AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0587030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587030 MtrunA17_Chr4g0003061 98.266 519 9 0 35 553 1 519 0.0 1050
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0587030 AT1G80460.1 77.969 522 112 1 35 553 1 522 0.0 833
Msa0587030 AT1G80460.2 71.839 522 104 2 35 553 1 482 0.0 772

Find 120 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTATTCCTTTCATTAA+AGG 0.184782 4_2:-8517422 None:intergenic
CAATAGACACTTGGTTGATT+TGG 0.226109 4_2:+8515794 Msa0587030:CDS
GATTCAATGCACAAAGATTC+TGG 0.239459 4_2:+8516489 Msa0587030:CDS
CCGGATTAGCTGTTGGGATT+TGG 0.260537 4_2:+8517169 Msa0587030:CDS
CTCTTCACAATGCTCTTGTT+TGG 0.272363 4_2:+8514515 Msa0587030:CDS
AGATCCTTCGAGTGCATAAT+TGG 0.272694 4_2:-8516205 None:intergenic
ATTATAGGCAATGTTTCTTC+TGG 0.283345 4_2:+8515979 Msa0587030:CDS
GCATGATCCAATGGAGATAT+TGG 0.330740 4_2:+8514354 Msa0587030:CDS
TCTTCTGGATGGCCAGTTGC+TGG 0.334542 4_2:+8515994 Msa0587030:CDS
GCACTGAAATATGTGCTAAT+AGG 0.336748 4_2:-8515694 None:intergenic
ATCAGTAATTCAGAAATTAT+AGG 0.336952 4_2:+8515964 Msa0587030:CDS
TTCGTACTACCTCTGTTTGC+AGG 0.343790 4_2:+8514545 Msa0587030:CDS
ATAAATACAATGTCTTGTTT+TGG 0.347961 4_2:+8513123 Msa0587030:exon
TAGGTTCATCAGCATTGTTC+GGG 0.358557 4_2:-8515872 None:intergenic
TATAGAGGCTCTGGCATTAG+AGG 0.360156 4_2:+8516296 Msa0587030:CDS
AAAGAGAGACTACTCTTGTT+TGG 0.360374 4_2:+8514473 Msa0587030:CDS
TTAGGTTCATCAGCATTGTT+CGG 0.360447 4_2:-8515873 None:intergenic
ATCCCAATCGCTGGATGTTT+AGG 0.365473 4_2:+8516018 Msa0587030:CDS
CTCTAATGGTTGAAGAAAAT+AGG 0.366750 4_2:+8517250 Msa0587030:CDS
CATTACCAAGGCAGTGGATA+AGG 0.374568 4_2:+8514393 Msa0587030:CDS
TTTGAAACTTCTGTGGTTGA+TGG 0.380869 4_2:+8515717 Msa0587030:CDS
GCATAATTGGTTGGAGCATT+CGG 0.386294 4_2:-8516192 None:intergenic
GGGGAGGCTAAAAGTACTTA+TGG 0.390080 4_2:+8516081 Msa0587030:CDS
TGGTTGATTTGGAACTTAAC+CGG 0.394053 4_2:+8515805 Msa0587030:CDS
GAAGGATCTGTTGCTATTGC+TGG 0.394891 4_2:+8516219 Msa0587030:CDS
CCAAATCCCAACAGCTAATC+CGG 0.396390 4_2:-8517169 None:intergenic
TGTTGGGCAGGCGGATTTGT+TGG 0.401082 4_2:+8517086 Msa0587030:intron
ATATTTGATGATTGAATTTG+TGG 0.412135 4_2:-8513156 None:intergenic
GATAAATCAGCTAAACCAAT+TGG 0.412511 4_2:+8513303 Msa0587030:CDS
TTGGACAAGCGTGCCGTAAA+GGG 0.413690 4_2:+8516061 Msa0587030:CDS
GACAAAGGATTGAAAGCTAT+TGG 0.414357 4_2:+8514439 Msa0587030:CDS
ATGCAGCCGGATTAGCTGTT+GGG 0.423707 4_2:+8517163 Msa0587030:CDS
TGCTAAAGATATAGAGGCTC+TGG 0.423985 4_2:+8516287 Msa0587030:CDS
ATCTGCTACTGCTTGTTCCT+TGG 0.424132 4_2:-8513269 None:intergenic
TGGGATTTGAAGTGCTTTCA+AGG 0.425709 4_2:-8515920 None:intergenic
AAGAGTAGTCTCTCTTTGAT+TGG 0.427095 4_2:-8514467 None:intergenic
CTTGGACAAGCGTGCCGTAA+AGG 0.431970 4_2:+8516060 Msa0587030:CDS
TGTTGCCTTATCCACTGCCT+TGG 0.460974 4_2:-8514398 None:intergenic
TCACAATGCTCTTGTTTGGA+TGG 0.461624 4_2:+8514519 Msa0587030:CDS
GATCAACATGCGGCAATGCT+TGG 0.462984 4_2:+8516042 Msa0587030:CDS
TACAAATGCTAAAGATATAG+AGG 0.466654 4_2:+8516281 Msa0587030:CDS
CACCTAAACATCCAGCGATT+GGG 0.469707 4_2:-8516020 None:intergenic
TTGAAACAGGAGACTGGAAA+AGG 0.470396 4_2:+8515627 Msa0587030:intron
TCAACTTGATGAGATCCAAT+TGG 0.485313 4_2:-8513318 None:intergenic
AGACTGGAAAAGGAGTTATC+TGG 0.485413 4_2:+8515637 Msa0587030:CDS
TTGCTGGAGCTGCTGTGCAG+TGG 0.487116 4_2:+8516235 Msa0587030:CDS
GGTAGATTCATCCCAGTTGA+GGG 0.489859 4_2:-8515899 None:intergenic
TCAACTATAGCTTATAAGCT+TGG 0.494881 4_2:+8516168 Msa0587030:CDS
GCTGTTGTTTCAATGTCAGC+TGG 0.495390 4_2:-8517126 None:intergenic
TAGGCAATGTTTCTTCTGGA+TGG 0.500957 4_2:+8515983 Msa0587030:CDS
ACACTCTCCAATATCTCCAT+TGG 0.503678 4_2:-8514361 None:intergenic
GCTAAAAGTACTTATGGTAC+AGG 0.511298 4_2:+8516087 Msa0587030:CDS
CTTCATATACAAAGGAATGA+AGG 0.511735 4_2:-8517489 None:intergenic
TACTTCGTTCCTGCCTTCAA+CGG 0.512729 4_2:+8516339 Msa0587030:CDS
TCACCTAAACATCCAGCGAT+TGG 0.515930 4_2:-8516021 None:intergenic
GACATTGAAACAACAGCACT+TGG 0.517787 4_2:+8517132 Msa0587030:CDS
GCGATTGGGATACCAGCAAC+TGG 0.520352 4_2:-8516006 None:intergenic
CAATCCTCCTTTCACTCCAC+CGG 0.520536 4_2:-8515824 None:intergenic
CGGAGCAAACAATCCGTTGA+AGG 0.521467 4_2:-8516352 None:intergenic
CCTTCGAGTGCATAATTGGT+TGG 0.522306 4_2:-8516201 None:intergenic
