AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0503580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0503580 MtrunA17_Chr3g0102001 68.999 729 154 7 5 662 5 732 0.0 951
Msa0503580 MtrunA17_Chr5g0439061 46.058 723 299 14 21 665 21 730 0.0 553
Msa0503580 MtrunA17_Chr3g0098541 63.305 357 71 7 50 347 3 358 3.54e-145 426
Msa0503580 MtrunA17_Chr2g0286601 35.489 696 373 14 18 661 4 675 4.36e-120 373
Msa0503580 MtrunA17_Chr2g0286551 36.041 677 372 15 19 661 5 654 7.48e-111 348
Msa0503580 MtrunA17_Chr3g0098481 46.688 317 158 4 354 664 19 330 2.60e-90 284
Msa0503580 MtrunA17_Chr5g0439071 35.294 544 242 11 21 476 21 542 8.25e-84 274
Msa0503580 MtrunA17_Chr3g0098531 47.703 283 138 4 388 665 6 283 1.03e-81 260
Msa0503580 MtrunA17_Chr3g0098301 45.574 305 155 4 367 665 98 397 9.17e-77 251
Msa0503580 MtrunA17_Chr5g0439051 64.706 187 65 1 476 662 20 205 5.52e-73 234
Msa0503580 MtrunA17_Chr5g0439081 54.737 190 84 1 476 665 16 203 3.95e-64 211
Msa0503580 MtrunA17_Chr3g0098291 53.846 208 90 5 27 231 31 235 8.23e-61 203
Msa0503580 MtrunA17_Chr2g0284501 30.236 635 395 16 50 661 41 650 2.18e-57 206
Msa0503580 MtrunA17_Chr5g0443001 26.094 640 388 11 28 662 39 598 2.59e-53 193
Msa0503580 MtrunA17_Chr2g0286561 46.939 196 104 0 466 661 5 200 1.11e-51 178
Msa0503580 MtrunA17_Chr5g0439021 54.037 161 73 1 21 180 21 181 1.67e-51 176
Msa0503580 MtrunA17_Chr5g0410341 27.541 679 394 23 23 663 123 741 6.09e-49 183
Msa0503580 MtrunA17_Chr6g0456101 26.475 661 401 18 18 658 136 731 7.71e-48 180
Msa0503580 MtrunA17_Chr6g0457101 25.891 645 382 17 29 661 121 681 9.28e-48 179
Msa0503580 MtrunA17_Chr2g0297491 35.906 298 174 7 371 662 88 374 7.97e-45 165
Msa0503580 MtrunA17_Chr3g0098491 51.282 156 67 3 28 180 1 150 1.36e-44 156
Msa0503580 MtrunA17_Chr3g0098521 50.968 155 73 2 28 182 1 152 4.39e-44 155
Msa0503580 MtrunA17_Chr2g0297481 34.228 298 175 7 371 662 186 468 1.92e-43 163
Msa0503580 MtrunA17_Chr2g0297701 33.758 314 195 7 354 662 261 566 1.01e-42 162
Msa0503580 MtrunA17_Chr2g0284541 38.176 296 166 5 369 661 351 632 6.00e-39 153
Msa0503580 MtrunA17_Chr2g0297691 34.211 304 182 10 366 662 396 688 1.28e-38 152
Msa0503580 MtrunA17_Chr2g0297681 33.660 306 181 10 366 662 394 686 1.81e-38 152
Msa0503580 MtrunA17_Chr5g0410201 30.721 319 193 6 361 663 17 323 5.24e-38 144
Msa0503580 MtrunA17_Chr5g0410271 30.408 319 194 6 361 663 16 322 1.30e-37 142
Msa0503580 MtrunA17_Chr3g0100741 31.195 343 210 7 318 651 256 581 2.29e-37 147
Msa0503580 MtrunA17_Chr2g0297651 33.775 302 185 8 366 662 396 687 1.85e-36 145
Msa0503580 MtrunA17_Chr6g0456141 30.945 307 190 5 362 658 80 374 2.07e-36 141
Msa0503580 MtrunA17_Chr2g0286571 35.178 253 155 3 19 269 5 250 6.51e-36 137
Msa0503580 MtrunA17_Chr3g0096941 23.878 624 386 14 28 647 41 579 1.59e-35 142
Msa0503580 MtrunA17_Chr5g0410171 30.263 304 189 5 370 663 439 729 2.93e-34 139
Msa0503580 MtrunA17_Chr5g0410371 32.107 299 190 5 371 663 1 292 6.52e-33 129
Msa0503580 MtrunA17_Chr5g0410191 34.574 188 122 1 476 663 2 188 1.09e-31 122
Msa0503580 MtrunA17_Chr5g0410461 32.268 313 196 7 360 663 155 460 4.28e-31 127
Msa0503580 MtrunA17_Chr2g0297711 29.492 295 193 6 374 662 238 523 1.91e-30 126
Msa0503580 MtrunA17_Chr3g0100301 35.266 207 133 1 460 665 204 410 2.03e-30 124
Msa0503580 MtrunA17_Chr3g0100301 28.966 145 102 1 116 259 12 156 5.15e-13 71.6
Msa0503580 MtrunA17_Chr5g0439041 43.609 133 70 2 346 476 39 168 4.54e-26 106
Msa0503580 MtrunA17_Chr5g0410581 28.571 301 186 6 370 655 498 784 1.50e-25 112
Msa0503580 MtrunA17_Chr3g0098511 47.727 88 44 1 580 665 1 88 7.68e-23 93.6
Msa0503580 MtrunA17_Chr5g0439031 35.897 195 80 5 181 330 7 201 3.28e-21 93.2
Msa0503580 MtrunA17_Chr5g0410541 37.692 130 80 1 491 620 38 166 3.17e-18 84.3
Msa0503580 MtrunA17_Chr5g0410451 35.135 148 96 0 476 623 41 188 9.96e-18 83.2
Msa0503580 MtrunA17_Chr5g0410181 35.385 130 81 3 535 663 2 129 1.90e-17 79.3
Msa0503580 MtrunA17_Chr2g0297611 41.573 89 50 2 481 569 1 87 8.66e-16 73.2
Msa0503580 MtrunA17_Chr5g0410291 31.937 191 116 6 45 229 9 191 4.02e-14 72.0
Msa0503580 MtrunA17_Chr5g0410211 31.313 198 114 8 46 229 7 196 7.60e-14 70.9
Msa0503580 MtrunA17_Chr1g0211531 26.689 296 203 8 374 662 243 531 1.44e-13 73.9
Msa0503580 MtrunA17_Chr2g0297521 43.056 72 39 2 481 552 15 84 7.22e-13 64.7
Msa0503580 MtrunA17_Chr3g0100921 30.303 132 92 0 525 656 2 133 2.85e-12 64.7
Msa0503580 MtrunA17_Chr7g0263471 30.921 152 95 3 56 207 125 266 4.83e-12 68.9
Msa0503580 MtrunA17_Chr1g0211511 23.684 228 166 3 359 585 5 225 7.57e-12 67.4
Msa0503580 MtrunA17_Chr5g0410511 29.333 150 104 2 483 631 10 158 8.04e-12 65.1
Msa0503580 MtrunA17_Chr5g0410381 30.093 216 105 9 49 229 37 241 1.79e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0503580 AT3G18670.2 26.890 688 395 19 1 662 30 635 2.69e-53 194
Msa0503580 AT5G04730.1 26.852 540 309 14 133 662 122 585 1.32e-42 163
Msa0503580 AT5G04690.3 26.187 611 354 15 56 662 111 628 5.98e-41 159
Msa0503580 AT3G18670.1 26.645 608 355 19 62 662 57 580 1.41e-40 157
Msa0503580 AT5G04690.2 26.221 614 364 15 56 662 111 642 1.62e-40 157
Msa0503580 AT5G35810.1 31.773 299 186 6 374 662 38 328 5.08e-38 145
Msa0503580 AT5G04700.1 25.518 627 357 15 56 662 116 652 1.02e-35 144
Msa0503580 AT3G54065.1 42.073 164 89 1 463 620 9 172 3.37e-32 125
Msa0503580 AT5G04690.1 29.630 351 228 7 321 662 268 608 2.68e-31 130
Msa0503580 AT5G04680.1 25.509 639 379 18 56 662 103 676 1.83e-29 124
Msa0503580 AT5G04680.2 26.742 531 306 15 180 662 29 524 5.61e-26 113
Msa0503580 AT5G04680.4 26.742 531 306 15 180 662 152 647 9.95e-26 113
Msa0503580 AT5G04680.3 29.381 388 230 9 312 662 253 633 1.30e-25 112

Find 147 sgRNAs with CRISPR-Local

Find 609 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTGTCTTCGCGGCATTT+TGG 0.176717 3_4:-46903090 None:intergenic
CGATTGCTTCATCAACCTTT+AGG 0.181694 3_4:-46895077 None:intergenic
AATATACATTAGAAGGAAAA+TGG 0.201291 3_4:+46892097 Msa0503580:CDS
TCAACTCTTGAAGAGATTTA+TGG 0.204870 3_4:+46901216 Msa0503580:CDS
AAAATTAGAACCAACTTAAA+AGG 0.230269 3_4:+46902550 Msa0503580:CDS
ATTGATATTCATAACGAAAA+TGG 0.255413 3_4:+46892390 Msa0503580:CDS
CTCACATCTCGTATTGGTTT+GGG 0.262944 3_4:-46901271 None:intergenic
CGATACCTTGCTCTTGATTT+CGG 0.271138 3_4:-46901321 None:intergenic
ACTACCATCATACGCTAATT+TGG 0.275826 3_4:-46902608 None:intergenic
GATTGCTTCATCAACCTTTA+GGG 0.283874 3_4:-46895076 None:intergenic
GGTGTTTGATGAATTGAAAA+TGG 0.289988 3_4:+46903134 Msa0503580:three_prime_UTR
CCAATGTCGTTGAGGCATTA+AGG 0.302274 3_4:+46902155 Msa0503580:CDS
CATCATGAACATTATAGAAT+TGG 0.311208 3_4:+46890828 Msa0503580:exon
GGCAGTGAACATTGCAATAA+TGG 0.312232 3_4:-46902926 None:intergenic
TAACATGTGTCGTAGTTCTT+TGG 0.318994 3_4:-46895144 None:intergenic
CTTACATGTAAGAATGAAAA+AGG 0.321199 3_4:+46892279 Msa0503580:CDS
ACTCACATCTCGTATTGGTT+TGG 0.321581 3_4:-46901272 None:intergenic
ATTTCTTGCTGCAGTCAAAA+TGG 0.335855 3_4:-46902023 None:intergenic
CAAATCATTTCTGAAATCTC+TGG 0.342850 3_4:-46902863 None:intergenic
AAGAAGTGGTTGCATAAATT+AGG 0.344306 3_4:-46903002 None:intergenic
TTTGCTCTGTCATCGTTAAT+CGG 0.353195 3_4:+46902778 Msa0503580:CDS
CTAAAGGAATATACATTAGA+AGG 0.360740 3_4:+46892090 Msa0503580:CDS
GATCGAGATTTGAACATTCC+TGG 0.361867 3_4:+46902280 Msa0503580:CDS
GGAGTAAGTCCACGTTTGTT+TGG 0.378403 3_4:-46893581 None:intergenic
ATGTTCACTGCCTTCTGCTC+TGG 0.379997 3_4:+46902937 Msa0503580:CDS
TGCTGCATCAAGCACTGTGC+CGG 0.384307 3_4:+46902696 Msa0503580:CDS
GTTGTAGCAGCACTCCTTGC+CGG 0.389174 3_4:+46902664 Msa0503580:CDS
TTTATTTATATGTATGATGT+TGG 0.391082 3_4:+46903268 Msa0503580:three_prime_UTR
TGTTTCTTGCTGCATTGTCT+TGG 0.401537 3_4:+46892424 Msa0503580:CDS
AAACTCAGAGATTAAATTGA+AGG 0.404675 3_4:-46890792 None:intergenic
GGTGGCAACAGAAGCGAAAC+AGG 0.406661 3_4:+46902718 Msa0503580:CDS
GAGATCTTATTAGAAGCAAT+GGG 0.406717 3_4:+46892502 Msa0503580:CDS
AATGTTCATGATGGTCTTCA+AGG 0.409938 3_4:-46890818 None:intergenic
ATAGCGGATACAAATTGATA+TGG 0.412451 3_4:+46893639 Msa0503580:CDS
TCTCTTCCTTATCCACCCCT+TGG 0.414114 3_4:-46902225 None:intergenic
TGATGAATTGAAAATGGGTT+TGG 0.423026 3_4:+46903140 Msa0503580:three_prime_UTR
TGCTAAGCGGCTGCTGCGGA+AGG 0.423498 3_4:+46895215 Msa0503580:CDS
AGATGAAGCAAAAGCACAAA+TGG 0.424240 3_4:+46901188 Msa0503580:CDS
GCAGGCTTTCCTTCCAATGC+TGG 0.425796 3_4:-46902745 None:intergenic
TTTAATCCAAGGGGTGGATA+AGG 0.427960 3_4:+46902219 Msa0503580:CDS
GTAATGTACATACCAGGATT+AGG 0.433184 3_4:-46895240 None:intergenic
