Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399560 | XP_013458369.1 | 97.384 | 497 | 13 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399560 | sp|Q42456|ASPR1_ORYSJ | 51.639 | 488 | 224 | 2 | 22 | 497 | 22 | 509 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399560 | A0A072V2S8 | 97.384 | 497 | 13 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1005 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1399560 | -0.821738 | 3.441999e-53 | -8.615850e-47 |
| Msa0017510 | Msa1399560 | 0.810717 | 1.003505e-50 | -8.615850e-47 |
| Msa0029540 | Msa1399560 | -0.801598 | 8.350334e-49 | -8.615850e-47 |
| Msa0036430 | Msa1399560 | 0.812915 | 3.333302e-51 | -8.615850e-47 |
| Msa0036960 | Msa1399560 | 0.816789 | 4.613259e-52 | -8.615850e-47 |
| Msa0044100 | Msa1399560 | 0.838541 | 2.704445e-57 | -8.615850e-47 |
| Msa0048000 | Msa1399560 | 0.813880 | 2.046381e-51 | -8.615850e-47 |
| Msa0069260 | Msa1399560 | 0.800260 | 1.566879e-48 | -8.615850e-47 |
| Msa0069310 | Msa1399560 | 0.813665 | 2.281594e-51 | -8.615850e-47 |
| Msa0072370 | Msa1399560 | 0.803541 | 3.318232e-49 | -8.615850e-47 |
| Msa0095540 | Msa1399560 | 0.834420 | 3.028242e-56 | -8.615850e-47 |
| Msa0101810 | Msa1399560 | -0.803889 | 2.810038e-49 | -8.615850e-47 |
| Msa0105420 | Msa1399560 | 0.820237 | 7.628064e-53 | -8.615850e-47 |
| Msa0112750 | Msa1399560 | 0.801481 | 8.822888e-49 | -8.615850e-47 |
| Msa1367080 | Msa1399560 | 0.808171 | 3.530742e-50 | -8.615850e-47 |
| Msa1369700 | Msa1399560 | 0.867542 | 1.267829e-65 | -8.615850e-47 |
| Msa1370090 | Msa1399560 | 0.804044 | 2.609275e-49 | -8.615850e-47 |
| Msa1390310 | Msa1399560 | 0.814551 | 1.454386e-51 | -8.615850e-47 |
| Msa1395870 | Msa1399560 | 0.945246 | 4.373756e-104 | -8.615850e-47 |
| Msa1397250 | Msa1399560 | 0.836290 | 1.020486e-56 | -8.615850e-47 |
| Msa1397340 | Msa1399560 | 0.804699 | 1.905687e-49 | -8.615850e-47 |
| Msa1399560 | Msa1401150 | 0.818597 | 1.803874e-52 | -8.615850e-47 |
| Msa1399560 | Msa1404540 | 0.809330 | 1.995436e-50 | -8.615850e-47 |
| Msa1399560 | Msa1429360 | -0.824363 | 8.406538e-54 | -8.615850e-47 |
| Msa1399560 | Msa1431060 | 0.801765 | 7.714225e-49 | -8.615850e-47 |
| Msa1399560 | Msa1437190 | 0.857914 | 1.179172e-62 | -8.615850e-47 |
| Msa1399560 | Msa1439960 | 0.815455 | 9.162428e-52 | -8.615850e-47 |
| Msa1399560 | Msa1440340 | 0.813714 | 2.225638e-51 | -8.615850e-47 |
| Msa1399560 | Msa1443840 | 0.879557 | 1.130821e-69 | -8.615850e-47 |
| Msa1399560 | Msa1449730 | 0.839544 | 1.487600e-57 | -8.615850e-47 |
| Msa1399560 | Msa1452060 | 0.862017 | 6.822602e-64 | -8.615850e-47 |
| Msa1399560 | Msa1460380 | 0.871100 | 8.836283e-67 | -8.615850e-47 |
| Msa1399560 | Msa1460890 | 0.824230 | 9.032295e-54 | -8.615850e-47 |
| Msa0611380 | Msa1399560 | 0.879723 | 9.875677e-70 | -8.615850e-47 |
| Msa0618180 | Msa1399560 | 0.856551 | 2.980778e-62 | -8.615850e-47 |
| Msa0618220 | Msa1399560 | 0.848561 | 5.667342e-60 | -8.615850e-47 |
| Msa0618290 | Msa1399560 | 0.813734 | 2.203665e-51 | -8.615850e-47 |
| Msa0619070 | Msa1399560 | 0.803235 | 3.840484e-49 | -8.615850e-47 |
| Msa0619990 | Msa1399560 | 0.818875 | 1.560159e-52 | -8.615850e-47 |
| Msa0621890 | Msa1399560 | 0.802843 | 4.629294e-49 | -8.615850e-47 |
| Msa0628640 | Msa1399560 | 0.867557 | 1.253613e-65 | -8.615850e-47 |
| Msa0631120 | Msa1399560 | 0.888933 | 3.802384e-73 | -8.615850e-47 |
| Msa0633840 | Msa1399560 | 0.813186 | 2.906787e-51 | -8.615850e-47 |
| Msa0650070 | Msa1399560 | 0.842858 | 2.000655e-58 | -8.615850e-47 |
| Msa0666030 | Msa1399560 | 0.862344 | 5.418166e-64 | -8.615850e-47 |
| Msa0669340 | Msa1399560 | 0.887128 | 1.873169e-72 | -8.615850e-47 |
| Msa0682550 | Msa1399560 | 0.800049 | 1.729525e-48 | -8.615850e-47 |
| Msa0684500 | Msa1399560 | 0.840238 | 9.806743e-58 | -8.615850e-47 |
| Msa0692060 | Msa1399560 | 0.824807 | 6.608963e-54 | -8.615850e-47 |
| Msa0701970 | Msa1399560 | 0.854199 | 1.442572e-61 | -8.615850e-47 |
| Msa0706420 | Msa1399560 | 0.809659 | 1.696153e-50 | -8.615850e-47 |
| Msa0708520 | Msa1399560 | 0.814522 | 1.475940e-51 | -8.615850e-47 |
| Msa0709500 | Msa1399560 | 0.820034 | 8.489140e-53 | -8.615850e-47 |
| Msa0716450 | Msa1399560 | 0.888602 | 5.104335e-73 | -8.615850e-47 |
| Msa0717260 | Msa1399560 | 0.896773 | 2.673128e-76 | -8.615850e-47 |
| Msa0734230 | Msa1399560 | 0.831581 | 1.539447e-55 | -8.615850e-47 |
| Msa0741900 | Msa1399560 | 0.823739 | 1.177837e-53 | -8.615850e-47 |
| Msa0754720 | Msa1399560 | -0.828318 | 9.611863e-55 | -8.615850e-47 |
| Msa0756630 | Msa1399560 | -0.824230 | 9.035412e-54 | -8.615850e-47 |
| Msa0758320 | Msa1399560 | 0.895947 | 5.900967e-76 | -8.615850e-47 |
| Msa0775440 | Msa1399560 | 0.871131 | 8.630966e-67 | -8.615850e-47 |
| Msa0787260 | Msa1399560 | 0.801277 | 9.714619e-49 | -8.615850e-47 |
| Msa0790850 | Msa1399560 | 0.817678 | 2.911401e-52 | -8.615850e-47 |
| Msa0799030 | Msa1399560 | 0.872563 | 2.889906e-67 | -8.615850e-47 |
| Msa0799700 | Msa1399560 | 0.849497 | 3.112906e-60 | -8.615850e-47 |
| Msa0804680 | Msa1399560 | 0.807463 | 4.992406e-50 | -8.615850e-47 |
| Msa0812820 | Msa1399560 | 0.858213 | 9.610506e-63 | -8.615850e-47 |
| Msa0819680 | Msa1399560 | 0.816351 | 5.783515e-52 | -8.615850e-47 |
| Msa0822990 | Msa1399560 | 0.828049 | 1.115926e-54 | -8.615850e-47 |
| Msa0829620 | Msa1399560 | 0.813224 | 2.852841e-51 | -8.615850e-47 |
| Msa0837440 | Msa1399560 | 0.868424 | 6.597620e-66 | -8.615850e-47 |
| Msa0837980 | Msa1399560 | 0.899077 | 2.830316e-77 | -8.615850e-47 |
| Msa0130570 | Msa1399560 | 0.811220 | 7.806998e-51 | -8.615850e-47 |
| Msa0141100 | Msa1399560 | 0.899798 | 1.386554e-77 | -8.615850e-47 |
| Msa0148340 | Msa1399560 | 0.816821 | 4.538486e-52 | -8.615850e-47 |
| Msa0153420 | Msa1399560 | 0.805206 | 1.493263e-49 | -8.615850e-47 |
| Msa0156650 | Msa1399560 | -0.813629 | 2.323719e-51 | -8.615850e-47 |
| Msa0157290 | Msa1399560 | 0.810205 | 1.294144e-50 | -8.615850e-47 |
| Msa0172350 | Msa1399560 | 0.829184 | 5.933832e-55 | -8.615850e-47 |
| Msa0183750 | Msa1399560 | 0.852630 | 4.070295e-61 | -8.615850e-47 |
| Msa0185380 | Msa1399560 | 0.805110 | 1.563969e-49 | -8.615850e-47 |
| Msa0191040 | Msa1399560 | 0.838169 | 3.373617e-57 | -8.615850e-47 |
| Msa0191250 | Msa1399560 | 0.811079 | 8.374397e-51 | -8.615850e-47 |
| Msa0220300 | Msa1399560 | 0.849472 | 3.164790e-60 | -8.615850e-47 |
| Msa0225600 | Msa1399560 | 0.824696 | 7.017197e-54 | -8.615850e-47 |
| Msa0233340 | Msa1399560 | 0.838310 | 3.103619e-57 | -8.615850e-47 |
| Msa0236440 | Msa1399560 | 0.825897 | 3.648171e-54 | -8.615850e-47 |
| Msa1227950 | Msa1399560 | 0.851596 | 8.009117e-61 | -8.615850e-47 |
| Msa1227970 | Msa1399560 | 0.845678 | 3.496231e-59 | -8.615850e-47 |
| Msa1228210 | Msa1399560 | 0.811246 | 7.707946e-51 | -8.615850e-47 |
| Msa1254700 | Msa1399560 | 0.814888 | 1.224592e-51 | -8.615850e-47 |