AACTTAACCGGTGGAGTGAA+AGG 0.522805 4_2:+8515817 Msa0587030:CDS
GCTTTCATTCTACTGAATAC+CGG 0.525684 4_2:+8516111 Msa0587030:CDS
AGGTAGATTCATCCCAGTTG+AGG 0.526716 4_2:-8515900 None:intergenic
CTTCTGTTCTTCATATACAA+AGG 0.527591 4_2:-8517497 None:intergenic
ATTCATAATTACCCTGCTTG+TGG 0.528009 4_2:-8513357 None:intergenic
CAGTGGCTTAGAGATGGTCT+TGG 0.532210 4_2:+8516252 Msa0587030:CDS
CTTGGAGCAGCCTATGCAGC+CGG 0.534264 4_2:+8517150 Msa0587030:CDS
ACTCAGTTCTATCCACAAGC+AGG 0.534411 4_2:+8513345 Msa0587030:CDS
GCATTGGTTCCTTTAATGAA+AGG 0.539079 4_2:+8517413 Msa0587030:three_prime_UTR
CAACCTCTTGATGCAGACTC+AGG 0.539217 4_2:+8516572 Msa0587030:CDS
GCAAACAATCCGTTGAAGGC+AGG 0.539309 4_2:-8516348 None:intergenic
AACGAAGTAAACACCACCAT+TGG 0.540620 4_2:-8516325 None:intergenic
GTGGATAAGGCAACAGCTGA+TGG 0.545692 4_2:+8514406 Msa0587030:CDS
GTTGCTGGTATCCCAATCGC+TGG 0.548254 4_2:+8516009 Msa0587030:CDS
GGTTTGCATTACCAAGGCAG+TGG 0.553429 4_2:+8514387 Msa0587030:CDS
TGATTTAACTACTCCTTCGC+CGG 0.553584 4_2:-8516130 None:intergenic
AACAGCTAATCCGGCTGCAT+AGG 0.557636 4_2:-8517160 None:intergenic
TCAGTGCTTTGAAACTTCTG+TGG 0.564226 4_2:+8515710 Msa0587030:CDS
TGTTTGGAACAATAGACACT+TGG 0.574976 4_2:+8515785 Msa0587030:CDS
TATGCAGCCGGATTAGCTGT+TGG 0.578831 4_2:+8517162 Msa0587030:CDS
TTCATTGGTGCAATTGACCA+AGG 0.579046 4_2:+8513252 Msa0587030:CDS
GCTGTGCAGTGGCTTAGAGA+TGG 0.579481 4_2:+8516246 Msa0587030:CDS
CTTGTTTGGAGCAAATCCAC+TGG 0.582009 4_2:+8514487 Msa0587030:CDS
TGGACAAGCGTGCCGTAAAG+GGG 0.584821 4_2:+8516062 Msa0587030:CDS
TTTCTTCAACCATTAGAGGA+CGG 0.587520 4_2:-8517245 None:intergenic
AAAACATATGCTCTCAAGCA+CGG 0.589815 4_2:-8516448 None:intergenic
AATAACAAGGTATACTAGCA+AGG 0.590541 4_2:+8516410 Msa0587030:CDS
ACGGATTGTTTGCTCCGTGG+TGG 0.592208 4_2:+8516358 Msa0587030:CDS
GGAAAATGTGGATGCTGTCA+AGG 0.594676 4_2:+8515738 Msa0587030:CDS
CAAACAAGAGCATTGTGAAG+AGG 0.598923 4_2:-8514514 None:intergenic
TCAACGGATTGTTTGCTCCG+TGG 0.599214 4_2:+8516355 Msa0587030:CDS
ATGGGTGGAGCATGATCCAA+TGG 0.600525 4_2:+8514345 Msa0587030:CDS
AAACCTGAGTCTGCATCAAG+AGG 0.602107 4_2:-8516575 None:intergenic
GGAGATATTGGAGAGTGTGA+AGG 0.603088 4_2:+8514366 Msa0587030:CDS
TATAAGCTATAGTTGACAGA+AGG 0.613391 4_2:-8516161 None:intergenic
CTCAGTTCTATCCACAAGCA+GGG 0.613869 4_2:+8513346 Msa0587030:CDS
GATGCTCGTGGGATTTGTAT+CGG 0.615161 4_2:+8516387 Msa0587030:CDS
TCTGTGGTTGATGGAAAATG+TGG 0.618354 4_2:+8515726 Msa0587030:CDS
CTATAGTTGACAGAAGGCCA+TGG 0.621798 4_2:-8516155 None:intergenic
GCATTAGAGGTAGAATCCAA+TGG 0.626496 4_2:+8516309 Msa0587030:CDS
ATTCTACTGAATACCGGCGA+AGG 0.627934 4_2:+8516117 Msa0587030:CDS
CTGGAAAAGGAGTTATCTGG+TGG 0.628620 4_2:+8515640 Msa0587030:CDS
TTGTTGATTTAACAGATGGG+TGG 0.628858 4_2:+8514330 Msa0587030:intron
GATGGATTCAATGTGGACAA+AGG 0.629833 4_2:+8514424 Msa0587030:CDS
TGTGAAGGTTTGCATTACCA+AGG 0.634692 4_2:+8514381 Msa0587030:CDS
CCAACCAATTATGCACTCGA+AGG 0.641638 4_2:+8516201 Msa0587030:CDS
TGGTGGCGTGATGATGCTCG+TGG 0.642857 4_2:+8516375 Msa0587030:CDS
GGAGTAGTTAAATCAAACCA+TGG 0.660899 4_2:+8516138 Msa0587030:CDS
GGTGGCGTGATGATGCTCGT+GGG 0.662938 4_2:+8516376 Msa0587030:CDS
ATTGTGAAGAGGAGCACCAG+TGG 0.665290 4_2:-8514503 None:intergenic
TGATGATTGAATTTGTGGTG+AGG 0.668438 4_2:-8513151 None:intergenic
ACAAGCGTGCCGTAAAGGGG+AGG 0.668849 4_2:+8516065 Msa0587030:CDS
CGAGCATCATCACGCCACCA+CGG 0.670243 4_2:-8516372 None:intergenic
AAAAGAGGACCTGCAAACAG+AGG 0.674216 4_2:-8514554 None:intergenic
TTGATTTGGAACTTAACCGG+TGG 0.677686 4_2:+8515808 Msa0587030:CDS
GGATTTGTATCGGAATAACA+AGG 0.684634 4_2:+8516397 Msa0587030:CDS
TTAACCGGTGGAGTGAAAGG+AGG 0.687751 4_2:+8515820 Msa0587030:CDS
ATGTTTAGGTGATCAACATG+CGG 0.705152 4_2:+8516032 Msa0587030:CDS
AACAGCTGATGGATTCAATG+TGG 0.722250 4_2:+8514417 Msa0587030:CDS
TTAGAGGTAGAATCCAATGG+TGG 0.726999 4_2:+8516312 Msa0587030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTGAAAATTTTGA+TGG + chr4_2:8513399-8513418 Msa0587030:intron 10.0%
!!! TTTTTATTGAAAATTTTGAT+GGG + chr4_2:8513400-8513419 Msa0587030:intron 10.0%
!! TCAATAAAAAAACAAAAAAG+AGG - chr4_2:8513390-8513409 None:intergenic 15.0%
!!! TTGTTGTGTTTTTATAATTA+TGG + chr4_2:8513424-8513443 Msa0587030:intron 15.0%
!!! TTTGTTGTATTTTGTAATTA+TGG + chr4_2:8513495-8513514 Msa0587030:intron 15.0%
