AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1163870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1163870 MtrunA17_Chr7g0261291 99.812 533 1 0 1 533 1 533 0.0 1104
Msa1163870 MtrunA17_Chr1g0193681 68.798 391 67 5 5 392 11 349 1.98e-168 480
Msa1163870 MtrunA17_Chr1g0187741 65.789 76 26 0 110 185 1 76 5.05e-28 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1163870 AT1G65660.1 82.584 534 91 1 1 532 1 534 0.0 913
Msa1163870 AT4G37120.1 78.652 534 112 1 1 532 1 534 0.0 874
Msa1163870 AT3G45950.1 71.781 365 93 3 1 364 1 356 0.0 536

Find 172 sgRNAs with CRISPR-Local

Find 502 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTATTGATTGTTCTATTTC+TGG 0.093414 7_4:-55276590 Msa1163870:three_prime_UTR
CGAAGAATCACACTCCAATT+TGG 0.190205 7_4:+55284324 None:intergenic
CTGAAGATGAAGATGATTTA+AGG 0.203780 7_4:-55279353 Msa1163870:CDS
ATGCACCTTTCCTATACTTC+TGG 0.255412 7_4:+55280498 None:intergenic
CTTGACCACTACTTCTATAT+TGG 0.255478 7_4:+55278857 None:intergenic
TTGCAGCACCCTCATCATTT+TGG 0.262971 7_4:+55279385 None:intergenic
ATGACATATACTGAGGAATA+TGG 0.265173 7_4:+55283798 None:intergenic
TTCACGCATGGACCTGGTCT+TGG 0.298183 7_4:+55279038 None:intergenic
CACAAAATGGCAACAGCTTC+AGG 0.301623 7_4:-55284258 Msa1163870:intron
TCATCCAGAACTACGTCTTC+TGG 0.306664 7_4:+55277566 None:intergenic
TCACGCATGGACCTGGTCTT+GGG 0.314163 7_4:+55279039 None:intergenic
CAACAACCACACAACTGTTT+GGG 0.317766 7_4:-55277954 Msa1163870:CDS
ACTTCCAAGAGAACTTCTTC+TGG 0.324372 7_4:-55278644 Msa1163870:CDS
GCTTGCCGATGCACTCAAAA+AGG 0.330113 7_4:-55277537 Msa1163870:intron
ATCCTCTTCATACTTGCTTC+TGG 0.330708 7_4:+55277985 None:intergenic
GGCCTCTCCAAGCTTAGTTC+AGG 0.350587 7_4:+55276926 None:intergenic
CTATGTCTTTGAGAAACCTT+AGG 0.353465 7_4:-55276659 Msa1163870:three_prime_UTR
TTCTGCGTTTGATCACAAAA+TGG 0.357801 7_4:-55284271 Msa1163870:exon
TCAACAACCACACAACTGTT+TGG 0.359011 7_4:-55277955 Msa1163870:CDS
GAAGAATCACACTCCAATTT+GGG 0.359624 7_4:+55284325 None:intergenic
ACAGGTAACTCAAGAGGATA+TGG 0.365679 7_4:-55277000 Msa1163870:intron
TAAGCTTGGAGAGGCCAAAA+AGG 0.370857 7_4:-55276919 Msa1163870:three_prime_UTR
TGCACCTTTCCTATACTTCT+GGG 0.379997 7_4:+55280499 None:intergenic
TCCTCTTCATACTTGCTTCT+GGG 0.380155 7_4:+55277986 None:intergenic
AGAATTGCCATGAACAACTA+TGG 0.385975 7_4:+55276255 None:intergenic
GACACTATTATTGAGAAGTA+TGG 0.392536 7_4:-55278688 Msa1163870:CDS
TTTGTGTTTGTTACAATTGA+GGG 0.395569 7_4:+55276336 None:intergenic
AGTTACCTAAAATCCCAAAT+TGG 0.396186 7_4:-55284338 Msa1163870:five_prime_UTR
GAGAAGCGTGTGCGAACAAC+AGG 0.403536 7_4:-55279279 Msa1163870:CDS
GTTTGAAACATCAAAGGAAA+TGG 0.413225 7_4:-55280580 Msa1163870:CDS
TGGTCAAGCTTTGGAATTCA+AGG 0.415510 7_4:-55278842 Msa1163870:CDS
TAGAAGTAGTGGTCAAGCTT+TGG 0.419742 7_4:-55278851 Msa1163870:CDS
TCGTGCTGGTAGAATTGTTA+AGG 0.421506 7_4:-55278593 Msa1163870:CDS
TCCCTTGTCAAATGCTTCCC+AGG 0.423430 7_4:+55278804 None:intergenic
AAAGAAGCCATAGTTGTTCA+TGG 0.429918 7_4:-55276262 Msa1163870:three_prime_UTR
TGAAGATGAAGATGATTTAA+GGG 0.430484 7_4:-55279352 Msa1163870:CDS
CTACTAGCATATACTTGAAC+TGG 0.431267 7_4:+55276617 None:intergenic
ATTACTCTATAAGAATTTCA+AGG 0.432870 7_4:-55278743 Msa1163870:CDS
ATTTGTGTTTGTTACAATTG+AGG 0.436797 7_4:+55276335 None:intergenic
TGTTCCAGAAGACGTAGTTC+TGG 0.437289 7_4:-55277570 Msa1163870:CDS
ACGGCGAGGTTTAAATGAAC+TGG 0.437833 7_4:+55276379 None:intergenic
CTCAAGCTGCCAAGAGGAAT+GGG 0.438846 7_4:-55276853 Msa1163870:three_prime_UTR
TGACATATACTGAGGAATAT+GGG 0.442110 7_4:+55283799 None:intergenic
CTTATAGAGTAATTCAGCTT+GGG 0.445002 7_4:+55278753 None:intergenic
AGCTTGACTATGATGGCAAA+CGG 0.446023 7_4:-55279530 Msa1163870:CDS
CTTCCAAGAGAACTTCTTCT+GGG 0.446100 7_4:-55278643 Msa1163870:CDS
CGCTCGAAAGAAGTTCTTGA+AGG 0.450188 7_4:-55279439 Msa1163870:CDS
AACCTCAGCAGGTGCAAGTC+CGG 0.450714 7_4:+55283847 None:intergenic
TTTGGATCTGCCTCTGGAAG+AGG 0.454768 7_4:+55279012 None:intergenic
GGAACAACAGCTGAAGAGAC+TGG 0.455944 7_4:-55279418 Msa1163870:CDS
TGACCCAGAAGAAGTTCTCT+TGG 0.456809 7_4:+55278640 None:intergenic
CTTCTTTCGAGCGTCGTCTC+GGG 0.457445 7_4:+55279449 None:intergenic
AGCTATTGCACTGGTGCTGC+TGG 0.461250 7_4:-55277872 Msa1163870:CDS
CACTGGTGCTGCTGGTATTG+AGG 0.461483 7_4:-55277864 Msa1163870:CDS
TGGTCTTTCCATGCATGCCT+TGG 0.468273 7_4:+55279617 None:intergenic
GCACATTGCTGCTGATGAAA+AGG 0.477662 7_4:-55279565 Msa1163870:CDS
ACTTCTTTCGAGCGTCGTCT+CGG 0.480273 7_4:+55279448 None:intergenic
CTAAACCAATAGAAGAGAAA+AGG 0.482314 7_4:-55277613 Msa1163870:CDS
GAAATTGAAGTCTCAAACAA+AGG 0.483456 7_4:-55278710 Msa1163870:CDS
CATTTGCCTTAGTGACCCTA+AGG 0.483590 7_4:+55276643 None:intergenic
AGAGAAAAGGCCTGCTACAT+GGG 0.485089 7_4:-55277600 Msa1163870:CDS
CCATCTTCATCAACCTCAGC+AGG 0.485535 7_4:+55283836 None:intergenic
ATTGAGGCTGCTGAGGCTGC+AGG 0.490119 7_4:-55277848 Msa1163870:CDS
TGCTTTGCTCCTACTTTCCG+TGG 0.491979 7_4:+55279597 None:intergenic
AGGACTTAAACATCCATGCC+TGG 0.493322 7_4:-55278822 Msa1163870:CDS
ACACAACTGTTTGGGGCTCA+TGG 0.494810 7_4:-55277946 Msa1163870:CDS
TTGCAGTGGCATTCAAGTCC+AGG 0.496260 7_4:-55283913 Msa1163870:intron
TCTTATAGAGTAATTCAGCT+TGG 0.499036 7_4:+55278752 None:intergenic
AATACCGTTGTGTTGATGAA+TGG 0.500800 7_4:-55276295 Msa1163870:three_prime_UTR
TACACTCTGCCCATTCCTCT+TGG 0.502379 7_4:+55276844 None:intergenic
ACATCAGTTCCCCATGTAGC+AGG 0.504075 7_4:+55277590 None:intergenic
AAGAGGATATGGAGGCATAC+AGG 0.504821 7_4:-55276989 Msa1163870:CDS
AAGAGAAAAGGCCTGCTACA+TGG 0.505586 7_4:-55277601 Msa1163870:CDS
ACAACAGGCGGTGGGAGTAC+AGG 0.505697 7_4:-55279264 Msa1163870:CDS
GCACGTAAGGAGTCTGCTGC+AGG 0.507882 7_4:-55277803 Msa1163870:intron
TACCATGATGTGGTGTAGTT+GGG 0.511009 7_4:+55280548 None:intergenic
CACAACGGTATTTGAGACAT+AGG 0.511526 7_4:+55276306 None:intergenic
GAGAAACCTTAGGGTCACTA+AGG 0.512960 7_4:-55276649 Msa1163870:three_prime_UTR
TGCTGGTATTGAGGCTGCTG+AGG 0.513900 7_4:-55277855 Msa1163870:CDS
TCTCAAGCTGCCAAGAGGAA+TGG 0.516628 7_4:-55276854 Msa1163870:three_prime_UTR
ACCACATCATGGTACGATAG+AGG 0.520950 7_4:-55280539 Msa1163870:CDS
TATGTCTTTGAGAAACCTTA+GGG 0.521014 7_4:-55276658 Msa1163870:three_prime_UTR
CTTGAGGAAGCTCGTAAAGC+CGG 0.521296 7_4:-55283866 Msa1163870:CDS
AGGATCTTCACGCATGGACC+TGG 0.521551 7_4:+55279032 None:intergenic
CGTGCTGGTAGAATTGTTAA+GGG 0.521936 7_4:-55278592 Msa1163870:CDS
TGTCAAATGCTTCCCAGGCA+TGG 0.522883 7_4:+55278809 None:intergenic
TAATGTCAGATGGAATGATC+AGG 0.524179 7_4:-55277106 Msa1163870:intron
GAGAGCTAATATTGCACGTA+AGG 0.524660 7_4:-55277816 Msa1163870:CDS
TGTTAAAGATATAACAAGAC+AGG 0.524965 7_4:-55276502 Msa1163870:three_prime_UTR
ACATAATGCCAAGGCATGCA+TGG 0.526072 7_4:-55279625 Msa1163870:CDS
TGGTAGAATTGTTAAGGGAC+AGG 0.528512 7_4:-55278587 Msa1163870:intron
CCTCTTCATACTTGCTTCTG+GGG 0.531693 7_4:+55277987 None:intergenic
TTCTTCTGGGTCAGAGTGAG+AGG 0.533851 7_4:-55278630 Msa1163870:CDS
GCTTGACTATGATGGCAAAC+GGG 0.536202 7_4:-55279529 Msa1163870:CDS
AGCGTAAATATAATGTCAGA+TGG 0.536290 7_4:-55277116 Msa1163870:CDS