| Msa1255040 | Msa1399560 | -0.800281 | 1.551501e-48 | -8.615850e-47 |
| Msa1255280 | Msa1399560 | 0.883875 | 3.098867e-71 | -8.615850e-47 |
| Msa1258050 | Msa1399560 | 0.862420 | 5.133659e-64 | -8.615850e-47 |
| Msa1264020 | Msa1399560 | 0.821425 | 4.065327e-53 | -8.615850e-47 |
| Msa1266960 | Msa1399560 | 0.987817 | 1.203386e-171 | -8.615850e-47 |
| Msa1269580 | Msa1399560 | -0.830406 | 2.989661e-55 | -8.615850e-47 |
| Msa1291870 | Msa1399560 | 0.851822 | 6.907160e-61 | -8.615850e-47 |
| Msa1297180 | Msa1399560 | 0.800800 | 1.216029e-48 | -8.615850e-47 |
| Msa1308130 | Msa1399560 | 0.837282 | 5.697838e-57 | -8.615850e-47 |
| Msa1308380 | Msa1399560 | 0.804018 | 2.641760e-49 | -8.615850e-47 |
| Msa1320740 | Msa1399560 | 0.807826 | 4.181181e-50 | -8.615850e-47 |
| Msa1321000 | Msa1399560 | 0.803630 | 3.181142e-49 | -8.615850e-47 |
| Msa1329920 | Msa1399560 | 0.816745 | 4.719153e-52 | -8.615850e-47 |
| Msa1339940 | Msa1399560 | 0.861735 | 8.322906e-64 | -8.615850e-47 |
| Msa0369440 | Msa1399560 | 0.801130 | 1.041162e-48 | -8.615850e-47 |
| Msa0374850 | Msa1399560 | 0.898894 | 3.391420e-77 | -8.615850e-47 |
| Msa0375090 | Msa1399560 | 0.895624 | 8.030626e-76 | -8.615850e-47 |
| Msa0385670 | Msa1399560 | 0.863552 | 2.294689e-64 | -8.615850e-47 |
| Msa0414950 | Msa1399560 | -0.808847 | 2.532661e-50 | -8.615850e-47 |
| Msa0419820 | Msa1399560 | 0.821649 | 3.609635e-53 | -8.615850e-47 |
| Msa0423360 | Msa1399560 | -0.831500 | 1.611595e-55 | -8.615850e-47 |
| Msa0435670 | Msa1399560 | 0.852455 | 4.564345e-61 | -8.615850e-47 |
| Msa0436280 | Msa1399560 | -0.822964 | 1.786706e-53 | -8.615850e-47 |
| Msa0459770 | Msa1399560 | -0.801124 | 1.043786e-48 | -8.615850e-47 |
| Msa0470340 | Msa1399560 | 0.887112 | 1.899500e-72 | -8.615850e-47 |
| Msa0470860 | Msa1399560 | 0.903061 | 5.114977e-79 | -8.615850e-47 |
| Msa0479680 | Msa1399560 | 0.834106 | 3.631480e-56 | -8.615850e-47 |
| Msa0479700 | Msa1399560 | 0.827127 | 1.857637e-54 | -8.615850e-47 |
| Msa0480950 | Msa1399560 | 0.886503 | 3.233287e-72 | -8.615850e-47 |
| Msa0481110 | Msa1399560 | 0.855667 | 5.410055e-62 | -8.615850e-47 |
| Msa0981010 | Msa1399560 | 0.830742 | 2.473858e-55 | -8.615850e-47 |
| Msa1002620 | Msa1399560 | 0.867960 | 9.310472e-66 | -8.615850e-47 |
| Msa1007610 | Msa1399560 | -0.808249 | 3.397500e-50 | -8.615850e-47 |
| Msa1010110 | Msa1399560 | 0.814336 | 1.622782e-51 | -8.615850e-47 |
| Msa1019020 | Msa1399560 | 0.819033 | 1.435870e-52 | -8.615850e-47 |
| Msa1033560 | Msa1399560 | 0.844816 | 5.979737e-59 | -8.615850e-47 |
| Msa1037700 | Msa1399560 | -0.807182 | 5.727695e-50 | -8.615850e-47 |
| Msa1069100 | Msa1399560 | 0.812895 | 3.367763e-51 | -8.615850e-47 |
| Msa1082500 | Msa1399560 | 0.802136 | 6.473329e-49 | -8.615850e-47 |
| Msa1085300 | Msa1399560 | 0.806998 | 6.263295e-50 | -8.615850e-47 |
| Msa1098560 | Msa1399560 | 0.807629 | 4.604521e-50 | -8.615850e-47 |
| Msa1104000 | Msa1399560 | 0.823871 | 1.096985e-53 | -8.615850e-47 |
| Msa0251240 | Msa1399560 | 0.834219 | 3.400622e-56 | -8.615850e-47 |
| Msa0260810 | Msa1399560 | 0.809748 | 1.623041e-50 | -8.615850e-47 |
| Msa0266450 | Msa1399560 | 0.822062 | 2.895940e-53 | -8.615850e-47 |
| Msa0267760 | Msa1399560 | 0.825298 | 5.059473e-54 | -8.615850e-47 |
| Msa0271040 | Msa1399560 | 0.804048 | 2.603834e-49 | -8.615850e-47 |
| Msa0309350 | Msa1399560 | 0.810061 | 1.389728e-50 | -8.615850e-47 |
| Msa0311690 | Msa1399560 | 0.826842 | 2.173035e-54 | -8.615850e-47 |
| Msa0311860 | Msa1399560 | 0.800956 | 1.129875e-48 | -8.615850e-47 |
| Msa0315250 | Msa1399560 | 0.827187 | 1.796393e-54 | -8.615850e-47 |
| Msa0317280 | Msa1399560 | 0.800265 | 1.563228e-48 | -8.615850e-47 |
| Msa0326540 | Msa1399560 | 0.803554 | 3.297652e-49 | -8.615850e-47 |
| Msa0334500 | Msa1399560 | 0.814173 | 1.763232e-51 | -8.615850e-47 |
| Msa1113850 | Msa1399560 | 0.842661 | 2.256217e-58 | -8.615850e-47 |
| Msa1125760 | Msa1399560 | 0.824759 | 6.780683e-54 | -8.615850e-47 |
| Msa1130270 | Msa1399560 | -0.823338 | 1.461641e-53 | -8.615850e-47 |
| Msa1145250 | Msa1399560 | -0.806341 | 8.623885e-50 | -8.615850e-47 |
| Msa1160400 | Msa1399560 | 0.839591 | 1.445591e-57 | -8.615850e-47 |
| Msa1171360 | Msa1399560 | 0.817417 | 3.333400e-52 | -8.615850e-47 |
| Msa1172670 | Msa1399560 | 0.808576 | 2.894084e-50 | -8.615850e-47 |
| Msa1179460 | Msa1399560 | 0.818415 | 1.983703e-52 | -8.615850e-47 |
| Msa1190120 | Msa1399560 | 0.886014 | 4.940707e-72 | -8.615850e-47 |
| Msa1197590 | Msa1399560 | 0.838908 | 2.174741e-57 | -8.615850e-47 |
| Msa1201890 | Msa1399560 | 0.810628 | 1.048866e-50 | -8.615850e-47 |
| Msa1203000 | Msa1399560 | 0.892250 | 1.888114e-74 | -8.615850e-47 |
| Msa1205960 | Msa1399560 | 0.809012 | 2.334600e-50 | -8.615850e-47 |
| Msa1211550 | Msa1399560 | 0.854066 | 1.576286e-61 | -8.615850e-47 |
| Msa1217860 | Msa1399560 | 0.818735 | 1.678732e-52 | -8.615850e-47 |
| Msa1217940 | Msa1399560 | 0.864663 | 1.033704e-64 | -8.615850e-47 |
| Msa1218480 | Msa1399560 | 0.823997 | 1.024766e-53 | -8.615850e-47 |
| Msa1219260 | Msa1399560 | 0.980252 | 8.579098e-150 | -8.615850e-47 |
| Msa1222970 | Msa1399560 | 0.808045 | 3.755428e-50 | -8.615850e-47 |
| Msa0484780 | Msa1399560 | 0.824963 | 6.070021e-54 | -8.615850e-47 |
| Msa0503580 | Msa1399560 | 0.802795 | 4.735022e-49 | -8.615850e-47 |
| Msa0526710 | Msa1399560 | 0.822447 | 2.357292e-53 | -8.615850e-47 |
| Msa0531430 | Msa1399560 | 0.882092 | 1.391472e-70 | -8.615850e-47 |
| Msa0534570 | Msa1399560 | 0.829114 | 6.169024e-55 | -8.615850e-47 |
| Msa0534590 | Msa1399560 | 0.890230 | 1.189280e-73 | -8.615850e-47 |
| Msa0548620 | Msa1399560 | 0.803342 | 3.648496e-49 | -8.615850e-47 |
| Msa0565600 | Msa1399560 | 0.851748 | 7.251927e-61 | -8.615850e-47 |
| Msa0581760 | Msa1399560 | 0.808719 | 2.697117e-50 | -8.615850e-47 |
| Msa0590800 | Msa1399560 | 0.882109 | 1.372145e-70 | -8.615850e-47 |
| Msa0853320 | Msa1399560 | 0.870824 | 1.089259e-66 | -8.615850e-47 |
| Msa0862100 | Msa1399560 | 0.820390 | 7.036193e-53 | -8.615850e-47 |
| Msa0867890 | Msa1399560 | 0.818310 | 2.095881e-52 | -8.615850e-47 |
| Msa0870530 | Msa1399560 | 0.803192 | 3.920428e-49 | -8.615850e-47 |
| Msa0880140 | Msa1399560 | 0.813126 | 2.996891e-51 | -8.615850e-47 |
| Msa0880710 | Msa1399560 | 0.810662 | 1.030925e-50 | -8.615850e-47 |
| Msa0894890 | Msa1399560 | 0.813600 | 2.357754e-51 | -8.615850e-47 |
| Msa0908170 | Msa1399560 | 0.801803 | 7.578566e-49 | -8.615850e-47 |
| Msa0922410 | Msa1399560 | 0.807537 | 4.815656e-50 | -8.615850e-47 |
| Msa0966420 | Msa1399560 | 0.803325 | 3.678501e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399560 | MtrunA17_Chr4g0069631 | 97.384 | 497 | 13 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1005 |
| Msa1399560 | MtrunA17_Chr2g0302421 | 67.331 | 502 | 154 | 2 | 6 | 497 | 1 | 502 | 0.0 | 729 |
