Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966630 | XP_013453212.1 | 97.273 | 220 | 6 | 0 | 1 | 220 | 1 | 220 | 3.63e-150 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966630 | sp|O82197|VP321_ARATH | 81.982 | 222 | 29 | 5 | 1 | 220 | 1 | 213 | 2.11e-109 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043730 | Msa0966630 | 0.803620 | 3.195194e-49 | -8.615850e-47 |
| Msa0629650 | Msa0966630 | 0.809749 | 1.622407e-50 | -8.615850e-47 |
| Msa0679550 | Msa0966630 | 0.806028 | 1.003382e-49 | -8.615850e-47 |
| Msa0124550 | Msa0966630 | 0.817401 | 3.360742e-52 | -8.615850e-47 |
| Msa0130520 | Msa0966630 | 0.818740 | 1.673937e-52 | -8.615850e-47 |
| Msa0202930 | Msa0966630 | 0.817521 | 3.158527e-52 | -8.615850e-47 |
| Msa0284450 | Msa0966630 | 0.826646 | 2.420237e-54 | -8.615850e-47 |
| Msa0307560 | Msa0966630 | 0.800729 | 1.257153e-48 | -8.615850e-47 |
| Msa0532540 | Msa0966630 | 0.806836 | 6.779380e-50 | -8.615850e-47 |
| Msa0589390 | Msa0966630 | 0.806930 | 6.474690e-50 | -8.615850e-47 |
| Msa0876360 | Msa0966630 | 0.809379 | 1.948112e-50 | -8.615850e-47 |
| Msa0877710 | Msa0966630 | 0.817463 | 3.254893e-52 | -8.615850e-47 |
| Msa0901320 | Msa0966630 | 0.862191 | 6.033199e-64 | -8.615850e-47 |
| Msa0925870 | Msa0966630 | 0.866577 | 2.575743e-65 | -8.615850e-47 |
| Msa0941540 | Msa0966630 | 0.844275 | 8.359858e-59 | -8.615850e-47 |
| Msa0960240 | Msa0966630 | 0.802793 | 4.739041e-49 | -8.615850e-47 |
| Msa0966630 | Msa1001080 | 0.920615 | 1.022221e-87 | -8.615850e-47 |
| Msa0966630 | Msa1115280 | 0.802386 | 5.750773e-49 | -8.615850e-47 |
| Msa0966630 | Msa1276510 | 0.805050 | 1.609579e-49 | -8.615850e-47 |
| Msa0966630 | Msa1301650 | 0.801400 | 9.166741e-49 | -8.615850e-47 |
| Msa0966630 | Msa1314770 | 0.810734 | 9.948751e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966630 | MtrunA17_Chr6g0487521 | 97.273 | 220 | 6 | 0 | 1 | 220 | 1 | 220 | 3.34e-154 | 426 |
| Msa0966630 | MtrunA17_Chr8g0389481 | 83.182 | 220 | 35 | 2 | 1 | 220 | 5 | 222 | 2.53e-109 | 313 |
| Msa0966630 | MtrunA17_Chr8g0389471 | 76.818 | 220 | 48 | 2 | 1 | 220 | 5 | 221 | 8.19e-96 | 278 |
| Msa0966630 | MtrunA17_Chr1g0197041 | 29.577 | 213 | 127 | 6 | 4 | 194 | 3 | 214 | 6.83e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966630 | AT2G19830.2 | 81.982 | 222 | 29 | 5 | 1 | 220 | 1 | 213 | 2.15e-110 | 315 |
| Msa0966630 | AT4G29160.1 | 85.068 | 221 | 30 | 2 | 1 | 220 | 1 | 219 | 4.68e-110 | 315 |
| Msa0966630 | AT4G29160.3 | 85.068 | 221 | 30 | 2 | 1 | 220 | 1 | 219 | 4.68e-110 | 315 |
| Msa0966630 | AT2G19830.1 | 82.828 | 198 | 26 | 3 | 24 | 220 | 4 | 194 | 1.42e-98 | 285 |
| Msa0966630 | AT4G29160.2 | 86.667 | 180 | 23 | 1 | 42 | 220 | 13 | 192 | 6.89e-96 | 278 |
| Msa0966630 | AT5G04850.1 | 29.143 | 175 | 111 | 3 | 4 | 169 | 3 | 173 | 4.42e-13 | 66.6 |
| Msa0966630 | AT3G10640.1 | 29.778 | 225 | 113 | 7 | 4 | 194 | 3 | 216 | 8.83e-13 | 65.9 |
| Msa0966630 | AT5G04850.2 | 28.313 | 166 | 106 | 3 | 4 | 160 | 3 | 164 | 8.57e-11 | 60.5 |
Find 79 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGCATATGTTGATTTAT+AGG | 0.212646 | 6_3:-95155954 | Msa0966630:three_prime_UTR |
| ATTTGTAGACCACAAATATT+TGG | 0.219995 | 6_3:+95155813 | None:intergenic |
| TATTTAACTCAAAATGATTT+AGG | 0.228374 | 6_3:+95155869 | None:intergenic |
| TCCTCAGGAGTCGGCTTTGC+AGG | 0.229972 | 6_3:+95156515 | None:intergenic |
| AGATGAATTGGCAGCTTTGC+AGG | 0.277136 | 6_3:-95156492 | Msa0966630:CDS |
| ACTAGAAATGCTCGAGAAAA+AGG | 0.286111 | 6_3:-95157863 | Msa0966630:CDS |
| TTGAATCTGCTTCATGTTCT+CGG | 0.295683 | 6_3:+95157202 | None:intergenic |
| GGAAAATGTACTCCTTAAAA+AGG | 0.296574 | 6_3:-95157842 | Msa0966630:CDS |