CTCTCAAACTTCTTGCTACT+AGG 0.436619 3_4:+46893603 Msa0503580:CDS
GATATATGTGAATGTATCAT+AGG 0.438316 3_4:+46892342 Msa0503580:CDS
AATTGAAAATGGGTTTGGTT+TGG 0.439147 3_4:+46903145 Msa0503580:three_prime_UTR
TTTGGAATGTCGATAAGCTC+TGG 0.443635 3_4:-46893563 None:intergenic
ATATACATTAGAAGGAAAAT+GGG 0.444753 3_4:+46892098 Msa0503580:CDS
GTTCCACTCACATCTCGTAT+TGG 0.445375 3_4:-46901277 None:intergenic
ATCATGAACATTATAGAATT+GGG 0.449600 3_4:+46890829 Msa0503580:exon
CAATTTGTATCCGCTATAGA+AGG 0.449699 3_4:-46893633 None:intergenic
CCCCGTGACTTTGTATGCAA+TGG 0.453161 3_4:+46903026 Msa0503580:CDS
ATGAAGCAATCGAATATTAT+CGG 0.454016 3_4:+46895088 Msa0503580:CDS
ATCTCGTATTGGTTTGGGGC+CGG 0.456395 3_4:-46901266 None:intergenic
GTGTTTGATGAATTGAAAAT+GGG 0.462739 3_4:+46903135 Msa0503580:three_prime_UTR
AATCCCACAAGAAGTTTCCT+TGG 0.465377 3_4:-46902886 None:intergenic
GCCCTTATCACTTGTCTTCG+CGG 0.465966 3_4:-46903098 None:intergenic
GCCGCGAAGACAAGTGATAA+GGG 0.474182 3_4:+46903097 Msa0503580:three_prime_UTR
ATAAGGGCGAGGATTTATAA+AGG 0.476467 3_4:+46903113 Msa0503580:three_prime_UTR
AAATGGCATAGTTGAAATAG+TGG 0.476650 3_4:+46902042 Msa0503580:CDS
AAGAATAGTTCCTATAAAAG+TGG 0.476720 3_4:-46892473 None:intergenic
TGCCGCGAAGACAAGTGATA+AGG 0.476802 3_4:+46903096 Msa0503580:three_prime_UTR
TATGAATCATACTTGGGAAC+CGG 0.477759 3_4:+46901247 Msa0503580:CDS
CGAAACAGGTGAACCAGCAT+TGG 0.478309 3_4:+46902732 Msa0503580:CDS
ATCATTTGCAAGGCAGCTCC+AGG 0.481063 3_4:-46902298 None:intergenic
GAATCCGTATGAATCATACT+TGG 0.486143 3_4:+46901240 Msa0503580:CDS
AGAGATCTTATTAGAAGCAA+TGG 0.486845 3_4:+46892501 Msa0503580:CDS
TCCGCAGCAGCCGCTTAGCA+AGG 0.487234 3_4:-46895212 None:intergenic
ACAAATTGATATGGTGGAAG+AGG 0.487503 3_4:+46893648 Msa0503580:CDS
CACAAACATTTCTGAAACAA+AGG 0.490235 3_4:+46901988 Msa0503580:CDS
TCAAGAAGATCAATGTAAAG+TGG 0.494589 3_4:-46903057 None:intergenic
TTCGAGAAGTGAGTATAGAA+AGG 0.498713 3_4:-46902834 None:intergenic
GCTGCATCAAGCACTGTGCC+GGG 0.500343 3_4:+46902697 Msa0503580:CDS
AAAGAAATTGCCAGAGCAGA+AGG 0.504129 3_4:-46902947 None:intergenic
CATTTGATACTTTAATCCAA+GGG 0.507007 3_4:+46902209 Msa0503580:CDS
ACATTTGATACTTTAATCCA+AGG 0.511114 3_4:+46902208 Msa0503580:CDS
TCTGAAGCTTAACTTAAAGC+TGG 0.512310 3_4:+46903334 Msa0503580:three_prime_UTR
CTGCGGAAGGAACCTAATCC+TGG 0.515633 3_4:+46895228 Msa0503580:CDS
GCCATTGCATACAAAGTCAC+GGG 0.520744 3_4:-46903027 None:intergenic
TTGCCAAGGAAACTTCTTGT+GGG 0.520830 3_4:+46902883 Msa0503580:CDS
CTTGATGCTGCAAGGTGCAA+AGG 0.522226 3_4:-46892309 None:intergenic
TGAATCCTCTTGATGCTGCA+AGG 0.522236 3_4:-46892317 None:intergenic
CCTTAATGCCTCAACGACAT+TGG 0.524122 3_4:-46902155 None:intergenic
AGGAAAATGGGATGAAGTTG+AGG 0.536708 3_4:+46892110 Msa0503580:CDS
GCCTTGCTAAGCGGCTGCTG+CGG 0.540908 3_4:+46895211 Msa0503580:CDS
AGTTACACTCTATATGTAGT+TGG 0.540930 3_4:+46890700 Msa0503580:five_prime_UTR
ACTTTACATTGATCTTCTTG+AGG 0.543568 3_4:+46903059 Msa0503580:CDS
CACAGTGCTTGATGCAGCAA+AGG 0.545307 3_4:-46902692 None:intergenic
TATACCTGTGGAAACCCTAA+AGG 0.548068 3_4:+46895062 Msa0503580:CDS
CGCTTAGCAAGGCGTATAAG+TGG 0.549395 3_4:-46895201 None:intergenic
GAATGTATCATAGGAGAAGT+TGG 0.549630 3_4:+46892351 Msa0503580:CDS
AAGTATATTGCTCTAAACAT+AGG 0.549889 3_4:-46903214 None:intergenic
ATTTCAGAAATGATTTGCCA+AGG 0.551503 3_4:+46902869 Msa0503580:CDS
GTTCCCAAGTATGATTCATA+CGG 0.551579 3_4:-46901244 None:intergenic
TCATAGGAGAAGTTGGTGAA+AGG 0.554331 3_4:+46892358 Msa0503580:CDS
TCAACCTTTAGGGTTTCCAC+AGG 0.554331 3_4:-46895066 None:intergenic
GTTTCGCTTCTGTTGCCACC+CGG 0.555784 3_4:-46902715 None:intergenic
AGAGCAAATGCATCAAATGC+AGG 0.556184 3_4:-46902763 None:intergenic
AATCTTAAGTCACAAGAATG+AGG 0.558190 3_4:+46892251 Msa0503580:CDS
TGATACTTTAATCCAAGGGG+TGG 0.561334 3_4:+46902213 Msa0503580:CDS
CACTTATACGCCTTGCTAAG+CGG 0.561645 3_4:+46895202 Msa0503580:CDS
TTGCACCTTGCAGCATCAAG+AGG 0.564363 3_4:+46892312 Msa0503580:CDS
TGCCATTGCATACAAAGTCA+CGG 0.565179 3_4:-46903028 None:intergenic
CTACACGTGGCAGTAAATGA+TGG 0.568764 3_4:+46892195 Msa0503580:CDS
CATGCCAAATTAGCGTATGA+TGG 0.569816 3_4:+46902604 Msa0503580:CDS
CAATTCTATAATGTTCATGA+TGG 0.573926 3_4:-46890827 None:intergenic
ATATGTATGATGTTGGATTG+TGG 0.575658 3_4:+46903275 Msa0503580:three_prime_UTR
GTGTCCAGAGGATATGCTAA+AGG 0.577381 3_4:+46892074 Msa0503580:intron
GACAATGCAGCAAGAAACAA+AGG 0.580270 3_4:-46892420 None:intergenic
TCACATCTCGTATTGGTTTG+GGG 0.581676 3_4:-46901270 None:intergenic
TTAACATCATATATCGAACT+TGG 0.582590 3_4:-46902085 None:intergenic
GCTATTCCACATCATTTGCA+AGG 0.586289 3_4:-46902308 None:intergenic
TTTGCCAAGGAAACTTCTTG+TGG 0.590940 3_4:+46902882 Msa0503580:CDS
TTCTTCACTGTGCCATCCAG+AGG 0.591276 3_4:+46892532 Msa0503580:CDS
TGATGCAGCAAAGGAAACGC+CGG 0.595058 3_4:-46902683 None:intergenic
CAGCAAAGGAAACGCCGGCA+AGG 0.596873 3_4:-46902678 None:intergenic
GAGCTGCCTTGCAAATGATG+TGG 0.597239 3_4:+46902302 Msa0503580:CDS
GCGGATACAAATTGATATGG+TGG 0.600403 3_4:+46893642 Msa0503580:CDS
GTATCCGCTATAGAAGGCTG+AGG 0.600579 3_4:-46893627 None:intergenic
ACAGGTGAACCAGCATTGGA+AGG 0.601493 3_4:+46902736 Msa0503580:CDS
TACAGCCGAAATCAAGAGCA+AGG 0.609152 3_4:+46901316 Msa0503580:CDS
TGATGGTAGTACATGGCTGA+AGG 0.611977 3_4:+46902621 Msa0503580:CDS
CTAGTAGCAAGAAGTTTGAG+AGG 0.613992 3_4:-46893602 None:intergenic
GAAGACAAGTGATAAGGGCG+AGG 0.617186 3_4:+46903102 Msa0503580:three_prime_UTR
TAGCGTATGATGGTAGTACA+TGG 0.619831 3_4:+46902614 Msa0503580:CDS
CAAAGTCACGGGGAAAGAAG+TGG 0.621863 3_4:-46903016 None:intergenic
AATCCGTATGAATCATACTT+GGG 0.625455 3_4:+46901241 Msa0503580:CDS
ATAGTGATCAACAAAAGTAG+AGG 0.632306 3_4:+46892165 Msa0503580:CDS
CAAGAGAACCAATGTCGTTG+AGG 0.635351 3_4:+46902147 Msa0503580:CDS
ATTTGATACTTTAATCCAAG+GGG 0.639816 3_4:+46902210 Msa0503580:CDS
GGCAGTAAATGATGGCAATG+AGG 0.641440 3_4:+46892203 Msa0503580:CDS
AGCAGCACATATATCACGGA+AGG 0.642525 3_4:+46890868 Msa0503580:CDS
ACCATGGATCAGTATACAGA+AGG 0.646060 3_4:+46902508 Msa0503580:intron
AAGCAAAAGCACAAATGGAG+TGG 0.647330 3_4:+46901193 Msa0503580:CDS
AGGCCCTCAGCCTTCTATAG+CGG 0.649559 3_4:+46893623 Msa0503580:CDS
TGTAGCTGCTAAATGTAGCA+CGG 0.651837 3_4:-46902251 None:intergenic
TGACAGCAGCACATATATCA+CGG 0.655166 3_4:+46890864 Msa0503580:CDS
TCTTCACTGTGCCATCCAGA+GGG 0.656181 3_4:+46892533 Msa0503580:CDS
AAACCAATACGAGATGTGAG+TGG 0.666256 3_4:+46901274 Msa0503580:CDS
TATCCGCTATAGAAGGCTGA+GGG 0.669211 3_4:-46893626 None:intergenic
TAGAGGAACAGCACTACACG+TGG 0.671680 3_4:+46892182 Msa0503580:CDS
ACTATCAAAAGGTATACCTG+TGG 0.675902 3_4:+46895050 Msa0503580:intron
GCATCAAGCACTGTGCCGGG+TGG 0.679464 3_4:+46902700 Msa0503580:CDS
TGGAACATAACACTAACACA+TGG 0.680133 3_4:+46890720 Msa0503580:five_prime_UTR
TGAACATAGGTACAAACACA+TGG 0.690940 3_4:+46902975 Msa0503580:CDS
CTTAAGTCACAAGAATGAGG+AGG 0.691763 3_4:+46892254 Msa0503580:CDS
ATCGACATTCCAAACAAACG+TGG 0.704850 3_4:+46893572 Msa0503580:CDS
CCATTGCATACAAAGTCACG+GGG 0.723569 3_4:-46903026 None:intergenic
AGATCTTATTAGAAGCAATG+GGG 0.739279 3_4:+46892503 Msa0503580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr3_4:46897078-46897097 Msa0503580:intron 0.0%
!! TATATATATATATATATATA+GGG + chr3_4:46897079-46897098 Msa0503580:intron 0.0%
!!! TTTAAATTTTTAAATATTAA+TGG + chr3_4:46898374-46898393 Msa0503580:intron 0.0%
!!! TGTTTTTTTATATTAATCAA+TGG - chr3_4:46891107-46891126 None:intergenic 10.0%
!! TGATTAATATAAAAAAACAA+AGG + chr3_4:46891108-46891127 Msa0503580:intron 10.0%
!! AATATGATTTATTAAAAACA+AGG + chr3_4:46892880-46892899 Msa0503580:intron 10.0%
!! ATAATTATTAAATAAGCTAT+TGG + chr3_4:46893004-46893023 Msa0503580:intron 10.0%
!! AAATAAAAATAATAAAGTAG+TGG + chr3_4:46893152-46893171 Msa0503580:intron 10.0%
!!! CTACATTTTTTTTTATATTT+TGG - chr3_4:46893300-46893319 None:intergenic 10.0%
!!! TTTTTTTTTGTTTTGAAAAA+GGG - chr3_4:46894221-46894240 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTTGAAAA+AGG - chr3_4:46894222-46894241 None:intergenic 10.0%
!! ATAAAGTAATAAATAGTAAA+AGG - chr3_4:46894595-46894614 None:intergenic 10.0%
!! AAATATAGTTAATGTTATAT+AGG + chr3_4:46895341-46895360 Msa0503580:intron 10.0%
!!! AAAATATGTTTTTAAATTGT+AGG + chr3_4:46896693-46896712 Msa0503580:intron 10.0%
!! AAGCATTTATAATTATTAAA+AGG + chr3_4:46896794-46896813 Msa0503580:intron 10.0%
!! AGCATTTATAATTATTAAAA+GGG + chr3_4:46896795-46896814 Msa0503580:intron 10.0%
!!! CCATTTTTTTTTTTTTTTTA+AGG - chr3_4:46897713-46897732 None:intergenic 10.0%
!! CCTTAAAAAAAAAAAAAAAA+TGG + chr3_4:46897710-46897729 Msa0503580:intron 10.0%