| Msa1399560 | MtrunA17_Chr7g0271351 | 55.777 | 502 | 211 | 5 | 5 | 497 | 5 | 504 | 0.0 | 601 |
| Msa1399560 | MtrunA17_Chr1g0193211 | 53.529 | 510 | 222 | 4 | 1 | 497 | 1 | 508 | 0.0 | 585 |
| Msa1399560 | MtrunA17_Chr4g0075181 | 52.015 | 521 | 224 | 4 | 1 | 497 | 1 | 519 | 0.0 | 560 |
| Msa1399560 | MtrunA17_Chr2g0288851 | 51.186 | 506 | 236 | 2 | 3 | 497 | 5 | 510 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399560 | AT1G11910.1 | 52.784 | 485 | 222 | 1 | 20 | 497 | 22 | 506 | 0.0 | 558 |
| Msa1399560 | AT1G11910.2 | 52.784 | 485 | 222 | 1 | 20 | 497 | 33 | 517 | 0.0 | 557 |
| Msa1399560 | AT1G62290.1 | 51.935 | 491 | 222 | 3 | 20 | 496 | 22 | 512 | 0.0 | 551 |
| Msa1399560 | AT1G62290.2 | 51.935 | 491 | 222 | 3 | 20 | 496 | 22 | 512 | 0.0 | 551 |
| Msa1399560 | AT4G04460.1 | 48.880 | 491 | 237 | 3 | 18 | 497 | 21 | 508 | 1.15e-180 | 516 |
| Msa1399560 | AT4G04460.2 | 49.091 | 495 | 226 | 5 | 18 | 497 | 21 | 504 | 1.12e-179 | 514 |
| Msa1399560 | AT1G62290.5 | 50.753 | 465 | 215 | 3 | 20 | 470 | 22 | 486 | 2.99e-177 | 507 |
| Msa1399560 | AT1G62290.6 | 50.575 | 435 | 201 | 3 | 20 | 440 | 22 | 456 | 3.88e-162 | 468 |
| Msa1399560 | AT1G62290.4 | 50.575 | 435 | 201 | 3 | 20 | 440 | 22 | 456 | 3.88e-162 | 468 |
| Msa1399560 | AT1G62290.3 | 51.515 | 396 | 178 | 3 | 20 | 401 | 22 | 417 | 2.24e-146 | 426 |
| Msa1399560 | AT4G22050.1 | 40.925 | 281 | 141 | 8 | 25 | 301 | 15 | 274 | 5.62e-50 | 175 |
| Msa1399560 | AT1G69100.1 | 34.767 | 279 | 153 | 9 | 31 | 300 | 22 | 280 | 1.03e-41 | 153 |
| Msa1399560 | AT1G69100.2 | 34.767 | 279 | 153 | 9 | 31 | 300 | 30 | 288 | 1.11e-41 | 153 |
Find 154 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATATGGGGTTAAAGTATT+TGG | 0.173999 | tig0022379:-9874 | Msa1399560:exon |
| TATCTCGATGCACAATATTT+TGG | 0.184859 | tig0022379:-9669 | Msa1399560:CDS |
| CAATGTTTGAATCTGGGTTT+TGG | 0.227356 | tig0022379:+8638 | None:intergenic |
| GGTTCTTGGAGATATATTTC+TGG | 0.239687 | tig0022379:-7030 | Msa1399560:CDS |
| TTCAAAGTGGTGTTTGATAC+TGG | 0.247379 | tig0022379:-9615 | Msa1399560:CDS |
| GACTAGATGACTTGAAAATA+TGG | 0.249296 | tig0022379:-9889 | Msa1399560:exon |
| AGGTAAAATTGTACCTGTTC+TGG | 0.258936 | tig0022379:+7341 | None:intergenic |
| CTGTGATCTGCTTGTGGGCT+TGG | 0.264891 | tig0022379:-9848 | Msa1399560:CDS |
| ATACTGGGAGCTCCAATCTT+TGG | 0.285088 | tig0022379:-9599 | Msa1399560:CDS |
| GGAATGTGTCCACGGCTAAA+AGG | 0.285782 | tig0022379:+9271 | None:intergenic |
| TCACCTCCAATGTTTGAATC+TGG | 0.287305 | tig0022379:+8631 | None:intergenic |
| ATTATAGAGTAGTGATAAAA+TGG | 0.288861 | tig0022379:+6580 | None:intergenic |
| GGTCAGCAATAGCAATAAAT+AGG | 0.296878 | tig0022379:-6874 | Msa1399560:three_prime_UTR |
| CAGGGTCGTCTCTAGGTAAT+TGG | 0.299518 | tig0022379:-6557 | Msa1399560:three_prime_UTR |
| TTTAGCCGTGGACACATTCC+TGG | 0.304270 | tig0022379:-9268 | Msa1399560:CDS |
| ATACCTATGGTGATTCGATA+TGG | 0.307900 | tig0022379:-8010 | Msa1399560:CDS |
| GATTACAAAGGAAGGATCTT+TGG | 0.314421 | tig0022379:-8975 | Msa1399560:CDS |
| TACTGGGAGCTCCAATCTTT+GGG | 0.314929 | tig0022379:-9598 | Msa1399560:CDS |
| AATATAATTTGTGGCATAGT+TGG | 0.317898 | tig0022379:+7395 | None:intergenic |
| ATGTCGACGCATATAATTTC+AGG | 0.330084 | tig0022379:+7872 | None:intergenic |
| GTGGGCTTGGTTCCAATCCT+TGG | 0.334099 | tig0022379:-9835 | Msa1399560:CDS |
| CTCTAACACTAATCTTTATC+AGG | 0.334182 | tig0022379:-10699 | Msa1399560:intron |
| TTTATCACTACTCTATAATC+AGG | 0.341713 | tig0022379:-6576 | Msa1399560:three_prime_UTR |
| GTCAAGATAATTTAAAAGTT+GGG | 0.344229 | tig0022379:-9237 | Msa1399560:CDS |
| ACAGACCCGGGTTCGATTCC+CGG | 0.357479 | tig0022379:+6817 | None:intergenic |
| AGTCAAGATAATTTAAAAGT+TGG | 0.358266 | tig0022379:-9238 | Msa1399560:CDS |
| ATATGGGAATTCATAACTAA+TGG | 0.363388 | tig0022379:-7993 | Msa1399560:CDS |
| CACCTCCAATGTTTGAATCT+GGG | 0.367366 | tig0022379:+8632 | None:intergenic |
| TATGGGAATTCATAACTAAT+GGG | 0.370287 | tig0022379:-7992 | Msa1399560:CDS |
| CAATAGCCCTGTTGAGAAAC+TGG | 0.374977 | tig0022379:+8553 | None:intergenic |
| TATGCGACATGATTGTGTTT+TGG | 0.375384 | tig0022379:-7638 | Msa1399560:CDS |
| CCACAAATTATATTCAAGAT+TGG | 0.377100 | tig0022379:-7386 | Msa1399560:CDS |
| TTATGTTCCAGTTTCTCAAC+AGG | 0.378641 | tig0022379:-8560 | Msa1399560:CDS |
| GTTCTTGGAGATATATTTCT+GGG | 0.385418 | tig0022379:-7029 | Msa1399560:CDS |
| CTACTTGAAAACAATTCAAC+AGG | 0.389087 | tig0022379:-8416 | Msa1399560:intron |
| GGAAGATGGGACCCAAAGAT+TGG | 0.393134 | tig0022379:+9587 | None:intergenic |
| CTTGTCCAACTGAAATATCT+TGG | 0.399718 | tig0022379:+8909 | None:intergenic |
| CCAATCTTGAATATAATTTG+TGG | 0.401246 | tig0022379:+7386 | None:intergenic |
| GATAATTTGCATTTGGAAGA+TGG | 0.403424 | tig0022379:+9573 | None:intergenic |
| TCAGGAACATCTTTAATTGC+TGG | 0.405484 | tig0022379:-8193 | Msa1399560:CDS |
| TTCTCTGCTTAAGCTGAACT+TGG | 0.407447 | tig0022379:+7613 | None:intergenic |
| ACTTACAGATAATTTGCATT+TGG | 0.409048 | tig0022379:+9566 | None:intergenic |
| ACCCGGGTCTGTACCGTGGC+AGG | 0.409474 | tig0022379:-6806 | Msa1399560:three_prime_UTR |
| TAAGTAAATTTGTTAGCATT+GGG | 0.410588 | tig0022379:-6666 | Msa1399560:three_prime_UTR |
| TGGTTGCAATGCAGGGTTCT+TGG | 0.411878 | tig0022379:-7044 | Msa1399560:intron |
| GAGAAACTGGAACATAAGTA+TGG | 0.414422 | tig0022379:+8566 | None:intergenic |
| AACACCACTTTGAAGATTTG+TGG | 0.416237 | tig0022379:+9624 | None:intergenic |
| AAATGATTGTCCCACTGGAT+TGG | 0.419222 | tig0022379:+7436 | None:intergenic |
| CAGTTTCTCAACAGGGCTAT+TGG | 0.422671 | tig0022379:-8552 | Msa1399560:CDS |
| GGTAACTGTGATCTGCTTGT+GGG | 0.423949 | tig0022379:-9853 | Msa1399560:CDS |
| ACTAGATGACTTGAAAATAT+GGG | 0.425541 | tig0022379:-9888 | Msa1399560:exon |
| TTAAGTAAATTTGTTAGCAT+TGG | 0.427900 | tig0022379:-6667 | Msa1399560:three_prime_UTR |
| AATGATTGTCCCACTGGATT+GGG | 0.429612 | tig0022379:+7437 | None:intergenic |
| TGTGTAAGTGCTAGATAGCT+TGG | 0.430995 | tig0022379:+9430 | None:intergenic |
| GCTTCTGCAACTTCTAATGA+AGG | 0.432551 | tig0022379:-9813 | Msa1399560:CDS |
| GCTACATTCATTCCAAGTAT+AGG | 0.435596 | tig0022379:-9454 | Msa1399560:CDS |
| CTCCTCCACAGGGTCCTCTC+TGG | 0.437105 | tig0022379:-7148 | Msa1399560:intron |
| TATAGATGTGCCTCCTCCAC+AGG | 0.438696 | tig0022379:-7159 | Msa1399560:CDS |
| GAATGTGTCCACGGCTAAAA+GGG | 0.452384 | tig0022379:+9272 | None:intergenic |
| TTTATAAATGATTGTCCCAC+TGG | 0.452717 | tig0022379:+7431 | None:intergenic |
| ATTTCCTCTATCTCCAGAAC+AGG | 0.455816 | tig0022379:-7354 | Msa1399560:intron |
| CACCAGCCGGGAATCGAACC+CGG | 0.457440 | tig0022379:-6823 | Msa1399560:three_prime_UTR |
| AGATAGCTTGGACCTATACT+TGG | 0.461811 | tig0022379:+9442 | None:intergenic |
| TGATAAAATGGATGTCATAA+AGG | 0.463357 | tig0022379:+6592 | None:intergenic |
| ATAATTTGCATTTGGAAGAT+GGG | 0.473403 | tig0022379:+9574 | None:intergenic |