| CCATAAGCATTACTTCATAT+TGG | 0.307978 | 6_3:-95155782 | Msa0966630:three_prime_UTR |
| CACCAAAAGAAAGAACAAAA+AGG | 0.308755 | 6_3:-95157788 | Msa0966630:CDS |
| CGTTGAAAATTGAATCGGTT+TGG | 0.309795 | 6_3:+95161202 | None:intergenic |
| CCAATATGAAGTAATGCTTA+TGG | 0.332702 | 6_3:+95155782 | None:intergenic |
| GGAAGCAGAACTTGAAGAAT+TGG | 0.342673 | 6_3:-95156636 | Msa0966630:CDS |
| TTGCTGGATGTGTCTTGTTT+AGG | 0.352010 | 6_3:+95161103 | None:intergenic |
| CGTGCAGGTTGCCTCCCAGC+TGG | 0.353565 | 6_3:+95156545 | None:intergenic |
| CCCACAGTGCACGTCCCAGC+TGG | 0.353629 | 6_3:-95156560 | Msa0966630:CDS |
| CGATGATGATGATGGATGTT+TGG | 0.356055 | 6_3:+95161293 | None:intergenic |
| CTCGTTTAATTTGTCTAAAG+TGG | 0.361888 | 6_3:+95161072 | None:intergenic |
| AGAAAGATTAGATTAGAAGT+TGG | 0.364338 | 6_3:+95161233 | None:intergenic |
| GAAAGATTAGATTAGAAGTT+GGG | 0.373204 | 6_3:+95161234 | None:intergenic |
| TAAAGTGGCAAGAGCATTGC+TGG | 0.395234 | 6_3:+95161087 | None:intergenic |
| GGAGTCGGCTTTGCAGGAAC+AGG | 0.397015 | 6_3:+95156521 | None:intergenic |
| GTATCGAACATGGATTCATT+TGG | 0.411145 | 6_3:-95156000 | Msa0966630:three_prime_UTR |
| GACTCCTGAGGAAGATGAAT+TGG | 0.412289 | 6_3:-95156504 | Msa0966630:CDS |
| ATCTTCGTCAATCTTCGCCT+TGG | 0.433314 | 6_3:-95161330 | Msa0966630:five_prime_UTR |
| TGGGATCTGGCGATCTGGAT+TGG | 0.438202 | 6_3:+95161253 | None:intergenic |
| GAAGTTGGGATCTGGCGATC+TGG | 0.442572 | 6_3:+95161248 | None:intergenic |
| GGAGCAGGAGCTGTAGTTGC+TGG | 0.442696 | 6_3:+95156581 | None:intergenic |
| CCAGTTGCGTATTCATGACC+AGG | 0.454482 | 6_3:-95157621 | Msa0966630:intron |
| GGGATCTGGCGATCTGGATT+GGG | 0.454946 | 6_3:+95161254 | None:intergenic |
| TGCGTGCCACGTGGAAATAA+AGG | 0.455637 | 6_3:-95161374 | Msa0966630:five_prime_UTR |
| TTGTTCTTTACAGGACGAAC+TGG | 0.460844 | 6_3:-95156657 | Msa0966630:intron |
| GCAGATTCAAGAAGCATTGT+CGG | 0.464581 | 6_3:-95157189 | Msa0966630:CDS |
| AGAATTGGAGAGTGCTGAGT+TGG | 0.466125 | 6_3:-95156621 | Msa0966630:CDS |
| ACGGTAGATGCGTTAAGAAC+AGG | 0.469044 | 6_3:-95157472 | Msa0966630:CDS |
| AAATCAGCAGCAGCACCAAT+TGG | 0.472619 | 6_3:+95157164 | None:intergenic |
| TTCAATGTTTGAAGAGGAAG+AGG | 0.475427 | 6_3:-95157679 | Msa0966630:CDS |
| CCAGCTGGGACGTGCACTGT+GGG | 0.476274 | 6_3:+95156560 | None:intergenic |
| TGCTAAAGCCACCACGGAAA+CGG | 0.478535 | 6_3:-95157491 | Msa0966630:CDS |
| GGGACGTGCACTGTGGGAGC+AGG | 0.480823 | 6_3:+95156566 | None:intergenic |
| CCTGGTCATGAATACGCAAC+TGG | 0.481018 | 6_3:+95157621 | None:intergenic |
| GAAGCATTGTCGGCTCCAAT+TGG | 0.484568 | 6_3:-95157179 | Msa0966630:CDS |
| TTAGATTAGAAGTTGGGATC+TGG | 0.486486 | 6_3:+95161240 | None:intergenic |
| CCAGGTTTGCGTATCGAACA+TGG | 0.486892 | 6_3:-95156010 | Msa0966630:intron |
| CGCATCTACCGTTTCCGTGG+TGG | 0.487516 | 6_3:+95157483 | None:intergenic |
| TGGATCGTTGAAAATTGAAT+CGG | 0.490279 | 6_3:+95161197 | None:intergenic |
| GATGATGATGATGGATGTTT+GGG | 0.491544 | 6_3:+95161294 | None:intergenic |
| GGCAGCTTTGCAGGCTGAGA+TGG | 0.492052 | 6_3:-95156483 | Msa0966630:CDS |
| TTTGCAGGAACAGGGCGTGC+AGG | 0.497715 | 6_3:+95156530 | None:intergenic |
| CGAAGATTGACGAAGATTGA+AGG | 0.497976 | 6_3:+95161336 | None:intergenic |
| TGATGATGGATGTTTGGGTT+AGG | 0.515090 | 6_3:+95161299 | None:intergenic |
| GTGCAGGTTGCCTCCCAGCT+GGG | 0.526011 | 6_3:+95156546 | None:intergenic |
| GCTGCCAATTCATCTTCCTC+AGG | 0.526016 | 6_3:+95156500 | None:intergenic |
| CTGCAATTCAATGTTTGAAG+AGG | 0.528685 | 6_3:-95157685 | Msa0966630:CDS |
| ACAGCAATACCAAATATTTG+TGG | 0.530701 | 6_3:-95155822 | Msa0966630:three_prime_UTR |
| CTGCTCATTTATCTCGTCCA+TGG | 0.531919 | 6_3:+95157226 | None:intergenic |