GTACCATGATGTGGTGTAGT+TGG 0.538558 7_4:+55280547 None:intergenic
CACGCATGGACCTGGTCTTG+GGG 0.541517 7_4:+55279040 None:intergenic
ATGATGGCAAACGGGACAGA+TGG 0.550124 7_4:-55279521 Msa1163870:CDS
TCGAAAACAGATTGAGCTTG+AGG 0.551968 7_4:-55283882 Msa1163870:CDS
GGTTGATGAAAGCAAACAGA+TGG 0.552756 7_4:-55279316 Msa1163870:CDS
CACATTATGACCCCAAGACC+AGG 0.553071 7_4:-55279050 Msa1163870:CDS
TAAGAATTTCAAGGTCATGA+AGG 0.554860 7_4:-55278734 Msa1163870:CDS
GAGAACATCACAAAGGCTTG+TGG 0.558764 7_4:+55276873 None:intergenic
CAGCTGAAGAGACTGGAGAA+GGG 0.562989 7_4:-55279411 Msa1163870:CDS
TGCAGCATTTAAAACCCCAC+TGG 0.564956 7_4:+55277912 None:intergenic
CAAGTTGAGTATGATCGTGC+TGG 0.565861 7_4:-55278607 Msa1163870:CDS
ATGGAAAGACCACGGAAAGT+AGG 0.568977 7_4:-55279606 Msa1163870:CDS
CCTGCTGAGGTTGATGAAGA+TGG 0.573554 7_4:-55283836 Msa1163870:CDS
AGCCGGACTTGCACCTGCTG+AGG 0.576370 7_4:-55283849 Msa1163870:CDS
CGTGTGCGAACAACAGGCGG+TGG 0.578917 7_4:-55279273 Msa1163870:CDS
TGGAAGAGGATCTTCACGCA+TGG 0.581895 7_4:+55279026 None:intergenic
GATAACCAATATAGAAGTAG+TGG 0.583553 7_4:-55278862 Msa1163870:CDS
TGTAGAGTTTGAAACATCAA+AGG 0.584746 7_4:-55280586 Msa1163870:intron
GGCAAACGGGACAGATGGAA+TGG 0.586064 7_4:-55279516 Msa1163870:CDS
CCCCAGAAGCAAGTATGAAG+AGG 0.586559 7_4:-55277987 Msa1163870:CDS
GGACTTAAACATCCATGCCT+GGG 0.588939 7_4:-55278821 Msa1163870:CDS
TGTTTGGGGCTCATGGTGGA+AGG 0.589122 7_4:-55277939 Msa1163870:CDS
TTGATATTTGAACAGCCTTG+TGG 0.589335 7_4:-55276788 Msa1163870:three_prime_UTR
ATCCCAACTACACCACATCA+TGG 0.592083 7_4:-55280550 Msa1163870:CDS
TTCCTGAACTAAGCTTGGAG+AGG 0.594079 7_4:-55276928 Msa1163870:exon
TAGAGTAATTCAGCTTGGGA+AGG 0.595348 7_4:+55278757 None:intergenic
AGAGAGAAGAGAAAGATGAG+AGG 0.596130 7_4:-55277140 Msa1163870:CDS
TGTGTTTGTTACAATTGAGG+GGG 0.596183 7_4:+55276338 None:intergenic
ACCTCTATCGTACCATGATG+TGG 0.597844 7_4:+55280538 None:intergenic
TTGTGTTTGTTACAATTGAG+GGG 0.599697 7_4:+55276337 None:intergenic
ATACGTAATAGCTATTGCAC+TGG 0.600890 7_4:-55277881 Msa1163870:CDS
CAAACAGATGGACTTTGCAA+AGG 0.601027 7_4:-55279304 Msa1163870:CDS
TGCAGTGGCATTCAAGTCCA+GGG 0.602123 7_4:-55283912 Msa1163870:intron
GACATATACTGAGGAATATG+GGG 0.605217 7_4:+55283800 None:intergenic
CAAAGACATAGTAAAACGAT+CGG 0.608705 7_4:+55276671 None:intergenic
ATCCAAACAGGTAACTCAAG+AGG 0.609923 7_4:-55277006 Msa1163870:intron
GAAGGGCGACCAAAATGATG+AGG 0.610286 7_4:-55279394 Msa1163870:CDS
ATGGTGGAAGGATCACCAGT+GGG 0.611827 7_4:-55277927 Msa1163870:CDS
GTATGGCAATGCAGCTGACG+AGG 0.612655 7_4:-55278671 Msa1163870:CDS
CTCTCGGCATTAAGATACCA+AGG 0.616262 7_4:+55283770 None:intergenic
GTGTATGATTAGCGAGAAAG+CGG 0.617155 7_4:-55276826 Msa1163870:three_prime_UTR
GTGTGCGAACAACAGGCGGT+GGG 0.617858 7_4:-55279272 Msa1163870:CDS
AACAACCACACAACTGTTTG+GGG 0.618191 7_4:-55277953 Msa1163870:CDS
ACAGCTGAAGAGACTGGAGA+AGG 0.618530 7_4:-55279412 Msa1163870:CDS
CAGGCCCAGAAGTATAGGAA+AGG 0.625900 7_4:-55280503 Msa1163870:CDS
AGCTATGACACATAATGCCA+AGG 0.626277 7_4:-55279634 Msa1163870:CDS
TTTAAGGGTAGACGAGGCAA+AGG 0.628328 7_4:-55279337 Msa1163870:CDS
TCGGTATACACATGTAACGT+TGG 0.636000 7_4:+55276690 None:intergenic
TGTATGATTAGCGAGAAAGC+GGG 0.636814 7_4:-55276825 Msa1163870:three_prime_UTR
AGCGAGAAAGCGGGACAGAG+TGG 0.637562 7_4:-55276816 Msa1163870:three_prime_UTR
CAACTGTTTGGGGCTCATGG+TGG 0.640882 7_4:-55277943 Msa1163870:CDS
GAGAAAAGGCCTGCTACATG+GGG 0.647269 7_4:-55277599 Msa1163870:CDS
TGCCTGGGAAGCATTTGACA+AGG 0.649459 7_4:-55278806 Msa1163870:CDS
AAGCGTGTGCGAACAACAGG+CGG 0.649651 7_4:-55279276 Msa1163870:CDS
TGAGGTTGATGAAGATGGCA+AGG 0.654532 7_4:-55283831 Msa1163870:CDS
CTTTGAACTGAAATGAACAC+AGG 0.655688 7_4:+55276896 None:intergenic
GATGTTCTCAAGCTGCCAAG+AGG 0.658614 7_4:-55276859 Msa1163870:three_prime_UTR
CAGTATCCTCTCGAATACGT+AGG 0.658694 7_4:+55279106 None:intergenic
AAGGGCGACCAAAATGATGA+GGG 0.664419 7_4:-55279393 Msa1163870:CDS
GGTAACTCAAGAGGATATGG+AGG 0.664968 7_4:-55276997 Msa1163870:CDS
GCGTGAAGATCCTCTTCCAG+AGG 0.666737 7_4:-55279022 Msa1163870:CDS
ACAAGATGTTCACATGCAAG+CGG 0.667127 7_4:-55278782 Msa1163870:CDS
CATAGTACTAACAAGCCACA+AGG 0.668967 7_4:+55276773 None:intergenic
GCCTGGGAAGCATTTGACAA+GGG 0.670926 7_4:-55278805 Msa1163870:CDS
CAGGAACCTACGTATTCGAG+AGG 0.671211 7_4:-55279112 Msa1163870:CDS
GCAGCTTGAGAACATCACAA+AGG 0.680676 7_4:+55276866 None:intergenic
AGGCATGCATGGAAAGACCA+CGG 0.681793 7_4:-55279614 Msa1163870:CDS
AGATGATTTAAGGGTAGACG+AGG 0.685583 7_4:-55279343 Msa1163870:CDS
CATGGTGGAAGGATCACCAG+TGG 0.686577 7_4:-55277928 Msa1163870:CDS
TGAGGGTGCTGCAATTGATG+AGG 0.706358 7_4:-55279376 Msa1163870:CDS
ATAAAGAACAGATATAACAA+CGG 0.710049 7_4:+55276723 None:intergenic
GGCGCAGATGACATATACTG+AGG 0.723810 7_4:+55283791 None:intergenic
TGGTGGAAGGATCACCAGTG+GGG 0.729242 7_4:-55277926 Msa1163870:CDS
ATGAGCCCCAAACAGTTGTG+TGG 0.736062 7_4:+55277948 None:intergenic
GTGGGAGTACAGGAACTGTG+AGG 0.740528 7_4:-55279254 Msa1163870:intron
AAAACCATTCATCAACACAA+CGG 0.744114 7_4:+55276291 None:intergenic
AGTGGCATTCAAGTCCAGGG+AGG 0.776072 7_4:-55283909 Msa1163870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATAAAAAATAAAAA+AGG - chr7_4:55276292-55276311 Msa1163870:three_prime_UTR 0.0%
!! ATTTAATGATTTCATTATTT+AGG + chr7_4:55279201-55279220 None:intergenic 10.0%
!! TTAATTAATTTAGTTAATGT+AGG - chr7_4:55280612-55280631 Msa1163870:intron 10.0%
!! TAATTAATTTAGTTAATGTA+GGG - chr7_4:55280613-55280632 Msa1163870:intron 10.0%
!! TCATTTAAAAAAAAAATTGA+AGG + chr7_4:55282455-55282474 None:intergenic 10.0%
!! GTTTAATTACAATTAAAAAG+AGG + chr7_4:55276654-55276673 None:intergenic 15.0%
!!! ATGTTAATGAATTTTGTATT+CGG - chr7_4:55276725-55276744 Msa1163870:three_prime_UTR 15.0%
!! TTAAGTATTTGAATTCAAAT+TGG + chr7_4:55277800-55277819 None:intergenic 15.0%
!!! CTTAAATATTTAAGATGAAT+AGG + chr7_4:55277941-55277960 None:intergenic 15.0%
!! TGAGTAAAATTGTAATTTAT+TGG + chr7_4:55278068-55278087 None:intergenic 15.0%
!!! CTGTAATTTATGTTTTAATA+TGG + chr7_4:55278102-55278121 None:intergenic 15.0%
!! TTTAATGTGTAGTTTAATAT+TGG + chr7_4:55278129-55278148 None:intergenic 15.0%
!! TACTCACTTATATATATTTA+TGG + chr7_4:55278379-55278398 None:intergenic 15.0%
!! AAAAAAAGAAAAAAAGAACT+TGG + chr7_4:55278526-55278545 None:intergenic 15.0%
!! TAAACATATTAAGTTATTCT+TGG + chr7_4:55279000-55279019 None:intergenic 15.0%
!! ACAAAATAAAATCTAGTATT+TGG - chr7_4:55280289-55280308 Msa1163870:intron 15.0%
!!! TGTTTTTGTTTTTATTTTGT+AGG - chr7_4:55281778-55281797 Msa1163870:intron 15.0%
!!! GTTTTTGTTTTTATTTTGTA+GGG - chr7_4:55281779-55281798 Msa1163870:intron 15.0%
!! TAAAAAAAAAATTGAAGGTA+CGG + chr7_4:55282450-55282469 None:intergenic 15.0%
!! AAGAGTAAAAAAAATATATG+TGG + chr7_4:55283171-55283190 None:intergenic 15.0%
!!! AATAATTATTTTTTGGATCA+CGG + chr7_4:55284119-55284138 None:intergenic 15.0%
!!! AAAAAATTACAATGTTGTTT+TGG - chr7_4:55284244-55284263 Msa1163870:intron 15.0%
!!! CAATTCAAAAGTACATAATT+AGG + chr7_4:55276676-55276695 None:intergenic 20.0%
!! ACTAATAAAGGAAAGTAATA+TGG + chr7_4:55276944-55276963 None:intergenic 20.0%