| TTTCATCTTTAGATTGATGT+TGG | 0.476903 | tig0022379:-8446 | Msa1399560:intron |
| GGAGGTGAGATTGTGTTTGG+TGG | 0.478829 | tig0022379:-8616 | Msa1399560:CDS |
| TGTACCTGTTCTGGAGATAG+AGG | 0.479246 | tig0022379:+7350 | None:intergenic |
| CAATAAATAGGCTGTCTCAT+GGG | 0.481810 | tig0022379:-6862 | Msa1399560:three_prime_UTR |
| ATTGGACTCTGCTCACGTAA+TGG | 0.483111 | tig0022379:-7851 | Msa1399560:CDS |
| TGGTAACTGTGATCTGCTTG+TGG | 0.483433 | tig0022379:-9854 | Msa1399560:CDS |
| ATTGGAGGTGAGATTGTGTT+TGG | 0.484906 | tig0022379:-8619 | Msa1399560:CDS |
| TACCTATGGTGATTCGATAT+GGG | 0.484972 | tig0022379:-8009 | Msa1399560:CDS |
| TTGTGTTTGGTGGTATTGAC+TGG | 0.485792 | tig0022379:-8606 | Msa1399560:CDS |
| TTCTCAACAGGGCTATTGGC+AGG | 0.489968 | tig0022379:-8548 | Msa1399560:intron |
| CTTCTAATGAAGGGTTAATG+AGG | 0.496154 | tig0022379:-9803 | Msa1399560:CDS |
| TGAAGCTGCATAGACTTAGT+AGG | 0.497672 | tig0022379:-6958 | Msa1399560:exon |
| AGTGGTAGACGATGAAAGTT+GGG | 0.502040 | tig0022379:-7697 | Msa1399560:CDS |
| GAAATTATATGCGTCGACAT+TGG | 0.502631 | tig0022379:-7869 | Msa1399560:CDS |
| GCTGAAACTGTGATTAACAT+TGG | 0.506700 | tig0022379:-9911 | Msa1399560:five_prime_UTR |
| GAATATCATCATCAAAGATC+AGG | 0.511716 | tig0022379:-9215 | Msa1399560:intron |
| TGTTCTAGTGTCTGCTATGG+AGG | 0.512921 | tig0022379:-7191 | Msa1399560:CDS |
| CTATAATCAGGGTCGTCTCT+AGG | 0.514369 | tig0022379:-6564 | Msa1399560:three_prime_UTR |
| CAAAACCCAGATTCAAACAT+TGG | 0.517182 | tig0022379:-8637 | Msa1399560:CDS |
| AACCATGCCATTGGAGCTGA+AGG | 0.517861 | tig0022379:-8065 | Msa1399560:CDS |
| TCTCTAGGTAATTGGAGGCT+CGG | 0.522354 | tig0022379:-6549 | Msa1399560:three_prime_UTR |
| CAGTGGTAGACGATGAAAGT+TGG | 0.522995 | tig0022379:-7698 | Msa1399560:CDS |
| ATATCGAATCACCATAGGTA+TGG | 0.523540 | tig0022379:+8012 | None:intergenic |
| TCAAAGTGGTGTTTGATACT+GGG | 0.526507 | tig0022379:-9614 | Msa1399560:CDS |
| ACCCGGGTTCGATTCCCGGC+TGG | 0.528271 | tig0022379:+6821 | None:intergenic |
| TATGTACTAAGAGTTGAAGA+AGG | 0.533465 | tig0022379:-7215 | Msa1399560:CDS |
| GCAATAAATAGGCTGTCTCA+TGG | 0.534649 | tig0022379:-6863 | Msa1399560:three_prime_UTR |
| GGATTCCAAGATATTTCAGT+TGG | 0.535246 | tig0022379:-8914 | Msa1399560:CDS |
| CAGAGAGGACCCTGTGGAGG+AGG | 0.536022 | tig0022379:+7149 | None:intergenic |
| ATTAGAAGTTGCAGAAGCCA+AGG | 0.540207 | tig0022379:+9818 | None:intergenic |
| AACATATCCTTCAGCTCCAA+TGG | 0.541608 | tig0022379:+8058 | None:intergenic |
| GGTCGTCTCTAGGTAATTGG+AGG | 0.541979 | tig0022379:-6554 | Msa1399560:three_prime_UTR |
| ACCAGCCGGGAATCGAACCC+GGG | 0.544602 | tig0022379:-6822 | Msa1399560:three_prime_UTR |
| AAGTTGCAGAAGCCAAGGAT+TGG | 0.545355 | tig0022379:+9823 | None:intergenic |
| ACTCAAATTAACCATGCCAT+TGG | 0.549157 | tig0022379:-8074 | Msa1399560:CDS |
| ACCCTGCCACGGTACAGACC+CGG | 0.550647 | tig0022379:+6804 | None:intergenic |
| TTTACTGAGATTACAAAGGA+AGG | 0.552147 | tig0022379:-8983 | Msa1399560:CDS |
| TTATCTTGACTGAAGAAGCC+AGG | 0.552739 | tig0022379:+9250 | None:intergenic |
| CTTCTGCAACTTCTAATGAA+GGG | 0.557919 | tig0022379:-9812 | Msa1399560:CDS |
| AATAATAAAATATGTTGATG+AGG | 0.560714 | tig0022379:-7577 | Msa1399560:intron |
| CTATTCTACCACTAGACCAC+TGG | 0.563833 | tig0022379:-6780 | Msa1399560:three_prime_UTR |
| GGGTGTTCTAGTGTCTGCTA+TGG | 0.570604 | tig0022379:-7194 | Msa1399560:CDS |
| GATTATGGAAATCTCCGTGT+GGG | 0.571367 | tig0022379:-6987 | Msa1399560:CDS |
| TTATCACTACTCTATAATCA+GGG | 0.572176 | tig0022379:-6575 | Msa1399560:three_prime_UTR |
| CAAAAGCACCAGTGGTCTAG+TGG | 0.572659 | tig0022379:+6772 | None:intergenic |
| TTTGACGGGATACTTGGACT+TGG | 0.575605 | tig0022379:-8935 | Msa1399560:CDS |
| ATCCTTCAGCTCCAATGGCA+TGG | 0.576643 | tig0022379:+8063 | None:intergenic |
| TCTTGGAGATATATTTCTGG+GGG | 0.585135 | tig0022379:-7027 | Msa1399560:CDS |
| AATAAATAGGCTGTCTCATG+GGG | 0.587757 | tig0022379:-6861 | Msa1399560:three_prime_UTR |
| ATAGATGTGCCTCCTCCACA+GGG | 0.591973 | tig0022379:-7158 | Msa1399560:CDS |
| GTCAAATAAAATACACTACA+AGG | 0.594406 | tig0022379:+6741 | None:intergenic |
| CCCGGGTCTGTACCGTGGCA+GGG | 0.597108 | tig0022379:-6805 | Msa1399560:three_prime_UTR |
| CATGTCGCATAAAGTACACA+AGG | 0.602609 | tig0022379:+7650 | None:intergenic |
| GTTGGGATGAGACACAAAGT+AGG | 0.606352 | tig0022379:-7680 | Msa1399560:CDS |
| TACCAGAGAGGACCCTGTGG+AGG | 0.608191 | tig0022379:+7146 | None:intergenic |
| CTAGATGACTTGAAAATATG+GGG | 0.611370 | tig0022379:-9887 | Msa1399560:exon |
| AGGTATAATATGATAGAACA+AGG | 0.611964 | tig0022379:-8697 | Msa1399560:CDS |
| TTGGGATGAGACACAAAGTA+GGG | 0.612456 | tig0022379:-7679 | Msa1399560:CDS |
| TTAACGCTCTAAATTCTGCA+AGG | 0.618906 | tig0022379:-9752 | Msa1399560:CDS |
| TATGATAGAACAAGGGCACA+TGG | 0.618926 | tig0022379:-8689 | Msa1399560:CDS |
| ATAAAGATTAGTGTTAGAGT+AGG | 0.620158 | tig0022379:+10703 | None:intergenic |
| GGAATTTACTGAGATTACAA+AGG | 0.622629 | tig0022379:-8987 | Msa1399560:CDS |
| TGTGCCGCGATTATTGACTC+AGG | 0.623796 | tig0022379:-8211 | Msa1399560:CDS |
| ATGTACTAAGAGTTGAAGAA+GGG | 0.624970 | tig0022379:-7214 | Msa1399560:CDS |
| AACCCAGATTCAAACATTGG+AGG | 0.625934 | tig0022379:-8634 | Msa1399560:CDS |
| TATGTTCCAGTTTCTCAACA+GGG | 0.628853 | tig0022379:-8559 | Msa1399560:CDS |
| ATGGGAATTCATAACTAATG+GGG | 0.628958 | tig0022379:-7991 | Msa1399560:intron |
| ACCACTTTGAAGATTTGTGG+AGG | 0.630372 | tig0022379:+9627 | None:intergenic |
| CAGCTTCAGCAAATCCCACA+CGG | 0.642372 | tig0022379:+6973 | None:intergenic |
| TTCCCATATCGAATCACCAT+AGG | 0.643813 | tig0022379:+8007 | None:intergenic |
| TTCTTGGAGATATATTTCTG+GGG | 0.646685 | tig0022379:-7028 | Msa1399560:CDS |
| ACCTCCACAAATCTTCAAAG+TGG | 0.648170 | tig0022379:-9628 | Msa1399560:CDS |
| AAATCAATAGGGCTATGTCA+AGG | 0.655851 | tig0022379:-8238 | Msa1399560:intron |
| AGAAGCCAGGAATGTGTCCA+CGG | 0.656995 | tig0022379:+9263 | None:intergenic |
| TGAGAAGCTACCCAATCCAG+TGG | 0.660492 | tig0022379:-7447 | Msa1399560:CDS |
| TCGAACCCGGGTCTGTACCG+TGG | 0.661120 | tig0022379:-6810 | Msa1399560:three_prime_UTR |
| AGTTTCAGCAGAAGCAACGA+AGG | 0.662644 | tig0022379:+9925 | None:intergenic |
| TGATTATGGAAATCTCCGTG+TGG | 0.667778 | tig0022379:-6988 | Msa1399560:CDS |
| ACTAAGCACAAAAGCACCAG+TGG | 0.673974 | tig0022379:+6764 | None:intergenic |
| CAGTGATGATATTGAAACAG+TGG | 0.686591 | tig0022379:-7715 | Msa1399560:CDS |
| GGTATAATATGATAGAACAA+GGG | 0.688465 | tig0022379:-8696 | Msa1399560:CDS |
| GAGAAGCTACCCAATCCAGT+GGG | 0.692021 | tig0022379:-7446 | Msa1399560:CDS |
| TGTTCCTGAGTCAATAATCG+CGG | 0.696071 | tig0022379:+8207 | None:intergenic |
| ATGTCGCATAAAGTACACAA+GGG | 0.700023 | tig0022379:+7651 | None:intergenic |
| TCAATAGGGCTATGTCAAGG+TGG | 0.702696 | tig0022379:-8235 | Msa1399560:intron |
| TATATGCTAAGTTACCACAC+TGG | 0.703089 | tig0022379:+8881 | None:intergenic |
| TGTCGCATAAAGTACACAAG+GGG | 0.704481 | tig0022379:+7652 | None:intergenic |
