AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1227970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1227970 MtrunA17_Chr8g0334671 93.125 320 11 5 1 318 1 311 0.0 577
Msa1227970 MtrunA17_Chr8g0360361 70.000 90 26 1 192 281 63 151 1.29e-35 127
Msa1227970 MtrunA17_Chr4g0046991 72.619 84 22 1 186 268 64 147 2.50e-35 125
Msa1227970 MtrunA17_Chr1g0194121 48.649 148 63 3 121 268 87 221 3.32e-35 135
Msa1227970 MtrunA17_Chr2g0302791 52.419 124 53 2 154 277 104 221 8.32e-35 134
Msa1227970 MtrunA17_Chr7g0231911 67.857 84 27 0 187 270 142 225 1.43e-34 128
Msa1227970 MtrunA17_Chr3g0122411 54.472 123 49 2 154 269 118 240 8.16e-34 129
Msa1227970 MtrunA17_Chr2g0282521 67.470 83 27 0 186 268 56 138 2.28e-33 120
Msa1227970 MtrunA17_Chr4g0061651 70.370 81 24 0 189 269 118 198 2.78e-33 128
Msa1227970 MtrunA17_Chr7g0270541 49.624 133 59 2 136 268 95 219 3.17e-33 130
Msa1227970 MtrunA17_Chr2g0308321 72.368 76 21 0 194 269 171 246 3.29e-33 129
Msa1227970 MtrunA17_Chr5g0420051 61.458 96 33 1 174 269 165 256 3.55e-33 127
Msa1227970 MtrunA17_Chr7g0258471 67.857 84 27 0 184 267 132 215 3.64e-33 127
Msa1227970 MtrunA17_Chr1g0162871 55.000 120 43 1 150 269 71 179 7.95e-33 129
Msa1227970 MtrunA17_Chr8g0386271 55.752 113 46 1 157 269 66 174 8.08e-32 122
Msa1227970 MtrunA17_Chr3g0132091 68.421 76 24 0 194 269 73 148 2.56e-30 118
Msa1227970 MtrunA17_Chr7g0224821 62.651 83 31 0 189 271 72 154 8.32e-30 117
Msa1227970 MtrunA17_Chr8g0377401 50.442 113 51 2 154 266 127 234 1.04e-27 108
Msa1227970 MtrunA17_Chr8g0377421 45.902 122 53 2 158 267 85 205 9.57e-26 104
Msa1227970 MtrunA17_Chr2g0286661 58.108 74 31 0 194 267 103 176 6.81e-24 102
Msa1227970 MtrunA17_Chr2g0317041 66.102 59 20 0 182 240 87 145 2.36e-21 89.0
Msa1227970 MtrunA17_Chr1g0175031 43.434 99 43 1 155 240 22 120 6.11e-19 82.0
Msa1227970 MtrunA17_Chr8g0377431 57.143 56 24 0 192 247 149 204 1.28e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1227970 AT1G02065.1 44.611 334 147 9 1 318 1 312 2.64e-80 248
Msa1227970 AT1G02065.2 43.600 250 117 5 1 241 1 235 7.34e-59 190
Msa1227970 AT1G69170.1 53.543 127 52 3 141 267 78 197 1.97e-34 130
Msa1227970 AT1G20980.1 57.627 118 49 1 154 271 81 197 4.11e-34 133
Msa1227970 AT1G27370.6 47.368 152 59 3 134 269 105 251 4.48e-34 128
Msa1227970 AT1G27370.1 47.368 152 59 3 134 269 105 251 7.75e-34 129
Msa1227970 AT1G27370.5 47.368 152 59 3 134 269 105 251 7.75e-34 129
Msa1227970 AT1G27370.3 47.368 152 59 3 134 269 105 251 7.75e-34 129
Msa1227970 AT1G27370.2 47.368 152 59 3 134 269 105 251 7.75e-34 129
Msa1227970 AT1G27370.4 47.368 152 59 3 134 269 105 251 7.75e-34 129
Msa1227970 AT1G27370.7 47.368 152 59 3 134 269 105 251 7.75e-34 129
Msa1227970 AT2G47070.1 73.333 75 20 0 194 268 106 180 2.99e-33 130
Msa1227970 AT1G76580.2 71.250 80 23 0 190 269 110 189 3.37e-33 130
Msa1227970 AT3G60030.1 54.545 121 44 3 153 273 96 205 3.73e-33 130
Msa1227970 AT1G76580.3 71.250 80 23 0 190 269 110 189 3.99e-33 130
Msa1227970 AT1G76580.1 71.250 80 23 0 190 269 110 189 5.28e-33 130
Msa1227970 AT2G33810.1 67.073 82 27 0 187 268 47 128 6.24e-33 119
Msa1227970 AT5G43270.3 53.125 128 43 3 154 267 118 242 1.34e-32 125
Msa1227970 AT5G43270.1 53.125 128 43 3 154 267 118 242 1.34e-32 125
Msa1227970 AT5G43270.2 53.125 128 43 3 154 267 118 242 1.34e-32 125
Msa1227970 AT1G53160.3 60.606 99 35 2 179 273 35 133 2.54e-32 119
Msa1227970 AT1G53160.2 62.766 94 31 2 184 273 40 133 4.57e-32 118
Msa1227970 AT1G53160.1 62.766 94 31 2 184 273 40 133 4.57e-32 118
Msa1227970 AT3G57920.1 56.140 114 44 2 156 269 27 134 8.00e-32 122
Msa1227970 AT1G27360.2 50.781 128 53 2 152 269 123 250 3.76e-31 121
Msa1227970 AT1G27360.1 50.781 128 53 2 152 269 123 250 3.76e-31 121
Msa1227970 AT1G27360.3 50.781 128 53 2 152 269 123 250 3.76e-31 121
Msa1227970 AT1G27360.4 50.781 128 53 2 152 269 123 250 3.76e-31 121
Msa1227970 AT5G50570.1 60.714 84 33 0 186 269 93 176 5.71e-30 117
Msa1227970 AT5G50570.2 60.714 84 33 0 186 269 93 176 5.71e-30 117
Msa1227970 AT5G50670.1 60.714 84 33 0 186 269 93 176 5.71e-30 117
Msa1227970 AT5G50670.2 60.714 84 33 0 186 269 93 176 5.71e-30 117