!! TCATCTCAAAAAACTAATAA+AGG + chr7_4:55276956-55276975 None:intergenic 20.0%
!!! TCTTCAATAATAGTTTTTCT+AGG + chr7_4:55277095-55277114 None:intergenic 20.0%
!!! GTTTTTTTTTTCAATTGCAA+GGG + chr7_4:55278213-55278232 None:intergenic 20.0%
!!! TGTTTTTTTTTTCAATTGCA+AGG + chr7_4:55278214-55278233 None:intergenic 20.0%
!! TTAAATAGAAATAGCAGAAA+TGG - chr7_4:55278269-55278288 Msa1163870:intron 20.0%
!! ATATTGCTTAGTATAAATCA+AGG + chr7_4:55278354-55278373 None:intergenic 20.0%
!!! AACATACATGTATATTTTGT+GGG - chr7_4:55278441-55278460 Msa1163870:intron 20.0%
!! ACAGAAAAAGAAAAGAAAAA+CGG - chr7_4:55278596-55278615 Msa1163870:CDS 20.0%
!! TTTGAATTATCCTTGAAAAT+TGG + chr7_4:55278753-55278772 None:intergenic 20.0%
!!! ATTACTTTTGTTTATGCAAT+AGG + chr7_4:55278881-55278900 None:intergenic 20.0%
!!! CTAACATTTTTGTTTGTAAT+TGG + chr7_4:55278967-55278986 None:intergenic 20.0%
!! AAGTTACTCTATTTGATAAA+AGG + chr7_4:55279023-55279042 None:intergenic 20.0%
!!! TTTATCACTGATTGATAAAA+AGG + chr7_4:55279261-55279280 None:intergenic 20.0%
!!! ATTTTTTCCTAGATTTTTCA+TGG + chr7_4:55279497-55279516 None:intergenic 20.0%
!! AATAAATATGTATTGTGTCT+CGG - chr7_4:55279783-55279802 Msa1163870:intron 20.0%
!! TACAAGATAATATTATTGCA+AGG - chr7_4:55280663-55280682 Msa1163870:intron 20.0%
!! CAACTGATAATTGTAATTAA+CGG + chr7_4:55281487-55281506 None:intergenic 20.0%
!! ATTACTCTATAAGAATTTCA+AGG - chr7_4:55281922-55281941 Msa1163870:intron 20.0%
!! AAATAGTAAAAAAATGTGTC+AGG + chr7_4:55282339-55282358 None:intergenic 20.0%
!!! AAAAAAAAAATTGAAGGTAC+GGG + chr7_4:55282449-55282468 None:intergenic 20.0%
!!! CTTCTTTTATGTTTGATAAT+TGG - chr7_4:55282953-55282972 Msa1163870:intron 20.0%
!!! CAATATTTAGTTTGAATCAA+TGG + chr7_4:55283362-55283381 None:intergenic 20.0%
!! ATAAAGAACAGATATAACAA+CGG + chr7_4:55283945-55283964 None:intergenic 20.0%
!! GTAATGTTTGAAAAAAAGAA+CGG + chr7_4:55284308-55284327 None:intergenic 20.0%
!!! AATTTTGGTTTAACTTGACT+AGG - chr7_4:55276576-55276595 Msa1163870:three_prime_UTR 25.0%
!!! ATTTTGGTTTAACTTGACTA+GGG - chr7_4:55276577-55276596 Msa1163870:three_prime_UTR 25.0%
!! TTAATGAATTTTGTATTCGG+TGG - chr7_4:55276728-55276747 Msa1163870:three_prime_UTR 25.0%
! AATAAAGGAAAGTAATATGG+AGG + chr7_4:55276941-55276960 None:intergenic 25.0%
! AAACTATTAAGAAGATCTAG+AGG + chr7_4:55277407-55277426 None:intergenic 25.0%
! TGCAAAATATTGTGAAATAG+TGG - chr7_4:55277516-55277535 Msa1163870:intron 25.0%
!!! TAATTAGCCTTGAATTGAAT+GGG + chr7_4:55277902-55277921 None:intergenic 25.0%
! TACTTAGACGCAATTTATAT+AGG - chr7_4:55277990-55278009 Msa1163870:CDS 25.0%
! ACTTAGACGCAATTTATATA+GGG - chr7_4:55277991-55278010 Msa1163870:CDS 25.0%
!! GAACATACATGTATATTTTG+TGG - chr7_4:55278440-55278459 Msa1163870:intron 25.0%
! AACAATCATACATGAGAATA+TGG - chr7_4:55278726-55278745 Msa1163870:CDS 25.0%
!! TTTTTCTGTTGATCAAAATG+TGG + chr7_4:55278842-55278861 None:intergenic 25.0%
! AAGCAGAAAAATAGAAACAA+CGG - chr7_4:55279309-55279328 Msa1163870:CDS 25.0%
! AAAGAAAAGAAATAACAGTG+TGG - chr7_4:55279350-55279369 Msa1163870:CDS 25.0%
!! ATTCTGTGCTTTTGAATTTA+TGG + chr7_4:55279408-55279427 None:intergenic 25.0%
! TTGAAAACAGGTAAAATCTA+GGG + chr7_4:55279436-55279455 None:intergenic 25.0%
! ATTGAAAACAGGTAAAATCT+AGG + chr7_4:55279437-55279456 None:intergenic 25.0%
! AACATGACAATTATCAATTG+TGG + chr7_4:55280013-55280032 None:intergenic 25.0%
!!! ACTGATTTTGTTGGATATAT+GGG - chr7_4:55280522-55280541 Msa1163870:CDS 25.0%
!! CATATTTGGTTTATAAGTAC+TGG - chr7_4:55280583-55280602 Msa1163870:CDS 25.0%
! ACTATATAACAAAACTGTCA+AGG - chr7_4:55280880-55280899 Msa1163870:intron 25.0%
! CTACTTAATATATGTTGAGA+CGG + chr7_4:55280778-55280797 None:intergenic 25.0%
! TGAAGATGAAGATGATTTAA+GGG - chr7_4:55281313-55281332 Msa1163870:intron 25.0%
! GTAAATATATCTTAACGTTC+AGG - chr7_4:55281534-55281553 Msa1163870:intron 25.0%
!! TCCAAATGAAAAGTTTTACT+TGG - chr7_4:55281670-55281689 Msa1163870:intron 25.0%
!! ACCAAGTAAAACTTTTCATT+TGG + chr7_4:55281674-55281693 None:intergenic 25.0%
!!! AGTAAGAAGCTTTAAAGTAT+GGG + chr7_4:55282212-55282231 None:intergenic 25.0%
!!! ATGATTTGCTCTTTTTATCA+AGG - chr7_4:55282545-55282564 Msa1163870:intron 25.0%
! TAGAATTGAACGAAAATCAA+TGG + chr7_4:55282576-55282595 None:intergenic 25.0%
!! ATTCTAAGCATTATGCTTTT+AGG - chr7_4:55282590-55282609 Msa1163870:intron 25.0%
!! ATTTATCTGTTGCTTCTAAT+AGG - chr7_4:55282645-55282664 Msa1163870:intron 25.0%
! TTAATAACAAAGAGAAGAGA+AGG + chr7_4:55282930-55282949 None:intergenic 25.0%
!! TTTATGTTTGATAATTGGTG+TGG - chr7_4:55282958-55282977 Msa1163870:intron 25.0%
! AATAGAACTCATTAACATCA+AGG + chr7_4:55283254-55283273 None:intergenic 25.0%
! TAGCATAAAGTCATTTATTC+TGG - chr7_4:55283425-55283444 Msa1163870:intron 25.0%
! AAACGATTTAAAAATCTGCA+AGG + chr7_4:55283637-55283656 None:intergenic 25.0%
!!! TAAATCGTTTTAATCCAAAC+AGG - chr7_4:55283647-55283666 Msa1163870:intron 25.0%
! TTCAGGAAAAATTCTTCATT+GGG + chr7_4:55283725-55283744 None:intergenic 25.0%
!!! CTATGCATTATTTTAGCATT+TGG - chr7_4:55283910-55283929 Msa1163870:CDS 25.0%
!! ACTATTGATTGTTCTATTTC+TGG - chr7_4:55284075-55284094 Msa1163870:intron 25.0%
! TGTTAAAGATATAACAAGAC+AGG - chr7_4:55284163-55284182 Msa1163870:intron 25.0%
!! TTTGTGTTTGTTACAATTGA+GGG + chr7_4:55284332-55284351 None:intergenic 25.0%
!! ATTTGTGTTTGTTACAATTG+AGG + chr7_4:55284333-55284352 None:intergenic 25.0%
AGTTACCTAAAATCCCAAAT+TGG - chr7_4:55276327-55276346 Msa1163870:three_prime_UTR 30.0%
AAAGGATCGAAATTGAATTG+AGG + chr7_4:55276446-55276465 None:intergenic 30.0%
CGGGAATGAAAATTTGTAAA+AGG + chr7_4:55276464-55276483 None:intergenic 30.0%
TCATCGATAAACAAGATGTT+CGG + chr7_4:55276484-55276503 None:intergenic 30.0%
TCTGAATTGGATCAAAAAGA+TGG + chr7_4:55276509-55276528 None:intergenic 30.0%
TGACATATACTGAGGAATAT+GGG + chr7_4:55276869-55276888 None:intergenic 30.0%
ATGACATATACTGAGGAATA+TGG + chr7_4:55276870-55276889 None:intergenic 30.0%
!!! TTTTTTGAGATGAGAGAGTT+GGG - chr7_4:55276963-55276982 Msa1163870:CDS 30.0%
AACACCTATAGTAGAAAAGA+TGG - chr7_4:55276987-55277006 Msa1163870:CDS 30.0%
AGATCTAGAGATTAATGAGT+TGG - chr7_4:55277112-55277131 Msa1163870:CDS 30.0%
AATAACAACAACAACAACCA+AGG + chr7_4:55277213-55277232 None:intergenic 30.0%
!!! GTTTCTCTTCTAGTTTTTCT+AGG - chr7_4:55277423-55277442 Msa1163870:intron 30.0%
AATTATCAATTGTGGATCAC+AGG + chr7_4:55277586-55277605 None:intergenic 30.0%
CACATGACAATTATCAATTG+TGG + chr7_4:55277594-55277613 None:intergenic 30.0%
!! ACTAAACCGAAGCTTTAAAT+GGG + chr7_4:55277712-55277731 None:intergenic 30.0%
! ATTTAAAGCTTCGGTTTAGT+CGG - chr7_4:55277712-55277731 Msa1163870:intron 30.0%
!! TCAATCGGTTAAGTTGAAAA+AGG - chr7_4:55277773-55277792 Msa1163870:intron 30.0%
!! CAATCGGTTAAGTTGAAAAA+GGG - chr7_4:55277774-55277793 Msa1163870:intron 30.0%
TATTAAGCCCATTCAATTCA+AGG - chr7_4:55277892-55277911 Msa1163870:CDS 30.0%
!! CTAATTAGCCTTGAATTGAA+TGG + chr7_4:55277903-55277922 None:intergenic 30.0%
!! AATTGCGTCTAAGTATTGAA+TGG + chr7_4:55277985-55278004 None:intergenic 30.0%