| GCTGAGATGGCACTTTGAGC+GGG | 0.538605 | 6_3:-95156470 | Msa0966630:intron |
| TAATAGATGATAATGTTAGA+AGG | 0.546431 | 6_3:-95157514 | Msa0966630:intron |
| AATTCATCTTCCTCAGGAGT+CGG | 0.548839 | 6_3:+95156506 | None:intergenic |
| GGCTGAGATGGCACTTTGAG+CGG | 0.549673 | 6_3:-95156471 | Msa0966630:exon |
| CCACAGTGCACGTCCCAGCT+GGG | 0.553286 | 6_3:-95156559 | Msa0966630:CDS |
| AACAGGAGCAGCTACTATGA+AGG | 0.577122 | 6_3:-95157455 | Msa0966630:CDS |
| ACAAATATTTGGTATTGCTG+TGG | 0.583068 | 6_3:+95155824 | None:intergenic |
| TAACGCATCTACCGTTTCCG+TGG | 0.584559 | 6_3:+95157480 | None:intergenic |
| AGAAAAGCCGATGATGATGA+TGG | 0.585082 | 6_3:+95161285 | None:intergenic |
| CCCAGCTGGGACGTGCACTG+TGG | 0.592771 | 6_3:+95156559 | None:intergenic |
| TGGGTTAGGACAAGATTCCA+AGG | 0.594655 | 6_3:+95161313 | None:intergenic |
| GAACAACAAGTTGAGCAGCT+TGG | 0.596454 | 6_3:-95157650 | Msa0966630:CDS |
| GAGTCGGCTTTGCAGGAACA+GGG | 0.596697 | 6_3:+95156522 | None:intergenic |
| TCCTGCAAAGCCGACTCCTG+AGG | 0.597589 | 6_3:-95156516 | Msa0966630:CDS |
| CAAACATCCATCATCATCAT+CGG | 0.600624 | 6_3:-95161292 | Msa0966630:five_prime_UTR |
| TGATGACGTCGACAAGACCA+TGG | 0.612646 | 6_3:-95157243 | Msa0966630:CDS |
| CACTTTAGACAAATTAAACG+AGG | 0.618854 | 6_3:-95161071 | Msa0966630:intron |
| TCTGGCGATCTGGATTGGGT+AGG | 0.635725 | 6_3:+95161258 | None:intergenic |
| TTTGGCTATCTGATACTGTG+TGG | 0.676941 | 6_3:-95155982 | Msa0966630:three_prime_UTR |
| CAGTGCACGTCCCAGCTGGG+AGG | 0.680562 | 6_3:-95156556 | Msa0966630:CDS |
| ATGTAATAATGCGTGCCACG+TGG | 0.684759 | 6_3:-95161383 | Msa0966630:five_prime_UTR |
| GTGCTGCCTTTATTTCCACG+TGG | 0.698621 | 6_3:+95161368 | None:intergenic |
| AGAAGGTGCTAAAGCCACCA+CGG | 0.700426 | 6_3:-95157497 | Msa0966630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATGGAAAAAAAAA+AGG | + | chr6_3:95156155-95156174 | None:intergenic | 10.0% |
| !! | AACATTTAAATTTAATATGT+CGG | + | chr6_3:95156633-95156652 | None:intergenic | 10.0% |
| !! | ATTTCTATAACAAAAAATTA+AGG | - | chr6_3:95156742-95156761 | Msa0966630:intron | 10.0% |
| !!! | TTGAAGAATAATTTTATTTT+TGG | - | chr6_3:95157297-95157316 | Msa0966630:intron | 10.0% |
| !!! | TGAAGAATAATTTTATTTTT+GGG | - | chr6_3:95157298-95157317 | Msa0966630:intron | 10.0% |
| !!! | TATGAAGATAAAATTTTTGT+TGG | - | chr6_3:95156467-95156486 | Msa0966630:intron | 15.0% |
| !!! | CTCATAGATTATAATTTTAA+AGG | - | chr6_3:95156659-95156678 | Msa0966630:intron | 15.0% |
| !! | TTTCATATAAGTAAAAATCA+TGG | + | chr6_3:95156872-95156891 | None:intergenic | 15.0% |
| !! | ATAGTCATAAACAAATTAAA+TGG | + | chr6_3:95157063-95157082 | None:intergenic | 15.0% |
| !! | AAAATTATTCTTCAATTGAT+AGG | + | chr6_3:95157292-95157311 | None:intergenic | 15.0% |
| !!! | GAAGAATAATTTTATTTTTG+GGG | - | chr6_3:95157299-95157318 | Msa0966630:intron | 15.0% |
| !! | TACAAATTAACAAATTCAAT+CGG | + | chr6_3:95157539-95157558 | None:intergenic | 15.0% |
| !!! | TGTTTAAGTTATTTGTATAA+CGG | - | chr6_3:95157901-95157920 | Msa0966630:intron | 15.0% |
| !! | TTAATTTATACATAAACACT+TGG | + | chr6_3:95158087-95158106 | None:intergenic | 15.0% |
| !! | AATTAATCATTTGTTTGAAT+TGG | + | chr6_3:95158272-95158291 | None:intergenic | 15.0% |
| !! | TGAATTAAGAAAAAGTTTAA+GGG | + | chr6_3:95159078-95159097 | None:intergenic | 15.0% |
| !! | ATGATTTATTTAATTGAGTT+TGG | - | chr6_3:95159876-95159895 | Msa0966630:intron | 15.0% |
| !!! | TCATTTTCTTAAAATATGAT+TGG | + | chr6_3:95160366-95160385 | None:intergenic | 15.0% |
| !!! | ATATTGTAATTTGTAACTAA+TGG | - | chr6_3:95160962-95160981 | Msa0966630:intron | 15.0% |
| !!! | TATCAAAAGATAACTTTTTA+AGG | + | chr6_3:95161250-95161269 | None:intergenic | 15.0% |
