:79072044-79072063 Msa1127430:intron 50.0%
!! CCTTCCTCCTTCTGAAGTTC+AGG + chr7_3:79072051-79072070 None:intergenic 50.0%
CCTGAACTTCAGAAGGAGGA+AGG - chr7_3:79072048-79072067 Msa1127430:intron 50.0%
CAGAAGGAGGAAGGTCCTAT+AGG - chr7_3:79072057-79072076 Msa1127430:intron 50.0%
GAGATAGTTGTTGCTACGCC+TGG - chr7_3:79072225-79072244 Msa1127430:intron 50.0%
CCAACGATGGACCTTACTTG+CGG + chr7_3:79072351-79072370 None:intergenic 50.0%
GGTCCATCGTTGGTCAGATT+AGG - chr7_3:79072358-79072377 Msa1127430:intron 50.0%
CATCGTTGGTCAGATTAGGC+CGG - chr7_3:79072362-79072381 Msa1127430:intron 50.0%
AGGATCGGAAAGGATTTCCC+TGG + chr7_3:79072442-79072461 None:intergenic 50.0%
CGATCCTATCAGAGTGACAG+TGG - chr7_3:79072455-79072474 Msa1127430:CDS 50.0%
TCTCCCACTGTCACTCTGAT+AGG + chr7_3:79072462-79072481 None:intergenic 50.0%
TATCAGAGTGACAGTGGGAG+AGG - chr7_3:79072461-79072480 Msa1127430:CDS 50.0%
TGAGAAATTGCCGTGGCTTC+TGG - chr7_3:79072539-79072558 Msa1127430:CDS 50.0%
TGCTTCCAAAAAGGCCACTG+TGG - chr7_3:79072605-79072624 Msa1127430:CDS 50.0%
GAAGCACAATTGGGTCAGAG+AGG - chr7_3:79072636-79072655 Msa1127430:CDS 50.0%
CTTGATGTCAAGACCACGAG+CGG + chr7_3:79072769-79072788 None:intergenic 50.0%
!! AGCACGGTTTGCTGGTGAAT+TGG - chr7_3:79072914-79072933 Msa1127430:CDS 50.0%
TGCTGGTCAGAATGTGTCCA+CGG - chr7_3:79072953-79072972 Msa1127430:CDS 50.0%
GAATGTGTCCACGGAGTTGA+TGG - chr7_3:79072962-79072981 Msa1127430:CDS 50.0%
AGCAAGATCCATCAACTCCG+TGG + chr7_3:79072973-79072992 None:intergenic 50.0%
CTGCTTGGTTTCGTGCTTAC+AGG - chr7_3:79073530-79073549 Msa1127430:CDS 50.0%
AATAAGTCCTGTCTCCCCTC+TGG - chr7_3:79073600-79073619 Msa1127430:intron 50.0%
GTCTTCTAATTCCGCAGGAC+GGG - chr7_3:79073959-79073978 Msa1127430:intron 50.0%
GTAGGTGGGAGAAAAGGCAA+AGG - chr7_3:79074180-79074199 Msa1127430:CDS 50.0%
AGAAAAGGCAAAGGCAGAGG+TGG - chr7_3:79074189-79074208 Msa1127430:CDS 50.0%
GAAAAGGCAAAGGCAGAGGT+GGG - chr7_3:79074190-79074209 Msa1127430:CDS 50.0%
AAAAGGCAAAGGCAGAGGTG+GGG - chr7_3:79074191-79074210 Msa1127430:CDS 50.0%
!!! GTGGATTTTGGCTTGGGCAT+TGG - chr7_3:79074240-79074259 Msa1127430:CDS 50.0%
GCATCATCTAACGCAGTTCC+AGG - chr7_3:79074285-79074304 Msa1127430:CDS 50.0%
CATCTAACGCAGTTCCAGGT+CGG - chr7_3:79074289-79074308 Msa1127430:CDS 50.0%
!! CTAGCTGGCTTTGTATCTGG+TGG - chr7_3:79074444-79074463 Msa1127430:CDS 50.0%
! CTGTTCGTGTTGTTCTGACC+AGG + chr7_3:79074567-79074586 None:intergenic 50.0%
CTGGTCAGAACAACACGAAC+AGG - chr7_3:79074565-79074584 Msa1127430:CDS 50.0%
ACCGCGTATGGTCGAGTTTC+TGG + chr7_3:79070458-79070477 None:intergenic 55.0%
AGAAACTCGACCATACGCGG+TGG - chr7_3:79070457-79070476 Msa1127430:three_prime_UTR 55.0%