ACAATGAAACTCATCATCAA+TGG - chr7_4:55278231-55278250 Msa1163870:intron 30.0%
TGATATAGCTTCTAAGTGAT+AGG - chr7_4:55278315-55278334 Msa1163870:intron 30.0%
TTATGATTGTGCAATTATGC+AGG + chr7_4:55278410-55278429 None:intergenic 30.0%
!! GTATATTTTGTGGGTTTGTT+TGG - chr7_4:55278450-55278469 Msa1163870:intron 30.0%
! CTATTTGTCTGCTTAACTTT+TGG + chr7_4:55278495-55278514 None:intergenic 30.0%
! AGAATATGGTCCAATTTTCA+AGG - chr7_4:55278740-55278759 Msa1163870:CDS 30.0%
! TGAGTTTGAGTTTATGCAAT+AGG + chr7_4:55278794-55278813 None:intergenic 30.0%
! TGAGTTTGAGTTTATGCAAT+AGG + chr7_4:55278794-55278813 None:intergenic 30.0%
TCACTTGTAAATTAGAAGCA+AGG + chr7_4:55279055-55279074 None:intergenic 30.0%
CTTATTACTTGTAGATCAGA+AGG + chr7_4:55279292-55279311 None:intergenic 30.0%
AAAAATAGAAACAACGGCAT+AGG - chr7_4:55279315-55279334 Msa1163870:CDS 30.0%
! GATTTTACCTGTTTTCAATC+AGG - chr7_4:55279438-55279457 Msa1163870:CDS 30.0%
AAATTAGATCTTAGACGAAG+TGG - chr7_4:55279534-55279553 Msa1163870:CDS 30.0%
AAGAGGATTGTTTATTTGTG+CGG - chr7_4:55279663-55279682 Msa1163870:intron 30.0%
! GTTGCATTTGAACAAGTTTT+TGG - chr7_4:55279741-55279760 Msa1163870:intron 30.0%
GTTTCAAACTCTACATTTGA+AGG + chr7_4:55280074-55280093 None:intergenic 30.0%
! TGTAGAGTTTGAAACATCAA+AGG - chr7_4:55280079-55280098 Msa1163870:intron 30.0%
! GTTTGAAACATCAAAGGAAA+TGG - chr7_4:55280085-55280104 Msa1163870:intron 30.0%
!! TGTATTTTTCGATGTGTTAG+TGG - chr7_4:55280322-55280341 Msa1163870:intron 30.0%
CAAAAACCATGTATTAATCC+AGG + chr7_4:55280484-55280503 None:intergenic 30.0%
ATCCAACAAAATCAGTCAAA+AGG + chr7_4:55280518-55280537 None:intergenic 30.0%
!! GACTGATTTTGTTGGATATA+TGG - chr7_4:55280521-55280540 Msa1163870:CDS 30.0%
! TATGGGTTGAATTGCATATT+AGG - chr7_4:55280539-55280558 Msa1163870:CDS 30.0%
ATAATATTATTGCAAGGCGA+AGG - chr7_4:55280669-55280688 Msa1163870:intron 30.0%
TAATATTATTGCAAGGCGAA+GGG - chr7_4:55280670-55280689 Msa1163870:intron 30.0%
! CATTTGCTTTGTTATAGAGT+TGG - chr7_4:55280740-55280759 Msa1163870:intron 30.0%
TTATAGAGTTGGAATGAGAA+TGG - chr7_4:55280751-55280770 Msa1163870:intron 30.0%
AATATATGTTGAGACAAGCA+AGG - chr7_4:55280784-55280803 Msa1163870:intron 30.0%
!! TTGACAATTCAAGTTTGCTA+AGG + chr7_4:55280845-55280864 None:intergenic 30.0%
! TCATCTTCTTTTTATAGCTG+CGG - chr7_4:55281008-55281027 Msa1163870:intron 30.0%
CTGAAGATGAAGATGATTTA+AGG - chr7_4:55281312-55281331 Msa1163870:intron 30.0%
TGCGTGTTAATCTTTGTATT+TGG - chr7_4:55281746-55281765 Msa1163870:intron 30.0%
GCGTGTTAATCTTTGTATTT+GGG - chr7_4:55281747-55281766 Msa1163870:intron 30.0%
GATAACCAATATAGAAGTAG+TGG - chr7_4:55281803-55281822 Msa1163870:intron 30.0%
CTTATAGAGTAATTCAGCTT+GGG + chr7_4:55281915-55281934 None:intergenic 30.0%
TCTTATAGAGTAATTCAGCT+TGG + chr7_4:55281916-55281935 None:intergenic 30.0%
TAAGAATTTCAAGGTCATGA+AGG - chr7_4:55281931-55281950 Msa1163870:intron 30.0%
GAAATTGAAGTCTCAAACAA+AGG - chr7_4:55281955-55281974 Msa1163870:intron 30.0%
GACACTATTATTGAGAAGTA+TGG - chr7_4:55281977-55281996 Msa1163870:intron 30.0%
!! GAGTAAGAAGCTTTAAAGTA+TGG + chr7_4:55282213-55282232 None:intergenic 30.0%
! TCCGTTTGAAGTTAAATTTG+CGG - chr7_4:55282247-55282266 Msa1163870:intron 30.0%
! ACCGCAAATTTAACTTCAAA+CGG + chr7_4:55282251-55282270 None:intergenic 30.0%
! ATTTTCTTGAATCTGTACAG+AGG - chr7_4:55283026-55283045 Msa1163870:intron 30.0%
!!! CTTTTCTCTTCTATTGGTTT+AGG + chr7_4:55283054-55283073 None:intergenic 30.0%
CTAAACCAATAGAAGAGAAA+AGG - chr7_4:55283052-55283071 Msa1163870:intron 30.0%
!!! TATTACCTTTTTGAGTGCAT+CGG + chr7_4:55283136-55283155 None:intergenic 30.0%
TAAAAATATATACCCAGAGG+AGG + chr7_4:55283219-55283238 None:intergenic 30.0%
GAGTAAAAATATATACCCAG+AGG + chr7_4:55283222-55283241 None:intergenic 30.0%
! TTTTCTTATTCTACCTTCTG+TGG - chr7_4:55283278-55283297 Msa1163870:intron 30.0%
ATAATAATCAACTCCACAGA+AGG + chr7_4:55283294-55283313 None:intergenic 30.0%
! TGTCTAGACCTTGATAATTA+AGG + chr7_4:55283339-55283358 None:intergenic 30.0%
TGGATATTTGAATCTGTTTG+AGG - chr7_4:55283445-55283464 Msa1163870:intron 30.0%
AGCGTAAATATAATGTCAGA+TGG - chr7_4:55283549-55283568 Msa1163870:intron 30.0%
AAAATTATCAACCAGTGACA+TGG + chr7_4:55283596-55283615 None:intergenic 30.0%
GTTCAGGAAAAATTCTTCAT+TGG + chr7_4:55283726-55283745 None:intergenic 30.0%
! AATTTTTCCTGAACTAAGCT+TGG - chr7_4:55283732-55283751 Msa1163870:intron 30.0%
!! ATTTTAGCATTTGGAACACT+TGG - chr7_4:55283919-55283938 Msa1163870:intron 30.0%
CAAAGACATAGTAAAACGAT+CGG + chr7_4:55283997-55284016 None:intergenic 30.0%
! TATGTCTTTGAGAAACCTTA+GGG - chr7_4:55284007-55284026 Msa1163870:intron 30.0%
! TTGTGTTTGTTACAATTGAG+GGG + chr7_4:55284331-55284350 None:intergenic 30.0%
AAAACCATTCATCAACACAA+CGG + chr7_4:55284377-55284396 None:intergenic 30.0%
!! ACACTCCAATTTGGGATTTT+AGG + chr7_4:55276335-55276354 None:intergenic 35.0%
GAAGAATCACACTCCAATTT+GGG + chr7_4:55276343-55276362 None:intergenic 35.0%
TTCTGCGTTTGATCACAAAA+TGG - chr7_4:55276394-55276413 Msa1163870:three_prime_UTR 35.0%
CATCGATAAACAAGATGTTC+GGG + chr7_4:55276483-55276502 None:intergenic 35.0%
TCACGTTCTTCAATCTGAAT+TGG + chr7_4:55276522-55276541 None:intergenic 35.0%
GACATATACTGAGGAATATG+GGG + chr7_4:55276868-55276887 None:intergenic 35.0%
!!! GTTTTTTGAGATGAGAGAGT+TGG - chr7_4:55276962-55276981 Msa1163870:CDS 35.0%
ACCTATAGTAGAAAAGATGG+TGG - chr7_4:55276990-55277009 Msa1163870:CDS 35.0%
! TCCACCATCTTTTCTACTAT+AGG + chr7_4:55276994-55277013 None:intergenic 35.0%
!! TAGAAAAGATGGTGGAAACT+AGG - chr7_4:55276998-55277017 Msa1163870:CDS 35.0%
AAACTAGGCTTAAGTGGTTT+GGG - chr7_4:55277013-55277032 Msa1163870:intron 35.0%
! AGTCAGATCTTTAGAGACAA+AGG - chr7_4:55277065-55277084 Msa1163870:intron 35.0%
TTGTTGTAATAGCGCTATAG+CGG + chr7_4:55277287-55277306 None:intergenic 35.0%
! TGGTTTTCGATAGAACACTA+TGG + chr7_4:55277363-55277382 None:intergenic 35.0%
! TAATGAGTTGGAGAAAGACA+TGG + chr7_4:55277383-55277402 None:intergenic 35.0%
AGATCTAGAGGTTAATGAGT+TGG + chr7_4:55277395-55277414 None:intergenic 35.0%
AATAGCATATCGCAGAACAA+CGG + chr7_4:55277493-55277512 None:intergenic 35.0%
TGATAATTGTCATGTGAGCT+AGG - chr7_4:55277598-55277617 Msa1163870:CDS 35.0%
GATAATTGTCATGTGAGCTA+GGG - chr7_4:55277599-55277618 Msa1163870:CDS 35.0%
!! GACTAAACCGAAGCTTTAAA+TGG + chr7_4:55277713-55277732 None:intergenic 35.0%
!! TTAGTCGGTTTCGGTTTTAT+CGG - chr7_4:55277727-55277746 Msa1163870:intron 35.0%
AGTCATTGATCATCAATCCA+AGG - chr7_4:55277959-55277978 Msa1163870:CDS 35.0%
!! AGCTTGTTGAGGATTCAATT+TGG - chr7_4:55278179-55278198 Msa1163870:intron 35.0%
TCTAAACTGTCAAGAAATGG+TGG + chr7_4:55279469-55279488 None:intergenic 35.0%
TGGTCTAAACTGTCAAGAAA+TGG + chr7_4:55279472-55279491 None:intergenic 35.0%
ATTTCTTGACAGTTTAGACC+AGG - chr7_4:55279471-55279490 Msa1163870:CDS 35.0%
! GAAGTTGATCAAAGATTCGT+CGG - chr7_4:55279590-55279609 Msa1163870:CDS 35.0%
ACAAAAGAGTGAATGAGAAG+AGG - chr7_4:55279646-55279665 Msa1163870:intron 35.0%
AATATGTATTGTGTCTCGGT+CGG - chr7_4:55279787-55279806 Msa1163870:intron 35.0%