!! AAAAAAATAATGTTAAAGAT+TGG - chr3_4:46898941-46898960 None:intergenic 10.0%
!! AAAAAAATAATGTTAAAAGT+TGG - chr3_4:46899131-46899150 None:intergenic 10.0%
!! CAAAAAATAATGTTAAAAAT+TGG - chr3_4:46899450-46899469 None:intergenic 10.0%
!!! CTATTTGTATTTAAAATTAA+GGG + chr3_4:46900200-46900219 Msa0503580:intron 10.0%
!!! GTAATTTTAAATACTTACTT+TGG + chr3_4:46891143-46891162 Msa0503580:intron 15.0%
!!! TATTAGTGATTAATTTTCAT+TGG - chr3_4:46891766-46891785 None:intergenic 15.0%
!! TTACTACTTGAAAAAAAAAA+TGG - chr3_4:46892024-46892043 None:intergenic 15.0%
!!! ATAACCATTAATATTTTTGA+AGG - chr3_4:46892934-46892953 None:intergenic 15.0%
!! TCAAAAATATTAATGGTTAT+TGG + chr3_4:46892934-46892953 Msa0503580:intron 15.0%
!!! TTTTTTCTTTATCAATTACT+CGG - chr3_4:46893217-46893236 None:intergenic 15.0%
!! AAAAAATAAGTTGTTAGTTA+AGG + chr3_4:46893231-46893250 Msa0503580:intron 15.0%
!! TAAAAGATTCTTCAAAAAAA+AGG - chr3_4:46893434-46893453 None:intergenic 15.0%
!! ATATTAAAATTGAGACAAAA+AGG + chr3_4:46893741-46893760 Msa0503580:intron 15.0%
!! GAACAAAAAAAATATATATG+CGG - chr3_4:46894044-46894063 None:intergenic 15.0%
!!! TCTTTAAGTTTTACTTTTAT+TGG - chr3_4:46894101-46894120 None:intergenic 15.0%
!! AATAAAAGTAAAACTTAAAG+AGG + chr3_4:46894100-46894119 Msa0503580:intron 15.0%
!! ATAAAAGTAAAACTTAAAGA+GGG + chr3_4:46894101-46894120 Msa0503580:intron 15.0%
!! TAGTAAAAAAAACTATAAGA+GGG - chr3_4:46894298-46894317 None:intergenic 15.0%
!! TAGTAAAAAAAACTATAAGA+GGG - chr3_4:46894298-46894317 None:intergenic 15.0%
!!! AAATTAAAAGCATTCATTAA+TGG - chr3_4:46894651-46894670 None:intergenic 15.0%
!! GAAAATTCTATCAAATTAAA+AGG - chr3_4:46895770-46895789 None:intergenic 15.0%
!!! AATACATTTTTTCAGTATTT+GGG - chr3_4:46896139-46896158 None:intergenic 15.0%
!!! TAATACATTTTTTCAGTATT+TGG - chr3_4:46896140-46896159 None:intergenic 15.0%
!!! TTATTAACAACAAAGTTTTT+AGG - chr3_4:46896273-46896292 None:intergenic 15.0%
!! TTGCAATTAAAAAAATTGAA+TGG - chr3_4:46896776-46896795 None:intergenic 15.0%
!!! TATTTAAAACTAATAACTTG+AGG + chr3_4:46897249-46897268 Msa0503580:intron 15.0%
!!! ATTTAAAACTAATAACTTGA+GGG + chr3_4:46897250-46897269 Msa0503580:intron 15.0%
!! AAAGTTTATATATACTTTAG+TGG - chr3_4:46897477-46897496 None:intergenic 15.0%
!!! TCTTTTAAAAAAAATGTCAA+AGG + chr3_4:46897610-46897629 Msa0503580:intron 15.0%
!!! ATTTTATTATATCATGTGTT+TGG + chr3_4:46897996-46898015 Msa0503580:intron 15.0%
!!! TGTTACTAATATTTTTTTAG+AGG + chr3_4:46898778-46898797 Msa0503580:intron 15.0%
!!! TATTACTAATCTTTTTTTAG+AGG + chr3_4:46899033-46899052 Msa0503580:intron 15.0%
!!! ATTACTAATATTTTTATCAG+AGG + chr3_4:46899097-46899116 Msa0503580:intron 15.0%
!!! TTTGTTACTAATCTTTTATT+AGG + chr3_4:46899188-46899207 Msa0503580:intron 15.0%
!!! TTGTTACTAATCTTTTATTA+GGG + chr3_4:46899189-46899208 Msa0503580:intron 15.0%
!!! TGTTACTAATATTTTTTTAG+AGG + chr3_4:46898778-46898797 Msa0503580:intron 15.0%
!! CAAAAAATATTGTTAAAGAT+TGG - chr3_4:46899068-46899087 None:intergenic 15.0%
!!! TGTTACTAATATTTTATTAG+AGG + chr3_4:46899509-46899528 Msa0503580:intron 15.0%
!!! TGTTACTAATATTTTTTTAG+AGG + chr3_4:46898778-46898797 Msa0503580:intron 15.0%
!! CAAAAAATATTGTTAAAGAT+TGG - chr3_4:46899068-46899087 None:intergenic 15.0%
!!! TTGTTACTAATTTTTTTTAG+AGG + chr3_4:46899634-46899653 Msa0503580:intron 15.0%
!!! GCTATTTGTATTTAAAATTA+AGG + chr3_4:46900199-46900218 Msa0503580:intron 15.0%
!!! TTTAAAATTAAGGGTATTTT+TGG + chr3_4:46900209-46900228 Msa0503580:intron 15.0%
!! CAATTCTATATAATTCAATT+GGG - chr3_4:46900492-46900511 None:intergenic 15.0%
!! TCAATTCTATATAATTCAAT+TGG - chr3_4:46900493-46900512 None:intergenic 15.0%
!!! TAATTTTAATCCTTAGTTTT+TGG - chr3_4:46900792-46900811 None:intergenic 15.0%
!! TATAAGATATGATTAGTAAT+AGG + chr3_4:46900821-46900840 Msa0503580:intron 15.0%
!!! TTTAATTTATCATATCCTAT+TGG + chr3_4:46900844-46900863 Msa0503580:intron 15.0%
!!! TATTAACCTTTATTTTAGAT+TGG + chr3_4:46900985-46901004 Msa0503580:intron 15.0%
!! CTAAATTTAGATGAATAAAA+GGG + chr3_4:46901381-46901400 Msa0503580:intron 15.0%
!! AAATAGAATGAAATAATCAT+TGG + chr3_4:46901495-46901514 Msa0503580:intron 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + chr3_4:46901622-46901641 Msa0503580:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr3_4:46901662-46901681 Msa0503580:intron 15.0%
!!! AGATTTAAAATGTATCAATT+TGG - chr3_4:46901760-46901779 None:intergenic 15.0%
!! ATTAGATTAAACATCTAAAT+TGG - chr3_4:46901804-46901823 None:intergenic 15.0%
!! TTTATTTATATGTATGATGT+TGG + chr3_4:46903268-46903287 Msa0503580:three_prime_UTR 15.0%
!! ATCATGAACATTATAGAATT+GGG + chr3_4:46890829-46890848 Msa0503580:exon 20.0%
!! AATTTCCGTTTAAAAAGTAA+AGG + chr3_4:46891006-46891025 Msa0503580:intron 20.0%
!! ATATAAAAAAACAAAGGTCT+AGG + chr3_4:46891114-46891133 Msa0503580:intron 20.0%
!! AGTTAAACACTTAAACTATT+GGG - chr3_4:46891254-46891273 None:intergenic 20.0%
!! AAGTTAAACACTTAAACTAT+TGG - chr3_4:46891255-46891274 None:intergenic 20.0%
!! AATTAGATTTATTCCTTGTT+TGG - chr3_4:46891661-46891680 None:intergenic 20.0%
!! ACATTTCAAATTGAGTTAAT+CGG - chr3_4:46891714-46891733 None:intergenic 20.0%
!! ACATTTCAAATAGAGTTAAT+CGG - chr3_4:46892054-46892073 None:intergenic 20.0%
!! AATATACATTAGAAGGAAAA+TGG + chr3_4:46892097-46892116 Msa0503580:CDS 20.0%
!! ATATACATTAGAAGGAAAAT+GGG + chr3_4:46892098-46892117 Msa0503580:CDS 20.0%
!!! TTTTTCATTCTTACATGTAA+GGG - chr3_4:46892280-46892299 None:intergenic 20.0%
!! ATTGATATTCATAACGAAAA+TGG + chr3_4:46892390-46892409 Msa0503580:CDS 20.0%
!! TTATGAAAAATTGAATGAGA+TGG - chr3_4:46892698-46892717 None:intergenic 20.0%
!!! AGGATTTAATATATTTTGTG+AGG + chr3_4:46892900-46892919 Msa0503580:intron 20.0%
!! TAAAAAGAATGGTATATTGA+TGG + chr3_4:46892958-46892977 Msa0503580:intron 20.0%
!! CATCGAATATATTTCTTATA+TGG - chr3_4:46893839-46893858 None:intergenic 20.0%
!! TAAAAGTAAAACTTAAAGAG+GGG + chr3_4:46894102-46894121 Msa0503580:intron 20.0%
!!! TGATATCTAAGATTATAGTT+GGG - chr3_4:46894196-46894215 None:intergenic 20.0%
!! CTAGTAAAAAAAACTATAAG+AGG - chr3_4:46894299-46894318 None:intergenic 20.0%
!! CTAGTAAAAAAAACTATAAG+AGG - chr3_4:46894299-46894318 None:intergenic 20.0%
!! ACAAAAATATCATTCATTGA+TGG - chr3_4:46894686-46894705 None:intergenic 20.0%
!! TGTAAATTGATCCTATAAAA+TGG + chr3_4:46894855-46894874 Msa0503580:intron 20.0%
!! TGTTTAAACTTGTGAAATAT+TGG - chr3_4:46895593-46895612 None:intergenic 20.0%
!! AAACTAAAATGATCAAAAGT+GGG - chr3_4:46895698-46895717 None:intergenic 20.0%
!!! TAGTCCTTTAAGTTTTAAAT+AGG + chr3_4:46895794-46895813 Msa0503580:intron 20.0%
!!! ATGACCTATTTAAAACTTAA+AGG - chr3_4:46895801-46895820 None:intergenic 20.0%
!!! AAAACTTTGTTGTTAATAAC+CGG + chr3_4:46896274-46896293 Msa0503580:intron 20.0%
!! ACATTACATTAACCAAAAAA+AGG - chr3_4:46896386-46896405 None:intergenic 20.0%
!! AAATTGTAGGATCTAATATT+AGG + chr3_4:46896706-46896725 Msa0503580:intron 20.0%
!! AATTGTAGGATCTAATATTA+GGG + chr3_4:46896707-46896726 Msa0503580:intron 20.0%
!! ATTAAAAAAATTGAATGGAG+AGG - chr3_4:46896771-46896790 None:intergenic 20.0%
!!! TTATTTTTGTCCAAATGAAA+AGG - chr3_4:46897216-46897235 None:intergenic 20.0%
!!! AATATGTTGATAGTAAAAGT+GGG - chr3_4:46897364-46897383 None:intergenic 20.0%
!!! AAATATGTTGATAGTAAAAG+TGG - chr3_4:46897365-46897384 None:intergenic 20.0%
!! AAAAAAAAAAAAAATGGCCA+AGG + chr3_4:46897716-46897735 Msa0503580:intron 20.0%
!! TCTTTCAAAGATGATATTAT+AGG + chr3_4:46897817-46897836 Msa0503580:intron 20.0%
!! CTTTCAAAGATGATATTATA+GGG + chr3_4:46897818-46897837 Msa0503580:intron 20.0%
!! CAAAAATTCTCATTAATGAA+GGG - chr3_4:46898632-46898651 None:intergenic 20.0%
!! ACAAAAATTCTCATTAATGA+AGG - chr3_4:46898633-46898652 None:intergenic 20.0%
!! AGCAAAAAATTAATGGTAAA+GGG - chr3_4:46898752-46898771 None:intergenic 20.0%
!! AAATGTGAGCAAAAAATTAA+TGG - chr3_4:46898759-46898778 None:intergenic 20.0%
!! CAAAAAATATTGTTGAAGAT+TGG - chr3_4:46899005-46899024 None:intergenic 20.0%
!!! TGTTACTAATCTTTTATTAG+GGG + chr3_4:46899190-46899209 Msa0503580:intron 20.0%
!!! TAAATCCTCTAAAAAAAGAT+TGG - chr3_4:46899041-46899060 None:intergenic 20.0%
!! TTTGTTAGCACTATATTAAA+TGG - chr3_4:46899351-46899370 None:intergenic 20.0%
!! CTTAAATAAATTCCATTCAA+TGG + chr3_4:46899929-46899948 Msa0503580:intron 20.0%
!! TAAAAAATTAGAAAGTTCCA+AGG - chr3_4:46899985-46900004 None:intergenic 20.0%
!!! TTCACGTGTTATTTTATAAT+TGG + chr3_4:46900177-46900196 Msa0503580:intron 20.0%
!! AAACTAGAAGAATATGAATT+TGG + chr3_4:46900545-46900564 Msa0503580:intron 20.0%
!!! ATTTGGTTTCAGATTAAATA+TGG + chr3_4:46900562-46900581 Msa0503580:intron 20.0%