GAAACTCGACCATACGCGGT+GGG - chr7_3:79070458-79070477 Msa1127430:three_prime_UTR 55.0%
! GTTGTTGTTCCCACCGCGTA+TGG + chr7_3:79070470-79070489 None:intergenic 55.0%
! AACGATGATAACGCCGGTGG+TGG - chr7_3:79070874-79070893 Msa1127430:CDS 55.0%
CTCTTCACAACCACCACCAC+CGG + chr7_3:79070890-79070909 None:intergenic 55.0%
ACTTTCTCCTTCGGCTTCGG+TGG + chr7_3:79070976-79070995 None:intergenic 55.0%
ACCGAAGCCGAAGGAGAAAG+TGG - chr7_3:79070975-79070994 Msa1127430:CDS 55.0%
GCGCACACTTGTGAACCGTT+AGG + chr7_3:79071643-79071662 None:intergenic 55.0%
CGTGTCTCTGCTGTCTATGG+TGG - chr7_3:79072159-79072178 Msa1127430:intron 55.0%
GATCAGCCTCATCAAGCACC+AGG + chr7_3:79072305-79072324 None:intergenic 55.0%
CCGCAAGTAAGGTCCATCGT+TGG - chr7_3:79072348-79072367 Msa1127430:intron 55.0%
CGGCCTAATCTGACCAACGA+TGG + chr7_3:79072364-79072383 None:intergenic 55.0%
AAGAGCAAGGTTTGGCGGTC+CGG + chr7_3:79072384-79072403 None:intergenic 55.0%
AGAGTGACAGTGGGAGAGGT+GGG - chr7_3:79072465-79072484 Msa1127430:CDS 55.0%
TGCTGCCCTGCATGGTGATA+AGG - chr7_3:79072668-79072687 Msa1127430:CDS 55.0%
ATTGGAAGAACAGGCCGTGC+TGG - chr7_3:79072849-79072868 Msa1127430:CDS 55.0%
CACGGCCCATTTAGTCGTTC+AGG + chr7_3:79073391-79073410 None:intergenic 55.0%
GGGAGAAAAGGCAAAGGCAG+AGG - chr7_3:79074186-79074205 Msa1127430:CDS 55.0%
AAAGGCAAAGGCAGAGGTGG+GGG - chr7_3:79074192-79074211 Msa1127430:CDS 55.0%
!!! CGCGGAGTGGATTTTGGCTT+GGG - chr7_3:79074234-79074253 Msa1127430:CDS 55.0%
TTTACAGCAGCAGACCGACC+TGG + chr7_3:79074306-79074325 None:intergenic 55.0%
GATGGCCTTCGCCTTTCTCT+AGG + chr7_3:79074689-79074708 None:intergenic 55.0%
AGAGAAAGGCGAAGGCCATC+AGG - chr7_3:79074689-79074708 Msa1127430:exon 55.0%
AAAGGCGAAGGCCATCAGGT+TGG - chr7_3:79074693-79074712 Msa1127430:exon 55.0%
AAGGCGAAGGCCATCAGGTT+GGG - chr7_3:79074694-79074713 Msa1127430:exon 55.0%
! GATGATAACGCCGGTGGTGG+TGG - chr7_3:79070877-79070896 Msa1127430:CDS 60.0%
!! CGGTGGTGGTGGTTGTGAAG+AGG - chr7_3:79070888-79070907 Msa1127430:CDS 60.0%
TTCTCCTTCGGCTTCGGTGG+CGG + chr7_3:79070973-79070992 None:intergenic 60.0%
GCTGCTAAAGCCGTGGATGC+TGG - chr7_3:79071129-79071148 Msa1127430:CDS 60.0%
CAGAGTGACAGTGGGAGAGG+TGG - chr7_3:79072464-79072483 Msa1127430:CDS 60.0%
GAGTGACAGTGGGAGAGGTG+GGG - chr7_3:79072466-79072485 Msa1127430:CDS 60.0%
GCTACTGATGTTGCCGCTCG+TGG - chr7_3:79072753-79072772 Msa1127430:CDS 60.0%
! AACAGGCCGTGCTGGTGACA+AGG - chr7_3:79072857-79072876 Msa1127430:CDS 60.0%
CTCCGTCCTTGTCACCAGCA+CGG + chr7_3:79072866-79072885 None:intergenic 60.0%
TTCCGCAGGACGGGAGATTC+AGG - chr7_3:79073968-79073987 Msa1127430:intron 60.0%
GACCTGAATCTCCCGTCCTG+CGG + chr7_3:79073973-79073992 None:intergenic 60.0%
!! GGTGTGCGCGGAGTGGATTT+TGG - chr7_3:79074228-79074247 Msa1127430:CDS 60.0%