!!! TATTTTGTTGAAAATATTGA+TGG + chr4_2:8514218-8514237 Msa0587030:intron 15.0%
!!! ATTTTGTTGAAAATATTGAT+GGG + chr4_2:8514219-8514238 Msa0587030:intron 15.0%
!! TTTACAATTAAAACAAAGAT+AGG - chr4_2:8514264-8514283 None:intergenic 15.0%
!!! ATTTTTATTATTCACAATGA+TGG - chr4_2:8515027-8515046 None:intergenic 15.0%
!! TTAAAAAGTGATCAATTTAA+GGG - chr4_2:8515164-8515183 None:intergenic 15.0%
!! TTTAAAAAGTGATCAATTTA+AGG - chr4_2:8515165-8515184 None:intergenic 15.0%
!! AAAGAGAAAAAGAAAAATAA+GGG + chr4_2:8516934-8516953 Msa0587030:intron 15.0%
!! ATATTTATTCCTTTCATTAA+AGG - chr4_2:8517425-8517444 None:intergenic 15.0%
!!! ATAAATACAATGTCTTGTTT+TGG + chr4_2:8513123-8513142 Msa0587030:exon 20.0%
!!! ATATTTGATGATTGAATTTG+TGG - chr4_2:8513159-8513178 None:intergenic 20.0%
!!! TTTTTGATTGCAAATTTTGA+TGG + chr4_2:8513554-8513573 Msa0587030:intron 20.0%
!!! TTTTGATTGCAAATTTTGAT+GGG + chr4_2:8513555-8513574 Msa0587030:intron 20.0%
!! TTGTAAATCTGATACATTAA+TGG - chr4_2:8513834-8513853 None:intergenic 20.0%
!! TTGACAATAATTTGAGAAAA+TGG + chr4_2:8514688-8514707 Msa0587030:intron 20.0%
!! CTTCAAATTAAATATGTATC+CGG - chr4_2:8514746-8514765 None:intergenic 20.0%
!!! TTTGAATCTTGTTTGATTAT+GGG + chr4_2:8515054-8515073 Msa0587030:intron 20.0%
!!! TATTAGTGAATATTTTTCCT+TGG - chr4_2:8515324-8515343 None:intergenic 20.0%
!! ATGATCTATATAATGAAATC+AGG - chr4_2:8515391-8515410 None:intergenic 20.0%
!!! GATGTTATTATTTTTGAAAC+AGG + chr4_2:8515614-8515633 Msa0587030:intron 20.0%
!!! TCTGAATTACTGATAATTTT+AGG - chr4_2:8515958-8515977 None:intergenic 20.0%
!! ATCAGTAATTCAGAAATTAT+AGG + chr4_2:8515964-8515983 Msa0587030:CDS 20.0%
!! TATCGAAAAGATAGAAAATA+TGG - chr4_2:8516649-8516668 None:intergenic 20.0%
!!! TTATTTTCTCAAGTAAAGAA+AGG - chr4_2:8516787-8516806 None:intergenic 20.0%
!! TGTTATATATACCAATATCA+AGG + chr4_2:8516831-8516850 Msa0587030:intron 20.0%
!! GTTATATATACCAATATCAA+GGG + chr4_2:8516832-8516851 Msa0587030:intron 20.0%
!!! AACAAAATAGTCTTAATAGA+GGG - chr4_2:8516887-8516906 None:intergenic 20.0%
!!! AAACAAAATAGTCTTAATAG+AGG - chr4_2:8516888-8516907 None:intergenic 20.0%
!!! TTTTCTTTTTCTCTTTGATT+GGG - chr4_2:8516930-8516949 None:intergenic 20.0%
!!! TTTTTCTTTTTCTCTTTGAT+TGG - chr4_2:8516931-8516950 None:intergenic 20.0%
!! CAAAGAGAAAAAGAAAAATA+AGG + chr4_2:8516933-8516952 Msa0587030:intron 20.0%
!!! AGAATTTTTGTTGATAATGT+TGG + chr4_2:8517069-8517088 Msa0587030:intron 20.0%
!!! GAATTTTTGTTGATAATGTT+GGG + chr4_2:8517070-8517089 Msa0587030:intron 20.0%
!!! ACACATTTTTATTTTAGCAT+TGG + chr4_2:8517397-8517416 Msa0587030:three_prime_UTR 20.0%
! TTTACGACAAAAACAAACAT+GGG - chr4_2:8513527-8513546 None:intergenic 25.0%
! TAAATTTGTCTTTCAGTAGT+CGG + chr4_2:8513686-8513705 Msa0587030:intron 25.0%
!! AACTATCGAAAGACAAATTT+TGG - chr4_2:8513882-8513901 None:intergenic 25.0%
!!! CTTTTGTTGAAAATTTTGAC+TGG + chr4_2:8514292-8514311 Msa0587030:intron 25.0%
!!! TTGTTTGTTGATTTAACAGA+TGG + chr4_2:8514326-8514345 Msa0587030:intron 25.0%
!!! TGTTTGTTGATTTAACAGAT+GGG + chr4_2:8514327-8514346 Msa0587030:intron 25.0%
! AGTAAGAAGAAGAATAAAAG+AGG - chr4_2:8514572-8514591 None:intergenic 25.0%
! ATGTTTCATTTGAGTAAACT+AGG + chr4_2:8514604-8514623 Msa0587030:intron 25.0%
! TTGATTTCTTGTAAGCAAAA+AGG + chr4_2:8514790-8514809 Msa0587030:intron 25.0%
!! GTTTGAATCTTGTTTGATTA+TGG + chr4_2:8515053-8515072 Msa0587030:intron 25.0%
! TTTATCCAAACATAGAGAAT+GGG - chr4_2:8515118-8515137 None:intergenic 25.0%
! ATTTATCCAAACATAGAGAA+TGG - chr4_2:8515119-8515138 None:intergenic 25.0%
! TTTATAGGTATGCTTAATCT+AGG + chr4_2:8515254-8515273 Msa0587030:intron 25.0%
! TGATACTCTCTTTATCTATA+AGG - chr4_2:8515299-8515318 None:intergenic 25.0%
!!! TTATAGATAAAGAGAGTATC+AGG + chr4_2:8515298-8515317 Msa0587030:intron 25.0%
! TCTATATAATGAAATCAGGA+GGG - chr4_2:8515387-8515406 None:intergenic 25.0%
! ATCTATATAATGAAATCAGG+AGG - chr4_2:8515388-8515407 None:intergenic 25.0%
! AAGAAAAAAGATGCATTGTT+TGG + chr4_2:8515769-8515788 Msa0587030:CDS 25.0%
! TACAAATGCTAAAGATATAG+AGG + chr4_2:8516281-8516300 Msa0587030:CDS 25.0%
! GAAAATATGGAACTAAATGA+AGG - chr4_2:8516636-8516655 None:intergenic 25.0%
! CAGAAAATGTTTATCTTGAT+AGG + chr4_2:8517004-8517023 Msa0587030:intron 25.0%
!!! TAGGTTGATACATATAAACT+TGG + chr4_2:8517023-8517042 Msa0587030:intron 25.0%