!! ACTAAGGATTAAAATTACAA+AGG + chr3_4:46900795-46900814 Msa0503580:intron 20.0%
!! CAATAAAAATGTCTATAGTT+TGG - chr3_4:46900937-46900956 None:intergenic 20.0%
!!! TAGTAAATCTTACTCAATTT+TGG - chr3_4:46900965-46900984 None:intergenic 20.0%
!!! ATCAAACCAATCTAAAATAA+AGG - chr3_4:46900994-46901013 None:intergenic 20.0%
!!! GGTTTTTTTTTCAATTGAAA+AGG + chr3_4:46901026-46901045 Msa0503580:intron 20.0%
!!! TTTTGGTTGTTATTGTTTTA+TGG + chr3_4:46901124-46901143 Msa0503580:intron 20.0%
!! GCTAAATTTAGATGAATAAA+AGG + chr3_4:46901380-46901399 Msa0503580:intron 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG - chr3_4:46901543-46901562 None:intergenic 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG - chr3_4:46901544-46901563 None:intergenic 20.0%
!!! TCCATAAATATTTTGTAGTT+GGG - chr3_4:46901863-46901882 None:intergenic 20.0%
!!! ATCCATAAATATTTTGTAGT+TGG - chr3_4:46901864-46901883 None:intergenic 20.0%
!! CAGTGTATTTAACATATTAT+TGG + chr3_4:46901920-46901939 Msa0503580:intron 20.0%
!! AAATAAAAATGTATTGCATG+TGG + chr3_4:46902114-46902133 Msa0503580:CDS 20.0%
!! AAAATTAGAACCAACTTAAA+AGG + chr3_4:46902550-46902569 Msa0503580:CDS 20.0%
!!! ATTTCTTTTTGATTGAACAT+AGG + chr3_4:46902962-46902981 Msa0503580:CDS 20.0%
! AAACTCAGAGATTAAATTGA+AGG - chr3_4:46890795-46890814 None:intergenic 25.0%
! CAATTCTATAATGTTCATGA+TGG - chr3_4:46890830-46890849 None:intergenic 25.0%
! CATCATGAACATTATAGAAT+TGG + chr3_4:46890828-46890847 Msa0503580:exon 25.0%
!!! GTCTTCCTTTACTTTTTAAA+CGG - chr3_4:46891014-46891033 None:intergenic 25.0%
! GATTAAAGAAGTTAAACTGT+TGG - chr3_4:46891080-46891099 None:intergenic 25.0%
! TATTGGGAAAAATTATAGAC+AGG - chr3_4:46891238-46891257 None:intergenic 25.0%
! CAATCTACTATTAAAACAAG+TGG - chr3_4:46891358-46891377 None:intergenic 25.0%
!! AATCTAAACATGGTCTTAAT+CGG - chr3_4:46891384-46891403 None:intergenic 25.0%
! CAAATAAGTCAATCTAAACA+TGG - chr3_4:46891394-46891413 None:intergenic 25.0%
!!! TGTAGTAAGTTGTTTTTGTA+GGG - chr3_4:46891460-46891479 None:intergenic 25.0%
!!! ATGTAGTAAGTTGTTTTTGT+AGG - chr3_4:46891461-46891480 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr3_4:46891645-46891664 Msa0503580:intron 25.0%
! AAAAATATAAACTGTTCCTC+TGG - chr3_4:46891741-46891760 None:intergenic 25.0%
! TAGAATAAAGAATATGCTGA+AGG + chr3_4:46891871-46891890 Msa0503580:intron 25.0%
! TGGATAAACAACTTAACTAA+AGG - chr3_4:46891982-46892001 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr3_4:46891645-46891664 Msa0503580:intron 25.0%
! CTAAAGGAATATACATTAGA+AGG + chr3_4:46892090-46892109 Msa0503580:CDS 25.0%
!!! CTTTTTCATTCTTACATGTA+AGG - chr3_4:46892281-46892300 None:intergenic 25.0%
! CTTACATGTAAGAATGAAAA+AGG + chr3_4:46892279-46892298 Msa0503580:CDS 25.0%
! GATATATGTGAATGTATCAT+AGG + chr3_4:46892342-46892361 Msa0503580:CDS 25.0%
! AAGAATAGTTCCTATAAAAG+TGG - chr3_4:46892476-46892495 None:intergenic 25.0%
! TTATGAATACAAGTGATTGA+CGG - chr3_4:46892641-46892660 None:intergenic 25.0%
! GTTGTTTAATCAAGATTTGA+CGG - chr3_4:46892747-46892766 None:intergenic 25.0%
!! AAATCATGCATCTGAAATAT+TGG - chr3_4:46892772-46892791 None:intergenic 25.0%
!!! AAAAAGTGTTGGGTTATTAA+TGG - chr3_4:46892810-46892829 None:intergenic 25.0%
!!! AACCCAACACTTTTTTAATT+TGG + chr3_4:46892815-46892834 Msa0503580:intron 25.0%
!!! TGCCAAATTAAAAAAGTGTT+GGG - chr3_4:46892820-46892839 None:intergenic 25.0%
! TTACATGGAAATAAGTGTTA+AGG + chr3_4:46892852-46892871 Msa0503580:intron 25.0%
!! TAATATATTTTGTGAGGAAC+TGG + chr3_4:46892906-46892925 Msa0503580:intron 25.0%
! GGTACCTTCAAAAATATTAA+TGG + chr3_4:46892927-46892946 Msa0503580:intron 25.0%
!!! ATTATTTTTGTGACAACTTG+TGG + chr3_4:46893269-46893288 Msa0503580:intron 25.0%
!!! TTATTTTTGTGACAACTTGT+GGG + chr3_4:46893270-46893289 Msa0503580:intron 25.0%
! ATGTAATGTTGCATACAATA+AGG - chr3_4:46893462-46893481 None:intergenic 25.0%
! TAACTAATCATAGTTCATGA+AGG + chr3_4:46893915-46893934 Msa0503580:intron 25.0%
! GAAACTTTGTTAATGTGAAA+AGG - chr3_4:46893974-46893993 None:intergenic 25.0%
! AAAAGTAAAACTTAAAGAGG+GGG + chr3_4:46894103-46894122 Msa0503580:intron 25.0%
!!! GGGGGTTTTTTTTTTTTTTT+TGG + chr3_4:46894121-46894140 Msa0503580:intron 25.0%
!!! TTTTGGAAAGAAACTTAAAG+AGG + chr3_4:46894138-46894157 Msa0503580:intron 25.0%
! AAACTTAAAGAGGAATTGTT+AGG + chr3_4:46894148-46894167 Msa0503580:intron 25.0%
! AACTTAAAGAGGAATTGTTA+GGG + chr3_4:46894149-46894168 Msa0503580:intron 25.0%
!! CTGATATCTAAGATTATAGT+TGG - chr3_4:46894197-46894216 None:intergenic 25.0%
! CAACTATAATCTTAGATATC+AGG + chr3_4:46894195-46894214 Msa0503580:intron 25.0%
!!! AAAAGCATTCATTAATGGTA+TGG - chr3_4:46894646-46894665 None:intergenic 25.0%
!! AATATCATTCATTGATGGTA+TGG - chr3_4:46894681-46894700 None:intergenic 25.0%
!! AAAGTGTACTTCCATTTTAT+AGG - chr3_4:46894869-46894888 None:intergenic 25.0%
! ATGAAGCAATCGAATATTAT+CGG + chr3_4:46895088-46895107 Msa0503580:CDS 25.0%
!! TTCTTTGGACATAATTTTTG+TGG - chr3_4:46895132-46895151 None:intergenic 25.0%
! CTCTTATCATTCATATAAGA+AGG + chr3_4:46895553-46895572 Msa0503580:intron 25.0%
! CAAACTAAAATGATCAAAAG+TGG - chr3_4:46895699-46895718 None:intergenic 25.0%
! AAGTTTCGAAAGTTTCAATT+AGG + chr3_4:46895743-46895762 Msa0503580:intron 25.0%
! TAATTATTAACTGACAGCAT+GGG - chr3_4:46895851-46895870 None:intergenic 25.0%
! TTAATTATTAACTGACAGCA+TGG - chr3_4:46895852-46895871 None:intergenic 25.0%
! CAGTAGTATATTGTTTGAAT+GGG + chr3_4:46896306-46896325 Msa0503580:intron 25.0%
! AAAACTATACTACATGTCTT+TGG + chr3_4:46896948-46896967 Msa0503580:intron 25.0%
!!! ATGTCTTTGGTTTTTAATCT+GGG + chr3_4:46896961-46896980 Msa0503580:intron 25.0%
! TAGACCAATAAAAAACATGA+AGG + chr3_4:46897170-46897189 Msa0503580:intron 25.0%
!!! TACTTTAGTGGCTTTAATTA+AGG - chr3_4:46897465-46897484 None:intergenic 25.0%
! AAAGGCAAGAATCATTAAAA+AGG + chr3_4:46897628-46897647 Msa0503580:intron 25.0%
!! ACATGTTCGGTTAATTTTTA+AGG - chr3_4:46897678-46897697 None:intergenic 25.0%
! GATATGTAAGAAATTGGATA+AGG + chr3_4:46897895-46897914 Msa0503580:intron 25.0%
! TCCAAACTAACAATTCAAAT+AGG + chr3_4:46898032-46898051 Msa0503580:intron 25.0%
! TCCTATTTGAATTGTTAGTT+TGG - chr3_4:46898036-46898055 None:intergenic 25.0%
! ATTAATGAAGGGAAAATAGA+AGG - chr3_4:46898621-46898640 None:intergenic 25.0%
! GAGCAAAAAATTAATGGTAA+AGG - chr3_4:46898753-46898772 None:intergenic 25.0%
!!! TCACTAATATTTTTTTCCAG+AGG + chr3_4:46898843-46898862 Msa0503580:intron 25.0%
!! GTTACTAATCTTTTTATCAG+AGG + chr3_4:46898970-46898989 Msa0503580:intron 25.0%
!!! TGTTACCAATCTTTTTTTAG+AGG + chr3_4:46899316-46899335 Msa0503580:intron 25.0%
!!! GGAACTTTCTAATTTTTTAG+AGG + chr3_4:46899986-46900005 Msa0503580:intron 25.0%
!! TTAGTTTGATCTGTTGTTAA+CGG + chr3_4:46900108-46900127 Msa0503580:intron 25.0%
! GTATAGATAATACTAGATCT+CGG + chr3_4:46900286-46900305 Msa0503580:intron 25.0%
!!! TGACTTTAGTGTATTTTAGA+TGG - chr3_4:46900434-46900453 None:intergenic 25.0%
! TTCTATATAATTCAATTGGG+TGG - chr3_4:46900489-46900508 None:intergenic 25.0%
! TTTCAGATTAAATATGGATC+TGG + chr3_4:46900568-46900587 Msa0503580:intron 25.0%
! TTCAGATTAAATATGGATCT+GGG + chr3_4:46900569-46900588 Msa0503580:intron 25.0%
!!! TTTAATCCTTAGTTTTTGGT+GGG - chr3_4:46900788-46900807 None:intergenic 25.0%
!!! TTTTAATCCTTAGTTTTTGG+TGG - chr3_4:46900789-46900808 None:intergenic 25.0%
!! TTGGTTTGATTAATGACAAA+AGG + chr3_4:46901004-46901023 Msa0503580:intron 25.0%
! TGGTTTGATTAATGACAAAA+GGG + chr3_4:46901005-46901024 Msa0503580:intron 25.0%
!!! AAGCTTTGTTTTGACTATTT+TGG + chr3_4:46901107-46901126 Msa0503580:intron 25.0%
!!! TGTGCTCAAAATTTGTTAAA+AGG + chr3_4:46901148-46901167 Msa0503580:intron 25.0%
!!! GTGCTCAAAATTTGTTAAAA+GGG + chr3_4:46901149-46901168 Msa0503580:intron 25.0%
!!! TGCTCAAAATTTGTTAAAAG+GGG + chr3_4:46901150-46901169 Msa0503580:intron 25.0%
! TCCCAACTACAAAATATTTA+TGG + chr3_4:46901859-46901878 Msa0503580:intron 25.0%
! AAATATTTACACATGGATAG+TGG - chr3_4:46901890-46901909 None:intergenic 25.0%
! GTGTGAAAAATATTTACACA+TGG - chr3_4:46901897-46901916 None:intergenic 25.0%
! TTAACATCATATATCGAACT+TGG - chr3_4:46902088-46902107 None:intergenic 25.0%
!!! TTTTGAAAAGTGCTATAAAG+AGG + chr3_4:46902183-46902202 Msa0503580:CDS 25.0%
! ACATTTGATACTTTAATCCA+AGG + chr3_4:46902208-46902227 Msa0503580:CDS 25.0%
! CATTTGATACTTTAATCCAA+GGG + chr3_4:46902209-46902228 Msa0503580:CDS 25.0%
! ATTTGATACTTTAATCCAAG+GGG + chr3_4:46902210-46902229 Msa0503580:CDS 25.0%
!!! GTTCTAATTTTGAAATACTC+TGG - chr3_4:46902541-46902560 None:intergenic 25.0%