!!! GCGCGGAGTGGATTTTGGCT+TGG - chr7_3:79074233-79074252 Msa1127430:CDS 60.0%
GCGTCGGATGCGTTGCATGC+TGG - chr7_3:79071078-79071097 Msa1127430:CDS 65.0%
GACAGTGGGAGAGGTGGGGA+TGG - chr7_3:79072470-79072489 Msa1127430:CDS 65.0%
! GGCCGTGCTGGTGACAAGGA+CGG - chr7_3:79072861-79072880 Msa1127430:CDS 65.0%
! AAAGGCAGAGGTGGGGGTGC+AGG - chr7_3:79074198-79074217 Msa1127430:CDS 65.0%
! GCAGGTGGCAAAGGTGTGCG+CGG - chr7_3:79074216-79074235 Msa1127430:CDS 65.0%
! TGGCAAAGGTGTGCGCGGAG+TGG - chr7_3:79074221-79074240 Msa1127430:CDS 65.0%
! GGTGGGGGTGCAGGTGGCAA+AGG - chr7_3:79074207-79074226 Msa1127430:CDS 70.0%
! GGCAGAGGTGGGGGTGCAGG+TGG - chr7_3:79074201-79074220 Msa1127430:CDS 75.0%
! GGCGCCGCCACCGAAGCCGA+AGG - chr7_3:79070966-79070985 Msa1127430:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 79070413 79074960 79070413 ID=Msa1127430;Name=Msa1127430
chr7_3 mRNA 79070413 79074960 79070413 ID=Msa1127430-mRNA-1;Parent=Msa1127430;Name=Msa1127430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=263|1|1|1|1|1|5|236|777
chr7_3 exon 79070413 79070694 79070413 ID=Msa1127430-mRNA-1:exon:22246;Parent=Msa1127430-mRNA-1
chr7_3 exon 79070787 79071189 79070787 ID=Msa1127430-mRNA-1:exon:22245;Parent=Msa1127430-mRNA-1
chr7_3 exon 79071358 79071397 79071358 ID=Msa1127430-mRNA-1:exon:22244;Parent=Msa1127430-mRNA-1
chr7_3 exon 79072375 79073603 79072375 ID=Msa1127430-mRNA-1:exon:22243;Parent=Msa1127430-mRNA-1
chr7_3 exon 79074082 79074960 79074082 ID=Msa1127430-mRNA-1:exon:22242;Parent=Msa1127430-mRNA-1
chr7_3 five_prime_UTR 79074698 79074960 79074698 ID=Msa1127430-mRNA-1:five_prime_utr;Parent=Msa1127430-mRNA-1
chr7_3 CDS 79074082 79074697 79074082 ID=Msa1127430-mRNA-1:cds;Parent=Msa1127430-mRNA-1
chr7_3 CDS 79072375 79073603 79072375 ID=Msa1127430-mRNA-1:cds;Parent=Msa1127430-mRNA-1
chr7_3 CDS 79071358 79071397 79071358 ID=Msa1127430-mRNA-1:cds;Parent=Msa1127430-mRNA-1
chr7_3 CDS 79070787 79071189 79070787 ID=Msa1127430-mRNA-1:cds;Parent=Msa1127430-mRNA-1
chr7_3 CDS 79070649 79070694 79070649 ID=Msa1127430-mRNA-1:cds;Parent=Msa1127430-mRNA-1
chr7_3 three_prime_UTR 79070413 79070648 79070413 ID=Msa1127430-mRNA-1:three_prime_utr;Parent=Msa1127430-mRNA-1
Gene Sequence

>Msa1127430

ATGTCGAAGAGAAAGTTCGGATTCGAAGGTTTCGGCATAAACCGTCAATCTACCTATAGTTTCGAACGATCTCAACCTCCTCAACGTCTTTACGTTCCTCCTTCATCTCGTAAAAGCCACGACAATTTCGAAGACAACGACCTTGATAACATCGAGTACGATGATGATTCCAGAGAAGAACAATCAAACAACAACAACAACGATGATAACGCCGGTGGTGGTGGTTGTGAAGAGGCTGAAATCGATCCATTAGATGCATTCATGGAAGGAATACACGAGGAGATGAAATCGGCGCCGCCACCGAAGCCGAAGGAGAAAGTGGAAGATAGATATAAAGATGATTTAGAGGATGATCCAATGGAGAGTTTTTTGAGGGCGAAGAAGGATTTAGGGTTGACGTTGGCGTCGGATGCGTTGCATGCTGGATATGATTCTGATGAGGAGGTTTATGCTGCTGCTAAAGCCGTGGATGCTGGTTTGATTGATTATGATTCTGATGATAATCCTATTGTTCTTGACAAGAAGAAAATCGAACCTATTGCTCCTCTTGATCATACTGAGATTGATTATCAGCCTTTTAACAAGGATTTTTATGAGGAGTCACCTTCAATATCAGGTATGAGTGAGCAAGATGTAACTGATTATAGGAAGAGTTTGGCTATTCGGGTATCAGGGTTTGAAGTTCCTAAGCCAGTAAAAACATTTGAGGACTGTGGGTTTGCTCCACAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCGACGTCTATACAATGCCAAGCTTTACCGGTTGTGCTTTCTGGTAGAGATATCATTGGCATAGCGAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATCGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAGGAAGGTCCTATAGGAGTGATATGTGCACCTACCAGAGAATTGGCACATCAGATATATCTCGAGGCCAAGAAATTTGCTAAAGCATATGGAATACGTGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGCTGTGAGATAGTTGTTGCTACGCCTGGAAGATTGATAGACATGCTAAAAATGAAGGCGCTGGCAATGCTCAGAGCAACTTACCTGGTGCTTGATGAGGCTGATCGAATGTTTGATCTTGGATTTGAGCCGCAAGTAAGGTCCATCGTTGGTCAGATTAGGCCGGACCGCCAAACCTTGCTCTTTTCTGCAACAATGCCTCGCAAAGTCGAAAAGTTAGCCAGGGAAATCCTTTCCGATCCTATCAGAGTGACAGTGGGAGAGGTGGGGATGGCAAATGAAGATATTACTCAAGTTGTTCAAGTAATTCCTTCTGATTCTGAGAAATTGCCGTGGCTTCTGGAGAAATTACCCGAAATGATTGATCAAGGTGATACATTAGTTTTTGCTTCCAAAAAGGCCACTGTGGATGAAATTGAAGCACAATTGGGTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAGGATCAATCTTCTCGTATGGATATTTTACAGAAATTTAAATCTGGCACCTACCATGTGCTTATTGCTACTGATGTTGCCGCTCGTGGTCTTGACATCAAGTCAATTAAAACCGTGGTAAACTTTGATATTGCTAAAGATATGGACATGCATGTTCATCGCATTGGAAGAACAGGCCGTGCTGGTGACAAGGACGGAGTTGCATACACTCTTATAACTCAAAAAGAAGCACGGTTTGCTGGTGAATTGGTTAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCCACGGAGTTGATGGATCTTGCTATGAAGGACGGGAGATTCAGGTCAAAACGAGATGCAAGAAAAGGAGGTGGGAGAAAAGGCAAAGGCAGAGGTGGGGGTGCAGGTGGCAAAGGTGTGCGCGGAGTGGATTTTGGCTTGGGCATTGGATATAGTACAGAGTCAAACAATGCATCATCTAACGCAGTTCCAGGTCGGTCTGCTGCTGTAAATTCTCTGCGAACAGGAATGATGTCCCAATTTAGGAGTAGCTTCGTTGCTGCATCATCAACCTCCCAAAATGAAGGATTCAGTAATAATACAAGCATGGCTGTTAATAAGAGACCAACACTAGCTGGCTTTGTATCTGGTGGATCAATTGGCGGCGATATAAATACTCATCAGCAAACTGCTTCATACAATCCTGCTCCTTCAACTGTAAATTCCACTAGTCAAAATTCTGGAGTAAATCCTGGTCAGAACAACACGAACAGTTCTAAACCTAGAGAAAGGCGAAGGCCATCAGGTTGGGATAGATAG

Protein sequence

>Msa1127430

MSKRKFGFEGFGINRQSTYSFERSQPPQRLYVPPSSRKSHDNFEDNDLDNIEYDDDSREEQSNNNNNDDNAGGGGCEEAEIDPLDAFMEGIHEEMKSAPPPKPKEKVEDRYKDDLEDDPMESFLRAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGLIDYDSDDNPIVLDKKKIEPIAPLDHTEIDYQPFNKDFYEESPSISGMSEQDVTDYRKSLAIRVSGFEVPKPVKTFEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIEAQLGQRGFKVAALHGDKDQSSRMDILQKFKSGTYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLVAAGQNVSTELMDLAMKDGRFRSKRDARKGGGRKGKGRGGGAGGKGVRGVDFGLGIGYSTESNNASSNAVPGRSAAVNSLRTGMMSQFRSSFVAASSTSQNEGFSNNTSMAVNKRPTLAGFVSGGSIGGDINTHQQTASYNPAPSTVNSTSQNSGVNPGQNNTNSSKPRERRRPSGWDR*