! GAAAAAGAAAGTAGATTGTT+GGG + chr4_2:8517272-8517291 Msa0587030:CDS 25.0%
! AAAAAGAAAGTAGATTGTTG+GGG + chr4_2:8517273-8517292 Msa0587030:CDS 25.0%
! TCGAAAGAAGATGTTTTCAT+TGG + chr4_2:8513237-8513256 Msa0587030:CDS 30.0%
GATAAATCAGCTAAACCAAT+TGG + chr4_2:8513303-8513322 Msa0587030:CDS 30.0%
TTACGACAAAAACAAACATG+GGG - chr4_2:8513526-8513545 None:intergenic 30.0%
CTTTACGACAAAAACAAACA+TGG - chr4_2:8513528-8513547 None:intergenic 30.0%
!!! CACTCCATTTTTGTTTTCAT+TGG + chr4_2:8513594-8513613 Msa0587030:intron 30.0%
CACTCCAATGAAAACAAAAA+TGG - chr4_2:8513601-8513620 None:intergenic 30.0%
!! TTTTGATTCTTGAATGTGTG+AGG + chr4_2:8513629-8513648 Msa0587030:intron 30.0%
TTAGGCATGTTTACATTCAT+GGG - chr4_2:8513669-8513688 None:intergenic 30.0%
TTTAGGCATGTTTACATTCA+TGG - chr4_2:8513670-8513689 None:intergenic 30.0%
GACTACTGAAAGACAAATTT+AGG - chr4_2:8513687-8513706 None:intergenic 30.0%
ACACAAACAAAACACATTTG+AGG - chr4_2:8513718-8513737 None:intergenic 30.0%
!!! CTTATGGATTTTGTTTTCGT+TGG + chr4_2:8513758-8513777 Msa0587030:intron 30.0%
ACTAACAATAGACACATTCA+AGG - chr4_2:8513913-8513932 None:intergenic 30.0%
GTGTCTATTGTTAGTTAGTT+CGG + chr4_2:8513918-8513937 Msa0587030:intron 30.0%
AATTACATACGCATCTTCAA+GGG - chr4_2:8513957-8513976 None:intergenic 30.0%
AAATTACATACGCATCTTCA+AGG - chr4_2:8513958-8513977 None:intergenic 30.0%
GTAATCCAATTGATACATTC+AGG + chr4_2:8514139-8514158 Msa0587030:intron 30.0%
ATAGTCCTGAATGTATCAAT+TGG - chr4_2:8514147-8514166 None:intergenic 30.0%
! TGTTGAAAATATTGATGGGT+CGG + chr4_2:8514223-8514242 Msa0587030:intron 30.0%
CTCAAATGAAACATCAATTC+AGG - chr4_2:8514598-8514617 None:intergenic 30.0%
GTAAACTAGGACAATTCATT+TGG + chr4_2:8514617-8514636 Msa0587030:intron 30.0%
ATATGACCATTGTAGGAAAT+GGG + chr4_2:8514820-8514839 Msa0587030:intron 30.0%
! AAAAGAAGATTGTGTTGCTA+GGG - chr4_2:8515081-8515100 None:intergenic 30.0%
! TAAAAGAAGATTGTGTTGCT+AGG - chr4_2:8515082-8515101 None:intergenic 30.0%
!! TTTTAAAGAACACATTGACG+TGG + chr4_2:8515178-8515197 Msa0587030:intron 30.0%
!!! AATTCTGTTTTTGAGGGATA+AGG + chr4_2:8515453-8515472 Msa0587030:intron 30.0%
TAACATCAACAACATTTCTG+AGG - chr4_2:8515601-8515620 None:intergenic 30.0%
!!! TTATTTTTGAAACAGGAGAC+TGG + chr4_2:8515621-8515640 Msa0587030:intron 30.0%
! TTTTAGGCAAAATTTCAGCT+GGG - chr4_2:8515942-8515961 None:intergenic 30.0%
! ATTTTAGGCAAAATTTCAGC+TGG - chr4_2:8515943-8515962 None:intergenic 30.0%
ATTATAGGCAATGTTTCTTC+TGG + chr4_2:8515979-8515998 Msa0587030:CDS 30.0%
TATAAGCTATAGTTGACAGA+AGG - chr4_2:8516164-8516183 None:intergenic 30.0%
TCAACTATAGCTTATAAGCT+TGG + chr4_2:8516168-8516187 Msa0587030:CDS 30.0%
AATAACAAGGTATACTAGCA+AGG + chr4_2:8516410-8516429 Msa0587030:CDS 30.0%
AAGCAAAAACTCATCTTTCT+TGG - chr4_2:8516526-8516545 None:intergenic 30.0%
! AGAAAGATGAGTTTTTGCTT+AGG + chr4_2:8516526-8516545 Msa0587030:CDS 30.0%
! GAAAGATGAGTTTTTGCTTA+GGG + chr4_2:8516527-8516546 Msa0587030:CDS 30.0%
GATATTGTTTAGCATAACCT+GGG + chr4_2:8516665-8516684 Msa0587030:intron 30.0%
TTAAGCTTGTAATCCAAACA+AGG - chr4_2:8516691-8516710 None:intergenic 30.0%
AAATTGGTTACACCAAAAGT+TGG - chr4_2:8516862-8516881 None:intergenic 30.0%
GTCTTAATAGAGGGTAAAAT+TGG - chr4_2:8516878-8516897 None:intergenic 30.0%
! CTATTTTCTTCAACCATTAG+AGG - chr4_2:8517252-8517271 None:intergenic 30.0%
CTCTAATGGTTGAAGAAAAT+AGG + chr4_2:8517250-8517269 Msa0587030:CDS 30.0%
GGAAAAAGAAAGTAGATTGT+TGG + chr4_2:8517271-8517290 Msa0587030:CDS 30.0%
! TTTTAATGTCATCTACTTCG+TGG + chr4_2:8517373-8517392 Msa0587030:three_prime_UTR 30.0%
CTTCATATACAAAGGAATGA+AGG - chr4_2:8517492-8517511 None:intergenic 30.0%
CTTCTGTTCTTCATATACAA+AGG - chr4_2:8517500-8517519 None:intergenic 30.0%
TGATGATTGAATTTGTGGTG+AGG - chr4_2:8513154-8513173 None:intergenic 35.0%
TCAACTTGATGAGATCCAAT+TGG - chr4_2:8513321-8513340 None:intergenic 35.0%
ATTCATAATTACCCTGCTTG+TGG - chr4_2:8513360-8513379 None:intergenic 35.0%
TACGACAAAAACAAACATGG+GGG - chr4_2:8513525-8513544 None:intergenic 35.0%
!! GATTGCAAATTTTGATGGGT+TGG + chr4_2:8513559-8513578 Msa0587030:intron 35.0%
!!! TTTTGATGGGTTGGTTAGTA+TGG + chr4_2:8513568-8513587 Msa0587030:intron 35.0%
TTGTGTAAAAGAGACACTTG+AGG + chr4_2:8513732-8513751 Msa0587030:intron 35.0%