! GTGTTTGATGAATTGAAAAT+GGG + chr3_4:46903135-46903154 Msa0503580:three_prime_UTR 25.0%
!! AAGTATATTGCTCTAAACAT+AGG - chr3_4:46903217-46903236 None:intergenic 25.0%
AGTTACACTCTATATGTAGT+TGG + chr3_4:46890700-46890719 Msa0503580:five_prime_UTR 30.0%
!!! CTTTTTTTCATGCACACATA+TGG + chr3_4:46890969-46890988 Msa0503580:intron 30.0%
AAAAAACAAAGGTCTAGGTT+TGG + chr3_4:46891119-46891138 Msa0503580:intron 30.0%
GATTAGAGTTATTCCTTGTT+TGG - chr3_4:46892002-46892021 None:intergenic 30.0%
ATAGTGATCAACAAAAGTAG+AGG + chr3_4:46892165-46892184 Msa0503580:CDS 30.0%
AATCTTAAGTCACAAGAATG+AGG + chr3_4:46892251-46892270 Msa0503580:CDS 30.0%
!! TGTATCTCTTCCACTTTTAT+AGG + chr3_4:46892463-46892482 Msa0503580:CDS 30.0%
AGAGATCTTATTAGAAGCAA+TGG + chr3_4:46892501-46892520 Msa0503580:CDS 30.0%
GAGATCTTATTAGAAGCAAT+GGG + chr3_4:46892502-46892521 Msa0503580:CDS 30.0%
AGATCTTATTAGAAGCAATG+GGG + chr3_4:46892503-46892522 Msa0503580:CDS 30.0%
AATTACCAAAAAATTCCCTC+TGG - chr3_4:46892551-46892570 None:intergenic 30.0%
! CTGCCAAATTAAAAAAGTGT+TGG - chr3_4:46892821-46892840 None:intergenic 30.0%
GCAGAAAGATGAAAATTACA+TGG + chr3_4:46892837-46892856 Msa0503580:intron 30.0%
! TGGTTATTGGCTAAAAAGAA+TGG + chr3_4:46892947-46892966 Msa0503580:intron 30.0%
CTCTAGATTCTTCACTTAAA+AGG + chr3_4:46893095-46893114 Msa0503580:intron 30.0%
TGTGTGTATTACATCAGATT+TGG + chr3_4:46893517-46893536 Msa0503580:intron 30.0%
!! ATAGCGGATACAAATTGATA+TGG + chr3_4:46893639-46893658 Msa0503580:CDS 30.0%
TTCTTATATGGCATCAACTA+GGG - chr3_4:46893827-46893846 None:intergenic 30.0%
TTTCTTATATGGCATCAACT+AGG - chr3_4:46893828-46893847 None:intergenic 30.0%
GAAAAGGAAGGTTTGTAATA+GGG - chr3_4:46893958-46893977 None:intergenic 30.0%
TGAAAAGGAAGGTTTGTAAT+AGG - chr3_4:46893959-46893978 None:intergenic 30.0%
CTTTGTTAATGTGAAAAGGA+AGG - chr3_4:46893970-46893989 None:intergenic 30.0%
! AAATGCAAAGATTTGGTTGT+GGG - chr3_4:46893996-46894015 None:intergenic 30.0%
! TAAATGCAAAGATTTGGTTG+TGG - chr3_4:46893997-46894016 None:intergenic 30.0%
GAGATCTAAATGCAAAGATT+TGG - chr3_4:46894003-46894022 None:intergenic 30.0%
TTTCTATGTATCACAATCTG+AGG + chr3_4:46894410-46894429 Msa0503580:intron 30.0%
TTCTAAATAGAAGAATGCTG+TGG - chr3_4:46894981-46895000 None:intergenic 30.0%
TACTATGACACACTATCAAA+AGG + chr3_4:46895039-46895058 Msa0503580:intron 30.0%
!!! CTTTTTGTTTTTAGCGAGTT+TGG - chr3_4:46895515-46895534 None:intergenic 30.0%
CAAACTCGCTAAAAACAAAA+AGG + chr3_4:46895513-46895532 Msa0503580:intron 30.0%
ATCATTCATATAAGAAGGAC+TGG + chr3_4:46895558-46895577 Msa0503580:intron 30.0%
CTAGAAAAGGAAACTGTATT+GGG - chr3_4:46895623-46895642 None:intergenic 30.0%
GCTCTTTAACAACTTTCTTA+AGG + chr3_4:46895643-46895662 Msa0503580:intron 30.0%
TGTCAAAACGCTATGTTTAA+TGG + chr3_4:46895938-46895957 Msa0503580:intron 30.0%
! GTCTTTCTAGCACTATTAAA+CGG + chr3_4:46896013-46896032 Msa0503580:intron 30.0%
TTGACATGTGGAAGAAAATT+TGG + chr3_4:46896056-46896075 Msa0503580:intron 30.0%
TGACATGTGGAAGAAAATTT+GGG + chr3_4:46896057-46896076 Msa0503580:intron 30.0%
CCATTCAAACAATATACTAC+TGG - chr3_4:46896308-46896327 None:intergenic 30.0%
CCAGTAGTATATTGTTTGAA+TGG + chr3_4:46896305-46896324 Msa0503580:intron 30.0%
TTCAATTTACGCTAACATAG+GGG - chr3_4:46896332-46896351 None:intergenic 30.0%
GTTCAATTTACGCTAACATA+GGG - chr3_4:46896333-46896352 None:intergenic 30.0%
TGTTCAATTTACGCTAACAT+AGG - chr3_4:46896334-46896353 None:intergenic 30.0%
CATTAACCAAAAAAAGGAGA+GGG - chr3_4:46896380-46896399 None:intergenic 30.0%
ACATTAACCAAAAAAAGGAG+AGG - chr3_4:46896381-46896400 None:intergenic 30.0%
TAATAGAGTTTGTAATGCAC+TGG + chr3_4:46896415-46896434 Msa0503580:intron 30.0%
ATTCTCCCTCATGTTAATTT+GGG + chr3_4:46896546-46896565 Msa0503580:intron 30.0%
ATTCTCCCTCATGTTATTAT+GGG + chr3_4:46896872-46896891 Msa0503580:intron 30.0%
AATATTATCCCAAGACATCT+GGG + chr3_4:46896915-46896934 Msa0503580:intron 30.0%
! AGACATGTAGTATAGTTTTC+TGG - chr3_4:46896947-46896966 None:intergenic 30.0%
!!! CATGTCTTTGGTTTTTAATC+TGG + chr3_4:46896960-46896979 Msa0503580:intron 30.0%
! TACTATATTCTTGGTCTTTC+AGG + chr3_4:46896989-46897008 Msa0503580:intron 30.0%
!!! TGGACCTTCATGTTTTTTAT+TGG - chr3_4:46897177-46897196 None:intergenic 30.0%
! CAAAATTGCACCTTTTCATT+TGG + chr3_4:46897203-46897222 Msa0503580:intron 30.0%
GTGGGTCTAATTTAGTAAAT+TGG - chr3_4:46897346-46897365 None:intergenic 30.0%
! AACATATAGTGTGCACTTTT+TGG + chr3_4:46897426-46897445 Msa0503580:intron 30.0%
AAAAAGGTTATAGACATGTC+TGG + chr3_4:46897644-46897663 Msa0503580:intron 30.0%
AAAAGGTTATAGACATGTCT+GGG + chr3_4:46897645-46897664 Msa0503580:intron 30.0%
AAAAATTAACCGAACATGTC+TGG + chr3_4:46897679-46897698 Msa0503580:intron 30.0%
AAAATTAACCGAACATGTCT+GGG + chr3_4:46897680-46897699 Msa0503580:intron 30.0%
GGTGAAGTTATCAACAATTT+CGG + chr3_4:46897742-46897761 Msa0503580:intron 30.0%
AAGATGATATTATAGGGACT+AGG + chr3_4:46897824-46897843 Msa0503580:intron 30.0%
AGATGATATTATAGGGACTA+GGG + chr3_4:46897825-46897844 Msa0503580:intron 30.0%
GCACATGATATGTAAGAAAT+TGG + chr3_4:46897889-46897908 Msa0503580:intron 30.0%
GTAAGAAATTGGATAAGGAT+AGG + chr3_4:46897900-46897919 Msa0503580:intron 30.0%
TACTTATCCTATCATGTGTT+TGG + chr3_4:46897943-46897962 Msa0503580:intron 30.0%
! ATTTAAAACAACCGTAACAG+AGG + chr3_4:46898188-46898207 Msa0503580:intron 30.0%
TGATTGATATTCCTCTGTTA+CGG - chr3_4:46898202-46898221 None:intergenic 30.0%
GTGAATAAGATGAACAAAGA+TGG - chr3_4:46898240-46898259 None:intergenic 30.0%
!! TTATATGTAGCTTTATCGAG+AGG - chr3_4:46898672-46898691 None:intergenic 30.0%
AGATTGAACTTTAAATCCTC+TGG - chr3_4:46898797-46898816 None:intergenic 30.0%
GATTTATATCCAATCCTCAT+CGG + chr3_4:46899656-46899675 Msa0503580:intron 30.0%
AACAAAAATAATAGCCGATG+AGG - chr3_4:46899673-46899692 None:intergenic 30.0%
!! TTATCCTGCTTTATTTCTCA+CGG - chr3_4:46899723-46899742 None:intergenic 30.0%
GCAGGATAAAACATAAACTT+TGG + chr3_4:46899734-46899753 Msa0503580:intron 30.0%
CAACAATACAATTCAAGCTT+TGG - chr3_4:46899851-46899870 None:intergenic 30.0%
CAAAGCTTGAATTGTATTGT+TGG + chr3_4:46899849-46899868 Msa0503580:intron 30.0%
CGGTGGTAAAATAAAGTTAA+CGG + chr3_4:46900128-46900147 Msa0503580:intron 30.0%
! ATGAGAGAGAACTATTGATT+AGG - chr3_4:46900372-46900391 None:intergenic 30.0%
TGTTCAGTTGAAAAATGAGA+TGG + chr3_4:46900615-46900634 Msa0503580:intron 30.0%
AAGAAAGTTTCACGTGTAAT+AGG + chr3_4:46900736-46900755 Msa0503580:intron 30.0%
! ATCAAACAACGGATTTAAGT+AGG + chr3_4:46900870-46900889 Msa0503580:intron 30.0%
AGACCAACAAAAAAACATGA+AGG - chr3_4:46901072-46901091 None:intergenic 30.0%
TCAACTCTTGAAGAGATTTA+TGG + chr3_4:46901216-46901235 Msa0503580:CDS 30.0%
AATCCGTATGAATCATACTT+GGG + chr3_4:46901241-46901260 Msa0503580:CDS 30.0%
!! AGGTATCGAAATCATTTAAG+TGG + chr3_4:46901336-46901355 Msa0503580:intron 30.0%
AATCATTTAAGTGGTAGCTT+TGG + chr3_4:46901345-46901364 Msa0503580:intron 30.0%
! TTGATTCTTATTGACTGTCA+CGG - chr3_4:46901420-46901439 None:intergenic 30.0%
AAATTGTGTGAGAGAAAAGT+TGG + chr3_4:46901582-46901601 Msa0503580:intron 30.0%
!! CACAAACATTTCTGAAACAA+AGG + chr3_4:46901988-46902007 Msa0503580:CDS 30.0%
AAATGGCATAGTTGAAATAG+TGG + chr3_4:46902042-46902061 Msa0503580:CDS 30.0%
!!! GTGCAAAAGTAGTTTTAGAA+GGG - chr3_4:46902490-46902509 None:intergenic 30.0%
!! CAAATCATTTCTGAAATCTC+TGG - chr3_4:46902866-46902885 None:intergenic 30.0%
! ATTTCAGAAATGATTTGCCA+AGG + chr3_4:46902869-46902888 Msa0503580:CDS 30.0%
AAGAAGTGGTTGCATAAATT+AGG - chr3_4:46903005-46903024 None:intergenic 30.0%
TCAAGAAGATCAATGTAAAG+TGG - chr3_4:46903060-46903079 None:intergenic 30.0%
ACTTTACATTGATCTTCTTG+AGG + chr3_4:46903059-46903078 Msa0503580:CDS 30.0%
GGTGTTTGATGAATTGAAAA+TGG + chr3_4:46903134-46903153 Msa0503580:three_prime_UTR 30.0%
! TGATGAATTGAAAATGGGTT+TGG + chr3_4:46903140-46903159 Msa0503580:three_prime_UTR 30.0%
! AATTGAAAATGGGTTTGGTT+TGG + chr3_4:46903145-46903164 Msa0503580:three_prime_UTR 30.0%
ATATGTATGATGTTGGATTG+TGG + chr3_4:46903275-46903294 Msa0503580:three_prime_UTR 30.0%
TGGAACATAACACTAACACA+TGG + chr3_4:46890720-46890739 Msa0503580:five_prime_UTR 35.0%
AATGTTCATGATGGTCTTCA+AGG - chr3_4:46890821-46890840 None:intergenic 35.0%
TGTTGGCAAATAGTATAGAC+AGG - chr3_4:46891063-46891082 None:intergenic 35.0%
AACAGTCTGACAAGTGTTTA+TGG - chr3_4:46891430-46891449 None:intergenic 35.0%
! AATTTGAAATGTGTGTCCAG+AGG + chr3_4:46891722-46891741 Msa0503580:intron 35.0%
! TATTTGAAATGTGTGTCCAG+AGG + chr3_4:46892062-46892081 Msa0503580:intron 35.0%
TATTCCTTTAGCATATCCTC+TGG - chr3_4:46892081-46892100 None:intergenic 35.0%