TTTCGATGGCCAAATAAAGT+TGG - chr7_4:55279817-55279836 Msa1163870:intron 35.0%
TTCGATGGCCAAATAAAGTT+GGG - chr7_4:55279818-55279837 Msa1163870:intron 35.0%
!!! TAGAGGTGCTAAAACTTTTC+AGG - chr7_4:55280143-55280162 Msa1163870:intron 35.0%
CAAGATACATCCATCACATT+TGG + chr7_4:55280254-55280273 None:intergenic 35.0%
!! GACCTTTTGACTGATTTTGT+TGG - chr7_4:55280513-55280532 Msa1163870:CDS 35.0%
TCTACTTTGCACTGCATATT+TGG - chr7_4:55280569-55280588 Msa1163870:CDS 35.0%
! GTTATCAACCTTGACAGTTT+TGG - chr7_4:55280806-55280825 Msa1163870:intron 35.0%
AATACATGTTGAGACAAGCA+AGG + chr7_4:55280913-55280932 None:intergenic 35.0%
! ACTTTTGAGCTTGACTATGA+TGG - chr7_4:55281128-55281147 Msa1163870:intron 35.0%
TGCTCTCATTGTAATAATGC+AGG - chr7_4:55281446-55281465 Msa1163870:intron 35.0%
GCTCTCATTGTAATAATGCA+GGG - chr7_4:55281447-55281466 Msa1163870:intron 35.0%
CTTGACCACTACTTCTATAT+TGG + chr7_4:55281811-55281830 None:intergenic 35.0%
CAAACGGAATAATGAGAGAA+GGG + chr7_4:55282235-55282254 None:intergenic 35.0%
TCAAACGGAATAATGAGAGA+AGG + chr7_4:55282236-55282255 None:intergenic 35.0%
ACAAAGAAGCAATGATGCAT+AGG + chr7_4:55282507-55282526 None:intergenic 35.0%
!!! TTTAGGTTTTGCTGTTCGTT+AGG - chr7_4:55282607-55282626 Msa1163870:intron 35.0%
ATACGTAATAGCTATTGCAC+TGG - chr7_4:55282784-55282803 Msa1163870:intron 35.0%
ATAACAAAGAGAAGAGAAGG+AGG + chr7_4:55282927-55282946 None:intergenic 35.0%
GGAGGTGATAACAAATATCA+AGG + chr7_4:55283201-55283220 None:intergenic 35.0%
!! ATATTTGTTATCACCTCCTC+TGG - chr7_4:55283203-55283222 Msa1163870:intron 35.0%
!! TATTTGTTATCACCTCCTCT+GGG - chr7_4:55283204-55283223 Msa1163870:intron 35.0%
TTCGTCTGCCTTAATTATCA+AGG - chr7_4:55283328-55283347 Msa1163870:intron 35.0%
TGTAATCTGTAGAAACGTGA+TGG - chr7_4:55283384-55283403 Msa1163870:intron 35.0%
GATATTCATGTGCATTGTAC+TGG - chr7_4:55283479-55283498 Msa1163870:intron 35.0%
!! GCATTGTACTGGTATTTTAC+AGG - chr7_4:55283490-55283509 Msa1163870:intron 35.0%
!! TTGTACTGGTATTTTACAGG+AGG - chr7_4:55283493-55283512 Msa1163870:intron 35.0%
TAATGTCAGATGGAATGATC+AGG - chr7_4:55283559-55283578 Msa1163870:intron 35.0%
!!! TATGGTTTTTTCCATGTCAC+TGG - chr7_4:55283582-55283601 Msa1163870:intron 35.0%
CGATTTAAAAATCTGCAAGG+AGG + chr7_4:55283634-55283653 None:intergenic 35.0%
CTTTGAACTGAAATGAACAC+AGG + chr7_4:55283772-55283791 None:intergenic 35.0%
TTGATATTTGAACAGCCTTG+TGG - chr7_4:55283877-55283896 Msa1163870:CDS 35.0%
! CTATGTCTTTGAGAAACCTT+AGG - chr7_4:55284006-55284025 Msa1163870:intron 35.0%
CTACTAGCATATACTTGAAC+TGG + chr7_4:55284051-55284070 None:intergenic 35.0%
! TGTGTTTGTTACAATTGAGG+GGG + chr7_4:55284330-55284349 None:intergenic 35.0%
! AATACCGTTGTGTTGATGAA+TGG - chr7_4:55284370-55284389 Msa1163870:five_prime_UTR 35.0%
AAAGAAGCCATAGTTGTTCA+TGG - chr7_4:55284403-55284422 Msa1163870:five_prime_UTR 35.0%
CGAAGAATCACACTCCAATT+TGG + chr7_4:55276344-55276363 None:intergenic 40.0%
TCGAAAACAGATTGAGCTTG+AGG - chr7_4:55276783-55276802 Msa1163870:three_prime_UTR 40.0%
GAAAAAACTTACGGGTCTCT+CGG + chr7_4:55276914-55276933 None:intergenic 40.0%
GAGGAGAGGAAAAAACTTAC+GGG + chr7_4:55276922-55276941 None:intergenic 40.0%
GGAGGAGAGGAAAAAACTTA+CGG + chr7_4:55276923-55276942 None:intergenic 40.0%
AGGAAAGTAATATGGAGGAG+AGG + chr7_4:55276936-55276955 None:intergenic 40.0%
GAAACTAGGCTTAAGTGGTT+TGG - chr7_4:55277012-55277031 Msa1163870:intron 40.0%
GTTATAGCACTGTTGTGTAG+CGG - chr7_4:55277540-55277559 Msa1163870:CDS 40.0%
TTGTGGATCACAGGAAATAG+TGG + chr7_4:55277577-55277596 None:intergenic 40.0%
!! TTAGTGTGGGTTGAGGTTTT+GGG + chr7_4:55277658-55277677 None:intergenic 40.0%
!! AGCTTTAAATGGGCGGAATT+GGG + chr7_4:55277702-55277721 None:intergenic 40.0%
!! AAGCTTTAAATGGGCGGAAT+TGG + chr7_4:55277703-55277722 None:intergenic 40.0%
! ATTCCGCCCATTTAAAGCTT+CGG - chr7_4:55277703-55277722 Msa1163870:intron 40.0%
!! AAACCGAAGCTTTAAATGGG+CGG + chr7_4:55277709-55277728 None:intergenic 40.0%
!! TTCGGTTTTATCGGATAAGC+CGG - chr7_4:55277736-55277755 Msa1163870:intron 40.0%
!! GTCTAAGTATTGAATGGCCT+TGG + chr7_4:55277979-55277998 None:intergenic 40.0%
CGCAATTTATATAGGGTCCA+AGG - chr7_4:55277998-55278017 Msa1163870:CDS 40.0%
!! ATGAATTCTGCAGCTTGTTG+AGG - chr7_4:55278168-55278187 Msa1163870:intron 40.0%
AACTCGAATCAGCAGAACTT+AGG - chr7_4:55279118-55279137 Msa1163870:intron 40.0%
GGCTTATCCTGATTGAAAAC+AGG + chr7_4:55279448-55279467 None:intergenic 40.0%
! TTCCTAGATTTTTCATGGCC+TGG + chr7_4:55279492-55279511 None:intergenic 40.0%
! CTTAGAAATTCGGATTGGAC+TGG + chr7_4:55279864-55279883 None:intergenic 40.0%
TACCATGATGTGGTGTAGTT+GGG + chr7_4:55280120-55280139 None:intergenic 40.0%
TGCACCTTTCCTATACTTCT+GGG + chr7_4:55280169-55280188 None:intergenic 40.0%
ATGCACCTTTCCTATACTTC+TGG + chr7_4:55280170-55280189 None:intergenic 40.0%
GATACATCCATCACATTTGG+AGG + chr7_4:55280251-55280270 None:intergenic 40.0%
TACACGCCTGGATTAATACA+TGG - chr7_4:55280475-55280494 Msa1163870:intron 40.0%
!! CGAAGGGCATCTTAATAGTT+GGG - chr7_4:55280686-55280705 Msa1163870:intron 40.0%
GGCATCTTAATAGTTGGGTT+GGG - chr7_4:55280691-55280710 Msa1163870:intron 40.0%
TGTGTCTACCAAAACTGTCA+AGG + chr7_4:55280817-55280836 None:intergenic 40.0%
!! TGACAGTTTTGGTAGACACA+TGG - chr7_4:55280817-55280836 Msa1163870:intron 40.0%
CCTAAACTTGTACGAGAGAA+TGG + chr7_4:55280973-55280992 None:intergenic 40.0%
CCATTCTCTCGTACAAGTTT+AGG - chr7_4:55280970-55280989 Msa1163870:intron 40.0%
AGCTATGACACATAATGCCA+AGG - chr7_4:55281031-55281050 Msa1163870:intron 40.0%
AGCTTGACTATGATGGCAAA+CGG - chr7_4:55281135-55281154 Msa1163870:intron 40.0%
AGATGATTTAAGGGTAGACG+AGG - chr7_4:55281322-55281341 Msa1163870:intron 40.0%
!! GGTTGATGAAAGCAAACAGA+TGG - chr7_4:55281349-55281368 Msa1163870:intron 40.0%
! CAAACAGATGGACTTTGCAA+AGG - chr7_4:55281361-55281380 Msa1163870:intron 40.0%
! TTTTCATTTGGATCTGCCTC+TGG + chr7_4:55281662-55281681 None:intergenic 40.0%
TAGAAGTAGTGGTCAAGCTT+TGG - chr7_4:55281814-55281833 Msa1163870:intron 40.0%
!! TGGTCAAGCTTTGGAATTCA+AGG - chr7_4:55281823-55281842 Msa1163870:intron 40.0%
ACAAGATGTTCACATGCAAG+CGG - chr7_4:55281883-55281902 Msa1163870:intron 40.0%
TAGAGTAATTCAGCTTGGGA+AGG + chr7_4:55281911-55281930 None:intergenic 40.0%
ACTTCCAAGAGAACTTCTTC+TGG - chr7_4:55282021-55282040 Msa1163870:intron 40.0%
CTTCCAAGAGAACTTCTTCT+GGG - chr7_4:55282022-55282041 Msa1163870:intron 40.0%
! TCGTGCTGGTAGAATTGTTA+AGG - chr7_4:55282072-55282091 Msa1163870:intron 40.0%
! CGTGCTGGTAGAATTGTTAA+GGG - chr7_4:55282073-55282092 Msa1163870:intron 40.0%
TGGTAGAATTGTTAAGGGAC+AGG - chr7_4:55282078-55282097 Msa1163870:intron 40.0%
TAAATGATGTATCCCGTACC+TGG - chr7_4:55282468-55282487 Msa1163870:intron 40.0%
TCCTCTTCATACTTGCTTCT+GGG + chr7_4:55282682-55282701 None:intergenic 40.0%
ATCCTCTTCATACTTGCTTC+TGG + chr7_4:55282683-55282702 None:intergenic 40.0%
TCAACAACCACACAACTGTT+TGG - chr7_4:55282710-55282729 Msa1163870:intron 40.0%
CAACAACCACACAACTGTTT+GGG - chr7_4:55282711-55282730 Msa1163870:intron 40.0%
AACAACCACACAACTGTTTG+GGG - chr7_4:55282712-55282731 Msa1163870:intron 40.0%