!! TTTTGATTCTTGAATGCGTG+AGG + chr4_2:8513793-8513812 Msa0587030:intron 35.0%
!!! ATCTTCAAGGGTGTCTTTTA+TGG - chr4_2:8513945-8513964 None:intergenic 35.0%
CAACTGCAGTGTTTAAACAT+CGG - chr4_2:8514010-8514029 None:intergenic 35.0%
GCGGTTAAAATCAATATCTG+TGG + chr4_2:8514107-8514126 Msa0587030:intron 35.0%
! TATTGATGGGTCGGTAATTA+TGG + chr4_2:8514232-8514251 Msa0587030:intron 35.0%
!! TTGTTGATTTAACAGATGGG+TGG + chr4_2:8514330-8514349 Msa0587030:intron 35.0%
GACAAAGGATTGAAAGCTAT+TGG + chr4_2:8514439-8514458 Msa0587030:CDS 35.0%
AAGAGTAGTCTCTCTTTGAT+TGG - chr4_2:8514470-8514489 None:intergenic 35.0%
AAAGAGAGACTACTCTTGTT+TGG + chr4_2:8514473-8514492 Msa0587030:CDS 35.0%
CATGTACATATGACCATTGT+AGG + chr4_2:8514813-8514832 Msa0587030:intron 35.0%
CATATGACCATTGTAGGAAA+TGG + chr4_2:8514819-8514838 Msa0587030:intron 35.0%
ATCGTCTAATCTCTATCCAA+TGG + chr4_2:8514945-8514964 Msa0587030:intron 35.0%
AGCAAGAAATCCAATCTGAA+GGG + chr4_2:8514992-8515011 Msa0587030:intron 35.0%
! ATGCTTAATCTAGGACCAAT+TGG + chr4_2:8515263-8515282 Msa0587030:intron 35.0%
! TGCTTAATCTAGGACCAATT+GGG + chr4_2:8515264-8515283 Msa0587030:intron 35.0%
TCTTTATCTATAAGGCACGT+TGG - chr4_2:8515291-8515310 None:intergenic 35.0%
!! ACGAACTCATCGTTTTAATG+TGG + chr4_2:8515426-8515445 Msa0587030:intron 35.0%
!! AACTCATCGTTTTAATGTGG+TGG + chr4_2:8515429-8515448 Msa0587030:intron 35.0%
!!! TGGTGGTAATTCTGTTTTTG+AGG + chr4_2:8515446-8515465 Msa0587030:intron 35.0%
!!! GGTGGTAATTCTGTTTTTGA+GGG + chr4_2:8515447-8515466 Msa0587030:intron 35.0%
TAACATCAAAAGCTTAGCAC+TGG - chr4_2:8515525-8515544 None:intergenic 35.0%
! AGCTTTTGATGTTAGTTCCA+TGG + chr4_2:8515531-8515550 Msa0587030:intron 35.0%
GTTAGTTCCATGGTTGAAAT+TGG + chr4_2:8515541-8515560 Msa0587030:intron 35.0%
TAGTTCACCAATTTCAACCA+TGG - chr4_2:8515551-8515570 None:intergenic 35.0%
AGGATGACAAAAAGCAACAA+AGG - chr4_2:8515581-8515600 None:intergenic 35.0%
GCACTGAAATATGTGCTAAT+AGG - chr4_2:8515697-8515716 None:intergenic 35.0%
! TTTGAAACTTCTGTGGTTGA+TGG + chr4_2:8515717-8515736 Msa0587030:CDS 35.0%
! TGTTTGGAACAATAGACACT+TGG + chr4_2:8515785-8515804 Msa0587030:CDS 35.0%
CAATAGACACTTGGTTGATT+TGG + chr4_2:8515794-8515813 Msa0587030:CDS 35.0%
!! TGGTTGATTTGGAACTTAAC+CGG + chr4_2:8515805-8515824 Msa0587030:CDS 35.0%
TTAGGTTCATCAGCATTGTT+CGG - chr4_2:8515876-8515895 None:intergenic 35.0%
ATGTTTAGGTGATCAACATG+CGG + chr4_2:8516032-8516051 Msa0587030:CDS 35.0%
!! GCTAAAAGTACTTATGGTAC+AGG + chr4_2:8516087-8516106 Msa0587030:CDS 35.0%
GCTTTCATTCTACTGAATAC+CGG + chr4_2:8516111-8516130 Msa0587030:CDS 35.0%
GGAGTAGTTAAATCAAACCA+TGG + chr4_2:8516138-8516157 Msa0587030:CDS 35.0%
GGATTTGTATCGGAATAACA+AGG + chr4_2:8516397-8516416 Msa0587030:CDS 35.0%
AAAACATATGCTCTCAAGCA+CGG - chr4_2:8516451-8516470 None:intergenic 35.0%
GATTCAATGCACAAAGATTC+TGG + chr4_2:8516489-8516508 Msa0587030:CDS 35.0%
CGATATTGTTTAGCATAACC+TGG + chr4_2:8516664-8516683 Msa0587030:intron 35.0%
GTATGTAGATAAGCTCACAA+AGG + chr4_2:8516753-8516772 Msa0587030:intron 35.0%
! AGTTGGTATTCCCTTGATAT+TGG - chr4_2:8516845-8516864 None:intergenic 35.0%
! ATCAAGGGAATACCAACTTT+TGG + chr4_2:8516847-8516866 Msa0587030:intron 35.0%
CTCTTTGATTGGGTAAAGAA+GGG - chr4_2:8516920-8516939 None:intergenic 35.0%
TCTCTTTGATTGGGTAAAGA+AGG - chr4_2:8516921-8516940 None:intergenic 35.0%
!!! TTTTGTTGATAATGTTGGGC+AGG + chr4_2:8517074-8517093 Msa0587030:intron 35.0%
!! AGATTTCGTTTTCGATTCGA+AGG + chr4_2:8517197-8517216 Msa0587030:CDS 35.0%
TTTCTTCAACCATTAGAGGA+CGG - chr4_2:8517248-8517267 None:intergenic 35.0%
!! GCATTGGTTCCTTTAATGAA+AGG + chr4_2:8517413-8517432 Msa0587030:three_prime_UTR 35.0%
TTCATTGGTGCAATTGACCA+AGG + chr4_2:8513252-8513271 Msa0587030:CDS 40.0%
ACGACAAAAACAAACATGGG+GGG - chr4_2:8513524-8513543 None:intergenic 40.0%
TGTAAAAGAGACACTTGAGG+AGG + chr4_2:8513735-8513754 Msa0587030:intron 40.0%
ACATCGGATCTTTAACAGCA+GGG - chr4_2:8513994-8514013 None:intergenic 40.0%
AACATCGGATCTTTAACAGC+AGG - chr4_2:8513995-8514014 None:intergenic 40.0%
!! TTCACCCATCGATTTGAGAT+TGG + chr4_2:8514032-8514051 Msa0587030:intron 40.0%
CCAACCAATCTCAAATCGAT+GGG - chr4_2:8514039-8514058 None:intergenic 40.0%
ACCAACCAATCTCAAATCGA+TGG - chr4_2:8514040-8514059 None:intergenic 40.0%
TCGATCTTGAATCAATGGTC+GGG - chr4_2:8514087-8514106 None:intergenic 40.0%