GAATGTATCATAGGAGAAGT+TGG + chr3_4:46892351-46892370 Msa0503580:CDS 35.0%
TGACGGTTCAAATTGAAGTT+TGG - chr3_4:46892730-46892749 None:intergenic 35.0%
TCAACTAAGTTATGCTCACA+TGG - chr3_4:46893035-46893054 None:intergenic 35.0%
!!! GTGGCTTTTTTAACGACTTT+CGG + chr3_4:46893171-46893190 Msa0503580:intron 35.0%
ATCAATTACTCGGAGACTAA+TGG - chr3_4:46893207-46893226 None:intergenic 35.0%
TCTTACTCTCTCTATTGACA+TGG - chr3_4:46893341-46893360 None:intergenic 35.0%
CAATTTGTATCCGCTATAGA+AGG - chr3_4:46893636-46893655 None:intergenic 35.0%
! ACAAATTGATATGGTGGAAG+AGG + chr3_4:46893648-46893667 Msa0503580:CDS 35.0%
ATTTCATTTAGACCTTGCAG+CGG + chr3_4:46893778-46893797 Msa0503580:intron 35.0%
! TAGAGTTTGTCTAGAATGGT+GGG - chr3_4:46894066-46894085 None:intergenic 35.0%
! ATAGAGTTTGTCTAGAATGG+TGG - chr3_4:46894067-46894086 None:intergenic 35.0%
TCGATAGAGTTTGTCTAGAA+TGG - chr3_4:46894070-46894089 None:intergenic 35.0%
ATCCTCAGATTGTGATACAT+AGG - chr3_4:46894270-46894289 None:intergenic 35.0%
TGTGTCATAGTATAAGAGCA+AGG - chr3_4:46895031-46895050 None:intergenic 35.0%
! ACTATCAAAAGGTATACCTG+TGG + chr3_4:46895050-46895069 Msa0503580:intron 35.0%
GATTGCTTCATCAACCTTTA+GGG - chr3_4:46895079-46895098 None:intergenic 35.0%
TAACATGTGTCGTAGTTCTT+TGG - chr3_4:46895147-46895166 None:intergenic 35.0%
GTAATGTACATACCAGGATT+AGG - chr3_4:46895243-46895262 None:intergenic 35.0%
GTAAGAGTAATGTACATACC+AGG - chr3_4:46895249-46895268 None:intergenic 35.0%
AGCACATAGTCAACATACTA+CGG - chr3_4:46895376-46895395 None:intergenic 35.0%
CCTAGAAAAGGAAACTGTAT+TGG - chr3_4:46895624-46895643 None:intergenic 35.0%
! CCAATACAGTTTCCTTTTCT+AGG + chr3_4:46895621-46895640 Msa0503580:intron 35.0%
GTTGTTAAAGAGCCTAGAAA+AGG - chr3_4:46895636-46895655 None:intergenic 35.0%
! TAGCCATTAAGTTGTTGACT+TGG + chr3_4:46895884-46895903 Msa0503580:intron 35.0%
GATCCAAGTCAACAACTTAA+TGG - chr3_4:46895890-46895909 None:intergenic 35.0%
! GACACCATTGAGCTTTTAAA+AGG - chr3_4:46895922-46895941 None:intergenic 35.0%
! AGGAAATTTTGAGCACTCTT+AGG - chr3_4:46896094-46896113 None:intergenic 35.0%
TCATTCTATTAGCTACACTG+AGG - chr3_4:46896174-46896193 None:intergenic 35.0%
! GTGTGGTTTCTATCTACTTT+TGG + chr3_4:46896237-46896256 Msa0503580:intron 35.0%
!!! CAAATTCCCTCTCCTTTTTT+TGG + chr3_4:46896371-46896390 Msa0503580:intron 35.0%
GATTCTCCCTCATGTTAATT+TGG + chr3_4:46896545-46896564 Msa0503580:intron 35.0%
TGTAGGATCTAATATTAGGG+AGG + chr3_4:46896710-46896729 Msa0503580:intron 35.0%
GTAGGATCTAATATTAGGGA+GGG + chr3_4:46896711-46896730 Msa0503580:intron 35.0%
TAGGATCTAATATTAGGGAG+GGG + chr3_4:46896712-46896731 Msa0503580:intron 35.0%
AGCATCCAGTGAAATTATCA+CGG + chr3_4:46896846-46896865 Msa0503580:intron 35.0%
GATTCTCCCTCATGTTATTA+TGG + chr3_4:46896871-46896890 Msa0503580:intron 35.0%
CAATATTATCCCAAGACATC+TGG + chr3_4:46896914-46896933 Msa0503580:intron 35.0%
TGGGCATACTACTATATTCT+TGG + chr3_4:46896980-46896999 Msa0503580:intron 35.0%
! AAGGTGCAATTTTGCTAACT+TGG - chr3_4:46897197-46897216 None:intergenic 35.0%
AAAAAAAAATGGCCAAGGCA+AGG + chr3_4:46897721-46897740 Msa0503580:intron 35.0%
! TAGTAAATTTAGAGCCCGTT+TGG + chr3_4:46897865-46897884 Msa0503580:intron 35.0%
TACATATCATGTGCACCAAA+CGG - chr3_4:46897883-46897902 None:intergenic 35.0%
GGATAGGATACGATAGTTAT+AGG + chr3_4:46897916-46897935 Msa0503580:intron 35.0%
GTTCATCTTATTCACACTAG+CGG + chr3_4:46898245-46898264 Msa0503580:intron 35.0%
ATAGATTCCGACAATGAGAA+TGG + chr3_4:46898722-46898741 Msa0503580:intron 35.0%
AAATAATAGCCGATGAGGAT+TGG - chr3_4:46899668-46899687 None:intergenic 35.0%
!! TATCCTGCTTTATTTCTCAC+GGG - chr3_4:46899722-46899741 None:intergenic 35.0%
AGCTTGAATTGTATTGTTGG+CGG + chr3_4:46899852-46899871 Msa0503580:intron 35.0%
TTAATCAAGTTCTTGAGCCT+TGG + chr3_4:46899965-46899984 Msa0503580:intron 35.0%
ACGTGAAACTTTCTTTCTCA+TGG - chr3_4:46900731-46900750 None:intergenic 35.0%
TAGGTTTGAGAAATCCTATC+AGG + chr3_4:46900755-46900774 Msa0503580:intron 35.0%
! ACAACGGATTTAAGTAGGAT+AGG + chr3_4:46900875-46900894 Msa0503580:intron 35.0%
!!! GGACCTTCATGTTTTTTTGT+TGG + chr3_4:46901066-46901085 Msa0503580:intron 35.0%
! AGATGAAGCAAAAGCACAAA+TGG + chr3_4:46901188-46901207 Msa0503580:CDS 35.0%
GAATCCGTATGAATCATACT+TGG + chr3_4:46901240-46901259 Msa0503580:CDS 35.0%
GTTCCCAAGTATGATTCATA+CGG - chr3_4:46901247-46901266 None:intergenic 35.0%
TATGAATCATACTTGGGAAC+CGG + chr3_4:46901247-46901266 Msa0503580:CDS 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr3_4:46901688-46901707 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr3_4:46901688-46901707 Msa0503580:intron 35.0%
ATTTCTTGCTGCAGTCAAAA+TGG - chr3_4:46902026-46902045 None:intergenic 35.0%
!!! ATTTTGACTGCAGCAAGAAA+TGG + chr3_4:46902025-46902044 Msa0503580:CDS 35.0%
! GTGGAATAGCAAATGTTTTC+AGG + chr3_4:46902321-46902340 Msa0503580:CDS 35.0%
!!! GGTGCAAAAGTAGTTTTAGA+AGG - chr3_4:46902491-46902510 None:intergenic 35.0%
!! CTAAAACTACTTTTGCACCA+TGG + chr3_4:46902492-46902511 Msa0503580:intron 35.0%
!!! TGCTGTTTCACCTTTTAAGT+TGG - chr3_4:46902563-46902582 None:intergenic 35.0%
ACTACCATCATACGCTAATT+TGG - chr3_4:46902611-46902630 None:intergenic 35.0%
TTTGCTCTGTCATCGTTAAT+CGG + chr3_4:46902778-46902797 Msa0503580:CDS 35.0%
TTCGAGAAGTGAGTATAGAA+AGG - chr3_4:46902837-46902856 None:intergenic 35.0%
TGAACATAGGTACAAACACA+TGG + chr3_4:46902975-46902994 Msa0503580:CDS 35.0%
ATAAGGGCGAGGATTTATAA+AGG + chr3_4:46903113-46903132 Msa0503580:three_prime_UTR 35.0%
TGACAGCAGCACATATATCA+CGG + chr3_4:46890864-46890883 Msa0503580:CDS 40.0%
AGTCAACAATATATCCCTCG+TGG + chr3_4:46891166-46891185 Msa0503580:intron 40.0%
AGGAAAATGGGATGAAGTTG+AGG + chr3_4:46892110-46892129 Msa0503580:CDS 40.0%
CTTAAGTCACAAGAATGAGG+AGG + chr3_4:46892254-46892273 Msa0503580:CDS 40.0%
!! TCATAGGAGAAGTTGGTGAA+AGG + chr3_4:46892358-46892377 Msa0503580:CDS 40.0%
GACAATGCAGCAAGAAACAA+AGG - chr3_4:46892423-46892442 None:intergenic 40.0%
TGTTTCTTGCTGCATTGTCT+TGG + chr3_4:46892424-46892443 Msa0503580:CDS 40.0%
ACCAAAAAATTCCCTCTGGA+TGG - chr3_4:46892547-46892566 None:intergenic 40.0%
!! GCATGATTTATCGACTTCAC+AGG + chr3_4:46892783-46892802 Msa0503580:intron 40.0%
! TTTGGAATGTCGATAAGCTC+TGG - chr3_4:46893566-46893585 None:intergenic 40.0%
ATCGACATTCCAAACAAACG+TGG + chr3_4:46893572-46893591 Msa0503580:CDS 40.0%
CTAGTAGCAAGAAGTTTGAG+AGG - chr3_4:46893605-46893624 None:intergenic 40.0%
CTCTCAAACTTCTTGCTACT+AGG + chr3_4:46893603-46893622 Msa0503580:CDS 40.0%
GCGGATACAAATTGATATGG+TGG + chr3_4:46893642-46893661 Msa0503580:CDS 40.0%
GAAATGTTTCGCACTTACAG+TGG - chr3_4:46893682-46893701 None:intergenic 40.0%
AATCACTATTAACCGCTGCA+AGG - chr3_4:46893793-46893812 None:intergenic 40.0%
! GCAGCGGTTAATAGTGATTT+TGG + chr3_4:46893794-46893813 Msa0503580:intron 40.0%
GGTCTCCTAATTGTTCAAGA+CGG - chr3_4:46894175-46894194 None:intergenic 40.0%
CTCAGATTGTGATACATAGG+AGG - chr3_4:46894267-46894286 None:intergenic 40.0%
CTCCTATGTATCACAATCTG+AGG + chr3_4:46894265-46894284 Msa0503580:intron 40.0%
TATACCTGTGGAAACCCTAA+AGG + chr3_4:46895062-46895081 Msa0503580:CDS 40.0%
CGATTGCTTCATCAACCTTT+AGG - chr3_4:46895080-46895099 None:intergenic 40.0%
CATAGTCAACATACTACGGT+AGG - chr3_4:46895372-46895391 None:intergenic 40.0%
TTAACTGACAGCATGGGTAA+CGG - chr3_4:46895845-46895864 None:intergenic 40.0%
!! GCTGCCTTTTAAAAGCTCAA+TGG + chr3_4:46895915-46895934 Msa0503580:intron 40.0%
GTGCTAGAATGTTTGACATG+TGG + chr3_4:46896044-46896063 Msa0503580:intron 40.0%
AGCACTCTTAGGAATCAGAA+CGG - chr3_4:46896083-46896102 None:intergenic 40.0%
ATTTGGGAATGTCCTTTGCA+AGG - chr3_4:46896123-46896142 None:intergenic 40.0%
TTCTATTAGCTACACTGAGG+AGG - chr3_4:46896171-46896190 None:intergenic 40.0%
TAGAAACCACACAACTGCAA+CGG - chr3_4:46896229-46896248 None:intergenic 40.0%
!! TATACTACTGGCTCTGTATC+CGG - chr3_4:46896296-46896315 None:intergenic 40.0%
ACCATCAAACCAACCTAAGT+GGG - chr3_4:46896478-46896497 None:intergenic 40.0%
ATGGTGTTTGATTGAGACCT+TGG + chr3_4:46896493-46896512 Msa0503580:intron 40.0%
GCATCCAGTGAAATTATCAC+GGG + chr3_4:46896847-46896866 Msa0503580:intron 40.0%
ATCTCCCGTGATAATTTCAC+TGG - chr3_4:46896854-46896873 None:intergenic 40.0%
CCTCTCCCATAATAACATGA+GGG - chr3_4:46896880-46896899 None:intergenic 40.0%
TCCTCTCCCATAATAACATG+AGG - chr3_4:46896881-46896900 None:intergenic 40.0%
! ATTCTTGGTCTTTCAGGAGT+TGG + chr3_4:46896995-46897014 Msa0503580:intron 40.0%
! TTGATAACTTCACCTTGCCT+TGG - chr3_4:46897736-46897755 None:intergenic 40.0%
ACATATCATGTGCACCAAAC+GGG - chr3_4:46897882-46897901 None:intergenic 40.0%