| GGTAGAATAGTACCCTGCCA+CGG | 0.710817 | tig0022379:+6793 | None:intergenic |
| TTGGACAAGTCACACCAGTG+TGG | 0.751446 | tig0022379:-8895 | Msa1399560:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATAAATACAAG+GGG | + | tig0022379:6748-6767 | None:intergenic | 10.0% |
| !! | GAAAAAAAAAATAAATACAA+GGG | + | tig0022379:6749-6768 | None:intergenic | 10.0% |
| !!! | TAATTTTTTTTTTTTTGAGA+CGG | + | tig0022379:6826-6845 | None:intergenic | 10.0% |
| !!! | AAAAAAATTATTTCTACTAT+TGG | - | tig0022379:6836-6855 | Msa1399560:three_prime_UTR | 10.0% |
| !! | GATATAAAAATTAAATCAAT+AGG | - | tig0022379:9010-9029 | Msa1399560:intron | 10.0% |
| !! | GGAAAAAAAAAATAAATACA+AGG | + | tig0022379:6750-6769 | None:intergenic | 15.0% |
| !!! | ATTCAAACTATTTTTTTTGT+TGG | - | tig0022379:7881-7900 | Msa1399560:CDS | 15.0% |
| !! | ATCATAATAGTGATTTAAAA+AGG | + | tig0022379:8095-8114 | None:intergenic | 15.0% |
| !!! | TCATTTTCAAAAATTGTTAA+TGG | - | tig0022379:8201-8220 | Msa1399560:CDS | 15.0% |
| !! | TCATAAAAAACTAGAAATAA+AGG | + | tig0022379:8506-8525 | None:intergenic | 15.0% |
| !! | ATAACTTATCAATAAATGTA+AGG | + | tig0022379:8531-8550 | None:intergenic | 15.0% |
| !! | TAAGTTATCTTAATAAATAC+AGG | - | tig0022379:8543-8562 | Msa1399560:intron | 15.0% |
| !!! | ATTACATCATTTTATACTAT+TGG | - | tig0022379:8975-8994 | Msa1399560:CDS | 15.0% |
| !! | AATAATAAAATATGTTGATG+AGG | - | tig0022379:9683-9702 | Msa1399560:CDS | 15.0% |
| !!! | CAAATTTATTTCTACTCTTT+AGG | - | tig0022379:6598-6617 | Msa1399560:three_prime_UTR | 20.0% |
| !!! | AAAAGCATGAAAATATTTCA+AGG | + | tig0022379:6888-6907 | None:intergenic | 20.0% |
| !! | ATTTCATAAAATCATTGCAT+AGG | + | tig0022379:6948-6967 | None:intergenic | 20.0% |
| !! | TAAAATTAAAGCATATCTGA+AGG | + | tig0022379:7726-7745 | None:intergenic | 20.0% |
| !!! | TATTGATTTTGAAATAAGCT+AGG | + | tig0022379:7749-7768 | None:intergenic | 20.0% |
| !! | AAAAATAGGTAACTTTGAAT+TGG | - | tig0022379:7852-7871 | Msa1399560:CDS | 20.0% |
| !!! | TTTTTGTTTGGAAAATGTTT+AGG | - | tig0022379:7950-7969 | Msa1399560:intron | 20.0% |
| !! | AGTCAAGATAATTTAAAAGT+TGG | - | tig0022379:8022-8041 | Msa1399560:CDS | 20.0% |
| !! | GTCAAGATAATTTAAAAGTT+GGG | - | tig0022379:8023-8042 | Msa1399560:CDS | 20.0% |
| !! | TAAATAGAAATGAACTCATA+AGG | + | tig0022379:8412-8431 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTTTTGTTTGTTG+TGG | - | tig0022379:10010-10029 | Msa1399560:intron | 20.0% |
| !!! | TTGTAGTGTATTTTATTTGA+CGG | - | tig0022379:10521-10540 | Msa1399560:intron | 20.0% |
| !!! | TTAAGTAAATTTGTTAGCAT+TGG | - | tig0022379:10593-10612 | Msa1399560:intron | 20.0% |
| !!! | TAAGTAAATTTGTTAGCATT+GGG | - | tig0022379:10594-10613 | Msa1399560:intron | 20.0% |
| !!! | TAATTTTTATACTTCAGTAC+AGG | - | tig0022379:10626-10645 | Msa1399560:intron | 20.0% |
| !! | ATTATAGAGTAGTGATAAAA+TGG | + | tig0022379:10683-10702 | None:intergenic | 20.0% |
| ! | ATAAAGATTAGTGTTAGAGT+AGG | + | tig0022379:6560-6579 | None:intergenic | 25.0% |
| ! | AAATAAATACAAGGGGAAAT+CGG | + | tig0022379:6741-6760 | None:intergenic | 25.0% |
| ! | ATCAATCAAGTAAGTGTATA+TGG | + | tig0022379:7294-7313 | None:intergenic | 25.0% |
| ! | ACTAGATGACTTGAAAATAT+GGG | - | tig0022379:7372-7391 | Msa1399560:CDS | 25.0% |
| !! | AAATATGGGGTTAAAGTATT+TGG | - | tig0022379:7386-7405 | Msa1399560:CDS | 25.0% |
| !! | ATAATTTGCATTTGGAAGAT+GGG | + | tig0022379:7689-7708 | None:intergenic | 25.0% |
| !! | ACTTACAGATAATTTGCATT+TGG | + | tig0022379:7697-7716 | None:intergenic | 25.0% |
| !!! | TTTTTAGCAATGCATTTTGA+CGG | - | tig0022379:8310-8329 | Msa1399560:intron | 25.0% |
| ! | AGGTATAATATGATAGAACA+AGG | - | tig0022379:8563-8582 | Msa1399560:CDS | 25.0% |
| ! | GGTATAATATGATAGAACAA+GGG | - | tig0022379:8564-8583 | Msa1399560:CDS | 25.0% |
| ! | TTTCATCTTTAGATTGATGT+TGG | - | tig0022379:8814-8833 | Msa1399560:intron | 25.0% |
| ! | AGGCATTTATATATGAAACA+TGG | + | tig0022379:8894-8913 | None:intergenic | 25.0% |
| !!! | CCACTAATTTTTTTTTACAG+TGG | + | tig0022379:8928-8947 | None:intergenic | 25.0% |
| ! | CCACTGTAAAAAAAAATTAG+TGG | - | tig0022379:8925-8944 | Msa1399560:CDS | 25.0% |
| !!! | TTTTTTTGTTAGACTTCGTT+AGG | - | tig0022379:9123-9142 | Msa1399560:intron | 25.0% |
| ! | AAAAATATCATCCATACCTA+TGG | - | tig0022379:9237-9256 | Msa1399560:CDS | 25.0% |
| ! | ATATGGGAATTCATAACTAA+TGG | - | tig0022379:9267-9286 | Msa1399560:CDS | 25.0% |
| ! | TATGGGAATTCATAACTAAT+GGG | - | tig0022379:9268-9287 | Msa1399560:CDS | 25.0% |
| ! | TGATTGTCATTGGAATTTAA+TGG | - | tig0022379:9327-9346 | Msa1399560:intron | 25.0% |
| ! | CATAAGCTATATGTAAAGAA+TGG | + | tig0022379:9355-9374 | None:intergenic | 25.0% |
| ! | TGTTTAGAGAAATGAAACAA+TGG | + | tig0022379:9506-9525 | None:intergenic | 25.0% |
| ! | TTATCCTTTATATCCAAGTA+AGG | - | tig0022379:9741-9760 | Msa1399560:CDS | 25.0% |
| !! | AATATAATTTGTGGCATAGT+TGG | + | tig0022379:9868-9887 | None:intergenic | 25.0% |
| ! | CCAATCTTGAATATAATTTG+TGG | + | tig0022379:9877-9896 | None:intergenic | 25.0% |
| ! | CCACAAATTATATTCAAGAT+TGG | - | tig0022379:9874-9893 | Msa1399560:exon | 25.0% |
| ! | GAGAAATAAACAAAACTTCA+AGG | + | tig0022379:9942-9961 | None:intergenic | 25.0% |
| !!! | AATAATCATTTTTACCAGAG+AGG | + | tig0022379:10129-10148 | None:intergenic | 25.0% |
| !! | TGCATATGATTTTCATTTCA+TGG | - | tig0022379:10169-10188 | Msa1399560:intron | 25.0% |
| !!! | TACCATACAGTTTTTGATTA+TGG | - | tig0022379:10258-10277 | Msa1399560:intron | 25.0% |
| ! | TTCCATAATCAAAAACTGTA+TGG | + | tig0022379:10263-10282 | None:intergenic | 25.0% |
| !! | GATAAAGATTTTCATCTCAA+AGG | - | tig0022379:10343-10362 | Msa1399560:intron | 25.0% |
| ! | GTCAAATAAAATACACTACA+AGG | + | tig0022379:10522-10541 | None:intergenic | 25.0% |
| ! | TGATAAAATGGATGTCATAA+AGG | + | tig0022379:10671-10690 | None:intergenic | 25.0% |
| ! | TTTATCACTACTCTATAATC+AGG | - | tig0022379:10684-10703 | Msa1399560:intron | 25.0% |
| ! | TTATCACTACTCTATAATCA+GGG | - | tig0022379:10685-10704 | Msa1399560:intron | 25.0% |
| CTCTAACACTAATCTTTATC+AGG | - | tig0022379:6561-6580 | Msa1399560:three_prime_UTR | 30.0% | |
| TATTTCAAGGTTAGACTTCA+AGG | + | tig0022379:6875-6894 | None:intergenic | 30.0% | |
| AAAATCATTGCATAGGTCAA+AGG | + | tig0022379:6941-6960 | None:intergenic | 30.0% | |
| GACTAGATGACTTGAAAATA+TGG | - | tig0022379:7371-7390 | Msa1399560:CDS | 30.0% | |
| CTAGATGACTTGAAAATATG+GGG | - | tig0022379:7373-7392 | Msa1399560:CDS | 30.0% | |
| !! | TGAGGATTAGTCTAAAAAGA+AGG | - | tig0022379:7475-7494 | Msa1399560:intron | 30.0% |
| ! | TATCTCGATGCACAATATTT+TGG | - | tig0022379:7591-7610 | Msa1399560:CDS | 30.0% |
| !!! | TATTTTGGTGAGATTGGTAT+TGG | - | tig0022379:7606-7625 | Msa1399560:CDS | 30.0% |
| !! | ATTTTGGTGAGATTGGTATT+GGG | - | tig0022379:7607-7626 | Msa1399560:CDS | 30.0% |
| ! | GATAATTTGCATTTGGAAGA+TGG | + | tig0022379:7690-7709 | None:intergenic | 30.0% |