Msa1227970 AT2G42200.1 66.667 78 26 0 192 269 72 149 1.17e-29 117
Msa1227970 AT3G15270.1 62.667 75 28 0 194 268 63 137 7.13e-29 110
Msa1227970 AT5G18830.2 46.316 95 51 0 173 267 117 211 2.61e-22 98.2
Msa1227970 AT5G18830.1 46.316 95 51 0 173 267 117 211 2.78e-22 98.2
Msa1227970 AT5G18830.3 46.316 95 51 0 173 267 117 211 3.23e-22 98.2
Msa1227970 AT2G47070.2 72.549 51 14 0 218 268 1 51 9.30e-19 87.8

Find 149 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTAATTAATTTCTTCT+TGG 0.199513 8_2:+3415669 None:intergenic
CTGTTAACATCCTCGGATTT+TGG 0.206559 8_2:+3417220 None:intergenic
CAAATTAAATTAAATTAAAC+TGG 0.232500 8_2:+3415720 None:intergenic
GCTTAAAATGAAATTAATAT+TGG 0.246621 8_2:+3415574 None:intergenic
TTGTGAATATCTTGAGTATT+TGG 0.246735 8_2:+3416128 None:intergenic
CTTGAAGTTGTTGAAGGGCT+TGG 0.266098 8_2:+3415823 None:intergenic
GGAGTTGTTGTCTTCATTTC+CGG 0.269715 8_2:+3417588 None:intergenic
CTCTCCCTTGACCCTCTTCC+TGG 0.270502 8_2:-3417280 Msa1227970:CDS
TCCAAGAAGAAATTAATTAA+TGG 0.276446 8_2:-3415670 Msa1227970:three_prime_UTR
CTTCTATCTGAGTTTGATAA+TGG 0.278524 8_2:-3416212 Msa1227970:CDS
ATCACAACCTGCTGCATTGC+TGG 0.295297 8_2:+3416927 None:intergenic
CCTAATTTGCAGAAAAGTTA+TGG 0.306031 8_2:+3417782 None:intergenic
TCTAGAGCCCACGAAGTCTA+TGG 0.307240 8_2:+3417195 None:intergenic
CCGGTAAGCATGATGTTTGT+TGG 0.322804 8_2:+3417607 None:intergenic
GCAGCCACCGTCGTTGCAGC+TGG 0.327647 8_2:-3416968 Msa1227970:CDS
TTGAAGTTGTTGAAGGGCTT+GGG 0.330690 8_2:+3415824 None:intergenic
CTTAAAATGAAATTAATATT+GGG 0.344072 8_2:+3415575 None:intergenic
TTCAAACTCGCCTCGGTGTC+AGG 0.349519 8_2:-3417068 Msa1227970:CDS
CCAACAAACATCATGCTTAC+CGG 0.358315 8_2:-3417607 Msa1227970:CDS
GGCTAAACTGGTTGTGGTGG+TGG 0.358538 8_2:+3417416 None:intergenic
TGTGAATATCTTGAGTATTT+GGG 0.361532 8_2:+3416129 None:intergenic
TGAAATTAATATTGGGAGAA+AGG 0.370310 8_2:+3415582 None:intergenic
TTGTTGAAGGGCTTGGGCTT+TGG 0.370317 8_2:+3415830 None:intergenic
GAAGGATCCCCGCCAGAGTC+TGG 0.374246 8_2:-3415919 Msa1227970:intron
TCGGTCTAGACCACCTGAAC+CGG 0.380874 8_2:-3417104 Msa1227970:CDS
GGAGGTTGTGGTTGAGGTGG+AGG 0.381025 8_2:+3417310 None:intergenic
TTTGCAGAAAAGTTATGGTT+GGG 0.382180 8_2:+3417787 None:intergenic
GAACCTGTCGAACCCGGTTC+AGG 0.386586 8_2:+3417091 None:intergenic
ATGGAAGGAGGTTGTGGTTG+AGG 0.388721 8_2:+3417304 None:intergenic
TTATCCGACAACTACCTTAA+CGG 0.399307 8_2:-3417499 Msa1227970:CDS
AATTTGACGGTGGGCTTGAT+CGG 0.400326 8_2:+3417549 None:intergenic
CGGTAAGCATGATGTTTGTT+GGG 0.413507 8_2:+3417608 None:intergenic
TACCTTAACGGACCTGGTGC+TGG 0.415148 8_2:-3417487 Msa1227970:CDS
TGCAACGACGGTGGCTGCCT+TGG 0.421484 8_2:+3416973 None:intergenic
TTACTACTTGTTAGTAAGAA+AGG 0.422025 8_2:-3415529 Msa1227970:three_prime_UTR
TAAACTGGTTGTGGTGGTGG+TGG 0.427802 8_2:+3417419 None:intergenic
CGAAGAAGGACTGATGGATA+TGG 0.430604 8_2:+3417377 None:intergenic
GAGAGCATGGAAGGAGGTTG+TGG 0.432257 8_2:+3417298 None:intergenic
TCACAAATCTCACAATACTT+TGG 0.434049 8_2:-3416111 Msa1227970:CDS
ACTGATGGATATGGTGCTGC+TGG 0.447816 8_2:+3417386 None:intergenic
ATTGAGCTTGAAGTTGTTGA+AGG 0.454327 8_2:+3415817 None:intergenic
GACAGTGGCGGTTTCTCCAC+CGG 0.454790 8_2:-3415875 Msa1227970:CDS
TATGGTGCTGCTGGGCCTGT+GGG 0.461581 8_2:+3417395 None:intergenic
GTCCAGCACCAGGTCCGTTA+AGG 0.461905 8_2:+3417485 None:intergenic
CTTGACCCTCTTCCTGGTCA+TGG 0.462725 8_2:-3417274 Msa1227970:CDS
GAGACATGTTGGACTATGAA+TGG 0.466941 8_2:-3417636 Msa1227970:exon
TTAATTTAATTTAATTTGCA+TGG 0.478477 8_2:-3415715 Msa1227970:three_prime_UTR
ATATGGTGCTGCTGGGCCTG+TGG 0.478517 8_2:+3417394 None:intergenic
TTTGGTACAAGGAGGAATCC+AGG 0.480794 8_2:+3417238 None:intergenic
CATGGACATGGACATGGCCC+TGG 0.481738 8_2:-3417256 Msa1227970:CDS
GACTTCGTGGGCTCTAGACT+TGG 0.484947 8_2:-3417190 Msa1227970:CDS
CCACCTGAACCGGGTTCGAC+AGG 0.485330 8_2:-3417094 Msa1227970:CDS
ATCGGAGGCTGCTGCTGCGG+CGG 0.485623 8_2:+3417567 None:intergenic
TTGCAATGCTGATCTATCTC+AGG 0.487614 8_2:-3417038 Msa1227970:CDS
AGACATGTTGGACTATGAAT+GGG 0.488109 8_2:-3417635 Msa1227970:exon
TATCAAACTCAGATAGAAGA+TGG 0.491198 8_2:+3416216 None:intergenic
GGTTCTGCCAGCAATGCAGC+AGG 0.491828 8_2:-3416934 Msa1227970:intron
ATTTGCAGAAAAGTTATGGT+TGG 0.492281 8_2:+3417786 None:intergenic