GAGAGCTAATATTGCACGTA+AGG - chr7_4:55282849-55282868 Msa1163870:intron 40.0%
AGAGAGAAGAGAAAGATGAG+AGG - chr7_4:55283525-55283544 Msa1163870:intron 40.0%
TCAGATGGAATGATCAGGTA+TGG - chr7_4:55283564-55283583 Msa1163870:intron 40.0%
ATCCAAACAGGTAACTCAAG+AGG - chr7_4:55283659-55283678 Msa1163870:intron 40.0%
ATCCTCTTGAGTTACCTGTT+TGG + chr7_4:55283664-55283683 None:intergenic 40.0%
ACAGGTAACTCAAGAGGATA+TGG - chr7_4:55283665-55283684 Msa1163870:intron 40.0%
! GAAATGAACACAGGCCTTTT+TGG + chr7_4:55283763-55283782 None:intergenic 40.0%
GTGTATGATTAGCGAGAAAG+CGG - chr7_4:55283839-55283858 Msa1163870:CDS 40.0%
TGTATGATTAGCGAGAAAGC+GGG - chr7_4:55283840-55283859 Msa1163870:CDS 40.0%
CATAGTACTAACAAGCCACA+AGG + chr7_4:55283895-55283914 None:intergenic 40.0%
TCGGTATACACATGTAACGT+TGG + chr7_4:55283978-55283997 None:intergenic 40.0%
GTTTGAAAAAAAGAACGGCG+AGG + chr7_4:55284303-55284322 None:intergenic 40.0%
! CACAACGGTATTTGAGACAT+AGG + chr7_4:55284362-55284381 None:intergenic 40.0%
CACAAAATGGCAACAGCTTC+AGG - chr7_4:55276407-55276426 Msa1163870:three_prime_UTR 45.0%
!! TTGTATTCGGTGGATTGCAG+TGG - chr7_4:55276738-55276757 Msa1163870:three_prime_UTR 45.0%
!! TGAGGTTGATGAAGATGGCA+AGG - chr7_4:55276834-55276853 Msa1163870:three_prime_UTR 45.0%
AGTATATGTCATCTGCGCCT+TGG - chr7_4:55276878-55276897 Msa1163870:three_prime_UTR 45.0%
CTCTCGGCATTAAGATACCA+AGG + chr7_4:55276898-55276917 None:intergenic 45.0%
TGGTGGAAACTAGGCTTAAG+TGG - chr7_4:55277007-55277026 Msa1163870:intron 45.0%
CTTATCCCACTAAGTCAGGT+GGG + chr7_4:55277190-55277209 None:intergenic 45.0%
AAGGCTTATCCCACTAAGTC+AGG + chr7_4:55277194-55277213 None:intergenic 45.0%
TGACTTAGTGGGATAAGCCT+TGG - chr7_4:55277193-55277212 Msa1163870:intron 45.0%
! CAAGCCTTTTCCCACTAAGT+GGG - chr7_4:55277311-55277330 Msa1163870:intron 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - chr7_4:55277312-55277331 Msa1163870:intron 45.0%
!! GTTAGTGTGGGTTGAGGTTT+TGG + chr7_4:55277659-55277678 None:intergenic 45.0%
!! TTACAACCGTGGGTTAGTGT+GGG + chr7_4:55277671-55277690 None:intergenic 45.0%
AACCCACGGTTGTAACTACT+AGG - chr7_4:55277676-55277695 Msa1163870:intron 45.0%
! AGCTTCGGTTTAGTCGGTTT+CGG - chr7_4:55277718-55277737 Msa1163870:intron 45.0%
! TATCGGATAAGCCGGTTTCA+CGG - chr7_4:55277744-55277763 Msa1163870:intron 45.0%
TCCAAGGCATGCTGATGTAT+AGG - chr7_4:55278014-55278033 Msa1163870:intron 45.0%
CCAAGGCATGCTGATGTATA+GGG - chr7_4:55278015-55278034 Msa1163870:intron 45.0%
ATGCTGATGTATAGGGTCCA+AGG - chr7_4:55278022-55278041 Msa1163870:intron 45.0%
GACCAGGCCATGAAAAATCT+AGG - chr7_4:55279487-55279506 Msa1163870:CDS 45.0%
GTCGGAGTGAAGTGATTGTT+GGG - chr7_4:55279608-55279627 Msa1163870:CDS 45.0%
GAGTGAAGTGATTGTTGGGA+CGG - chr7_4:55279612-55279631 Msa1163870:CDS 45.0%
TGTTTATTTGTGCGGCTGCT+AGG - chr7_4:55279671-55279690 Msa1163870:intron 45.0%
GTTTATTTGTGCGGCTGCTA+GGG - chr7_4:55279672-55279691 Msa1163870:intron 45.0%
TATTGTGTCTCGGTCGGTAT+TGG - chr7_4:55279793-55279812 Msa1163870:intron 45.0%
ATTGTGTCTCGGTCGGTATT+GGG - chr7_4:55279794-55279813 Msa1163870:intron 45.0%
CGGGTCTTAGAAATTCGGAT+TGG + chr7_4:55279869-55279888 None:intergenic 45.0%
TCGCTCGGGTCTTAGAAATT+CGG + chr7_4:55279874-55279893 None:intergenic 45.0%
TTCATGTGGGCCGGATATTA+CGG - chr7_4:55279926-55279945 Msa1163870:intron 45.0%
ATGTTTGCTCACATTAGCGC+TGG + chr7_4:55279977-55279996 None:intergenic 45.0%
ATCCCAACTACACCACATCA+TGG - chr7_4:55280115-55280134 Msa1163870:intron 45.0%
GTACCATGATGTGGTGTAGT+TGG + chr7_4:55280121-55280140 None:intergenic 45.0%
ACCACATCATGGTACGATAG+AGG - chr7_4:55280126-55280145 Msa1163870:intron 45.0%
ACCTCTATCGTACCATGATG+TGG + chr7_4:55280130-55280149 None:intergenic 45.0%
!! CTTTTCAGGCCCAGAAGTAT+AGG - chr7_4:55280157-55280176 Msa1163870:intron 45.0%
TGTTGTGCCTCCAAATGTGA+TGG - chr7_4:55280241-55280260 Msa1163870:intron 45.0%
! GTCTTGTTAGTTTACACGCC+TGG - chr7_4:55280463-55280482 Msa1163870:intron 45.0%
!! GCGAAGGGCATCTTAATAGT+TGG - chr7_4:55280685-55280704 Msa1163870:intron 45.0%
GGGCATCTTAATAGTTGGGT+TGG - chr7_4:55280690-55280709 Msa1163870:intron 45.0%
ACATAATGCCAAGGCATGCA+TGG - chr7_4:55281040-55281059 Msa1163870:intron 45.0%
ATGGAAAGACCACGGAAAGT+AGG - chr7_4:55281059-55281078 Msa1163870:intron 45.0%
GCACATTGCTGCTGATGAAA+AGG - chr7_4:55281100-55281119 Msa1163870:intron 45.0%
GCTTGACTATGATGGCAAAC+GGG - chr7_4:55281136-55281155 Msa1163870:intron 45.0%
CGCTCGAAAGAAGTTCTTGA+AGG - chr7_4:55281226-55281245 Msa1163870:intron 45.0%
AAGGGCGACCAAAATGATGA+GGG - chr7_4:55281272-55281291 Msa1163870:intron 45.0%
! TTGCAGCACCCTCATCATTT+TGG + chr7_4:55281283-55281302 None:intergenic 45.0%
TTTAAGGGTAGACGAGGCAA+AGG - chr7_4:55281328-55281347 Msa1163870:intron 45.0%
! TAATGCAGGGCGAAGTTGAT+TGG - chr7_4:55281460-55281479 Msa1163870:intron 45.0%
CAGTATCCTCTCGAATACGT+AGG + chr7_4:55281562-55281581 None:intergenic 45.0%
AGGACTTAAACATCCATGCC+TGG - chr7_4:55281843-55281862 Msa1163870:intron 45.0%
GGACTTAAACATCCATGCCT+GGG - chr7_4:55281844-55281863 Msa1163870:intron 45.0%
TGACCCAGAAGAAGTTCTCT+TGG + chr7_4:55282028-55282047 None:intergenic 45.0%
! CAAGTTGAGTATGATCGTGC+TGG - chr7_4:55282058-55282077 Msa1163870:intron 45.0%
TACGAGTACAGTACCAGGTA+CGG + chr7_4:55282484-55282503 None:intergenic 45.0%
ATAGGTACGAGTACAGTACC+AGG + chr7_4:55282489-55282508 None:intergenic 45.0%
CCTCTTCATACTTGCTTCTG+GGG + chr7_4:55282681-55282700 None:intergenic 45.0%
! TGCAGCATTTAAAACCCCAC+TGG + chr7_4:55282756-55282775 None:intergenic 45.0%
AGAAGAGAAGGAGGAGATAG+AGG + chr7_4:55282918-55282937 None:intergenic 45.0%
! GCAGGCCTTTTCTCTTCTAT+TGG + chr7_4:55283060-55283079 None:intergenic 45.0%
AAGAGAAAAGGCCTGCTACA+TGG - chr7_4:55283064-55283083 Msa1163870:intron 45.0%
AGAGAAAAGGCCTGCTACAT+GGG - chr7_4:55283065-55283084 Msa1163870:intron 45.0%
TGTTCCAGAAGACGTAGTTC+TGG - chr7_4:55283095-55283114 Msa1163870:intron 45.0%
TCATCCAGAACTACGTCTTC+TGG + chr7_4:55283102-55283121 None:intergenic 45.0%
GTAGAAACGTGATGGCACTA+TGG - chr7_4:55283392-55283411 Msa1163870:intron 45.0%
GGTAACTCAAGAGGATATGG+AGG - chr7_4:55283668-55283687 Msa1163870:intron 45.0%
! AAGAGGATATGGAGGCATAC+AGG - chr7_4:55283676-55283695 Msa1163870:intron 45.0%
TTCCTGAACTAAGCTTGGAG+AGG - chr7_4:55283737-55283756 Msa1163870:intron 45.0%
TAAGCTTGGAGAGGCCAAAA+AGG - chr7_4:55283746-55283765 Msa1163870:intron 45.0%
GAGAACATCACAAAGGCTTG+TGG + chr7_4:55283795-55283814 None:intergenic 45.0%
GCAGCTTGAGAACATCACAA+AGG + chr7_4:55283802-55283821 None:intergenic 45.0%
GAGAAACCTTAGGGTCACTA+AGG - chr7_4:55284016-55284035 Msa1163870:intron 45.0%
CATTTGCCTTAGTGACCCTA+AGG + chr7_4:55284025-55284044 None:intergenic 45.0%
ACGGCGAGGTTTAAATGAAC+TGG + chr7_4:55284289-55284308 None:intergenic 45.0%
!!! TATTTTTTATTTTTTTTGAA+GGG + chr7_4:55276288-55276307 None:intergenic 5.0%
!!! TTATTTTTTATTTTTTTTGA+AGG + chr7_4:55276289-55276308 None:intergenic 5.0%
!!! TTTATATATTTATTCAATTT+TGG - chr7_4:55276561-55276580 Msa1163870:three_prime_UTR 5.0%
!!! TAATATTTTTTTAAAAACAT+TGG - chr7_4:55277817-55277836 Msa1163870:CDS 5.0%