| TCTAGCACTTACACAAAAAT+AGG | - | tig0022379:7838-7857 | Msa1399560:CDS | 30.0% | |
| ! | CGTATTCAGAAGTTTTTGTT+TGG | - | tig0022379:7938-7957 | Msa1399560:intron | 30.0% |
| GAATATCATCATCAAAGATC+AGG | - | tig0022379:8045-8064 | Msa1399560:CDS | 30.0% | |
| GGAATTTACTGAGATTACAA+AGG | - | tig0022379:8273-8292 | Msa1399560:intron | 30.0% | |
| TTTACTGAGATTACAAAGGA+AGG | - | tig0022379:8277-8296 | Msa1399560:intron | 30.0% | |
| !! | TTTTAGCAATGCATTTTGAC+GGG | - | tig0022379:8311-8330 | Msa1399560:intron | 30.0% |
| ! | CTCAAAAGATTTTCTCACTT+TGG | - | tig0022379:8594-8613 | Msa1399560:CDS | 30.0% |
| !! | TATTGACTGGAGACATTTTA+GGG | - | tig0022379:8667-8686 | Msa1399560:CDS | 30.0% |
| !!! | ACCATGTCATCATTGATTTT+TGG | - | tig0022379:8788-8807 | Msa1399560:intron | 30.0% |
| ACCAAAAATCAATGATGACA+TGG | + | tig0022379:8792-8811 | None:intergenic | 30.0% | |
| CTACTTGAAAACAATTCAAC+AGG | - | tig0022379:8844-8863 | Msa1399560:intron | 30.0% | |
| ATGTTAAGATGTCATACTGT+TGG | + | tig0022379:9094-9113 | None:intergenic | 30.0% | |
| ATGGGAATTCATAACTAATG+GGG | - | tig0022379:9269-9288 | Msa1399560:CDS | 30.0% | |
| !! | TTTTGAGTGTGAGGATAAAA+GGG | + | tig0022379:9307-9326 | None:intergenic | 30.0% |
| !! | ATTTTGAGTGTGAGGATAAA+AGG | + | tig0022379:9308-9327 | None:intergenic | 30.0% |
| ACACTCAAAATGATTGTCAT+TGG | - | tig0022379:9317-9336 | Msa1399560:intron | 30.0% | |
| AAATAATAAAGAGGAAGGGA+TGG | + | tig0022379:9472-9491 | None:intergenic | 30.0% | |
| ATCCCTTCCTCTTTATTATT+TGG | - | tig0022379:9471-9490 | Msa1399560:intron | 30.0% | |
| CTCCAAATAATAAAGAGGAA+GGG | + | tig0022379:9476-9495 | None:intergenic | 30.0% | |
| TCTCCAAATAATAAAGAGGA+AGG | + | tig0022379:9477-9496 | None:intergenic | 30.0% | |
| AAGTCCTTACTTGGATATAA+AGG | + | tig0022379:9748-9767 | None:intergenic | 30.0% | |
| AAATTTGTCAAGTCCTTACT+TGG | + | tig0022379:9757-9776 | None:intergenic | 30.0% | |
| TTTATAAATGATTGTCCCAC+TGG | + | tig0022379:9832-9851 | None:intergenic | 30.0% | |
| TATGTACTAAGAGTTGAAGA+AGG | - | tig0022379:10045-10064 | Msa1399560:intron | 30.0% | |
| ATGTACTAAGAGTTGAAGAA+GGG | - | tig0022379:10046-10065 | Msa1399560:intron | 30.0% | |
| TTTCATTTCATGGTGTATGA+TGG | - | tig0022379:10179-10198 | Msa1399560:intron | 30.0% | |
| GTTCTTGGAGATATATTTCT+GGG | - | tig0022379:10231-10250 | Msa1399560:intron | 30.0% | |
| ! | TTCTTGGAGATATATTTCTG+GGG | - | tig0022379:10232-10251 | Msa1399560:intron | 30.0% |
| ! | GTCCTCTAAAAAAATCTCAA+AGG | - | tig0022379:10365-10384 | Msa1399560:intron | 30.0% |
| !!! | GACCTTTGAGATTTTTTTAG+AGG | + | tig0022379:10370-10389 | None:intergenic | 30.0% |
| !! | AAAAATTATTTTGCACCAGC+CGG | - | tig0022379:10424-10443 | Msa1399560:intron | 30.0% |
| GACTTGCATCATTACTCTTT+AGG | - | tig0022379:6652-6671 | Msa1399560:three_prime_UTR | 35.0% | |
| TTACTCTTTAGGCTTGTCTT+CGG | - | tig0022379:6663-6682 | Msa1399560:three_prime_UTR | 35.0% | |
| CAAGATGCACTAACAAGTTT+GGG | + | tig0022379:6775-6794 | None:intergenic | 35.0% | |
| AATATGCTTTAGCGTATGCT+TGG | - | tig0022379:7023-7042 | Msa1399560:CDS | 35.0% | |
| GCTGAAACTGTGATTAACAT+TGG | - | tig0022379:7349-7368 | Msa1399560:intron | 35.0% | |
| CTTCTGCAACTTCTAATGAA+GGG | - | tig0022379:7448-7467 | Msa1399560:CDS | 35.0% | |
| CTTCTAATGAAGGGTTAATG+AGG | - | tig0022379:7457-7476 | Msa1399560:intron | 35.0% | |
| ! | TTAACGCTCTAAATTCTGCA+AGG | - | tig0022379:7508-7527 | Msa1399560:intron | 35.0% |
| !!! | GCACAATATTTTGGTGAGAT+TGG | - | tig0022379:7600-7619 | Msa1399560:CDS | 35.0% |
| ! | AACACCACTTTGAAGATTTG+TGG | + | tig0022379:7639-7658 | None:intergenic | 35.0% |
| TTCAAAGTGGTGTTTGATAC+TGG | - | tig0022379:7645-7664 | Msa1399560:CDS | 35.0% | |
| TCAAAGTGGTGTTTGATACT+GGG | - | tig0022379:7646-7665 | Msa1399560:CDS | 35.0% | |
| GCTACATTCATTCCAAGTAT+AGG | - | tig0022379:7806-7825 | Msa1399560:intron | 35.0% | |
| TAACACACACTTCACATTGA+AGG | - | tig0022379:8143-8162 | Msa1399560:intron | 35.0% | |
| TAATCTCAGTAAATTCCTGC+AGG | + | tig0022379:8270-8289 | None:intergenic | 35.0% | |
| GATTACAAAGGAAGGATCTT+TGG | - | tig0022379:8285-8304 | Msa1399560:intron | 35.0% | |
| GGATTCCAAGATATTTCAGT+TGG | - | tig0022379:8346-8365 | Msa1399560:intron | 35.0% | |
| CTTGTCCAACTGAAATATCT+TGG | + | tig0022379:8354-8373 | None:intergenic | 35.0% | |
| TATATGCTAAGTTACCACAC+TGG | + | tig0022379:8382-8401 | None:intergenic | 35.0% | |
| ! | CAATGTTTGAATCTGGGTTT+TGG | + | tig0022379:8625-8644 | None:intergenic | 35.0% |
| CAAAACCCAGATTCAAACAT+TGG | - | tig0022379:8623-8642 | Msa1399560:CDS | 35.0% | |
| !!! | GTATTGACTGGAGACATTTT+AGG | - | tig0022379:8666-8685 | Msa1399560:CDS | 35.0% |
| ! | ATTGACTGGAGACATTTTAG+GGG | - | tig0022379:8668-8687 | Msa1399560:CDS | 35.0% |
| GAGAAACTGGAACATAAGTA+TGG | + | tig0022379:8697-8716 | None:intergenic | 35.0% | |
| TTATGTTCCAGTTTCTCAAC+AGG | - | tig0022379:8700-8719 | Msa1399560:intron | 35.0% | |
| TATGTTCCAGTTTCTCAACA+GGG | - | tig0022379:8701-8720 | Msa1399560:intron | 35.0% | |
| AAATCAATAGGGCTATGTCA+AGG | - | tig0022379:9022-9041 | Msa1399560:intron | 35.0% | |
| TCAGGAACATCTTTAATTGC+TGG | - | tig0022379:9067-9086 | Msa1399560:intron | 35.0% | |
| ACTCAAATTAACCATGCCAT+TGG | - | tig0022379:9186-9205 | Msa1399560:intron | 35.0% | |
| ATATCGAATCACCATAGGTA+TGG | + | tig0022379:9251-9270 | None:intergenic | 35.0% | |
| ATACCTATGGTGATTCGATA+TGG | - | tig0022379:9250-9269 | Msa1399560:CDS | 35.0% | |
| TACCTATGGTGATTCGATAT+GGG | - | tig0022379:9251-9270 | Msa1399560:CDS | 35.0% | |
| !! | TGACAATCATTTTGAGTGTG+AGG | + | tig0022379:9316-9335 | None:intergenic | 35.0% |
| ATGTCGACGCATATAATTTC+AGG | + | tig0022379:9391-9410 | None:intergenic | 35.0% | |
| ! | GAAATTATATGCGTCGACAT+TGG | - | tig0022379:9391-9410 | Msa1399560:intron | 35.0% |
| TGCGTCTCCAAATAATAAAG+AGG | + | tig0022379:9481-9500 | None:intergenic | 35.0% | |
| CAGTGATGATATTGAAACAG+TGG | - | tig0022379:9545-9564 | Msa1399560:intron | 35.0% | |
| ATGTCGCATAAAGTACACAA+GGG | + | tig0022379:9612-9631 | None:intergenic | 35.0% | |
| ! | TATGCGACATGATTGTGTTT+TGG | - | tig0022379:9622-9641 | Msa1399560:CDS | 35.0% |
| ! | TCTCACATAACTTTTGCACA+AGG | + | tig0022379:9798-9817 | None:intergenic | 35.0% |
| AGGTAAAATTGTACCTGTTC+TGG | + | tig0022379:9922-9941 | None:intergenic | 35.0% | |
| CATGGTGTATGATGGTTAAT+TGG | - | tig0022379:10187-10206 | Msa1399560:intron | 35.0% | |
| GGTTCTTGGAGATATATTTC+TGG | - | tig0022379:10230-10249 | Msa1399560:intron | 35.0% | |
| !! | TCTTGGAGATATATTTCTGG+GGG | - | tig0022379:10233-10252 | Msa1399560:intron | 35.0% |
| GGTCAGCAATAGCAATAAAT+AGG | - | tig0022379:10386-10405 | Msa1399560:intron | 35.0% | |
| CAATAAATAGGCTGTCTCAT+GGG | - | tig0022379:10398-10417 | Msa1399560:intron | 35.0% | |
| AATAAATAGGCTGTCTCATG+GGG | - | tig0022379:10399-10418 | Msa1399560:intron | 35.0% | |
| !! | AAAATTATTTTGCACCAGCC+GGG | - | tig0022379:10425-10444 | Msa1399560:intron | 35.0% |