GGGTCAAGGGAGAGCATGGA+AGG 0.493307 8_2:+3417289 None:intergenic
ATTGAGTTCCAGACTCTGGC+GGG 0.495092 8_2:+3415911 None:intergenic
TAGATCAGCATTGCAACCTT+CGG 0.495851 8_2:+3417045 None:intergenic
CCTCTTCCTGGTCATGGACA+TGG 0.496987 8_2:-3417268 Msa1227970:CDS
ACCCACGGGCTTTCCATGGT+GGG 0.498666 8_2:-3417354 Msa1227970:CDS
GCGGCTCACGAAGTCGTCTT+CGG 0.499397 8_2:+3417135 None:intergenic
ATCAGTCCTTCTTCGACCCA+CGG 0.500041 8_2:-3417369 Msa1227970:CDS
CCTGGTCATGGACATGGACA+TGG 0.500096 8_2:-3417262 Msa1227970:CDS
TTCTTTCTAGAGAGACATGT+TGG 0.501123 8_2:-3417647 Msa1227970:exon
CACAAACTTTGTGGCGGCGG+TGG 0.502474 8_2:+3417005 None:intergenic
GAAAACAGTGTGTAATGTAA+TGG 0.504055 8_2:+3417846 None:intergenic
TTGCAGAAAAGTTATGGTTG+GGG 0.507975 8_2:+3417788 None:intergenic
AAGAGGGTCAAGGGAGAGCA+TGG 0.508675 8_2:+3417285 None:intergenic
GAAGGAGGTTGTGGTTGAGG+TGG 0.517345 8_2:+3417307 None:intergenic
TCAGTCCTTCTTCGACCCAC+GGG 0.517839 8_2:-3417368 Msa1227970:CDS
GACCCACGGGCTTTCCATGG+TGG 0.520528 8_2:-3417355 Msa1227970:CDS
GTGGTCTAGACCGACGGTAA+AGG 0.522892 8_2:+3417113 None:intergenic
CCAATGTGTAGCTATTAACT+AGG 0.525271 8_2:-3415758 Msa1227970:three_prime_UTR
CCTGTGGGCTAAACTGGTTG+TGG 0.528281 8_2:+3417410 None:intergenic
AGTGAAACTCACAAACTTTG+TGG 0.531020 8_2:+3416996 None:intergenic
TTTGAAGAACCTGTCGAACC+CGG 0.531837 8_2:+3417085 None:intergenic
TCTAGACTTGGACTCAACCT+TGG 0.532282 8_2:-3417178 Msa1227970:CDS
ACGTAGCTGCAGGAAGAGAT+TGG 0.533276 8_2:-3416186 Msa1227970:CDS
TCGATGGTGGGTCCAGCACC+AGG 0.535316 8_2:+3417475 None:intergenic
AGGTCCGTTAAGGTAGTTGT+CGG 0.538800 8_2:+3417495 None:intergenic
ATCACCACTGTTTATGTCGA+TGG 0.538976 8_2:+3417459 None:intergenic
ATCTACATCGTCGGTGACAG+TGG 0.539420 8_2:-3415890 Msa1227970:CDS
GACCTTTGTCGAAAATAATC+CGG 0.539450 8_2:+3415856 None:intergenic
TTGATCGGAGGCTGCTGCTG+CGG 0.542405 8_2:+3417564 None:intergenic
GTGGGCTAAACTGGTTGTGG+TGG 0.546991 8_2:+3417413 None:intergenic
TATGGGTCTGTTAACATCCT+CGG 0.547316 8_2:+3417213 None:intergenic
CCATGTCCATGTCCATGACC+AGG 0.547483 8_2:+3417262 None:intergenic
AGTCAACCCAGCTGCAACGA+CGG 0.547853 8_2:+3416961 None:intergenic
CAGCCACCGTCGTTGCAGCT+GGG 0.549496 8_2:-3416967 Msa1227970:CDS
CCATGTCCATGACCAGGAAG+AGG 0.550701 8_2:+3417268 None:intergenic
ATAATGGAAAACGTAGCTGC+AGG 0.553645 8_2:-3416196 Msa1227970:CDS
CTGATGGATATGGTGCTGCT+GGG 0.553703 8_2:+3417387 None:intergenic
CAGGTTCTTCAAACTCGCCT+CGG 0.554504 8_2:-3417075 Msa1227970:CDS
TTGAGCTTGAAGTTGTTGAA+GGG 0.561199 8_2:+3415818 None:intergenic
TAACAGACCCATAGACTTCG+TGG 0.562712 8_2:-3417203 Msa1227970:CDS
ACTCACAAACTTTGTGGCGG+CGG 0.568304 8_2:+3417002 None:intergenic
GTGGTCGAAAATTTGACGGT+GGG 0.570524 8_2:+3417540 None:intergenic
CGTAGTGGTCGAAAATTTGA+CGG 0.570580 8_2:+3417536 None:intergenic
CATGACCAGGAAGAGGGTCA+AGG 0.572330 8_2:+3417275 None:intergenic
GACAACTACCTTAACGGACC+TGG 0.572506 8_2:-3417493 Msa1227970:CDS
TCGTGAGCCGCCTTTACCGT+CGG 0.573246 8_2:-3417123 Msa1227970:CDS
TGCAGAAAAGTTATGGTTGG+GGG 0.578722 8_2:+3417789 None:intergenic
GTAGATTGAGTTCCAGACTC+TGG 0.579544 8_2:+3415907 None:intergenic
AAGAAGAAATTAATTAATGG+AGG 0.580037 8_2:-3415667 Msa1227970:three_prime_UTR
GAGGTTGTGGTTGAGGTGGA+GGG 0.580574 8_2:+3417311 None:intergenic
ATGACCAGGAAGAGGGTCAA+GGG 0.581128 8_2:+3417276 None:intergenic
CCACAACCAGTTTAGCCCAC+AGG 0.583382 8_2:-3417410 Msa1227970:CDS
ACCACTGTTTATGTCGATGG+TGG 0.584036 8_2:+3417462 None:intergenic
GTGGGTCGAAGAAGGACTGA+TGG 0.584810 8_2:+3417371 None:intergenic
CCTGTCGAACCCGGTTCAGG+TGG 0.588152 8_2:+3417094 None:intergenic
TGGCTGATCATAATCGTCGC+AGG 0.588393 8_2:-3416166 Msa1227970:CDS
CGGTCTAGACCACCTGAACC+GGG 0.589283 8_2:-3417103 Msa1227970:CDS
AGAAGTATGTGCGGCCACCA+AGG 0.589908 8_2:+3417161 None:intergenic
CCTAGTTAATAGCTACACAT+TGG 0.594646 8_2:+3415758 None:intergenic
CCACTGTTTATGTCGATGGT+GGG 0.597970 8_2:+3417463 None:intergenic
TTGGTACAAGGAGGAATCCA+GGG 0.599525 8_2:+3417239 None:intergenic
AGACTTGGACTCAACCTTGG+TGG 0.599617 8_2:-3417175 Msa1227970:CDS
TTGACGGTGGGCTTGATCGG+AGG 0.603910 8_2:+3417552 None:intergenic
AAATTAAATTAAATTAAACT+GGG 0.605549 8_2:+3415721 None:intergenic