!!! GAAATTTAATAATTATTTTT+TGG + chr7_4:55284126-55284145 None:intergenic 5.0%
TTGCAGTGGCATTCAAGTCC+AGG - chr7_4:55276752-55276771 Msa1163870:three_prime_UTR 50.0%
TGCAGTGGCATTCAAGTCCA+GGG - chr7_4:55276753-55276772 Msa1163870:three_prime_UTR 50.0%
! CTGTTTTCGATGATCCTCCC+TGG + chr7_4:55276773-55276792 None:intergenic 50.0%
CTTGAGGAAGCTCGTAAAGC+CGG - chr7_4:55276799-55276818 Msa1163870:three_prime_UTR 50.0%
CCATCTTCATCAACCTCAGC+AGG + chr7_4:55276832-55276851 None:intergenic 50.0%
!! CCTGCTGAGGTTGATGAAGA+TGG - chr7_4:55276829-55276848 Msa1163870:three_prime_UTR 50.0%
GGCGCAGATGACATATACTG+AGG + chr7_4:55276877-55276896 None:intergenic 50.0%
!! ACTAAGTCAGGTGGGCTACA+TGG + chr7_4:55277182-55277201 None:intergenic 50.0%
ATGTAGCCCACCTGACTTAG+TGG - chr7_4:55277181-55277200 Msa1163870:intron 50.0%
TGTAGCCCACCTGACTTAGT+GGG - chr7_4:55277182-55277201 Msa1163870:intron 50.0%
GCTTATCCCACTAAGTCAGG+TGG + chr7_4:55277191-55277210 None:intergenic 50.0%
CCACTTAGTGGGAAAAGGCT+TGG + chr7_4:55277313-55277332 None:intergenic 50.0%
! CCAAGCCTTTTCCCACTAAG+TGG - chr7_4:55277310-55277329 Msa1163870:intron 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - chr7_4:55277316-55277335 Msa1163870:intron 50.0%
ATTGTCATGTGAGCTAGGGC+TGG - chr7_4:55277603-55277622 Msa1163870:CDS 50.0%
!! GTTACAACCGTGGGTTAGTG+TGG + chr7_4:55277672-55277691 None:intergenic 50.0%
GGCCTAGTAGTTACAACCGT+GGG + chr7_4:55277681-55277700 None:intergenic 50.0%
! ATCGGATAAGCCGGTTTCAC+GGG - chr7_4:55277745-55277764 Msa1163870:intron 50.0%
ATTGAACCCACCCGTGAAAC+CGG + chr7_4:55277758-55277777 None:intergenic 50.0%
! GTTTCACGGGTGGGTTCAAT+CGG - chr7_4:55277758-55277777 Msa1163870:intron 50.0%
CCCTATACATCAGCATGCCT+TGG + chr7_4:55278018-55278037 None:intergenic 50.0%
TAAATCTCACGACGTCGCCT+TGG + chr7_4:55278042-55278061 None:intergenic 50.0%
CGTCGGAGTGAAGTGATTGT+TGG - chr7_4:55279607-55279626 Msa1163870:CDS 50.0%
! CGGTTCGGCCCAACTTTATT+TGG + chr7_4:55279829-55279848 None:intergenic 50.0%
!! TGGACATGTACGGTTCGGTT+CGG + chr7_4:55279844-55279863 None:intergenic 50.0%
! TGGACTGGACATGTACGGTT+CGG + chr7_4:55279849-55279868 None:intergenic 50.0%
! CGGATTGGACTGGACATGTA+CGG + chr7_4:55279854-55279873 None:intergenic 50.0%
TGGGCCGGATATTACGGTTT+CGG - chr7_4:55279932-55279951 Msa1163870:intron 50.0%
! CAGGCCCAGAAGTATAGGAA+AGG - chr7_4:55280162-55280181 Msa1163870:intron 50.0%
TGGTCTTTCCATGCATGCCT+TGG + chr7_4:55281051-55281070 None:intergenic 50.0%
AGGCATGCATGGAAAGACCA+CGG - chr7_4:55281051-55281070 Msa1163870:intron 50.0%
TGCTTTGCTCCTACTTTCCG+TGG + chr7_4:55281071-55281090 None:intergenic 50.0%
ATGATGGCAAACGGGACAGA+TGG - chr7_4:55281144-55281163 Msa1163870:intron 50.0%
! ACTTCTTTCGAGCGTCGTCT+CGG + chr7_4:55281220-55281239 None:intergenic 50.0%
GAAGGGCGACCAAAATGATG+AGG - chr7_4:55281271-55281290 Msa1163870:intron 50.0%
!! TGAGGGTGCTGCAATTGATG+AGG - chr7_4:55281289-55281308 Msa1163870:intron 50.0%
CAGGAACCTACGTATTCGAG+AGG - chr7_4:55281553-55281572 Msa1163870:intron 50.0%
CACATTATGACCCCAAGACC+AGG - chr7_4:55281615-55281634 Msa1163870:intron 50.0%
TGGAAGAGGATCTTCACGCA+TGG + chr7_4:55281642-55281661 None:intergenic 50.0%
! TTTGGATCTGCCTCTGGAAG+AGG + chr7_4:55281656-55281675 None:intergenic 50.0%
TGTCAAATGCTTCCCAGGCA+TGG + chr7_4:55281859-55281878 None:intergenic 50.0%
!! TGCCTGGGAAGCATTTGACA+AGG - chr7_4:55281859-55281878 Msa1163870:intron 50.0%
!! GCCTGGGAAGCATTTGACAA+GGG - chr7_4:55281860-55281879 Msa1163870:intron 50.0%
TCCCTTGTCAAATGCTTCCC+AGG + chr7_4:55281864-55281883 None:intergenic 50.0%
TTCTTCTGGGTCAGAGTGAG+AGG - chr7_4:55282035-55282054 Msa1163870:intron 50.0%
ACGAGTACAGTACCAGGTAC+GGG + chr7_4:55282483-55282502 None:intergenic 50.0%
CCCCAGAAGCAAGTATGAAG+AGG - chr7_4:55282678-55282697 Msa1163870:intron 50.0%
ATGAGCCCCAAACAGTTGTG+TGG + chr7_4:55282720-55282739 None:intergenic 50.0%
! ACACAACTGTTTGGGGCTCA+TGG - chr7_4:55282719-55282738 Msa1163870:intron 50.0%
! ATGGTGGAAGGATCACCAGT+GGG - chr7_4:55282738-55282757 Msa1163870:intron 50.0%
GAGAAAAGGCCTGCTACATG+GGG - chr7_4:55283066-55283085 Msa1163870:intron 50.0%
ACATCAGTTCCCCATGTAGC+AGG + chr7_4:55283078-55283097 None:intergenic 50.0%
GCTTGCCGATGCACTCAAAA+AGG - chr7_4:55283128-55283147 Msa1163870:intron 50.0%
GATGTTCTCAAGCTGCCAAG+AGG - chr7_4:55283806-55283825 Msa1163870:CDS 50.0%
TCTCAAGCTGCCAAGAGGAA+TGG - chr7_4:55283811-55283830 Msa1163870:CDS 50.0%
CTCAAGCTGCCAAGAGGAAT+GGG - chr7_4:55283812-55283831 Msa1163870:CDS 50.0%
TACACTCTGCCCATTCCTCT+TGG + chr7_4:55283824-55283843 None:intergenic 50.0%
AGTGGCATTCAAGTCCAGGG+AGG - chr7_4:55276756-55276775 Msa1163870:three_prime_UTR 55.0%
AACCTCAGCAGGTGCAAGTC+CGG + chr7_4:55276821-55276840 None:intergenic 55.0%
CGACCCCACTTAGTGGGAAA+AGG + chr7_4:55277318-55277337 None:intergenic 55.0%
!! AAGCACCGACCCCACTTAGT+GGG + chr7_4:55277324-55277343 None:intergenic 55.0%
TGTGAGCTAGGGCTGGACAT+CGG - chr7_4:55277610-55277629 Msa1163870:CDS 55.0%
! GGTCGGTTTCGGTCGGAAAT+CGG - chr7_4:55277631-55277650 Msa1163870:intron 55.0%
CCTCAACCCACACTAACCCA+CGG - chr7_4:55277662-55277681 Msa1163870:intron 55.0%
GGGCCTAGTAGTTACAACCG+TGG + chr7_4:55277682-55277701 None:intergenic 55.0%
! GATAAGCCGGTTTCACGGGT+GGG - chr7_4:55277749-55277768 Msa1163870:intron 55.0%
! CGGTCGGTATTGGGTTTCGA+TGG - chr7_4:55279803-55279822 Msa1163870:intron 55.0%
GGGCCGGATATTACGGTTTC+GGG - chr7_4:55279933-55279952 Msa1163870:intron 55.0%
CCGCCCGAAACCGTAATATC+CGG + chr7_4:55279939-55279958 None:intergenic 55.0%
CCGGATATTACGGTTTCGGG+CGG - chr7_4:55279936-55279955 Msa1163870:intron 55.0%
GGCAAACGGGACAGATGGAA+TGG - chr7_4:55281149-55281168 Msa1163870:intron 55.0%
! CTTCTTTCGAGCGTCGTCTC+GGG + chr7_4:55281219-55281238 None:intergenic 55.0%
! GAGAAGCGTGTGCGAACAAC+AGG - chr7_4:55281386-55281405 Msa1163870:intron 55.0%
AAGCGTGTGCGAACAACAGG+CGG - chr7_4:55281389-55281408 Msa1163870:intron 55.0%
! GTGGGAGTACAGGAACTGTG+AGG - chr7_4:55281411-55281430 Msa1163870:intron 55.0%
! TCACGCATGGACCTGGTCTT+GGG + chr7_4:55281629-55281648 None:intergenic 55.0%
TTCACGCATGGACCTGGTCT+TGG + chr7_4:55281630-55281649 None:intergenic 55.0%
AGGATCTTCACGCATGGACC+TGG + chr7_4:55281636-55281655 None:intergenic 55.0%
GCGTGAAGATCCTCTTCCAG+AGG - chr7_4:55281643-55281662 Msa1163870:intron 55.0%
GTATGGCAATGCAGCTGACG+AGG - chr7_4:55281994-55282013 Msa1163870:intron 55.0%
! CAACTGTTTGGGGCTCATGG+TGG - chr7_4:55282722-55282741 Msa1163870:intron 55.0%
! TGTTTGGGGCTCATGGTGGA+AGG - chr7_4:55282726-55282745 Msa1163870:intron 55.0%
! CATGGTGGAAGGATCACCAG+TGG - chr7_4:55282737-55282756 Msa1163870:intron 55.0%
TGGTGGAAGGATCACCAGTG+GGG - chr7_4:55282739-55282758 Msa1163870:intron 55.0%
!! AGCTATTGCACTGGTGCTGC+TGG - chr7_4:55282793-55282812 Msa1163870:intron 55.0%
!! CACTGGTGCTGCTGGTATTG+AGG - chr7_4:55282801-55282820 Msa1163870:intron 55.0%
! TGCTGGTATTGAGGCTGCTG+AGG - chr7_4:55282810-55282829 Msa1163870:intron 55.0%
! ATAGAGGCGCAGCAGGGATA+TGG + chr7_4:55282902-55282921 None:intergenic 55.0%