CTCGATCTTGAATCAATGGT+CGG - chr4_2:8514088-8514107 None:intergenic 40.0%
!! ACCATTGATTCAAGATCGAG+CGG + chr4_2:8514088-8514107 Msa0587030:intron 40.0%
GCATGATCCAATGGAGATAT+TGG + chr4_2:8514354-8514373 Msa0587030:CDS 40.0%
ACACTCTCCAATATCTCCAT+TGG - chr4_2:8514364-8514383 None:intergenic 40.0%
TGTGAAGGTTTGCATTACCA+AGG + chr4_2:8514381-8514400 Msa0587030:CDS 40.0%
!! AACAGCTGATGGATTCAATG+TGG + chr4_2:8514417-8514436 Msa0587030:CDS 40.0%
! GATGGATTCAATGTGGACAA+AGG + chr4_2:8514424-8514443 Msa0587030:CDS 40.0%
!! CAAACAAGAGCATTGTGAAG+AGG - chr4_2:8514517-8514536 None:intergenic 40.0%
CTCTTCACAATGCTCTTGTT+TGG + chr4_2:8514515-8514534 Msa0587030:CDS 40.0%
! TCACAATGCTCTTGTTTGGA+TGG + chr4_2:8514519-8514538 Msa0587030:CDS 40.0%
CTAGGACAATTCATTTGGCT+AGG + chr4_2:8514622-8514641 Msa0587030:intron 40.0%
TATCCACATGTGTCAAACAC+CGG + chr4_2:8514724-8514743 Msa0587030:intron 40.0%
AAGTATCTGTGCTACATAGC+TGG + chr4_2:8514763-8514782 Msa0587030:intron 40.0%
AGTATCTGTGCTACATAGCT+GGG + chr4_2:8514764-8514783 Msa0587030:intron 40.0%
AACGACTCTGTACTGAATGT+TGG - chr4_2:8514856-8514875 None:intergenic 40.0%
AGATCAGACAGTTGAGATTC+TGG + chr4_2:8514893-8514912 Msa0587030:intron 40.0%
GATCAGACAGTTGAGATTCT+GGG + chr4_2:8514894-8514913 Msa0587030:intron 40.0%
CAGCAAGAAATCCAATCTGA+AGG + chr4_2:8514991-8515010 Msa0587030:intron 40.0%
AATCCAATCTGAAGGGAATC+TGG + chr4_2:8514999-8515018 Msa0587030:intron 40.0%
ATCCAATCTGAAGGGAATCT+GGG + chr4_2:8515000-8515019 Msa0587030:intron 40.0%
CTTTGCCCATTCTCTATGTT+TGG + chr4_2:8515110-8515129 Msa0587030:intron 40.0%
CATTGACGTGGTGAAAAAGA+AGG + chr4_2:8515190-8515209 Msa0587030:intron 40.0%
!! ATAAAGAGAGTATCAGGCCA+AGG + chr4_2:8515304-8515323 Msa0587030:intron 40.0%
TTGAAACAGGAGACTGGAAA+AGG + chr4_2:8515627-8515646 Msa0587030:intron 40.0%
AGACTGGAAAAGGAGTTATC+TGG + chr4_2:8515637-8515656 Msa0587030:CDS 40.0%
! ACACATTTTGTAGAGAGCTG+TGG + chr4_2:8515667-8515686 Msa0587030:CDS 40.0%
!! TCAGTGCTTTGAAACTTCTG+TGG + chr4_2:8515710-8515729 Msa0587030:CDS 40.0%
!! TCTGTGGTTGATGGAAAATG+TGG + chr4_2:8515726-8515745 Msa0587030:CDS 40.0%
!! TTGATTTGGAACTTAACCGG+TGG + chr4_2:8515808-8515827 Msa0587030:CDS 40.0%
TAGGTTCATCAGCATTGTTC+GGG - chr4_2:8515875-8515894 None:intergenic 40.0%
TGAACCTAAAAACCCTCAAC+TGG + chr4_2:8515887-8515906 Msa0587030:CDS 40.0%
GAACCTAAAAACCCTCAACT+GGG + chr4_2:8515888-8515907 Msa0587030:CDS 40.0%
! TGGGATTTGAAGTGCTTTCA+AGG - chr4_2:8515923-8515942 None:intergenic 40.0%
TAGGCAATGTTTCTTCTGGA+TGG + chr4_2:8515983-8516002 Msa0587030:CDS 40.0%
! TACTTTTAGCCTCCCCTTTA+CGG - chr4_2:8516077-8516096 None:intergenic 40.0%
TGATTTAACTACTCCTTCGC+CGG - chr4_2:8516133-8516152 None:intergenic 40.0%
! GCATAATTGGTTGGAGCATT+CGG - chr4_2:8516195-8516214 None:intergenic 40.0%
AGATCCTTCGAGTGCATAAT+TGG - chr4_2:8516208-8516227 None:intergenic 40.0%
TGCTAAAGATATAGAGGCTC+TGG + chr4_2:8516287-8516306 Msa0587030:CDS 40.0%
GCATTAGAGGTAGAATCCAA+TGG + chr4_2:8516309-8516328 Msa0587030:CDS 40.0%
TTAGAGGTAGAATCCAATGG+TGG + chr4_2:8516312-8516331 Msa0587030:CDS 40.0%
AACGAAGTAAACACCACCAT+TGG - chr4_2:8516328-8516347 None:intergenic 40.0%
! GAGTTTTTGCTTAGGGTTGA+TGG + chr4_2:8516534-8516553 Msa0587030:CDS 40.0%
!!! TTTTTGCTTAGGGTTGATGG+TGG + chr4_2:8516537-8516556 Msa0587030:CDS 40.0%
GCAGACAAGTACTAACATGT+CGG - chr4_2:8516979-8516998 None:intergenic 40.0%
GACATTGAAACAACAGCACT+TGG + chr4_2:8517132-8517151 Msa0587030:CDS 40.0%
! TAGTGTTTTCCGTCCTCTAA+TGG + chr4_2:8517236-8517255 Msa0587030:CDS 40.0%
ATCTGCTACTGCTTGTTCCT+TGG - chr4_2:8513272-8513291 None:intergenic 45.0%
ACTCAGTTCTATCCACAAGC+AGG + chr4_2:8513345-8513364 Msa0587030:CDS 45.0%
CTCAGTTCTATCCACAAGCA+GGG + chr4_2:8513346-8513365 Msa0587030:CDS 45.0%
! TCTTTAACAGCAGGGCATCT+AGG - chr4_2:8513986-8514005 None:intergenic 45.0%
!! CCCATCGATTTGAGATTGGT+TGG + chr4_2:8514036-8514055 Msa0587030:intron 45.0%
ACCGCTCGATCTTGAATCAA+TGG - chr4_2:8514092-8514111 None:intergenic 45.0%
! GGAGATATTGGAGAGTGTGA+AGG + chr4_2:8514366-8514385 Msa0587030:CDS 45.0%
CATTACCAAGGCAGTGGATA+AGG + chr4_2:8514393-8514412 Msa0587030:CDS 45.0%
! CTTGTTTGGAGCAAATCCAC+TGG + chr4_2:8514487-8514506 Msa0587030:CDS 45.0%
TTCGTACTACCTCTGTTTGC+AGG + chr4_2:8514545-8514564 Msa0587030:CDS 45.0%