TTGCAGCTGGGTTGACTCAG+CGG 0.610713 8_2:-3416955 Msa1227970:CDS
TCAAGGGAGAGCATGGAAGG+AGG 0.612363 8_2:+3417292 None:intergenic
GTCTAGACCGACGGTAAAGG+CGG 0.615862 8_2:+3417116 None:intergenic
TAATTAATGGAGGAGCGTCA+CGG 0.616625 8_2:-3415657 Msa1227970:three_prime_UTR
AGTTTGTGAGTTTCACTCCA+AGG 0.619014 8_2:-3416990 Msa1227970:CDS
TACATCGTCGGTGACAGTGG+CGG 0.620396 8_2:-3415887 Msa1227970:CDS
CATGTCCATGACCAGGAAGA+GGG 0.620462 8_2:+3417269 None:intergenic
GATTGAGTTCCAGACTCTGG+CGG 0.626944 8_2:+3415910 None:intergenic
AAGCAGTTGATGACCCACCA+TGG 0.631764 8_2:+3417341 None:intergenic
TGGAACTCAATCTACATCGT+CGG 0.632089 8_2:-3415899 Msa1227970:CDS
AACAGACCCATAGACTTCGT+GGG 0.640045 8_2:-3417202 Msa1227970:CDS
CAACCCAGCTGCAACGACGG+TGG 0.640932 8_2:+3416964 None:intergenic
GTTCAGGTGGTCTAGACCGA+CGG 0.647783 8_2:+3417107 None:intergenic
GCGTACGTAGGTTCACTACC+CGG 0.662915 8_2:+3415783 None:intergenic
CCTCCTTGTACCAAAATCCG+AGG 0.665794 8_2:-3417230 Msa1227970:CDS
ACCCACCATGGAAAGCCCGT+GGG 0.668555 8_2:+3417353 None:intergenic
AGTGGTCGAAAATTTGACGG+TGG 0.671593 8_2:+3417539 None:intergenic
ACATAGCTTGAGAAGCGTAG+TGG 0.674169 8_2:+3417521 None:intergenic
TACACATTGGTTGCGTACGT+AGG 0.676582 8_2:+3415771 None:intergenic
GACATGTTGGACTATGAATG+GGG 0.677368 8_2:-3417634 Msa1227970:CDS
GAAACTCACAAACTTTGTGG+CGG 0.681714 8_2:+3416999 None:intergenic
CTTTGTCGAAAATAATCCGG+TGG 0.682961 8_2:+3415859 None:intergenic
CAACCTTCGGCCTGACACCG+AGG 0.715496 8_2:+3417058 None:intergenic
TTGAGTTCCAGACTCTGGCG+GGG 0.723001 8_2:+3415912 None:intergenic
CTTCGGAAGAGAAGTATGTG+CGG 0.729099 8_2:+3417152 None:intergenic
CCCACCATCGACATAAACAG+TGG 0.734841 8_2:-3417463 Msa1227970:CDS
TACGTAGGTTCACTACCCGG+TGG 0.763199 8_2:+3415786 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATATATATGC+AGG - chr8_2:3417196-3417215 Msa1227970:CDS 10.0%
!! CAAATTAAATTAAATTAAAC+TGG + chr8_2:3417720-3417739 None:intergenic 10.0%
!!! TTAATTTAATTTAATTTGCA+TGG - chr8_2:3417722-3417741 Msa1227970:intron 10.0%
!! CTTAAAATGAAATTAATATT+GGG + chr8_2:3417865-3417884 None:intergenic 10.0%
!!! TAAAAGTCATTCTTTATTTT+TGG + chr8_2:3415710-3415729 None:intergenic 15.0%
!! ATTCTATTTAACCAAAAATA+AGG - chr8_2:3417442-3417461 Msa1227970:CDS 15.0%
!! TTCTATTTAACCAAAAATAA+GGG - chr8_2:3417443-3417462 Msa1227970:CDS 15.0%
!!! TGATTTGTTTTTTATTTTGA+AGG - chr8_2:3417500-3417519 Msa1227970:CDS 15.0%
!! GCTTAAAATGAAATTAATAT+TGG + chr8_2:3417866-3417885 None:intergenic 15.0%
!!! TGAGTTAGGTTTTAATTAAA+CGG - chr8_2:3416703-3416722 Msa1227970:intron 20.0%
!! AAAATACACATCTTAATCAA+AGG + chr8_2:3416767-3416786 None:intergenic 20.0%
!!! TTTGATTAAGATGTGTATTT+TGG - chr8_2:3416766-3416785 Msa1227970:intron 20.0%
!!! TTGATTAAGATGTGTATTTT+GGG - chr8_2:3416767-3416786 Msa1227970:intron 20.0%
!! TTGATTAAGAAAATTACTTG+TGG + chr8_2:3417361-3417380 None:intergenic 20.0%
!! TCCAAGAAGAAATTAATTAA+TGG - chr8_2:3417767-3417786 Msa1227970:intron 20.0%
!! TCCATTAATTAATTTCTTCT+TGG + chr8_2:3417771-3417790 None:intergenic 20.0%
!! AAGAAGAAATTAATTAATGG+AGG - chr8_2:3417770-3417789 Msa1227970:intron 20.0%
!!! AAGTCATTCTTTATTTTTGG+AGG + chr8_2:3415707-3415726 None:intergenic 25.0%
!! TGATTTTCATTTCATTTCAC+AGG - chr8_2:3415753-3415772 Msa1227970:three_prime_UTR 25.0%
!! TCAATGATTGAGTTGTTAAA+GGG + chr8_2:3416555-3416574 None:intergenic 25.0%
!!! TTTAATTTGCACTTATGGTA+TGG + chr8_2:3416653-3416672 None:intergenic 25.0%
!!! TGTTGTTTAATTTGCACTTA+TGG + chr8_2:3416658-3416677 None:intergenic 25.0%
!! AACTTGTGTTAATTTGAGTT+AGG - chr8_2:3416689-3416708 Msa1227970:intron 25.0%
!!! GTGAGTAGTATATGTTTTAA+GGG + chr8_2:3416961-3416980 None:intergenic 25.0%
!! AGTGAGTAGTATATGTTTTA+AGG + chr8_2:3416962-3416981 None:intergenic 25.0%
! TGTGAATATCTTGAGTATTT+GGG + chr8_2:3417311-3417330 None:intergenic 25.0%
! TTGTGAATATCTTGAGTATT+TGG + chr8_2:3417312-3417331 None:intergenic 25.0%
!!! ATAAGTAACTCCCTTATTTT+TGG + chr8_2:3417456-3417475 None:intergenic 25.0%
! ACTTATCATAAGCATGATTA+TGG - chr8_2:3417470-3417489 Msa1227970:CDS 25.0%
! TGAAATTAATATTGGGAGAA+AGG + chr8_2:3417858-3417877 None:intergenic 25.0%
!! TTACTACTTGTTAGTAAGAA+AGG - chr8_2:3417908-3417927 Msa1227970:five_prime_UTR 25.0%