| !! | TATTTAACTCAAAATGATTT+AGG | + | chr6_3:95161300-95161319 | None:intergenic | 15.0% |
| !!! | GAAACAAAAATATTGTTGTT+TGG | + | chr6_3:95155992-95156011 | None:intergenic | 20.0% |
| !! | ATTAATGGAAAAAAAAAAGG+TGG | + | chr6_3:95156152-95156171 | None:intergenic | 20.0% |
| !! | AACAAAACCTTATATGATAA+AGG | + | chr6_3:95156333-95156352 | None:intergenic | 20.0% |
| !!! | TTATCATATAAGGTTTTGTT+TGG | - | chr6_3:95156333-95156352 | Msa0966630:intron | 20.0% |
| !!! | AAGCTTTTATTTGTTATTCA+TGG | - | chr6_3:95156413-95156432 | Msa0966630:intron | 20.0% |
| !!! | AGCTTTTATTTGTTATTCAT+GGG | - | chr6_3:95156414-95156433 | Msa0966630:intron | 20.0% |
| !! | TTGTTATAGAAATTAAATGC+AGG | + | chr6_3:95156735-95156754 | None:intergenic | 20.0% |
| !! | ATTTAGTAAACACTCAATTA+TGG | + | chr6_3:95156982-95157001 | None:intergenic | 20.0% |
| !!! | ATTTTCCAATGTAAACTAAT+AGG | - | chr6_3:95157015-95157034 | Msa0966630:intron | 20.0% |
| !!! | AATAACCTATTAGTTTACAT+TGG | + | chr6_3:95157023-95157042 | None:intergenic | 20.0% |
| !!! | TTATATTGGTTTGATACTTA+CGG | + | chr6_3:95157137-95157156 | None:intergenic | 20.0% |
| !! | TAGCTCAATGTTTATTATTT+AGG | - | chr6_3:95157245-95157264 | Msa0966630:CDS | 20.0% |
| !! | AGCTCAATGTTTATTATTTA+GGG | - | chr6_3:95157246-95157265 | Msa0966630:CDS | 20.0% |
| !! | AACTTATGAACAATAGATAA+AGG | + | chr6_3:95157366-95157385 | None:intergenic | 20.0% |
| !! | GACTTATGAATTAACATAAA+AGG | - | chr6_3:95157426-95157445 | Msa0966630:intron | 20.0% |
| !!! | AAGTTGTTTTTATCTAAACA+GGG | + | chr6_3:95157868-95157887 | None:intergenic | 20.0% |
| !!! | TAAGTTGTTTTTATCTAAAC+AGG | + | chr6_3:95157869-95157888 | None:intergenic | 20.0% |
| !!! | GTTTAAGTTATTTGTATAAC+GGG | - | chr6_3:95157902-95157921 | Msa0966630:intron | 20.0% |
| !! | TATGACATGTTTATCATATA+AGG | - | chr6_3:95158529-95158548 | Msa0966630:intron | 20.0% |
| !!! | AATAAGTTGAAAACAACATT+TGG | - | chr6_3:95158855-95158874 | Msa0966630:intron | 20.0% |
| !! | GTGAATTAAGAAAAAGTTTA+AGG | + | chr6_3:95159079-95159098 | None:intergenic | 20.0% |
| !! | TTTCTTAATTCACACAATTA+CGG | - | chr6_3:95159086-95159105 | Msa0966630:intron | 20.0% |
| !!! | TTTAGTATTAGTTTAGACAA+TGG | - | chr6_3:95159584-95159603 | Msa0966630:intron | 20.0% |
| !!! | TAATAGATGATAATGTTAGA+AGG | - | chr6_3:95159652-95159671 | Msa0966630:intron | 20.0% |
| !! | GAATGCTTATTTATTTATGT+TGG | - | chr6_3:95160043-95160062 | Msa0966630:intron | 20.0% |
| !! | TTGATTACGTAAAAAAAATG+AGG | + | chr6_3:95160211-95160230 | None:intergenic | 20.0% |
| !!! | CTTTTCACTTAATTTTGTTT+TGG | - | chr6_3:95160256-95160275 | Msa0966630:intron | 20.0% |
| !!! | ACAACAATCTAAAATAATTC+TGG | + | chr6_3:95160858-95160877 | None:intergenic | 20.0% |
| !!! | TTTTAGATTGTTGTTCTATT+TGG | - | chr6_3:95160864-95160883 | Msa0966630:intron | 20.0% |
| !!! | AAAGATAACTTTTTAAGGTA+CGG | + | chr6_3:95161245-95161264 | None:intergenic | 20.0% |
| !!! | GAAAAATTAAGTTTTCTGAT+TGG | + | chr6_3:95161416-95161435 | None:intergenic | 20.0% |
| ! | GAAAGATTAGATTAGAAGTT+GGG | + | chr6_3:95155935-95155954 | None:intergenic | 25.0% |
| ! | AGAAAGATTAGATTAGAAGT+TGG | + | chr6_3:95155936-95155955 | None:intergenic | 25.0% |
| !!! | CAATTACTCCATTTTTTGTT+CGG | - | chr6_3:95156277-95156296 | Msa0966630:intron | 25.0% |
| ! | AAGTTTATCCGAACAAAAAA+TGG | + | chr6_3:95156288-95156307 | None:intergenic | 25.0% |
| ! | GCATAATCCTTTATCATATA+AGG | - | chr6_3:95156323-95156342 | Msa0966630:intron | 25.0% |
| ! | AAAAATAAGCCAATCAAAAC+AGG | + | chr6_3:95156374-95156393 | None:intergenic | 25.0% |
| ! | CACTCAATTATGGATAAAAT+TGG | + | chr6_3:95156972-95156991 | None:intergenic | 25.0% |