AAAAGAGGACCTGCAAACAG+AGG - chr4_2:8514557-8514576 None:intergenic 45.0%
TATCCGGTGTTTGACACATG+TGG - chr4_2:8514730-8514749 None:intergenic 45.0%
GAGGAACCCATTTCCTACAA+TGG - chr4_2:8514829-8514848 None:intergenic 45.0%
AGTCAGCGTTTCTAAGCCAT+TGG - chr4_2:8514964-8514983 None:intergenic 45.0%
CTGGAAAAGGAGTTATCTGG+TGG + chr4_2:8515640-8515659 Msa0587030:CDS 45.0%
GGAAAATGTGGATGCTGTCA+AGG + chr4_2:8515738-8515757 Msa0587030:CDS 45.0%
AACTTAACCGGTGGAGTGAA+AGG + chr4_2:8515817-8515836 Msa0587030:CDS 45.0%
! CATCCCAGTTGAGGGTTTTT+AGG - chr4_2:8515894-8515913 None:intergenic 45.0%
GGTAGATTCATCCCAGTTGA+GGG - chr4_2:8515902-8515921 None:intergenic 45.0%
AGGTAGATTCATCCCAGTTG+AGG - chr4_2:8515903-8515922 None:intergenic 45.0%
ATCCCAATCGCTGGATGTTT+AGG + chr4_2:8516018-8516037 Msa0587030:CDS 45.0%
CACCTAAACATCCAGCGATT+GGG - chr4_2:8516023-8516042 None:intergenic 45.0%
TCACCTAAACATCCAGCGAT+TGG - chr4_2:8516024-8516043 None:intergenic 45.0%
!! GGGGAGGCTAAAAGTACTTA+TGG + chr4_2:8516081-8516100 Msa0587030:CDS 45.0%
ATTCTACTGAATACCGGCGA+AGG + chr4_2:8516117-8516136 Msa0587030:CDS 45.0%
CTATAGTTGACAGAAGGCCA+TGG - chr4_2:8516158-8516177 None:intergenic 45.0%
CCTTCGAGTGCATAATTGGT+TGG - chr4_2:8516204-8516223 None:intergenic 45.0%
CCAACCAATTATGCACTCGA+AGG + chr4_2:8516201-8516220 Msa0587030:CDS 45.0%
! GAAGGATCTGTTGCTATTGC+TGG + chr4_2:8516219-8516238 Msa0587030:CDS 45.0%
! TATAGAGGCTCTGGCATTAG+AGG + chr4_2:8516296-8516315 Msa0587030:CDS 45.0%
TACTTCGTTCCTGCCTTCAA+CGG + chr4_2:8516339-8516358 Msa0587030:CDS 45.0%
GATGCTCGTGGGATTTGTAT+CGG + chr4_2:8516387-8516406 Msa0587030:CDS 45.0%
AAACCTGAGTCTGCATCAAG+AGG - chr4_2:8516578-8516597 None:intergenic 45.0%
TCTTGATGCAGACTCAGGTT+TGG + chr4_2:8516577-8516596 Msa0587030:intron 45.0%
TTGTAATCCAAACAAGGCCC+AGG - chr4_2:8516685-8516704 None:intergenic 45.0%
!! TGTTGATAATGTTGGGCAGG+CGG + chr4_2:8517077-8517096 Msa0587030:intron 45.0%
!! GCTGTTGTTTCAATGTCAGC+TGG - chr4_2:8517129-8517148 None:intergenic 45.0%
CCAAATCCCAACAGCTAATC+CGG - chr4_2:8517172-8517191 None:intergenic 45.0%
!!! TATTCATAATTTTTTTTTAT+AGG + chr4_2:8515239-8515258 Msa0587030:intron 5.0%
GAGACACTTGAGGAGGCTTA+TGG + chr4_2:8513742-8513761 Msa0587030:intron 50.0%
ATGGGTGGAGCATGATCCAA+TGG + chr4_2:8514345-8514364 Msa0587030:CDS 50.0%
GGTTTGCATTACCAAGGCAG+TGG + chr4_2:8514387-8514406 Msa0587030:CDS 50.0%
TGTTGCCTTATCCACTGCCT+TGG - chr4_2:8514401-8514420 None:intergenic 50.0%
GTGGATAAGGCAACAGCTGA+TGG + chr4_2:8514406-8514425 Msa0587030:CDS 50.0%
!! ATTGTGAAGAGGAGCACCAG+TGG - chr4_2:8514506-8514525 None:intergenic 50.0%
! TGTAGGAAATGGGTTCCTCG+TGG + chr4_2:8514830-8514849 Msa0587030:intron 50.0%
TGTACTGAATGTTGGCCACG+AGG - chr4_2:8514848-8514867 None:intergenic 50.0%
GACCCAGATTCCCTTCAGAT+TGG - chr4_2:8515005-8515024 None:intergenic 50.0%
TAAGGCACGTTGGACCCAAT+TGG - chr4_2:8515281-8515300 None:intergenic 50.0%
TTAACCGGTGGAGTGAAAGG+AGG + chr4_2:8515820-8515839 Msa0587030:CDS 50.0%
CAATCCTCCTTTCACTCCAC+CGG - chr4_2:8515827-8515846 None:intergenic 50.0%
GATCAACATGCGGCAATGCT+TGG + chr4_2:8516042-8516061 Msa0587030:CDS 50.0%
TTGGACAAGCGTGCCGTAAA+GGG + chr4_2:8516061-8516080 Msa0587030:CDS 50.0%
CAGTGGCTTAGAGATGGTCT+TGG + chr4_2:8516252-8516271 Msa0587030:CDS 50.0%
GCAAACAATCCGTTGAAGGC+AGG - chr4_2:8516351-8516370 None:intergenic 50.0%
CGGAGCAAACAATCCGTTGA+AGG - chr4_2:8516355-8516374 None:intergenic 50.0%
!! TCAACGGATTGTTTGCTCCG+TGG + chr4_2:8516355-8516374 Msa0587030:CDS 50.0%
CAACCTCTTGATGCAGACTC+AGG + chr4_2:8516572-8516591 Msa0587030:CDS 50.0%
!! AGCATAACCTGGGCCTTGTT+TGG + chr4_2:8516675-8516694 Msa0587030:intron 50.0%
AACAGCTAATCCGGCTGCAT+AGG - chr4_2:8517163-8517182 None:intergenic 50.0%
!! TATGCAGCCGGATTAGCTGT+TGG + chr4_2:8517162-8517181 Msa0587030:CDS 50.0%
!! ATGCAGCCGGATTAGCTGTT+GGG + chr4_2:8517163-8517182 Msa0587030:CDS 50.0%
!! CCGGATTAGCTGTTGGGATT+TGG + chr4_2:8517169-8517188 Msa0587030:CDS 50.0%
TCTTCTGGATGGCCAGTTGC+TGG + chr4_2:8515994-8516013 Msa0587030:CDS 55.0%
GCGATTGGGATACCAGCAAC+TGG - chr4_2:8516009-8516028 None:intergenic 55.0%
GTTGCTGGTATCCCAATCGC+TGG + chr4_2:8516009-8516028 Msa0587030:CDS 55.0%
CTTGGACAAGCGTGCCGTAA+AGG + chr4_2:8516060-8516079 Msa0587030:CDS 55.0%
TGGACAAGCGTGCCGTAAAG+GGG + chr4_2:8516062-8516081 Msa0587030:CDS 55.0%