GAAAACAGTGTGTAATGTAA+TGG + chr8_2:3415594-3415613 None:intergenic 30.0%
TTTGCAGAAAAGTTATGGTT+GGG + chr8_2:3415653-3415672 None:intergenic 30.0%
ATTTGCAGAAAAGTTATGGT+TGG + chr8_2:3415654-3415673 None:intergenic 30.0%
! CCTAATTTGCAGAAAAGTTA+TGG + chr8_2:3415658-3415677 None:intergenic 30.0%
! CCATAACTTTTCTGCAAATT+AGG - chr8_2:3415655-3415674 Msa1227970:three_prime_UTR 30.0%
! ACTTTTCTGCAAATTAGGTT+AGG - chr8_2:3415660-3415679 Msa1227970:three_prime_UTR 30.0%
! CTTTTCTGCAAATTAGGTTA+GGG - chr8_2:3415661-3415680 Msa1227970:three_prime_UTR 30.0%
! CAATGATTGAGTTGTTAAAG+GGG + chr8_2:3416554-3416573 None:intergenic 30.0%
! CTCAATGATTGAGTTGTTAA+AGG + chr8_2:3416556-3416575 None:intergenic 30.0%
!!! GGTTTTAAAAACGTGTATGA+GGG - chr8_2:3416788-3416807 Msa1227970:intron 30.0%
AAGGTTGGATTCAAAAAAGA+CGG - chr8_2:3416858-3416877 Msa1227970:intron 30.0%
!! TACTACTCACTTAGTTTGTT+TGG - chr8_2:3416971-3416990 Msa1227970:CDS 30.0%
TATCAAACTCAGATAGAAGA+TGG + chr8_2:3417224-3417243 None:intergenic 30.0%
CTTCTATCTGAGTTTGATAA+TGG - chr8_2:3417225-3417244 Msa1227970:CDS 30.0%
TCACAAATCTCACAATACTT+TGG - chr8_2:3417326-3417345 Msa1227970:CDS 30.0%
TTGCAGAAAAGTTATGGTTG+GGG + chr8_2:3415652-3415671 None:intergenic 35.0%
! TTCTTTCTAGAGAGACATGT+TGG - chr8_2:3415790-3415809 Msa1227970:exon 35.0%
AGACATGTTGGACTATGAAT+GGG - chr8_2:3415802-3415821 Msa1227970:CDS 35.0%
TTATCCGACAACTACCTTAA+CGG - chr8_2:3415938-3415957 Msa1227970:intron 35.0%
AGTGAAACTCACAAACTTTG+TGG + chr8_2:3416444-3416463 None:intergenic 35.0%
!! TATTTTTGTGCCTCACTTCA+AGG - chr8_2:3416587-3416606 Msa1227970:intron 35.0%
! ATTTTTGTGCCTCACTTCAA+GGG - chr8_2:3416588-3416607 Msa1227970:intron 35.0%
!!! GGGTTTTAAAAACGTGTATG+AGG - chr8_2:3416787-3416806 Msa1227970:intron 35.0%
!!! GCTGTGTTGTTTTGTTTGAA+TGG + chr8_2:3417056-3417075 None:intergenic 35.0%
GACCTTTGTCGAAAATAATC+CGG + chr8_2:3417584-3417603 None:intergenic 35.0%
TTGAGCTTGAAGTTGTTGAA+GGG + chr8_2:3417622-3417641 None:intergenic 35.0%
ATTGAGCTTGAAGTTGTTGA+AGG + chr8_2:3417623-3417642 None:intergenic 35.0%
CCTAGTTAATAGCTACACAT+TGG + chr8_2:3417682-3417701 None:intergenic 35.0%
CCAATGTGTAGCTATTAACT+AGG - chr8_2:3417679-3417698 Msa1227970:intron 35.0%
TGCAGAAAAGTTATGGTTGG+GGG + chr8_2:3415651-3415670 None:intergenic 40.0%
GAGACATGTTGGACTATGAA+TGG - chr8_2:3415801-3415820 Msa1227970:CDS 40.0%
GACATGTTGGACTATGAATG+GGG - chr8_2:3415803-3415822 Msa1227970:CDS 40.0%
CGGTAAGCATGATGTTTGTT+GGG + chr8_2:3415832-3415851 None:intergenic 40.0%
CCAACAAACATCATGCTTAC+CGG - chr8_2:3415830-3415849 Msa1227970:CDS 40.0%
GGAGTTGTTGTCTTCATTTC+CGG + chr8_2:3415852-3415871 None:intergenic 40.0%
CGTAGTGGTCGAAAATTTGA+CGG + chr8_2:3415904-3415923 None:intergenic 40.0%
ATCACCACTGTTTATGTCGA+TGG + chr8_2:3415981-3416000 None:intergenic 40.0%
! CTGTTAACATCCTCGGATTT+TGG + chr8_2:3416220-3416239 None:intergenic 40.0%
TATGGGTCTGTTAACATCCT+CGG + chr8_2:3416227-3416246 None:intergenic 40.0%
TAGATCAGCATTGCAACCTT+CGG + chr8_2:3416395-3416414 None:intergenic 40.0%
TTGCAATGCTGATCTATCTC+AGG - chr8_2:3416399-3416418 Msa1227970:intron 40.0%
GAAACTCACAAACTTTGTGG+CGG + chr8_2:3416441-3416460 None:intergenic 40.0%
AGTTTGTGAGTTTCACTCCA+AGG - chr8_2:3416447-3416466 Msa1227970:intron 40.0%
AGTAAGCAAGCACAAAACAG+CGG - chr8_2:3416817-3416836 Msa1227970:intron 40.0%
AAAAGACGGAAATACCCTTG+AGG - chr8_2:3416872-3416891 Msa1227970:intron 40.0%
AAAGACGGAAATACCCTTGA+GGG - chr8_2:3416873-3416892 Msa1227970:intron 40.0%
! TGAGTTGACCGTACATTACA+TGG - chr8_2:3416912-3416931 Msa1227970:intron 40.0%
GAGTTGACCGTACATTACAT+GGG - chr8_2:3416913-3416932 Msa1227970:intron 40.0%
AGTTGACCGTACATTACATG+GGG - chr8_2:3416914-3416933 Msa1227970:intron 40.0%
GGATTTCCCCATGTAATGTA+CGG + chr8_2:3416923-3416942 None:intergenic 40.0%
! ATAATGGAAAACGTAGCTGC+AGG - chr8_2:3417241-3417260 Msa1227970:CDS 40.0%
TGGAACTCAATCTACATCGT+CGG - chr8_2:3417538-3417557 Msa1227970:CDS 40.0%
CTTTGTCGAAAATAATCCGG+TGG + chr8_2:3417581-3417600 None:intergenic 40.0%
! CACCGGATTATTTTCGACAA+AGG - chr8_2:3417579-3417598 Msa1227970:CDS 40.0%
TTGAAGTTGTTGAAGGGCTT+GGG + chr8_2:3417616-3417635 None:intergenic 40.0%
! AGCTCAATGTTTTTCTCCAC+CGG - chr8_2:3417635-3417654 Msa1227970:exon 40.0%