GGCCTCTCCAAGCTTAGTTC+AGG + chr7_4:55283742-55283761 None:intergenic 55.0%
!! GAAGCACCGACCCCACTTAG+TGG + chr7_4:55277325-55277344 None:intergenic 60.0%
AGCTAGGGCTGGACATCGGT+CGG - chr7_4:55277614-55277633 Msa1163870:CDS 60.0%
! GGCTGGACATCGGTCGGTTT+CGG - chr7_4:55277620-55277639 Msa1163870:CDS 60.0%
! GGACATCGGTCGGTTTCGGT+CGG - chr7_4:55277624-55277643 Msa1163870:intron 60.0%
!! CCGTGGGTTAGTGTGGGTTG+AGG + chr7_4:55277665-55277684 None:intergenic 60.0%
! GGATAAGCCGGTTTCACGGG+TGG - chr7_4:55277748-55277767 Msa1163870:intron 60.0%
CACATGAAACCGAAGCGGGC+GGG + chr7_4:55279914-55279933 None:intergenic 60.0%
CCACATGAAACCGAAGCGGG+CGG + chr7_4:55279915-55279934 None:intergenic 60.0%
CGCCCGCTTCGGTTTCATGT+GGG - chr7_4:55279913-55279932 Msa1163870:intron 60.0%
GGCCCACATGAAACCGAAGC+GGG + chr7_4:55279918-55279937 None:intergenic 60.0%
CGGCCCACATGAAACCGAAG+CGG + chr7_4:55279919-55279938 None:intergenic 60.0%
CGCTTCGGTTTCATGTGGGC+CGG - chr7_4:55279917-55279936 Msa1163870:intron 60.0%
GTGTGCGAACAACAGGCGGT+GGG - chr7_4:55281393-55281412 Msa1163870:intron 60.0%
! ACAACAGGCGGTGGGAGTAC+AGG - chr7_4:55281401-55281420 Msa1163870:intron 60.0%
!! CACGCATGGACCTGGTCTTG+GGG + chr7_4:55281628-55281647 None:intergenic 60.0%
ATTGAGGCTGCTGAGGCTGC+AGG - chr7_4:55282817-55282836 Msa1163870:intron 60.0%
GCACGTAAGGAGTCTGCTGC+AGG - chr7_4:55282862-55282881 Msa1163870:intron 60.0%
! GAGGAGATAGAGGCGCAGCA+GGG + chr7_4:55282908-55282927 None:intergenic 60.0%
AGCGAGAAAGCGGGACAGAG+TGG - chr7_4:55283849-55283868 Msa1163870:CDS 60.0%
AGCCGGACTTGCACCTGCTG+AGG - chr7_4:55276816-55276835 Msa1163870:three_prime_UTR 65.0%
! ATGCGGGTTGTCGGGTCGCT+CGG + chr7_4:55279889-55279908 None:intergenic 65.0%
CCGCCCGCTTCGGTTTCATG+TGG - chr7_4:55279912-55279931 Msa1163870:intron 65.0%
CGTGTGCGAACAACAGGCGG+TGG - chr7_4:55281392-55281411 Msa1163870:intron 65.0%
! GGAGGAGATAGAGGCGCAGC+AGG + chr7_4:55282909-55282928 None:intergenic 65.0%
! TGCGGGTTGTCGGGTCGCTC+GGG + chr7_4:55279888-55279907 None:intergenic 70.0%
! GGCGGGTCATGCGGGTTGTC+GGG + chr7_4:55279897-55279916 None:intergenic 70.0%
! GGGCGGGTCATGCGGGTTGT+CGG + chr7_4:55279898-55279917 None:intergenic 70.0%
ACCGAAGCGGGCGGGTCATG+CGG + chr7_4:55279906-55279925 None:intergenic 70.0%
CCGAAGCGGGCGGGTCATGC+GGG + chr7_4:55279905-55279924 None:intergenic 75.0%
CCCGCATGACCCGCCCGCTT+CGG - chr7_4:55279902-55279921 Msa1163870:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 55276261 55284426 55276261 ID=Msa1163870;Name=Msa1163870
chr7_4 mRNA 55276261 55284426 55276261 ID=Msa1163870-mRNA-1;Parent=Msa1163870;Name=Msa1163870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=152|1|1|1|1|1|10|683|533
chr7_4 exon 55276261 55277018 55276261 ID=Msa1163870-mRNA-1:exon:16158;Parent=Msa1163870-mRNA-1
chr7_4 exon 55277107 55277175 55277107 ID=Msa1163870-mRNA-1:exon:16157;Parent=Msa1163870-mRNA-1
chr7_4 exon 55277538 55277641 55277538 ID=Msa1163870-mRNA-1:exon:16156;Parent=Msa1163870-mRNA-1
chr7_4 exon 55277804 55278020 55277804 ID=Msa1163870-mRNA-1:exon:16155;Parent=Msa1163870-mRNA-1
chr7_4 exon 55278588 55278887 55278588 ID=Msa1163870-mRNA-1:exon:16154;Parent=Msa1163870-mRNA-1
chr7_4 exon 55278996 55279131 55278996 ID=Msa1163870-mRNA-1:exon:16153;Parent=Msa1163870-mRNA-1
chr7_4 exon 55279255 55279662 55279255 ID=Msa1163870-mRNA-1:exon:16152;Parent=Msa1163870-mRNA-1
chr7_4 exon 55280491 55280603 55280491 ID=Msa1163870-mRNA-1:exon:16151;Parent=Msa1163870-mRNA-1
chr7_4 exon 55283766 55283929 55283766 ID=Msa1163870-mRNA-1:exon:16150;Parent=Msa1163870-mRNA-1
chr7_4 exon 55284259 55284426 55284259 ID=Msa1163870-mRNA-1:exon:16149;Parent=Msa1163870-mRNA-1
chr7_4 five_prime_UTR 55284275 55284426 55284275 ID=Msa1163870-mRNA-1:five_prime_utr;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55284259 55284274 55284259 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55283766 55283929 55283766 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55280491 55280603 55280491 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55279255 55279662 55279255 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55278996 55279131 55278996 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55278588 55278887 55278588 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55277804 55278020 55277804 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55277538 55277641 55277538 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55277107 55277175 55277107 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 CDS 55276944 55277018 55276944 ID=Msa1163870-mRNA-1:cds;Parent=Msa1163870-mRNA-1
chr7_4 three_prime_UTR 55276261 55276943 55276261 ID=Msa1163870-mRNA-1:three_prime_utr;Parent=Msa1163870-mRNA-1
Gene Sequence

>Msa1163870

ATGGCAACAGCTTCAGTGGCATTCAAGTCCAGGGAGGATCATCGAAAACAGATTGAGCTTGAGGAAGCTCGTAAAGCCGGACTTGCACCTGCTGAGGTTGATGAAGATGGCAAGGAAATCAATCCCCATATTCCTCAGTATATGTCATCTGCGCCTTGGTATCTTAATGCCGAGAGACCCAGTTTGAAACATCAAAGGAAATGGAAATCTGATCCCAACTACACCACATCATGGTACGATAGAGGTGCTAAAACTTTTCAGGCCCAGAAGTATAGGAAAGGTGCATGTGAGAACTGCGGAGCTATGACACATAATGCCAAGGCATGCATGGAAAGACCACGGAAAGTAGGAGCAAAGCATACAGACAAGCACATTGCTGCTGATGAAAAGGTAGAAACTTTTGAGCTTGACTATGATGGCAAACGGGACAGATGGAATGGTTATGATGCTTCAACATATGCTCGAGTCATTGAGAGATATGAAGCCCGAGACGACGCTCGAAAGAAGTTCTTGAAGGAACAACAGCTGAAGAGACTGGAGAAGGGCGACCAAAATGATGAGGGTGCTGCAATTGATGAGGCTGAAGATGAAGATGATTTAAGGGTAGACGAGGCAAAGGTTGATGAAAGCAAACAGATGGACTTTGCAAAGGTTGAGAAGCGTGTGCGAACAACAGGCGGTGGGAGTACAGGAACTGTGAGGAACCTACGTATTCGAGAGGATACTGCAAAATATCTTCTAAATCTTGATGTCAATTCTGCACATTATGACCCCAAGACCAGGTCCATGCGTGAAGATCCTCTTCCAGAGGCAGATCCAAATGAAAAGTTTTACTTGGGTGATAACCAATATAGAAGTAGTGGTCAAGCTTTGGAATTCAAGGACTTAAACATCCATGCCTGGGAAGCATTTGACAAGGGACAAGATGTTCACATGCAAGCGGCTCCTTCCCAAGCTGAATTACTCTATAAGAATTTCAAGGTCATGAAGGAGAAATTGAAGTCTCAAACAAAGGACACTATTATTGAGAAGTATGGCAATGCAGCTGACGAGGACAAACTTCCAAGAGAACTTCTTCTGGGTCAGAGTGAGAGGCAAGTTGAGTATGATCGTGCTGGTAGAATTGTTAAGGGACAGGAAGTCGCAATCCCCAGAAGCAAGTATGAAGAGGATGTTTACATCAACAACCACACAACTGTTTGGGGCTCATGGTGGAAGGATCACCAGTGGGGTTTTAAATGCTGCAAGCAGACAATACGTAATAGCTATTGCACTGGTGCTGCTGGTATTGAGGCTGCTGAGGCTGCAGGTGATCTTATGAGAGCTAATATTGCACGTAAGGAGTCTGCTGCAGAGGATCCTAAACCAATAGAAGAGAAAAGGCCTGCTACATGGGGAACTGATGTTCCAGAAGACGTAGTTCTGGATGAAAAATTGCTTGCCGATGCACTCAAAAAGGAGGATCAAAGAAAGAGAGAAGAGAAAGATGAGAGGAAGCGTAAATATAATGTCAGATGGAATGATCAGGTAACTCAAGAGGATATGGAGGCATACAGGATGAAGAAAGTACATCACGATGACCCAATGAAGAATTTTTCCTGA

Protein sequence

>Msa1163870

MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERPSLKHQRKWKSDPNYTTSWYDRGAKTFQAQKYRKGACENCGAMTHNAKACMERPRKVGAKHTDKHIAADEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDDARKKFLKEQQLKRLEKGDQNDEGAAIDEAEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPEADPNEKFYLGDNQYRSSGQALEFKDLNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTIIEKYGNAADEDKLPRELLLGQSERQVEYDRAGRIVKGQEVAIPRSKYEEDVYINNHTTVWGSWWKDHQWGFKCCKQTIRNSYCTGAAGIEAAEAAGDLMRANIARKESAAEDPKPIEEKRPATWGTDVPEDVVLDEKLLADALKKEDQRKREEKDERKRKYNVRWNDQVTQEDMEAYRMKKVHHDDPMKNFS*