| ! | AAATACTACTACATGATTGA+TGG | + | chr6_3:95157178-95157197 | None:intergenic | 25.0% |
| ! | GATAGGTATGTATTTATATC+CGG | + | chr6_3:95157275-95157294 | None:intergenic | 25.0% |
| ! | TGTATCTTCATAAACTAACT+TGG | + | chr6_3:95157391-95157410 | None:intergenic | 25.0% |
| !! | AAAGGTAAACTGTTTTCAAA+AGG | - | chr6_3:95157444-95157463 | Msa0966630:CDS | 25.0% |
| !!! | ATAATTGGATCTGTTTTTTG+CGG | + | chr6_3:95157605-95157624 | None:intergenic | 25.0% |
| ! | TAACCTATTAAAGAGAACTA+CGG | + | chr6_3:95157737-95157756 | None:intergenic | 25.0% |
| ! | TCTCTTTAATAGGTTATGTT+TGG | - | chr6_3:95157741-95157760 | Msa0966630:intron | 25.0% |
| !! | AATAGGTTATGTTTGGAATT+TGG | - | chr6_3:95157748-95157767 | Msa0966630:intron | 25.0% |
| ! | TAAAGTCAAACTGTTTCATA+AGG | - | chr6_3:95157933-95157952 | Msa0966630:intron | 25.0% |
| ! | TTTCTATAAGCTCTTACAAA+TGG | - | chr6_3:95158020-95158039 | Msa0966630:intron | 25.0% |
| ! | GTACATAGTTTATGTGTAAA+CGG | + | chr6_3:95158116-95158135 | None:intergenic | 25.0% |
| !!! | TAATACTTCTAGGATTGTTT+GGG | + | chr6_3:95158224-95158243 | None:intergenic | 25.0% |
| !!! | TTAATACTTCTAGGATTGTT+TGG | + | chr6_3:95158225-95158244 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGATACTGTT+TGG | - | chr6_3:95158485-95158504 | Msa0966630:intron | 25.0% |
| !!! | TAAGTTTTGTGATACTGTTT+GGG | - | chr6_3:95158486-95158505 | Msa0966630:intron | 25.0% |
| !!! | TTATCATATAAGGTACTGTT+TGG | - | chr6_3:95158539-95158558 | Msa0966630:intron | 25.0% |
| !!! | TATCATATAAGGTACTGTTT+GGG | - | chr6_3:95158540-95158559 | Msa0966630:intron | 25.0% |
| !! | CTCTTGTTATAGAAATAACT+TGG | + | chr6_3:95158576-95158595 | None:intergenic | 25.0% |
| ! | ATCAATTTCTGAGCATATAT+TGG | - | chr6_3:95159140-95159159 | Msa0966630:intron | 25.0% |
| ! | AGTGTCTGTATAATTTCAAA+GGG | + | chr6_3:95159286-95159305 | None:intergenic | 25.0% |
| ! | TAGTGTCTGTATAATTTCAA+AGG | + | chr6_3:95159287-95159306 | None:intergenic | 25.0% |
| ! | ACCAAAAGAAAGAACAAAAA+GGG | - | chr6_3:95159379-95159398 | Msa0966630:intron | 25.0% |
| ! | TTCTAATTTCACTTAATCCA+TGG | - | chr6_3:95159429-95159448 | Msa0966630:intron | 25.0% |
| !!! | TAATCTTATTTTGCCTCTTA+TGG | - | chr6_3:95159617-95159636 | Msa0966630:intron | 25.0% |
| !! | GTTTGATTATTTGTACCTTT+TGG | - | chr6_3:95160079-95160098 | Msa0966630:intron | 25.0% |
| ! | TTCAGACAGATTAAGAAAAA+TGG | - | chr6_3:95160181-95160200 | Msa0966630:intron | 25.0% |
| ! | AATAAATTCAGAATGCTACA+CGG | + | chr6_3:95160491-95160510 | None:intergenic | 25.0% |
| ! | CTGAATTTATTGTTCTTTAC+AGG | - | chr6_3:95160500-95160519 | Msa0966630:intron | 25.0% |
| ! | GACATCAACATATCATTTAA+CGG | + | chr6_3:95160810-95160829 | None:intergenic | 25.0% |
| ! | ATTATTGAACTGATTGTGAT+TGG | - | chr6_3:95161035-95161054 | Msa0966630:intron | 25.0% |
| !!! | TCAAGCATATGTTGATTTAT+AGG | - | chr6_3:95161212-95161231 | Msa0966630:five_prime_UTR | 25.0% |
| ! | ATTTGTAGACCACAAATATT+TGG | + | chr6_3:95161356-95161375 | None:intergenic | 25.0% |
| TGGATCGTTGAAAATTGAAT+CGG | + | chr6_3:95155972-95155991 | None:intergenic | 30.0% | |
| ! | ATCATGTTTACGAGAGTTTT+CGG | - | chr6_3:95156036-95156055 | Msa0966630:intron | 30.0% |
| !! | CTCGTTTAATTTGTCTAAAG+TGG | + | chr6_3:95156097-95156116 | None:intergenic | 30.0% |
| CACTTTAGACAAATTAAACG+AGG | - | chr6_3:95156095-95156114 | Msa0966630:intron | 30.0% | |
| TTTGTTTGGATAAACAGCTA+AGG | - | chr6_3:95156347-95156366 | Msa0966630:intron | 30.0% | |
| TTGTTTGGATAAACAGCTAA+GGG | - | chr6_3:95156348-95156367 | Msa0966630:intron | 30.0% | |
| TTTCATAAGCTCAATCCAAA+CGG | - | chr6_3:95156539-95156558 | Msa0966630:CDS | 30.0% | |