!! TAATTAATGGAGGAGCGTCA+CGG - chr8_2:3417780-3417799 Msa1227970:intron 40.0%
CCGGTAAGCATGATGTTTGT+TGG + chr8_2:3415833-3415852 None:intergenic 45.0%
! AATTTGACGGTGGGCTTGAT+CGG + chr8_2:3415891-3415910 None:intergenic 45.0%
GTGGTCGAAAATTTGACGGT+GGG + chr8_2:3415900-3415919 None:intergenic 45.0%
AGTGGTCGAAAATTTGACGG+TGG + chr8_2:3415901-3415920 None:intergenic 45.0%
! ACATAGCTTGAGAAGCGTAG+TGG + chr8_2:3415919-3415938 None:intergenic 45.0%
AGGTCCGTTAAGGTAGTTGT+CGG + chr8_2:3415945-3415964 None:intergenic 45.0%
CCACTGTTTATGTCGATGGT+GGG + chr8_2:3415977-3415996 None:intergenic 45.0%
ACCACTGTTTATGTCGATGG+TGG + chr8_2:3415978-3415997 None:intergenic 45.0%
! CGAAGAAGGACTGATGGATA+TGG + chr8_2:3416063-3416082 None:intergenic 45.0%
TTGGTACAAGGAGGAATCCA+GGG + chr8_2:3416201-3416220 None:intergenic 45.0%
TTTGGTACAAGGAGGAATCC+AGG + chr8_2:3416202-3416221 None:intergenic 45.0%
!! CATCCTCGGATTTTGGTACA+AGG + chr8_2:3416213-3416232 None:intergenic 45.0%
TAACAGACCCATAGACTTCG+TGG - chr8_2:3416234-3416253 Msa1227970:intron 45.0%
AACAGACCCATAGACTTCGT+GGG - chr8_2:3416235-3416254 Msa1227970:intron 45.0%
TCTAGACTTGGACTCAACCT+TGG - chr8_2:3416259-3416278 Msa1227970:intron 45.0%
! CTTCGGAAGAGAAGTATGTG+CGG + chr8_2:3416288-3416307 None:intergenic 45.0%
TTTGAAGAACCTGTCGAACC+CGG + chr8_2:3416355-3416374 None:intergenic 45.0%
ACGAAAATGCCCTTGAAGTG+AGG + chr8_2:3416600-3416619 None:intergenic 45.0%
AAGCACAAAACAGCGGTGTT+GGG - chr8_2:3416824-3416843 Msa1227970:intron 45.0%
AAGACGGAAATACCCTTGAG+GGG - chr8_2:3416874-3416893 Msa1227970:intron 45.0%
ATTGTCAACTCTCCCCTCAA+GGG + chr8_2:3416889-3416908 None:intergenic 45.0%
ATTACATGGGGAAATCCCGA+GGG - chr8_2:3416926-3416945 Msa1227970:intron 45.0%
TTAAGGGACACAAATGCCCT+CGG + chr8_2:3416945-3416964 None:intergenic 45.0%
GTAGATTGAGTTCCAGACTC+TGG + chr8_2:3417533-3417552 None:intergenic 45.0%
CTTGAAGTTGTTGAAGGGCT+TGG + chr8_2:3417617-3417636 None:intergenic 45.0%
! GCTCAATGTTTTTCTCCACC+GGG - chr8_2:3417636-3417655 Msa1227970:exon 45.0%
! TACACATTGGTTGCGTACGT+AGG + chr8_2:3417669-3417688 None:intergenic 45.0%
!!! TTTTTATTTTTTTATCAAAA+AGG - chr8_2:3416740-3416759 Msa1227970:intron 5.0%
!! AAATAATAATAATAATATAG+TGG + chr8_2:3417120-3417139 None:intergenic 5.0%
!! AAATTAAATTAAATTAAACT+GGG + chr8_2:3417719-3417738 None:intergenic 5.0%
! GACAACTACCTTAACGGACC+TGG - chr8_2:3415944-3415963 Msa1227970:intron 50.0%
CCCACCATCGACATAAACAG+TGG - chr8_2:3415974-3415993 Msa1227970:intron 50.0%
!! TAAACTGGTTGTGGTGGTGG+TGG + chr8_2:3416021-3416040 None:intergenic 50.0%
!! CTGATGGATATGGTGCTGCT+GGG + chr8_2:3416053-3416072 None:intergenic 50.0%
!! ACTGATGGATATGGTGCTGC+TGG + chr8_2:3416054-3416073 None:intergenic 50.0%
ATCAGTCCTTCTTCGACCCA+CGG - chr8_2:3416068-3416087 Msa1227970:intron 50.0%
!! AAGCAGTTGATGACCCACCA+TGG + chr8_2:3416099-3416118 None:intergenic 50.0%
ATGGAAGGAGGTTGTGGTTG+AGG + chr8_2:3416136-3416155 None:intergenic 50.0%
ATGACCAGGAAGAGGGTCAA+GGG + chr8_2:3416164-3416183 None:intergenic 50.0%
CATGTCCATGACCAGGAAGA+GGG + chr8_2:3416171-3416190 None:intergenic 50.0%
!! CCTCGGATTTTGGTACAAGG+AGG + chr8_2:3416210-3416229 None:intergenic 50.0%
CCTCCTTGTACCAAAATCCG+AGG - chr8_2:3416207-3416226 Msa1227970:CDS 50.0%
CTAGAGCCCACGAAGTCTAT+GGG + chr8_2:3416244-3416263 None:intergenic 50.0%
! TCTAGAGCCCACGAAGTCTA+TGG + chr8_2:3416245-3416264 None:intergenic 50.0%
AGACTTGGACTCAACCTTGG+TGG - chr8_2:3416262-3416281 Msa1227970:intron 50.0%
CAGGTTCTTCAAACTCGCCT+CGG - chr8_2:3416362-3416381 Msa1227970:intron 50.0%
ACTCACAAACTTTGTGGCGG+CGG + chr8_2:3416438-3416457 None:intergenic 50.0%
ATCACAACCTGCTGCATTGC+TGG + chr8_2:3416513-3416532 None:intergenic 50.0%
CAAGCACAAAACAGCGGTGT+TGG - chr8_2:3416823-3416842 Msa1227970:intron 50.0%
! AGCACAAAACAGCGGTGTTG+GGG - chr8_2:3416825-3416844 Msa1227970:intron 50.0%
CATTGTCAACTCTCCCCTCA+AGG + chr8_2:3416890-3416909 None:intergenic 50.0%
CATTACATGGGGAAATCCCG+AGG - chr8_2:3416925-3416944 Msa1227970:intron 50.0%
TAAGGGACACAAATGCCCTC+GGG + chr8_2:3416944-3416963 None:intergenic 50.0%
ACGTAGCTGCAGGAAGAGAT+TGG - chr8_2:3417251-3417270 Msa1227970:CDS 50.0%