| ACTCTTTAGGCTTGTCTATG+CGG | - | tig0022379:6611-6630 | Msa1399560:three_prime_UTR | 40.0% | |
| ATGCACTAACAAGTTTGGGT+GGG | + | tig0022379:6771-6790 | None:intergenic | 40.0% | |
| GCAAGATGCACTAACAAGTT+TGG | + | tig0022379:6776-6795 | None:intergenic | 40.0% | |
| ! | ACTTGTTAGTGCATCTTGCA+CGG | - | tig0022379:6777-6796 | Msa1399560:three_prime_UTR | 40.0% |
| ! | GCGTATGCTTGGTTCATTTT+TGG | - | tig0022379:7034-7053 | Msa1399560:intron | 40.0% |
| !!! | GCTTGGTTCATTTTTGGAGT+TGG | - | tig0022379:7040-7059 | Msa1399560:intron | 40.0% |
| GTCATCTTTAGTTGTTCTCG+AGG | - | tig0022379:7076-7095 | Msa1399560:intron | 40.0% | |
| ! | TAAGTGTATATGGCTCTGCA+TGG | + | tig0022379:7284-7303 | None:intergenic | 40.0% |
| ATTAGAAGTTGCAGAAGCCA+AGG | + | tig0022379:7445-7464 | None:intergenic | 40.0% | |
| GCTTCTGCAACTTCTAATGA+AGG | - | tig0022379:7447-7466 | Msa1399560:CDS | 40.0% | |
| ACCTCCACAAATCTTCAAAG+TGG | - | tig0022379:7632-7651 | Msa1399560:CDS | 40.0% | |
| ! | ACCACTTTGAAGATTTGTGG+AGG | + | tig0022379:7636-7655 | None:intergenic | 40.0% |
| AGATAGCTTGGACCTATACT+TGG | + | tig0022379:7821-7840 | None:intergenic | 40.0% | |
| TGTGTAAGTGCTAGATAGCT+TGG | + | tig0022379:7833-7852 | None:intergenic | 40.0% | |
| TTATCTTGACTGAAGAAGCC+AGG | + | tig0022379:8013-8032 | None:intergenic | 40.0% | |
| !! | ATGCATTTTGACGGGATACT+TGG | - | tig0022379:8319-8338 | Msa1399560:intron | 40.0% |
| ! | TATGATAGAACAAGGGCACA+TGG | - | tig0022379:8571-8590 | Msa1399560:CDS | 40.0% |
| AACCCAGATTCAAACATTGG+AGG | - | tig0022379:8626-8645 | Msa1399560:CDS | 40.0% | |
| CACCTCCAATGTTTGAATCT+GGG | + | tig0022379:8631-8650 | None:intergenic | 40.0% | |
| TCACCTCCAATGTTTGAATC+TGG | + | tig0022379:8632-8651 | None:intergenic | 40.0% | |
| ATTGGAGGTGAGATTGTGTT+TGG | - | tig0022379:8641-8660 | Msa1399560:CDS | 40.0% | |
| !! | TTGTGTTTGGTGGTATTGAC+TGG | - | tig0022379:8654-8673 | Msa1399560:CDS | 40.0% |
| TTACAGTGGAGTACAGTACA+AGG | + | tig0022379:8914-8933 | None:intergenic | 40.0% | |
| TGTTCCTGAGTCAATAATCG+CGG | + | tig0022379:9056-9075 | None:intergenic | 40.0% | |
| ! | TAGTTCTTGTTTGCAGAGTG+TGG | - | tig0022379:9161-9180 | Msa1399560:intron | 40.0% |
| AACATATCCTTCAGCTCCAA+TGG | + | tig0022379:9205-9224 | None:intergenic | 40.0% | |
| TTCCCATATCGAATCACCAT+AGG | + | tig0022379:9256-9275 | None:intergenic | 40.0% | |
| AGTGGTAGACGATGAAAGTT+GGG | - | tig0022379:9563-9582 | Msa1399560:intron | 40.0% | |
| TTGGGATGAGACACAAAGTA+GGG | - | tig0022379:9581-9600 | Msa1399560:CDS | 40.0% | |
| TGTCGCATAAAGTACACAAG+GGG | + | tig0022379:9611-9630 | None:intergenic | 40.0% | |
| CATGTCGCATAAAGTACACA+AGG | + | tig0022379:9613-9632 | None:intergenic | 40.0% | |
| TTCTCTGCTTAAGCTGAACT+TGG | + | tig0022379:9650-9669 | None:intergenic | 40.0% | |
| AATGATTGTCCCACTGGATT+GGG | + | tig0022379:9826-9845 | None:intergenic | 40.0% | |
| AAATGATTGTCCCACTGGAT+TGG | + | tig0022379:9827-9846 | None:intergenic | 40.0% | |
| ATTTCCTCTATCTCCAGAAC+AGG | - | tig0022379:9906-9925 | Msa1399560:five_prime_UTR | 40.0% | |
| TGATGGTTAATTGGAGTGTG+TGG | - | tig0022379:10196-10215 | Msa1399560:intron | 40.0% | |
| TGATTATGGAAATCTCCGTG+TGG | - | tig0022379:10272-10291 | Msa1399560:intron | 40.0% | |
| GATTATGGAAATCTCCGTGT+GGG | - | tig0022379:10273-10292 | Msa1399560:intron | 40.0% | |
| TGAAGCTGCATAGACTTAGT+AGG | - | tig0022379:10302-10321 | Msa1399560:intron | 40.0% | |
| GCAATAAATAGGCTGTCTCA+TGG | - | tig0022379:10397-10416 | Msa1399560:intron | 40.0% | |
| ! | TCTATGCGGTGGTTTGTCAT+TGG | - | tig0022379:6625-6644 | Msa1399560:three_prime_UTR | 45.0% |
| TTTAGGCTTGTCTTCGGACT+GGG | - | tig0022379:6669-6688 | Msa1399560:three_prime_UTR | 45.0% | |
| !!! | GGACTGGGGTGGTTTTTTAA+GGG | - | tig0022379:6684-6703 | Msa1399560:three_prime_UTR | 45.0% |
| !!! | GACTGGGGTGGTTTTTTAAG+GGG | - | tig0022379:6685-6704 | Msa1399560:three_prime_UTR | 45.0% |
| GATGCACTAACAAGTTTGGG+TGG | + | tig0022379:6772-6791 | None:intergenic | 45.0% | |
| CTTGTTAGTGCATCTTGCAC+GGG | - | tig0022379:6778-6797 | Msa1399560:three_prime_UTR | 45.0% | |
| AGTTTCAGCAGAAGCAACGA+AGG | + | tig0022379:7338-7357 | None:intergenic | 45.0% | |
| TGGTAACTGTGATCTGCTTG+TGG | - | tig0022379:7406-7425 | Msa1399560:CDS | 45.0% | |
| GGTAACTGTGATCTGCTTGT+GGG | - | tig0022379:7407-7426 | Msa1399560:CDS | 45.0% | |
| AAGTTGCAGAAGCCAAGGAT+TGG | + | tig0022379:7440-7459 | None:intergenic | 45.0% | |
| ATACTGGGAGCTCCAATCTT+TGG | - | tig0022379:7661-7680 | Msa1399560:CDS | 45.0% | |
| TACTGGGAGCTCCAATCTTT+GGG | - | tig0022379:7662-7681 | Msa1399560:CDS | 45.0% | |
| ! | TGCAAAATCCCTTTTAGCCG+TGG | - | tig0022379:7980-7999 | Msa1399560:intron | 45.0% |
| GAATGTGTCCACGGCTAAAA+GGG | + | tig0022379:7991-8010 | None:intergenic | 45.0% | |
| ! | TCATAGTGCTGAAATCCTGC+AGG | - | tig0022379:8252-8271 | Msa1399560:intron | 45.0% |
| TTTGACGGGATACTTGGACT+TGG | - | tig0022379:8325-8344 | Msa1399560:intron | 45.0% | |
| CAATAGCCCTGTTGAGAAAC+TGG | + | tig0022379:8710-8729 | None:intergenic | 45.0% | |
| CAGTTTCTCAACAGGGCTAT+TGG | - | tig0022379:8708-8727 | Msa1399560:intron | 45.0% | |
| TCAATAGGGCTATGTCAAGG+TGG | - | tig0022379:9025-9044 | Msa1399560:intron | 45.0% | |
| ATTGGACTCTGCTCACGTAA+TGG | - | tig0022379:9409-9428 | Msa1399560:intron | 45.0% | |
| CAGTGGTAGACGATGAAAGT+TGG | - | tig0022379:9562-9581 | Msa1399560:intron | 45.0% | |
| GTTGGGATGAGACACAAAGT+AGG | - | tig0022379:9580-9599 | Msa1399560:CDS | 45.0% | |
| !! | TGTACCTGTTCTGGAGATAG+AGG | + | tig0022379:9913-9932 | None:intergenic | 45.0% |
| TGTTCTAGTGTCTGCTATGG+AGG | - | tig0022379:10069-10088 | Msa1399560:intron | 45.0% | |
| !! | GTCTGCTATGGAGGTTTTGT+TGG | - | tig0022379:10078-10097 | Msa1399560:intron | 45.0% |
| CTATTCTACCACTAGACCAC+TGG | - | tig0022379:10480-10499 | Msa1399560:intron | 45.0% | |
| !! | ACTAAGCACAAAAGCACCAG+TGG | + | tig0022379:10499-10518 | None:intergenic | 45.0% |
| CTATAATCAGGGTCGTCTCT+AGG | - | tig0022379:10696-10715 | Msa1399560:intron | 45.0% | |
| TCTCTAGGTAATTGGAGGCT+CGG | - | tig0022379:10711-10730 | Msa1399560:five_prime_UTR | 45.0% | |
| !!! | TTTTATAATTTTTTTTGTAA+AGG | + | tig0022379:8468-8487 | None:intergenic | 5.0% |
| !! | ATATAAAAATTAAATCAATA+GGG | - | tig0022379:9011-9030 | Msa1399560:intron | 5.0% |
| CTTTAGGCTTGTCTATGCGG+TGG | - | tig0022379:6614-6633 | Msa1399560:three_prime_UTR | 50.0% | |
| CTTTAGGCTTGTCTTCGGAC+TGG | - | tig0022379:6668-6687 | Msa1399560:three_prime_UTR | 50.0% | |
| TTAGGCTTGTCTTCGGACTG+GGG | - | tig0022379:6670-6689 | Msa1399560:three_prime_UTR | 50.0% | |
| !!! | CGGACTGGGGTGGTTTTTTA+AGG | - | tig0022379:6683-6702 | Msa1399560:three_prime_UTR | 50.0% |
| ! | CTCGAGGAGAGTTGATTGTG+TGG | - | tig0022379:7092-7111 | Msa1399560:intron | 50.0% |
| GGAAGATGGGACCCAAAGAT+TGG | + | tig0022379:7676-7695 | None:intergenic | 50.0% | |