| ! | TGGTGATTTTTGTCTTGTAT+TGG | + | chr6_3:95156852-95156871 | None:intergenic | 30.0% |
| TAAAAGTTGACGATAGCTAT+TGG | - | chr6_3:95156917-95156936 | Msa0966630:intron | 30.0% | |
| ! | TGTTTATTATTTAGGGTAGC+CGG | - | chr6_3:95157253-95157272 | Msa0966630:intron | 30.0% |
| ATGAACAATAGATAAAGGCA+GGG | + | chr6_3:95157361-95157380 | None:intergenic | 30.0% | |
| TATGAACAATAGATAAAGGC+AGG | + | chr6_3:95157362-95157381 | None:intergenic | 30.0% | |
| ! | AGATACAATTTTCGTTAGTG+AGG | - | chr6_3:95157404-95157423 | Msa0966630:intron | 30.0% |
| ! | AAGGTATCATGTAGAGTTTA+TGG | - | chr6_3:95157463-95157482 | Msa0966630:CDS | 30.0% |
| ATCATGTAGAGTTTATGGAA+AGG | - | chr6_3:95157468-95157487 | Msa0966630:CDS | 30.0% | |
| TCCAATTATTGCAATCCATT+CGG | - | chr6_3:95157616-95157635 | Msa0966630:intron | 30.0% | |
| TTTCCGTAGTTCTCTTTAAT+AGG | - | chr6_3:95157731-95157750 | Msa0966630:intron | 30.0% | |
| TTAGACGATAAGCTCAAATA+AGG | - | chr6_3:95158048-95158067 | Msa0966630:intron | 30.0% | |
| CTACTGCAATTAATACTTCT+AGG | + | chr6_3:95158234-95158253 | None:intergenic | 30.0% | |
| ATAGAAACAGGAATTAGAGT+TGG | + | chr6_3:95158333-95158352 | None:intergenic | 30.0% | |
| CATAGGTGAAATATAGAAAC+AGG | + | chr6_3:95158345-95158364 | None:intergenic | 30.0% | |
| TCTCTCAAATAGGTTCTATT+TGG | - | chr6_3:95158434-95158453 | Msa0966630:intron | 30.0% | |
| ! | AATGTGCTGGAAATAGTTTT+TGG | - | chr6_3:95158646-95158665 | Msa0966630:intron | 30.0% |
| AAGCTATCATAGAAAGCTTA+TGG | - | chr6_3:95158831-95158850 | Msa0966630:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr6_3:95158961-95158980 | Msa0966630:intron | 30.0% | |
| TCAAACAAGACAATCCAAAT+AGG | - | chr6_3:95159052-95159071 | Msa0966630:intron | 30.0% | |
| AAAAAGTTTAAGGGCCTATT+TGG | + | chr6_3:95159069-95159088 | None:intergenic | 30.0% | |
| ACGAATAGATAAACAGTTCA+AGG | + | chr6_3:95159203-95159222 | None:intergenic | 30.0% | |
| GGAAAATGTACTCCTTAAAA+AGG | - | chr6_3:95159324-95159343 | Msa0966630:intron | 30.0% | |
| !! | CTTTCTTTTGGTGTATTCTT+TGG | + | chr6_3:95159371-95159390 | None:intergenic | 30.0% |
| CACCAAAAGAAAGAACAAAA+AGG | - | chr6_3:95159378-95159397 | Msa0966630:intron | 30.0% | |
| ! | ACCCTTTTTGTTCTTTCTTT+TGG | + | chr6_3:95159383-95159402 | None:intergenic | 30.0% |
| CTACTCTGGACTTAAAATAT+AGG | + | chr6_3:95160312-95160331 | None:intergenic | 30.0% | |
| TTTGTAGATAAGTACTACTC+TGG | + | chr6_3:95160326-95160345 | None:intergenic | 30.0% | |
| ATCTACAAAACACAAATGCA+TGG | - | chr6_3:95160337-95160356 | Msa0966630:intron | 30.0% | |
| TTGAATGTAACCACATGTAT+CGG | - | chr6_3:95160391-95160410 | Msa0966630:intron | 30.0% | |
| ! | ATGTGTTCAATCTGAAATGT+TGG | - | chr6_3:95160441-95160460 | Msa0966630:intron | 30.0% |
| ! | GAATTCTGTTTCTCTTATTC+TGG | - | chr6_3:95160997-95161016 | Msa0966630:intron | 30.0% |
| ACAAATATTTGGTATTGCTG+TGG | + | chr6_3:95161345-95161364 | None:intergenic | 30.0% | |
| ACAGCAATACCAAATATTTG+TGG | - | chr6_3:95161344-95161363 | Msa0966630:five_prime_UTR | 30.0% | |
| CCAATATGAAGTAATGCTTA+TGG | + | chr6_3:95161387-95161406 | None:intergenic | 30.0% | |
| CCATAAGCATTACTTCATAT+TGG | - | chr6_3:95161384-95161403 | Msa0966630:five_prime_UTR | 30.0% | |
| !! | GATGATGATGATGGATGTTT+GGG | + | chr6_3:95155875-95155894 | None:intergenic | 35.0% |
| CAAACATCCATCATCATCAT+CGG | - | chr6_3:95155874-95155893 | Msa0966630:three_prime_UTR | 35.0% | |
| TTAGATTAGAAGTTGGGATC+TGG | + | chr6_3:95155929-95155948 | None:intergenic | 35.0% | |
| CGTTGAAAATTGAATCGGTT+TGG | + | chr6_3:95155967-95155986 | None:intergenic | 35.0% | |
| !! | TGTTATTCATGGGCTTGTTA+AGG | - | chr6_3:95156424-95156443 | Msa0966630:intron | 35.0% |
| TTCATAAGCTCAATCCAAAC+GGG | - | chr6_3:95156540-95156559 | Msa0966630:CDS | 35.0% | |