TGGCTGATCATAATCGTCGC+AGG - chr8_2:3417271-3417290 Msa1227970:CDS 50.0%
ATTGAGTTCCAGACTCTGGC+GGG + chr8_2:3417529-3417548 None:intergenic 50.0%
GATTGAGTTCCAGACTCTGG+CGG + chr8_2:3417530-3417549 None:intergenic 50.0%
ATCTACATCGTCGGTGACAG+TGG - chr8_2:3417547-3417566 Msa1227970:CDS 50.0%
TTGTTGAAGGGCTTGGGCTT+TGG + chr8_2:3417610-3417629 None:intergenic 50.0%
! TACCTTAACGGACCTGGTGC+TGG - chr8_2:3415950-3415969 Msa1227970:intron 55.0%
GGCTAAACTGGTTGTGGTGG+TGG + chr8_2:3416024-3416043 None:intergenic 55.0%
! GTGGGCTAAACTGGTTGTGG+TGG + chr8_2:3416027-3416046 None:intergenic 55.0%
! CCTGTGGGCTAAACTGGTTG+TGG + chr8_2:3416030-3416049 None:intergenic 55.0%
CCACAACCAGTTTAGCCCAC+AGG - chr8_2:3416027-3416046 Msa1227970:intron 55.0%
GTGGGTCGAAGAAGGACTGA+TGG + chr8_2:3416069-3416088 None:intergenic 55.0%
TCAGTCCTTCTTCGACCCAC+GGG - chr8_2:3416069-3416088 Msa1227970:intron 55.0%
GAGGTTGTGGTTGAGGTGGA+GGG + chr8_2:3416129-3416148 None:intergenic 55.0%
GAAGGAGGTTGTGGTTGAGG+TGG + chr8_2:3416133-3416152 None:intergenic 55.0%
! GAGAGCATGGAAGGAGGTTG+TGG + chr8_2:3416142-3416161 None:intergenic 55.0%
! TCAAGGGAGAGCATGGAAGG+AGG + chr8_2:3416148-3416167 None:intergenic 55.0%
AAGAGGGTCAAGGGAGAGCA+TGG + chr8_2:3416155-3416174 None:intergenic 55.0%
CATGACCAGGAAGAGGGTCA+AGG + chr8_2:3416165-3416184 None:intergenic 55.0%
CTTGACCCTCTTCCTGGTCA+TGG - chr8_2:3416163-3416182 Msa1227970:CDS 55.0%
CCATGTCCATGACCAGGAAG+AGG + chr8_2:3416172-3416191 None:intergenic 55.0%
CCTCTTCCTGGTCATGGACA+TGG - chr8_2:3416169-3416188 Msa1227970:CDS 55.0%
CCATGTCCATGTCCATGACC+AGG + chr8_2:3416178-3416197 None:intergenic 55.0%
CCTGGTCATGGACATGGACA+TGG - chr8_2:3416175-3416194 Msa1227970:CDS 55.0%
!! GACTTCGTGGGCTCTAGACT+TGG - chr8_2:3416247-3416266 Msa1227970:intron 55.0%
! AGAAGTATGTGCGGCCACCA+AGG + chr8_2:3416279-3416298 None:intergenic 55.0%
GTCTAGACCGACGGTAAAGG+CGG + chr8_2:3416324-3416343 None:intergenic 55.0%
GTGGTCTAGACCGACGGTAA+AGG + chr8_2:3416327-3416346 None:intergenic 55.0%
GTTCAGGTGGTCTAGACCGA+CGG + chr8_2:3416333-3416352 None:intergenic 55.0%
TCGGTCTAGACCACCTGAAC+CGG - chr8_2:3416333-3416352 Msa1227970:intron 55.0%
!! TTCAAACTCGCCTCGGTGTC+AGG - chr8_2:3416369-3416388 Msa1227970:intron 55.0%
AGTCAACCCAGCTGCAACGA+CGG + chr8_2:3416479-3416498 None:intergenic 55.0%
! TTGCAGCTGGGTTGACTCAG+CGG - chr8_2:3416482-3416501 Msa1227970:intron 55.0%
! GCACAAAACAGCGGTGTTGG+GGG - chr8_2:3416826-3416845 Msa1227970:intron 55.0%
! AAACAGCGGTGTTGGGGGAT+AGG - chr8_2:3416831-3416850 Msa1227970:intron 55.0%
! AACAGCGGTGTTGGGGGATA+GGG - chr8_2:3416832-3416851 Msa1227970:intron 55.0%
TTGAGTTCCAGACTCTGGCG+GGG + chr8_2:3417528-3417547 None:intergenic 55.0%
TACATCGTCGGTGACAGTGG+CGG - chr8_2:3417550-3417569 Msa1227970:CDS 55.0%
TACGTAGGTTCACTACCCGG+TGG + chr8_2:3417654-3417673 None:intergenic 55.0%
GCGTACGTAGGTTCACTACC+CGG + chr8_2:3417657-3417676 None:intergenic 55.0%
TTGATCGGAGGCTGCTGCTG+CGG + chr8_2:3415876-3415895 None:intergenic 60.0%
! TTGACGGTGGGCTTGATCGG+AGG + chr8_2:3415888-3415907 None:intergenic 60.0%
GTCCAGCACCAGGTCCGTTA+AGG + chr8_2:3415955-3415974 None:intergenic 60.0%
!! TATGGTGCTGCTGGGCCTGT+GGG + chr8_2:3416045-3416064 None:intergenic 60.0%
!! ATATGGTGCTGCTGGGCCTG+TGG + chr8_2:3416046-3416065 None:intergenic 60.0%
GAAAGCCCGTGGGTCGAAGA+AGG + chr8_2:3416077-3416096 None:intergenic 60.0%
TTCGACCCACGGGCTTTCCA+TGG - chr8_2:3416079-3416098 Msa1227970:intron 60.0%
ACCCACGGGCTTTCCATGGT+GGG - chr8_2:3416083-3416102 Msa1227970:intron 60.0%
ACCCACCATGGAAAGCCCGT+GGG + chr8_2:3416087-3416106 None:intergenic 60.0%
GGAGGTTGTGGTTGAGGTGG+AGG + chr8_2:3416130-3416149 None:intergenic 60.0%
! GGGTCAAGGGAGAGCATGGA+AGG + chr8_2:3416151-3416170 None:intergenic 60.0%
CTCTCCCTTGACCCTCTTCC+TGG - chr8_2:3416157-3416176 Msa1227970:CDS 60.0%
CATGGACATGGACATGGCCC+TGG - chr8_2:3416181-3416200 Msa1227970:CDS 60.0%
GCGGCTCACGAAGTCGTCTT+CGG + chr8_2:3416305-3416324 None:intergenic 60.0%
TCGTGAGCCGCCTTTACCGT+CGG - chr8_2:3416314-3416333 Msa1227970:intron 60.0%
CGGTCTAGACCACCTGAACC+GGG - chr8_2:3416334-3416353 Msa1227970:intron 60.0%
GAACCTGTCGAACCCGGTTC+AGG + chr8_2:3416349-3416368 None:intergenic 60.0%