GCTGTGCAGTGGCTTAGAGA+TGG + chr4_2:8516246-8516265 Msa0587030:CDS 55.0%
! ACGGATTGTTTGCTCCGTGG+TGG + chr4_2:8516358-8516377 Msa0587030:CDS 55.0%
! TGTTGGGCAGGCGGATTTGT+TGG + chr4_2:8517086-8517105 Msa0587030:intron 55.0%
ACAAGCGTGCCGTAAAGGGG+AGG + chr4_2:8516065-8516084 Msa0587030:CDS 60.0%
TTGCTGGAGCTGCTGTGCAG+TGG + chr4_2:8516235-8516254 Msa0587030:CDS 60.0%
CGAGCATCATCACGCCACCA+CGG - chr4_2:8516375-8516394 None:intergenic 60.0%
! TGGTGGCGTGATGATGCTCG+TGG + chr4_2:8516375-8516394 Msa0587030:CDS 60.0%
! GGTGGCGTGATGATGCTCGT+GGG + chr4_2:8516376-8516395 Msa0587030:CDS 60.0%
CTTGGAGCAGCCTATGCAGC+CGG + chr4_2:8517150-8517169 Msa0587030:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 8513096 8517568 8513096 ID=Msa0587030;Name=Msa0587030
chr4_2 mRNA 8513096 8517568 8513096 ID=Msa0587030-mRNA-1;Parent=Msa0587030;Name=Msa0587030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=36|1|1|1|1|1|4|227|553
chr4_2 exon 8513096 8513367 8513096 ID=Msa0587030-mRNA-1:exon:2272;Parent=Msa0587030-mRNA-1
chr4_2 exon 8514345 8514566 8514345 ID=Msa0587030-mRNA-1:exon:2273;Parent=Msa0587030-mRNA-1
chr4_2 exon 8515636 8516593 8515636 ID=Msa0587030-mRNA-1:exon:2274;Parent=Msa0587030-mRNA-1
chr4_2 exon 8517096 8517568 8517096 ID=Msa0587030-mRNA-1:exon:2275;Parent=Msa0587030-mRNA-1
chr4_2 five_prime_UTR 8513096 8513131 8513096 ID=Msa0587030-mRNA-1:five_prime_utr;Parent=Msa0587030-mRNA-1
chr4_2 CDS 8513132 8513367 8513132 ID=Msa0587030-mRNA-1:cds;Parent=Msa0587030-mRNA-1
chr4_2 CDS 8514345 8514566 8514345 ID=Msa0587030-mRNA-1:cds;Parent=Msa0587030-mRNA-1
chr4_2 CDS 8515636 8516593 8515636 ID=Msa0587030-mRNA-1:cds;Parent=Msa0587030-mRNA-1
chr4_2 CDS 8517096 8517341 8517096 ID=Msa0587030-mRNA-1:cds;Parent=Msa0587030-mRNA-1
chr4_2 three_prime_UTR 8517342 8517568 8517342 ID=Msa0587030-mRNA-1:three_prime_utr;Parent=Msa0587030-mRNA-1
Gene Sequence

>Msa0587030

ATGTCTTGTTTTGGTTCATCCTCACCACAAATTCAATCATCAAATATCACAAATAAATACAACATCATCGTATTGTTGTGTCTCAAGAAGAACAAGACAAACATGTCGAAAGAAGATGTTTTCATTGGTGCAATTGACCAAGGAACAAGCAGTAGCAGATTCATAATATATGATAAATCAGCTAAACCAATTGGATCTCATCAAGTTGAATTCACTCAGTTCTATCCACAAGCAGGATGGGTGGAGCATGATCCAATGGAGATATTGGAGAGTGTGAAGGTTTGCATTACCAAGGCAGTGGATAAGGCAACAGCTGATGGATTCAATGTGGACAAAGGATTGAAAGCTATTGGTCTCACCAATCAAAGAGAGACTACTCTTGTTTGGAGCAAATCCACTGGTGCTCCTCTTCACAATGCTCTTGTTTGGATGGACGTTCGTACTACCTCTGTTTGCAGGAGACTGGAAAAGGAGTTATCTGGTGGTAGAACACATTTTGTAGAGAGCTGTGGTTTGCCTATTAGCACATATTTCAGTGCTTTGAAACTTCTGTGGTTGATGGAAAATGTGGATGCTGTCAAGGAAGCTATTAAGAAAAAAGATGCATTGTTTGGAACAATAGACACTTGGTTGATTTGGAACTTAACCGGTGGAGTGAAAGGAGGATTGCACGTCACTGATGCTTCAAATGCATCCCGAACAATGCTGATGAACCTAAAAACCCTCAACTGGGATGAATCTACCTTGAAAGCACTTCAAATCCCAGCTGAAATTTTGCCTAAAATTATCAGTAATTCAGAAATTATAGGCAATGTTTCTTCTGGATGGCCAGTTGCTGGTATCCCAATCGCTGGATGTTTAGGTGATCAACATGCGGCAATGCTTGGACAAGCGTGCCGTAAAGGGGAGGCTAAAAGTACTTATGGTACAGGTGCTTTCATTCTACTGAATACCGGCGAAGGAGTAGTTAAATCAAACCATGGCCTTCTGTCAACTATAGCTTATAAGCTTGGTCCGAATGCTCCAACCAATTATGCACTCGAAGGATCTGTTGCTATTGCTGGAGCTGCTGTGCAGTGGCTTAGAGATGGTCTTGGTCTCATTACAAATGCTAAAGATATAGAGGCTCTGGCATTAGAGGTAGAATCCAATGGTGGTGTTTACTTCGTTCCTGCCTTCAACGGATTGTTTGCTCCGTGGTGGCGTGATGATGCTCGTGGGATTTGTATCGGAATAACAAGGTATACTAGCAAGGCTCACATTGCTAGAGCCGTGCTTGAGAGCATATGTTTTCAAGTAAAAGATGTTATTGATTCAATGCACAAAGATTCTGGAGCAGATCAATCCAAGAAAGATGAGTTTTTGCTTAGGGTTGATGGTGGTGCAACTGTTAACAACCTCTTGATGCAGACTCAGGCGGATTTGTTGGCAACTTCAGTAATTAGACCAGCTGACATTGAAACAACAGCACTTGGAGCAGCCTATGCAGCCGGATTAGCTGTTGGGATTTGGAAAGAAGATTTCGTTTTCGATTCGAAGGACATGCTGAAGAATGCTAGTGTTTTCCGTCCTCTAATGGTTGAAGAAAATAGGAAAAAGAAAGTAGATTGTTGGGGAAAAGCTGTTAGTAGATCTTTTGACTTAGCAGATCTTTCTCTTTGA

Protein sequence

>Msa0587030

MSCFGSSSPQIQSSNITNKYNIIVLLCLKKNKTNMSKEDVFIGAIDQGTSSSRFIIYDKSAKPIGSHQVEFTQFYPQAGWVEHDPMEILESVKVCITKAVDKATADGFNVDKGLKAIGLTNQRETTLVWSKSTGAPLHNALVWMDVRTTSVCRRLEKELSGGRTHFVESCGLPISTYFSALKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDASNASRTMLMNLKTLNWDESTLKALQIPAEILPKIISNSEIIGNVSSGWPVAGIPIAGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEGVVKSNHGLLSTIAYKLGPNAPTNYALEGSVAIAGAAVQWLRDGLGLITNAKDIEALALEVESNGGVYFVPAFNGLFAPWWRDDARGICIGITRYTSKAHIARAVLESICFQVKDVIDSMHKDSGADQSKKDEFLLRVDGGATVNNLLMQTQADLLATSVIRPADIETTALGAAYAAGLAVGIWKEDFVFDSKDMLKNASVFRPLMVEENRKKKVDCWGKAVSRSFDLADLSL*