| AGCTAGCAAAAAGTTTATGC+AGG | - | chr6_3:95156581-95156600 | Msa0966630:CDS | 35.0% | |
| GCTAGCAAAAAGTTTATGCA+GGG | - | chr6_3:95156582-95156601 | Msa0966630:CDS | 35.0% | |
| CTAGCAAAAAGTTTATGCAG+GGG | - | chr6_3:95156583-95156602 | Msa0966630:CDS | 35.0% | |
| ACGATAGCTATTGGAAAAGT+TGG | - | chr6_3:95156926-95156945 | Msa0966630:intron | 35.0% | |
| ! | TTTCGACAACTGAACTTGTT+TGG | - | chr6_3:95157220-95157239 | Msa0966630:CDS | 35.0% |
| ! | TTCGACAACTGAACTTGTTT+GGG | - | chr6_3:95157221-95157240 | Msa0966630:CDS | 35.0% |
| TGAACAATAGATAAAGGCAG+GGG | + | chr6_3:95157360-95157379 | None:intergenic | 35.0% | |
| CCAATTATTGCAATCCATTC+GGG | - | chr6_3:95157617-95157636 | Msa0966630:intron | 35.0% | |
| TGCATTTAGCAGTACTCTTA+TGG | - | chr6_3:95157669-95157688 | Msa0966630:CDS | 35.0% | |
| ! | AAGGTATTCCGTAGATCTTA+TGG | - | chr6_3:95157952-95157971 | Msa0966630:intron | 35.0% |
| CCTCATTTCCATAAGATCTA+CGG | + | chr6_3:95157963-95157982 | None:intergenic | 35.0% | |
| GAGAGCTTATGAGAATAAGT+TGG | - | chr6_3:95158156-95158175 | Msa0966630:intron | 35.0% | |
| TTCCATAAGCTCTCTCAAAT+AGG | - | chr6_3:95158424-95158443 | Msa0966630:intron | 35.0% | |
| AACCTATTTGAGAGAGCTTA+TGG | + | chr6_3:95158429-95158448 | None:intergenic | 35.0% | |
| ! | TCTTGTTTGAGCTTATCTAC+TGG | + | chr6_3:95159042-95159061 | None:intergenic | 35.0% |
| ACTAGAAATGCTCGAGAAAA+AGG | - | chr6_3:95159303-95159322 | Msa0966630:intron | 35.0% | |
| AAAACTCAAGTCACATTCCA+TGG | + | chr6_3:95159449-95159468 | None:intergenic | 35.0% | |
| CTGCAATTCAATGTTTGAAG+AGG | - | chr6_3:95159481-95159500 | Msa0966630:intron | 35.0% | |
| TTCAATGTTTGAAGAGGAAG+AGG | - | chr6_3:95159487-95159506 | Msa0966630:intron | 35.0% | |
| AATACAAATGCATTCACACC+TGG | + | chr6_3:95159566-95159585 | None:intergenic | 35.0% | |
| !!! | TCTTATTTTGCCTCTTATGG+TGG | - | chr6_3:95159620-95159639 | Msa0966630:intron | 35.0% |
| !! | TTGGTTCTGTTTCTTTCTAC+AGG | - | chr6_3:95159895-95159914 | Msa0966630:intron | 35.0% |
| TTGAATCTGCTTCATGTTCT+CGG | + | chr6_3:95159967-95159986 | None:intergenic | 35.0% | |
| !!! | TGTTCTATTTGGTTTTGCCA+CGG | - | chr6_3:95160875-95160894 | Msa0966630:intron | 35.0% |
| !!! | GAACGCTTTTTTTTTCTTCC+AGG | - | chr6_3:95161138-95161157 | Msa0966630:exon | 35.0% |
| GTATCGAACATGGATTCATT+TGG | - | chr6_3:95161166-95161185 | Msa0966630:five_prime_UTR | 35.0% | |
| CGAAGATTGACGAAGATTGA+AGG | + | chr6_3:95155833-95155852 | None:intergenic | 40.0% | |
| !! | TGATGATGGATGTTTGGGTT+AGG | + | chr6_3:95155870-95155889 | None:intergenic | 40.0% |
| !! | CGATGATGATGATGGATGTT+TGG | + | chr6_3:95155876-95155895 | None:intergenic | 40.0% |
| ! | AGAAAAGCCGATGATGATGA+TGG | + | chr6_3:95155884-95155903 | None:intergenic | 40.0% |
| !! | TTGCTGGATGTGTCTTGTTT+AGG | + | chr6_3:95156066-95156085 | None:intergenic | 40.0% |
| TCATAAGCTCAATCCAAACG+GGG | - | chr6_3:95156541-95156560 | Msa0966630:CDS | 40.0% | |
| ! | TCGACAACTGAACTTGTTTG+GGG | - | chr6_3:95157222-95157241 | Msa0966630:CDS | 40.0% |
| TCATATAGAAGGGGTAGCTT+TGG | + | chr6_3:95157328-95157347 | None:intergenic | 40.0% | |
| AGCTACCCCTTCTATATGAA+AGG | - | chr6_3:95157329-95157348 | Msa0966630:intron | 40.0% | |
| CGGTTCCTTTCATATAGAAG+GGG | + | chr6_3:95157337-95157356 | None:intergenic | 40.0% | |
| GCGGTTCCTTTCATATAGAA+GGG | + | chr6_3:95157338-95157357 | None:intergenic | 40.0% | |
| TGCGGAAATCATGTGTGATT+GGG | + | chr6_3:95157587-95157606 | None:intergenic | 40.0% | |
| TTGCGGAAATCATGTGTGAT+TGG | + | chr6_3:95157588-95157607 | None:intergenic | 40.0% | |
| !! | CCCGAATGGATTGCAATAAT+TGG | + | chr6_3:95157620-95157639 | None:intergenic | 40.0% |