CACAAACTTTGTGGCGGCGG+TGG + chr8_2:3416435-3416454 None:intergenic 60.0%
GGTTCTGCCAGCAATGCAGC+AGG - chr8_2:3416503-3416522 Msa1227970:intron 60.0%
! ACAGCGGTGTTGGGGGATAG+GGG - chr8_2:3416833-3416852 Msa1227970:intron 60.0%
GTGTTGGGGGATAGGGGAGA+AGG - chr8_2:3416839-3416858 Msa1227970:intron 60.0%
TGGGGGATAGGGGAGAAGGT+TGG - chr8_2:3416843-3416862 Msa1227970:intron 60.0%
GACAGTGGCGGTTTCTCCAC+CGG - chr8_2:3417562-3417581 Msa1227970:CDS 60.0%
!! TCGATGGTGGGTCCAGCACC+AGG + chr8_2:3415965-3415984 None:intergenic 65.0%
! GCTGGGCCTGTGGGCTAAAC+TGG + chr8_2:3416036-3416055 None:intergenic 65.0%
GACCCACGGGCTTTCCATGG+TGG - chr8_2:3416082-3416101 Msa1227970:intron 65.0%
GACCCACCATGGAAAGCCCG+TGG + chr8_2:3416088-3416107 None:intergenic 65.0%
CCTGTCGAACCCGGTTCAGG+TGG + chr8_2:3416346-3416365 None:intergenic 65.0%
CCACCTGAACCGGGTTCGAC+AGG - chr8_2:3416343-3416362 Msa1227970:intron 65.0%
CAACCTTCGGCCTGACACCG+AGG + chr8_2:3416382-3416401 None:intergenic 65.0%
TGCAACGACGGTGGCTGCCT+TGG + chr8_2:3416467-3416486 None:intergenic 65.0%
CAGCCACCGTCGTTGCAGCT+GGG - chr8_2:3416470-3416489 Msa1227970:intron 65.0%
CAACCCAGCTGCAACGACGG+TGG + chr8_2:3416476-3416495 None:intergenic 65.0%
GAAGGATCCCCGCCAGAGTC+TGG - chr8_2:3417518-3417537 Msa1227970:CDS 65.0%
ATCGGAGGCTGCTGCTGCGG+CGG + chr8_2:3415873-3415892 None:intergenic 70.0%
!! TCGCCTCGGTGTCAGGCCGA+AGG - chr8_2:3416376-3416395 Msa1227970:intron 70.0%
GCAGCCACCGTCGTTGCAGC+TGG - chr8_2:3416469-3416488 Msa1227970:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 3415498 3417961 3415498 ID=Msa1227970;Name=Msa1227970
chr8_2 mRNA 3415498 3417961 3415498 ID=Msa1227970-mRNA-1;Parent=Msa1227970;Name=Msa1227970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=210|1|1|1|0.66|0.5|4|300|334
chr8_2 exon 3415498 3415937 3415498 ID=Msa1227970-mRNA-1:exon:1082;Parent=Msa1227970-mRNA-1
chr8_2 exon 3416096 3416241 3416096 ID=Msa1227970-mRNA-1:exon:1081;Parent=Msa1227970-mRNA-1
chr8_2 exon 3416935 3417684 3416935 ID=Msa1227970-mRNA-1:exon:1080;Parent=Msa1227970-mRNA-1
chr8_2 exon 3417783 3417961 3417783 ID=Msa1227970-mRNA-1:exon:1079;Parent=Msa1227970-mRNA-1
chr8_2 five_prime_UTR 3417783 3417961 3417783 ID=Msa1227970-mRNA-1:five_prime_utr;Parent=Msa1227970-mRNA-1
chr8_2 five_prime_UTR 3417654 3417684 3417654 ID=Msa1227970-mRNA-1:five_prime_utr;Parent=Msa1227970-mRNA-1
chr8_2 CDS 3416935 3417653 3416935 ID=Msa1227970-mRNA-1:cds;Parent=Msa1227970-mRNA-1
chr8_2 CDS 3416096 3416241 3416096 ID=Msa1227970-mRNA-1:cds;Parent=Msa1227970-mRNA-1
chr8_2 CDS 3415798 3415937 3415798 ID=Msa1227970-mRNA-1:cds;Parent=Msa1227970-mRNA-1
chr8_2 three_prime_UTR 3415498 3415797 3415498 ID=Msa1227970-mRNA-1:three_prime_utr;Parent=Msa1227970-mRNA-1
Gene Sequence

>Msa1227970

ATGTTGGACTATGAATGGGGTAACCCAACAAACATCATGCTTACCGGAAATGAAGACAACAACTCCGCCGCAGCAGCAGCCTCCGATCAAGCCCACCGTCAAATTTTCGACCACTACGCTTCTCAAGCTATGTTATCCGACAACTACCTTAACGGACCTGGTGCTGGACCCACCATCGACATAAACAGTGGTGATTTTACTCATCATAATCACCACCACCACCACAACCAGTTTAGCCCACAGGCCCAGCAGCACCATATCCATCAGTCCTTCTTCGACCCACGGGCTTTCCATGGTGGGTCATCAACTGCTTCTTCTTACCCTCCACCTCAACCACAACCTCCTTCCATGCTCTCCCTTGACCCTCTTCCTGGTCATGGACATGGACATGGCCCTGGATTCCTCCTTGTACCAAAATCCGAGGATGTTAACAGACCCATAGACTTCGTGGGCTCTAGACTTGGACTCAACCTTGGTGGCCGCACATACTTCTCTTCCGAAGACGACTTCGTGAGCCGCCTTTACCGTCGGTCTAGACCACCTGAACCGGGTTCGACAGGTTCTTCAAACTCGCCTCGGTGTCAGGCCGAAGGTTGCAATGCTGATCTATCTCAGGCGAAGCACTACCACCGCCGCCACAAAGTTTGTGAGTTTCACTCCAAGGCAGCCACCGTCGTTGCAGCTGGGTTGACTCAGCGGTTCTGCCAGCAATGCAGCAGGTTCCATCTTCTATCTGAGTTTGATAATGGAAAACGTAGCTGCAGGAAGAGATTGGCTGATCATAATCGTCGCAGGAGAAAAACTCAGCACCCAAATACTCAAGATATTCACAAATCTCACAATACTTTGGATAATTCTTCCACAAGATCCCCGCCAGAGTCTGGAACTCAATCTACATCGTCGGTGACAGTGGCGGTTTCTCCACCGGATTATTTTCGACAAAGGTCGTACCAAAGCCCAAGCCCTTCAACAACTTCAAGCTCAATGTTTTTCTCCACCGGGTAG
Protein sequence

>Msa1227970

MLDYEWGNPTNIMLTGNEDNNSAAAAASDQAHRQIFDHYASQAMLSDNYLNGPGAGPTIDINSGDFTHHNHHHHHNQFSPQAQQHHIHQSFFDPRAFHGGSSTASSYPPPQPQPPSMLSLDPLPGHGHGHGPGFLLVPKSEDVNRPIDFVGSRLGLNLGGRTYFSSEDDFVSRLYRRSRPPEPGSTGSSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVVAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQHPNTQDIHKSHNTLDNSSTRSPPESGTQSTSSVTVAVSPPDYFRQRSYQSPSPSTTSSSMFFSTG*