TTGTGCACCAAACACATGAT+AGG - chr3_4:46897953-46897972 None:intergenic 40.0%
TATTCACACTAGCGGAAAGA+CGG + chr3_4:46898253-46898272 Msa0503580:intron 40.0%
!! ACTTCTGAAGCACCATTGAA+TGG - chr3_4:46899944-46899963 None:intergenic 40.0%
GTTTGATCTGTTGTTAACGG+TGG + chr3_4:46900111-46900130 Msa0503580:intron 40.0%
! AACCCAAAAGTGTGCTGAAA+GGG + chr3_4:46900244-46900263 Msa0503580:intron 40.0%
GACTTTGTGTTGGATGACTT+TGG - chr3_4:46900457-46900476 None:intergenic 40.0%
TTGAAAAATGAGATGGCTCG+AGG + chr3_4:46900622-46900641 Msa0503580:intron 40.0%
TGAAAAATGAGATGGCTCGA+GGG + chr3_4:46900623-46900642 Msa0503580:intron 40.0%
TGCTAACCCACCAAAAACTA+AGG + chr3_4:46900779-46900798 Msa0503580:intron 40.0%
CCTATTGGTGCATCAAACAA+CGG + chr3_4:46900859-46900878 Msa0503580:intron 40.0%
GCAGGATAAAGAGATAGGAT+AGG - chr3_4:46900911-46900930 None:intergenic 40.0%
! AAGGTGCACTTTTGCTAACT+TGG + chr3_4:46901045-46901064 Msa0503580:intron 40.0%
! AAGCAAAAGCACAAATGGAG+TGG + chr3_4:46901193-46901212 Msa0503580:CDS 40.0%
!! TCACATCTCGTATTGGTTTG+GGG - chr3_4:46901273-46901292 None:intergenic 40.0%
!! CTCACATCTCGTATTGGTTT+GGG - chr3_4:46901274-46901293 None:intergenic 40.0%
!! ACTCACATCTCGTATTGGTT+TGG - chr3_4:46901275-46901294 None:intergenic 40.0%
AAACCAATACGAGATGTGAG+TGG + chr3_4:46901274-46901293 Msa0503580:CDS 40.0%
CGATACCTTGCTCTTGATTT+CGG - chr3_4:46901324-46901343 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr3_4:46901692-46901711 None:intergenic 40.0%
!! ATGAGTGTCGCTTTAGACTT+TGG + chr3_4:46901459-46901478 Msa0503580:intron 40.0%
TGTGAGAGAAAAGTTGGAGA+GGG + chr3_4:46901588-46901607 Msa0503580:intron 40.0%
AAAGTTGGAGAGGGTAAAGT+TGG + chr3_4:46901597-46901616 Msa0503580:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr3_4:46901692-46901711 Msa0503580:intron 40.0%
!! TTTGAAACGGAGGGAGTATT+TGG + chr3_4:46901701-46901720 Msa0503580:intron 40.0%
TGATACTTTAATCCAAGGGG+TGG + chr3_4:46902213-46902232 Msa0503580:CDS 40.0%
TTTAATCCAAGGGGTGGATA+AGG + chr3_4:46902219-46902238 Msa0503580:CDS 40.0%
TGTAGCTGCTAAATGTAGCA+CGG - chr3_4:46902254-46902273 None:intergenic 40.0%
GATCGAGATTTGAACATTCC+TGG + chr3_4:46902280-46902299 Msa0503580:CDS 40.0%
GCTATTCCACATCATTTGCA+AGG - chr3_4:46902311-46902330 None:intergenic 40.0%
ACCATGGATCAGTATACAGA+AGG + chr3_4:46902508-46902527 Msa0503580:intron 40.0%
TCCTTCTGTATACTGATCCA+TGG - chr3_4:46902512-46902531 None:intergenic 40.0%
CATGCCAAATTAGCGTATGA+TGG + chr3_4:46902604-46902623 Msa0503580:CDS 40.0%
TAGCGTATGATGGTAGTACA+TGG + chr3_4:46902614-46902633 Msa0503580:CDS 40.0%
AGAGCAAATGCATCAAATGC+AGG - chr3_4:46902766-46902785 None:intergenic 40.0%
TTTGCCAAGGAAACTTCTTG+TGG + chr3_4:46902882-46902901 Msa0503580:CDS 40.0%
TTGCCAAGGAAACTTCTTGT+GGG + chr3_4:46902883-46902902 Msa0503580:CDS 40.0%
AATCCCACAAGAAGTTTCCT+TGG - chr3_4:46902889-46902908 None:intergenic 40.0%
GGCAGTGAACATTGCAATAA+TGG - chr3_4:46902929-46902948 None:intergenic 40.0%
AAAGAAATTGCCAGAGCAGA+AGG - chr3_4:46902950-46902969 None:intergenic 40.0%
TGCCATTGCATACAAAGTCA+CGG - chr3_4:46903031-46903050 None:intergenic 40.0%
AGCAGCACATATATCACGGA+AGG + chr3_4:46890868-46890887 Msa0503580:CDS 45.0%
GTGTCCAGAGGATATGCTAA+AGG + chr3_4:46892074-46892093 Msa0503580:intron 45.0%
CTACACGTGGCAGTAAATGA+TGG + chr3_4:46892195-46892214 Msa0503580:CDS 45.0%
GGCAGTAAATGATGGCAATG+AGG + chr3_4:46892203-46892222 Msa0503580:CDS 45.0%
TGAATCCTCTTGATGCTGCA+AGG - chr3_4:46892320-46892339 None:intergenic 45.0%
!!! GCCATCCAGAGGGAATTTTT+TGG + chr3_4:46892543-46892562 Msa0503580:CDS 45.0%
GGAGTAAGTCCACGTTTGTT+TGG - chr3_4:46893584-46893603 None:intergenic 45.0%
TATCCGCTATAGAAGGCTGA+GGG - chr3_4:46893629-46893648 None:intergenic 45.0%
TAGGGCCGTCTTGAACAATT+AGG + chr3_4:46894167-46894186 Msa0503580:intron 45.0%
!! TCAACCTTTAGGGTTTCCAC+AGG - chr3_4:46895069-46895088 None:intergenic 45.0%
CACTTATACGCCTTGCTAAG+CGG + chr3_4:46895202-46895221 Msa0503580:CDS 45.0%
!! TTTCCTCTAGAGCCTTGCAA+AGG + chr3_4:46896108-46896127 Msa0503580:intron 45.0%
! AATGCACTGGTGCATAACCT+TGG + chr3_4:46896428-46896447 Msa0503580:intron 45.0%
! AACCTTGGTAGCTTGTCCAT+TGG + chr3_4:46896443-46896462 Msa0503580:intron 45.0%
TTCCAATGGACAAGCTACCA+AGG - chr3_4:46896448-46896467 None:intergenic 45.0%
! AAGTGGGCTTGTGTTTCCAA+TGG - chr3_4:46896462-46896481 None:intergenic 45.0%
TTGGAAACACAAGCCCACTT+AGG + chr3_4:46896462-46896481 Msa0503580:intron 45.0%
AAACACAAGCCCACTTAGGT+TGG + chr3_4:46896466-46896485 Msa0503580:intron 45.0%
CACCATCAAACCAACCTAAG+TGG - chr3_4:46896479-46896498 None:intergenic 45.0%
TTGAGGATGAGCATACTCCA+AGG - chr3_4:46896513-46896532 None:intergenic 45.0%
TTGGAGTATGCTCATCCTCA+AGG + chr3_4:46896512-46896531 Msa0503580:intron 45.0%
GAATCAAACCTGAGACCTTG+AGG - chr3_4:46896530-46896549 None:intergenic 45.0%
! CTCCCTCATGTTAATTTGGG+CGG + chr3_4:46896549-46896568 Msa0503580:intron 45.0%
GTCCGCCCAAATTAACATGA+GGG - chr3_4:46896554-46896573 None:intergenic 45.0%
AGTCCGCCCAAATTAACATG+AGG - chr3_4:46896555-46896574 None:intergenic 45.0%
TTGAATGGAGAGGATCTCAC+TGG - chr3_4:46896761-46896780 None:intergenic 45.0%
CCCTCATGTTATTATGGGAG+AGG + chr3_4:46896877-46896896 Msa0503580:intron 45.0%
GGACTAGGGTTGAATTTGTG+AGG + chr3_4:46897839-46897858 Msa0503580:intron 45.0%
ATTCACACTAGCGGAAAGAC+GGG + chr3_4:46898254-46898273 Msa0503580:intron 45.0%
! CCACGACATGTTTTCAGTCA+TGG - chr3_4:46898699-46898718 None:intergenic 45.0%
CCATGACTGAAAACATGTCG+TGG + chr3_4:46898696-46898715 Msa0503580:intron 45.0%
AGACCCGTGAGAAATAAAGC+AGG + chr3_4:46899716-46899735 Msa0503580:intron 45.0%
GCGGAAAGTAAATTGCTCGA+AGG + chr3_4:46899871-46899890 Msa0503580:intron 45.0%
AGGTGATGAGATGTGATCAG+AGG + chr3_4:46900006-46900025 Msa0503580:intron 45.0%
GGTGATGAGATGTGATCAGA+GGG + chr3_4:46900007-46900026 Msa0503580:intron 45.0%
!! CTTTCAGCACACTTTTGGGT+TGG - chr3_4:46900245-46900264 None:intergenic 45.0%
! CAACCCAAAAGTGTGCTGAA+AGG + chr3_4:46900243-46900262 Msa0503580:intron 45.0%
! ACCCAAAAGTGTGCTGAAAG+GGG + chr3_4:46900245-46900264 Msa0503580:intron 45.0%
! ACCCCTTTCAGCACACTTTT+GGG - chr3_4:46900249-46900268 None:intergenic 45.0%
! TACCCCTTTCAGCACACTTT+TGG - chr3_4:46900250-46900269 None:intergenic 45.0%
GCACTTCAGTGACTTTGTGT+TGG - chr3_4:46900467-46900486 None:intergenic 45.0%
TAGTGTAGTGGCAGTTCGAT+TGG + chr3_4:46900689-46900708 Msa0503580:intron 45.0%
AGTGTAGTGGCAGTTCGATT+GGG + chr3_4:46900690-46900709 Msa0503580:intron 45.0%
CCGTTGTTTGATGCACCAAT+AGG - chr3_4:46900862-46900881 None:intergenic 45.0%
!! ATGTCTATAGTTTGGTGCGC+AGG - chr3_4:46900929-46900948 None:intergenic 45.0%
GTTCCACTCACATCTCGTAT+TGG - chr3_4:46901280-46901299 None:intergenic 45.0%
TACAGCCGAAATCAAGAGCA+AGG + chr3_4:46901316-46901335 Msa0503580:CDS 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr3_4:46901691-46901710 None:intergenic 45.0%
GTGTGAGAGAAAAGTTGGAG+AGG + chr3_4:46901587-46901606 Msa0503580:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr3_4:46901691-46901710 Msa0503580:intron 45.0%
CAAGAGAACCAATGTCGTTG+AGG + chr3_4:46902147-46902166 Msa0503580:CDS 45.0%
CCTTAATGCCTCAACGACAT+TGG - chr3_4:46902158-46902177 None:intergenic 45.0%
! CCAATGTCGTTGAGGCATTA+AGG + chr3_4:46902155-46902174 Msa0503580:CDS 45.0%
!! TCTGAGATTTTGCGTGCGTT+TGG - chr3_4:46902387-46902406 None:intergenic 45.0%
TGATGGTAGTACATGGCTGA+AGG + chr3_4:46902621-46902640 Msa0503580:CDS 45.0%
CCATTGCATACAAAGTCACG+GGG - chr3_4:46903029-46903048 None:intergenic 45.0%
GCCATTGCATACAAAGTCAC+GGG - chr3_4:46903030-46903049 None:intergenic 45.0%
!! TTAGTAAAAAAAAAATTAAA+TGG - chr3_4:46895438-46895457 None:intergenic 5.0%
!!! ATTTTTTAAAAAAATCATTT+AGG + chr3_4:46897567-46897586 Msa0503580:intron 5.0%
!!! TTTTTTAAAAAAATCATTTA+GGG + chr3_4:46897568-46897587 Msa0503580:intron 5.0%
TAGAGGAACAGCACTACACG+TGG + chr3_4:46892182-46892201 Msa0503580:CDS 50.0%
CTTGATGCTGCAAGGTGCAA+AGG - chr3_4:46892312-46892331 None:intergenic 50.0%
TTGCACCTTGCAGCATCAAG+AGG + chr3_4:46892312-46892331 Msa0503580:CDS 50.0%
TTCTTCACTGTGCCATCCAG+AGG + chr3_4:46892532-46892551 Msa0503580:CDS 50.0%
TCTTCACTGTGCCATCCAGA+GGG + chr3_4:46892533-46892552 Msa0503580:CDS 50.0%
GTATCCGCTATAGAAGGCTG+AGG - chr3_4:46893630-46893649 None:intergenic 50.0%
CGCTTAGCAAGGCGTATAAG+TGG - chr3_4:46895204-46895223 None:intergenic 50.0%
! TGTCCTTTGCAAGGCTCTAG+AGG - chr3_4:46896114-46896133 None:intergenic 50.0%
AACCACACAACTGCAACGGT+TGG - chr3_4:46896225-46896244 None:intergenic 50.0%