| GGAATGTGTCCACGGCTAAA+AGG | + | tig0022379:7992-8011 | None:intergenic | 50.0% | |
| TTTAGCCGTGGACACATTCC+TGG | - | tig0022379:7992-8011 | Msa1399560:CDS | 50.0% | |
| AGAAGCCAGGAATGTGTCCA+CGG | + | tig0022379:8000-8019 | None:intergenic | 50.0% | |
| ATTGACACTCACAGACGCGT+TGG | + | tig0022379:8229-8248 | None:intergenic | 50.0% | |
| TTGGACAAGTCACACCAGTG+TGG | - | tig0022379:8365-8384 | Msa1399560:intron | 50.0% | |
| GGAGGTGAGATTGTGTTTGG+TGG | - | tig0022379:8644-8663 | Msa1399560:CDS | 50.0% | |
| TTCTCAACAGGGCTATTGGC+AGG | - | tig0022379:8712-8731 | Msa1399560:intron | 50.0% | |
| !! | TGTGCCGCGATTATTGACTC+AGG | - | tig0022379:9049-9068 | Msa1399560:intron | 50.0% |
| AACCATGCCATTGGAGCTGA+AGG | - | tig0022379:9195-9214 | Msa1399560:intron | 50.0% | |
| ATCCTTCAGCTCCAATGGCA+TGG | + | tig0022379:9200-9219 | None:intergenic | 50.0% | |
| TGAGAAGCTACCCAATCCAG+TGG | - | tig0022379:9813-9832 | Msa1399560:CDS | 50.0% | |
| GAGAAGCTACCCAATCCAGT+GGG | - | tig0022379:9814-9833 | Msa1399560:CDS | 50.0% | |
| GGGTGTTCTAGTGTCTGCTA+TGG | - | tig0022379:10066-10085 | Msa1399560:intron | 50.0% | |
| TATAGATGTGCCTCCTCCAC+AGG | - | tig0022379:10101-10120 | Msa1399560:intron | 50.0% | |
| ATAGATGTGCCTCCTCCACA+GGG | - | tig0022379:10102-10121 | Msa1399560:intron | 50.0% | |
| ! | TTTTACCAGAGAGGACCCTG+TGG | + | tig0022379:10120-10139 | None:intergenic | 50.0% |
| GAGTGTGTGGTTGCAATGCA+GGG | - | tig0022379:10209-10228 | Msa1399560:intron | 50.0% | |
| TGGTTGCAATGCAGGGTTCT+TGG | - | tig0022379:10216-10235 | Msa1399560:intron | 50.0% | |
| CAGCTTCAGCAAATCCCACA+CGG | + | tig0022379:10290-10309 | None:intergenic | 50.0% | |
| GGTAGAATAGTACCCTGCCA+CGG | + | tig0022379:10470-10489 | None:intergenic | 50.0% | |
| !! | CAAAAGCACCAGTGGTCTAG+TGG | + | tig0022379:10491-10510 | None:intergenic | 50.0% |
| CAGGGTCGTCTCTAGGTAAT+TGG | - | tig0022379:10703-10722 | Msa1399560:five_prime_UTR | 50.0% | |
| GGTCGTCTCTAGGTAATTGG+AGG | - | tig0022379:10706-10725 | Msa1399560:five_prime_UTR | 50.0% | |
| TGTTCGAGCCGTCGTCTTTG+CGG | - | tig0022379:6712-6731 | Msa1399560:three_prime_UTR | 55.0% | |
| ATCGGTTGCCGCAAAGACGA+CGG | + | tig0022379:6723-6742 | None:intergenic | 55.0% | |
| TGCATCTTGCACGGGCTTGT+TGG | - | tig0022379:6786-6805 | Msa1399560:three_prime_UTR | 55.0% | |
| CTGTGATCTGCTTGTGGGCT+TGG | - | tig0022379:7412-7431 | Msa1399560:CDS | 55.0% | |
| ! | GTGGGCTTGGTTCCAATCCT+TGG | - | tig0022379:7425-7444 | Msa1399560:CDS | 55.0% |
| GGAGTGTGTGGTTGCAATGC+AGG | - | tig0022379:10208-10227 | Msa1399560:intron | 55.0% | |
| TACCAGAGAGGACCCTGTGG+AGG | + | tig0022379:10117-10136 | None:intergenic | 60.0% | |
| ACAGACCCGGGTTCGATTCC+CGG | + | tig0022379:10446-10465 | None:intergenic | 60.0% | |
| ! | GGCTTGTCTTCGGACTGGGG+TGG | - | tig0022379:6673-6692 | Msa1399560:three_prime_UTR | 65.0% |
| CAGAGAGGACCCTGTGGAGG+AGG | + | tig0022379:10114-10133 | None:intergenic | 65.0% | |
| CTCCTCCACAGGGTCCTCTC+TGG | - | tig0022379:10112-10131 | Msa1399560:intron | 65.0% | |
| CACCAGCCGGGAATCGAACC+CGG | - | tig0022379:10437-10456 | Msa1399560:intron | 65.0% | |
| ACCAGCCGGGAATCGAACCC+GGG | - | tig0022379:10438-10457 | Msa1399560:intron | 65.0% | |
| TCGAACCCGGGTCTGTACCG+TGG | - | tig0022379:10450-10469 | Msa1399560:intron | 65.0% | |
| ACCCTGCCACGGTACAGACC+CGG | + | tig0022379:10459-10478 | None:intergenic | 65.0% | |
| ACCCGGGTTCGATTCCCGGC+TGG | + | tig0022379:10442-10461 | None:intergenic | 70.0% | |
| ACCCGGGTCTGTACCGTGGC+AGG | - | tig0022379:10454-10473 | Msa1399560:intron | 70.0% | |
| CCCTGCCACGGTACAGACCC+GGG | + | tig0022379:10458-10477 | None:intergenic | 70.0% | |
| CCCGGGTCTGTACCGTGGCA+GGG | - | tig0022379:10455-10474 | Msa1399560:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022379 | gene | 6532 | 10750 | 6532 | ID=Msa1399560;Name=Msa1399560 |
| tig0022379 | mRNA | 6532 | 10750 | 6532 | ID=Msa1399560-mRNA-1;Parent=Msa1399560;Name=Msa1399560-mRNA-1;_AED=0.14;_eAED=0.14;_QI=111|1|1|1|0.92|0.85|14|436|497 |
| tig0022379 | exon | 6532 | 7052 | 6532 | ID=Msa1399560-mRNA-1:exon:17311;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 7149 | 7237 | 7149 | ID=Msa1399560-mRNA-1:exon:17310;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 7355 | 7474 | 7355 | ID=Msa1399560-mRNA-1:exon:17309;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 7578 | 7734 | 7578 | ID=Msa1399560-mRNA-1:exon:17308;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 7836 | 7900 | 7836 | ID=Msa1399560-mRNA-1:exon:17307;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 7992 | 8105 | 7992 | ID=Msa1399560-mRNA-1:exon:17306;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 8186 | 8250 | 8186 | ID=Msa1399560-mRNA-1:exon:17305;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 8417 | 8456 | 8417 | ID=Msa1399560-mRNA-1:exon:17304;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 8549 | 8717 | 8549 | ID=Msa1399560-mRNA-1:exon:17303;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 8896 | 9008 | 8896 | ID=Msa1399560-mRNA-1:exon:17302;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 9216 | 9310 | 9216 | ID=Msa1399560-mRNA-1:exon:17301;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 9423 | 9483 | 9423 | ID=Msa1399560-mRNA-1:exon:17300;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 9572 | 9952 | 9572 | ID=Msa1399560-mRNA-1:exon:17299;Parent=Msa1399560-mRNA-1 |
| tig0022379 | exon | 10700 | 10750 | 10700 | ID=Msa1399560-mRNA-1:exon:17298;Parent=Msa1399560-mRNA-1 |
| tig0022379 | five_prime_UTR | 10700 | 10750 | 10700 | ID=Msa1399560-mRNA-1:five_prime_utr;Parent=Msa1399560-mRNA-1 |
| tig0022379 | five_prime_UTR | 9893 | 9952 | 9893 | ID=Msa1399560-mRNA-1:five_prime_utr;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 9572 | 9892 | 9572 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 9423 | 9483 | 9423 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 9216 | 9310 | 9216 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 8896 | 9008 | 8896 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 8549 | 8717 | 8549 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 8417 | 8456 | 8417 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 8186 | 8250 | 8186 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 7992 | 8105 | 7992 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 7836 | 7900 | 7836 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 7578 | 7734 | 7578 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 7355 | 7474 | 7355 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 7149 | 7237 | 7149 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | CDS | 6968 | 7052 | 6968 | ID=Msa1399560-mRNA-1:cds;Parent=Msa1399560-mRNA-1 |
| tig0022379 | three_prime_UTR | 6532 | 6967 | 6532 | ID=Msa1399560-mRNA-1:three_prime_utr;Parent=Msa1399560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