!! GCCCACTTAGGTTGGTTTGA+TGG + chr3_4:46896474-46896493 Msa0503580:intron 50.0%
ATGCTCATCCTCAAGGTCTC+AGG + chr3_4:46896519-46896538 Msa0503580:intron 50.0%
AGGGGATTCTCTCCTATGAC+TGG + chr3_4:46896730-46896749 Msa0503580:intron 50.0%
TCACTGGACTCTCCAGTCAT+AGG - chr3_4:46896745-46896764 None:intergenic 50.0%
GGAAGATGCCCAGATGTCTT+GGG - chr3_4:46896926-46896945 None:intergenic 50.0%
TGGAAGATGCCCAGATGTCT+TGG - chr3_4:46896927-46896946 None:intergenic 50.0%
CAACTCTGCAAGTTCACTCG+TGG - chr3_4:46897535-46897554 None:intergenic 50.0%
TAACCGAACATGTCTGGGCA+AGG + chr3_4:46897685-46897704 Msa0503580:intron 50.0%
GATCCTTGCCCAGACATGTT+CGG - chr3_4:46897691-46897710 None:intergenic 50.0%
AGTAGAAAGAGCGGACAGAC+GGG - chr3_4:46898290-46898309 None:intergenic 50.0%
CAGTAGAAAGAGCGGACAGA+CGG - chr3_4:46898291-46898310 None:intergenic 50.0%
CGTTAGCGCAGTAGAAAGAG+CGG - chr3_4:46898299-46898318 None:intergenic 50.0%
GGGCAGACCATTCTCATTGT+CGG - chr3_4:46898732-46898751 None:intergenic 50.0%
GTGTAGTGGCAGTTCGATTG+GGG + chr3_4:46900691-46900710 Msa0503580:intron 50.0%
!! TGGTGGGTTAGCAACCTGAT+AGG - chr3_4:46900772-46900791 None:intergenic 50.0%
GGTGCGCAGGATAAAGAGAT+AGG - chr3_4:46900916-46900935 None:intergenic 50.0%
!! ATCTCGTATTGGTTTGGGGC+CGG - chr3_4:46901269-46901288 None:intergenic 50.0%
TCTCTTCCTTATCCACCCCT+TGG - chr3_4:46902228-46902247 None:intergenic 50.0%
ATCATTTGCAAGGCAGCTCC+AGG - chr3_4:46902301-46902320 None:intergenic 50.0%
GAGCTGCCTTGCAAATGATG+TGG + chr3_4:46902302-46902321 Msa0503580:CDS 50.0%
TGATGCAGCAAAGGAAACGC+CGG - chr3_4:46902686-46902705 None:intergenic 50.0%
CACAGTGCTTGATGCAGCAA+AGG - chr3_4:46902695-46902714 None:intergenic 50.0%
CGAAACAGGTGAACCAGCAT+TGG + chr3_4:46902732-46902751 Msa0503580:CDS 50.0%
! ACAGGTGAACCAGCATTGGA+AGG + chr3_4:46902736-46902755 Msa0503580:CDS 50.0%
ATGTTCACTGCCTTCTGCTC+TGG + chr3_4:46902937-46902956 Msa0503580:CDS 50.0%
CAAAGTCACGGGGAAAGAAG+TGG - chr3_4:46903019-46903038 None:intergenic 50.0%
CCCCGTGACTTTGTATGCAA+TGG + chr3_4:46903026-46903045 Msa0503580:CDS 50.0%
! CACTTGTCTTCGCGGCATTT+TGG - chr3_4:46903093-46903112 None:intergenic 50.0%
TGCCGCGAAGACAAGTGATA+AGG + chr3_4:46903096-46903115 Msa0503580:three_prime_UTR 50.0%
GCCGCGAAGACAAGTGATAA+GGG + chr3_4:46903097-46903116 Msa0503580:three_prime_UTR 50.0%
GCCCTTATCACTTGTCTTCG+CGG - chr3_4:46903101-46903120 None:intergenic 50.0%
GAAGACAAGTGATAAGGGCG+AGG + chr3_4:46903102-46903121 Msa0503580:three_prime_UTR 50.0%
AGGCCCTCAGCCTTCTATAG+CGG + chr3_4:46893623-46893642 Msa0503580:CDS 55.0%
CTGCGGAAGGAACCTAATCC+TGG + chr3_4:46895228-46895247 Msa0503580:CDS 55.0%
GTCCAACCGTTGCAGTTGTG+TGG + chr3_4:46896220-46896239 Msa0503580:intron 55.0%
GCAGAGACAGAGGTAGGAGT+CGG + chr3_4:46900645-46900664 Msa0503580:intron 55.0%
GTTGTAGCAGCACTCCTTGC+CGG + chr3_4:46902664-46902683 Msa0503580:CDS 55.0%
! TGCTGCATCAAGCACTGTGC+CGG + chr3_4:46902696-46902715 Msa0503580:CDS 55.0%
GTTTCGCTTCTGTTGCCACC+CGG - chr3_4:46902718-46902737 None:intergenic 55.0%
GGTGGCAACAGAAGCGAAAC+AGG + chr3_4:46902718-46902737 Msa0503580:CDS 55.0%
GCAGGCTTTCCTTCCAATGC+TGG - chr3_4:46902748-46902767 None:intergenic 55.0%
TCGAGGGCAGAGACAGAGGT+AGG + chr3_4:46900639-46900658 Msa0503580:intron 60.0%
CAGCAAAGGAAACGCCGGCA+AGG - chr3_4:46902681-46902700 None:intergenic 60.0%
! GCTGCATCAAGCACTGTGCC+GGG + chr3_4:46902697-46902716 Msa0503580:CDS 60.0%
CGCGCTCACGAACACCACGA+GGG - chr3_4:46891183-46891202 None:intergenic 65.0%
GCCTTGCTAAGCGGCTGCTG+CGG + chr3_4:46895211-46895230 Msa0503580:CDS 65.0%
TCCGCAGCAGCCGCTTAGCA+AGG - chr3_4:46895215-46895234 None:intergenic 65.0%
TGCTAAGCGGCTGCTGCGGA+AGG + chr3_4:46895215-46895234 Msa0503580:CDS 65.0%
TGGCTCGAGGGCAGAGACAG+AGG + chr3_4:46900635-46900654 Msa0503580:intron 65.0%
! GCATCAAGCACTGTGCCGGG+TGG + chr3_4:46902700-46902719 Msa0503580:CDS 65.0%
GCGCGCTCACGAACACCACG+AGG - chr3_4:46891184-46891203 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 46890685 46903355 46890685 ID=Msa0503580;Name=Msa0503580
chr3_4 mRNA 46890685 46903355 46890685 ID=Msa0503580-mRNA-1;Parent=Msa0503580;Name=Msa0503580-mRNA-1;_AED=0.08;_eAED=0.08;_QI=147|0.83|1|1|0.83|0.85|7|266|665
chr3_4 exon 46890685 46890889 46890685 ID=Msa0503580-mRNA-1:exon:10024;Parent=Msa0503580-mRNA-1
chr3_4 exon 46892082 46892564 46892082 ID=Msa0503580-mRNA-1:exon:10025;Parent=Msa0503580-mRNA-1
chr3_4 exon 46893534 46893683 46893534 ID=Msa0503580-mRNA-1:exon:10026;Parent=Msa0503580-mRNA-1
chr3_4 exon 46895061 46895249 46895061 ID=Msa0503580-mRNA-1:exon:10027;Parent=Msa0503580-mRNA-1
chr3_4 exon 46901170 46901337 46901170 ID=Msa0503580-mRNA-1:exon:10028;Parent=Msa0503580-mRNA-1
chr3_4 exon 46901963 46902342 46901963 ID=Msa0503580-mRNA-1:exon:10029;Parent=Msa0503580-mRNA-1
chr3_4 exon 46902520 46903355 46902520 ID=Msa0503580-mRNA-1:exon:10030;Parent=Msa0503580-mRNA-1
chr3_4 five_prime_UTR 46890685 46890831 46890685 ID=Msa0503580-mRNA-1:five_prime_utr;Parent=Msa0503580-mRNA-1
chr3_4 CDS 46890832 46890889 46890832 ID=Msa0503580-mRNA-1:cds;Parent=Msa0503580-mRNA-1
chr3_4 CDS 46892082 46892564 46892082 ID=Msa0503580-mRNA-1:cds;Parent=Msa0503580-mRNA-1
chr3_4 CDS 46893534 46893683 46893534 ID=Msa0503580-mRNA-1:cds;Parent=Msa0503580-mRNA-1
chr3_4 CDS 46895061 46895249 46895061 ID=Msa0503580-mRNA-1:cds;Parent=Msa0503580-mRNA-1
chr3_4 CDS 46901170 46901337 46901170 ID=Msa0503580-mRNA-1:cds;Parent=Msa0503580-mRNA-1
chr3_4 CDS 46901963 46902342 46901963 ID=Msa0503580-mRNA-1:cds;Parent=Msa0503580-mRNA-1
chr3_4 CDS 46902520 46903089 46902520 ID=Msa0503580-mRNA-1:cds;Parent=Msa0503580-mRNA-1
chr3_4 three_prime_UTR 46903090 46903355 46903090 ID=Msa0503580-mRNA-1:three_prime_utr;Parent=Msa0503580-mRNA-1
Gene Sequence

>Msa0503580

ATGAACATTATAGAATTGGGAGACTATATTAGTGACAGCAGCACATATATCACGGAAGAGGATATGCTAAAGGAATATACATTAGAAGGAAAATGGGATGAAGTTGAGGAATTATACAAATCTGATCATAAGTTTAGCACAATAGTGATCAACAAAAGTAGAGGAACAGCACTACACGTGGCAGTAAATGATGGCAATGAGGAAGTTGTTAAAAATCTTGTGAATTCAATCTTAAGTCACAAGAATGAGGAGGCCCTTACATGTAAGAATGAAAAAGGTGACACTCCTTTGCACCTTGCAGCATCAAGAGGATTCAAAGATATATGTGAATGTATCATAGGAGAAGTTGGTGAAAGGAAGTATCTGATTGATATTCATAACGAAAATGGAGAAAGTCCTTTGTTTCTTGCTGCATTGTCTTGGCAAAAACAAACGTTTGTGTATCTCTTCCACTTTTATAGGAACTATTCTTATACTAGAGATCTTATTAGAAGCAATGGGGATAGTATTCTTCACTGTGCCATCCAGAGGGAATTTTTTGATTTGGCGCTTATAATAATACATAAATATCCAGAGCTTATCGACATTCCAAACAAACGTGGACTTACTCCTCTCAAACTTCTTGCTACTAGGCCCTCAGCCTTCTATAGCGGATACAAATTGATATGGTGGAAGAGGATTCTTTACCACTGTATACCTGTGGAAACCCTAAAGGTTGATGAAGCAATCGAATATTATCGGCAGAAGCATGAGTCAAAACCACAAAAATTATGTCCAAAGAACTACGACACATGTTATCTCTTTCTTCATAAATGTCGAGAATTTGCTTATCCACTTATACGCCTTGCTAAGCGGCTGCTGCGGAAGGAACCTAATCCTGGGGTTGAAGAAATTAAAAAGATGAAGCAAAAGCACAAATGGAGTGGTCAACTCTTGAAGAGATTTATGGAGAATCCGTATGAATCATACTTGGGAACCGGCCCCAAACCAATACGAGATGTGAGTGGAACAGATTTTGTGTTTGCTTACAGCCGAAATCAAGAGCAAGCAAAAATGAAACTTGCAAGTGATGACACAAACATTTCTGAAACAAAGGAAAATGAGACGACCATTTTGACTGCAGCAAGAAATGGCATAGTTGAAATAGTGGAAAAGCTTATAACAAAAGTACCAAGTTCGATATATGATGTTAACATCGAAAATAAAAATGTATTGCATGTGGCAGTTGAGAACAAGAGAACCAATGTCGTTGAGGCATTAAGGAAACATTTTGAAAAGTGCTATAAAGAGGCAACATTTGATACTTTAATCCAAGGGGTGGATAAGGAAGAGAACACCGTGCTACATTTAGCAGCTACAAGAAGTGATCGAGATTTGAACATTCCTGGAGCTGCCTTGCAAATGATGTGGAATAGCAAATGTTTTCAGTATACAGAAGGACTAGTGCCAGAGTATTTCAAAATTAGAACCAACTTAAAAGGTGAAACAGCAGAAGAATTATTCAAAAATTCGCATGCCAAATTAGCGTATGATGGTAGTACATGGCTGAAGGAAACTTCTGAATCTTGCTCTGTTGTAGCAGCACTCCTTGCCGGCGTTTCCTTTGCTGCATCAAGCACTGTGCCGGGTGGCAACAGAAGCGAAACAGGTGAACCAGCATTGGAAGGAAAGCCTGCATTTGATGCATTTGCTCTGTCATCGTTAATCGGTCTTTGTTTCTCTCTCACTGCACTCATAATGTTCCTTTCTATACTCACTTCTCGAAAAGAAGCCAGAGATTTCAGAAATGATTTGCCAAGGAAACTTCTTGTGGGATTAAGTTCTCTTTTCTTGTCCATTATTGCAATGTTCACTGCCTTCTGCTCTGGCAATTTCTTTTTGATTGAACATAGGTACAAACACATGGTGTTCCTAATTTATGCAACCACTTCTTTCCCCGTGACTTTGTATGCAATGGCACAACTTCCACTTTACATTGATCTTCTTGAGGTATTGTAA
Protein sequence

>Msa0503580

MNIIELGDYISDSSTYITEEDMLKEYTLEGKWDEVEELYKSDHKFSTIVINKSRGTALHVAVNDGNEEVVKNLVNSILSHKNEEALTCKNEKGDTPLHLAASRGFKDICECIIGEVGERKYLIDIHNENGESPLFLAALSWQKQTFVYLFHFYRNYSYTRDLIRSNGDSILHCAIQREFFDLALIIIHKYPELIDIPNKRGLTPLKLLATRPSAFYSGYKLIWWKRILYHCIPVETLKVDEAIEYYRQKHESKPQKLCPKNYDTCYLFLHKCREFAYPLIRLAKRLLRKEPNPGVEEIKKMKQKHKWSGQLLKRFMENPYESYLGTGPKPIRDVSGTDFVFAYSRNQEQAKMKLASDDTNISETKENETTILTAARNGIVEIVEKLITKVPSSIYDVNIENKNVLHVAVENKRTNVVEALRKHFEKCYKEATFDTLIQGVDKEENTVLHLAATRSDRDLNIPGAALQMMWNSKCFQYTEGLVPEYFKIRTNLKGETAEELFKNSHAKLAYDGSTWLKETSESCSVVAALLAGVSFAASSTVPGGNRSETGEPALEGKPAFDAFALSSLIGLCFSLTALIMFLSILTSRKEARDFRNDLPRKLLVGLSSLFLSIIAMFTAFCSGNFFLIEHRYKHMVFLIYATTSFPVTLYAMAQLPLYIDLLEVL*