| CCGTAGATCTTATGGAAATG+AGG | - | chr6_3:95157960-95157979 | Msa0966630:intron | 40.0% | |
| GCGCAATTGCAAATAGTTGA+GGG | - | chr6_3:95157982-95158001 | Msa0966630:intron | 40.0% | |
| TCAAATAAGGCGATCCAAAC+AGG | - | chr6_3:95158061-95158080 | Msa0966630:intron | 40.0% | |
| ACATAAACACTTGGCCTGTT+TGG | + | chr6_3:95158078-95158097 | None:intergenic | 40.0% | |
| CATTGACAATCACAGCTCAT+AGG | + | chr6_3:95158362-95158381 | None:intergenic | 40.0% | |
| GAGCTTATGGAAACAGCTTA+TGG | + | chr6_3:95158416-95158435 | None:intergenic | 40.0% | |
| CACATTTCCATAAGCTCTCT+GGG | + | chr6_3:95158632-95158651 | None:intergenic | 40.0% | |
| AGACTGTTTGCAAGAGCTTA+TGG | + | chr6_3:95158690-95158709 | None:intergenic | 40.0% | |
| TCAATGAAGTCAATCCAAGC+AGG | - | chr6_3:95158725-95158744 | Msa0966630:intron | 40.0% | |
| ACATAAACACTTGACCTGCT+TGG | + | chr6_3:95158742-95158761 | None:intergenic | 40.0% | |
| ATGCTATCGAAGAGAGCTTA+TGG | - | chr6_3:95158937-95158956 | Msa0966630:intron | 40.0% | |
| TGCTATCGAAGAGAGCTTAT+GGG | - | chr6_3:95158938-95158957 | Msa0966630:intron | 40.0% | |
| ACAGATTGAGATTGAGAGAG+TGG | - | chr6_3:95159238-95159257 | Msa0966630:intron | 40.0% | |
| ! | TATTTTGCCTCTTATGGTGG+TGG | - | chr6_3:95159623-95159642 | Msa0966630:intron | 40.0% |
| !! | GCAGATTCAAGAAGCATTGT+CGG | - | chr6_3:95159977-95159996 | Msa0966630:intron | 40.0% |
| CAGCACTATACACAACCAAA+AGG | + | chr6_3:95160097-95160116 | None:intergenic | 40.0% | |
| AGTGCTGTACAATACTCTCT+CGG | - | chr6_3:95160110-95160129 | Msa0966630:intron | 40.0% | |
| !! | CTGAAATGTTGGTGCTACAT+TGG | - | chr6_3:95160452-95160471 | Msa0966630:intron | 40.0% |
| TTGTTCTTTACAGGACGAAC+TGG | - | chr6_3:95160509-95160528 | Msa0966630:intron | 40.0% | |
| GGAAGCAGAACTTGAAGAAT+TGG | - | chr6_3:95160530-95160549 | Msa0966630:intron | 40.0% | |
| AATTCATCTTCCTCAGGAGT+CGG | + | chr6_3:95160663-95160682 | None:intergenic | 40.0% | |
| TAACAAAGCCAGCGAAATTC+TGG | + | chr6_3:95160915-95160934 | None:intergenic | 40.0% | |
| GTGAAATACACTTATCGTCG+CGG | + | chr6_3:95160939-95160958 | None:intergenic | 40.0% | |
| TGTAACTAATGGCTGTGATG+TGG | - | chr6_3:95160973-95160992 | Msa0966630:intron | 40.0% | |
| AAAAGCAGCAAGAGTTGAAG+GGG | + | chr6_3:95161103-95161122 | None:intergenic | 40.0% | |
| GAAAAGCAGCAAGAGTTGAA+GGG | + | chr6_3:95161104-95161123 | None:intergenic | 40.0% | |
| AGAAAAGCAGCAAGAGTTGA+AGG | + | chr6_3:95161105-95161124 | None:intergenic | 40.0% | |
| TTTGGCTATCTGATACTGTG+TGG | - | chr6_3:95161184-95161203 | Msa0966630:five_prime_UTR | 40.0% | |
| ATGTAATAATGCGTGCCACG+TGG | - | chr6_3:95155783-95155802 | Msa0966630:three_prime_UTR | 45.0% | |
| ATCTTCGTCAATCTTCGCCT+TGG | - | chr6_3:95155836-95155855 | Msa0966630:three_prime_UTR | 45.0% | |
| ! | TGGGTTAGGACAAGATTCCA+AGG | + | chr6_3:95155856-95155875 | None:intergenic | 45.0% |
| !! | TAAAGTGGCAAGAGCATTGC+TGG | + | chr6_3:95156082-95156101 | None:intergenic | 45.0% |
| !!! | AGCTAAGGGCCTGTTTTGAT+TGG | - | chr6_3:95156362-95156381 | Msa0966630:intron | 45.0% |
| GGCGGTTCCTTTCATATAGA+AGG | + | chr6_3:95157339-95157358 | None:intergenic | 45.0% | |
| ACAATAGATAAAGGCAGGGG+CGG | + | chr6_3:95157357-95157376 | None:intergenic | 45.0% | |
| AATCGGTCGTGATACATTCG+CGG | + | chr6_3:95157522-95157541 | None:intergenic | 45.0% | |
| GGCGCAATTGCAAATAGTTG+AGG | - | chr6_3:95157981-95158000 | Msa0966630:intron | 45.0% | |
| AAGCTATCCCAGAGAGCTTA+TGG | - | chr6_3:95158622-95158641 | Msa0966630:intron | 45.0% | |
| GCACATTTCCATAAGCTCTC+TGG | + | chr6_3:95158633-95158652 | None:intergenic | 45.0% | |
| GAGAGCTTATGGAAATGTGC+TGG | - | chr6_3:95158633-95158652 | Msa0966630:intron | 45.0% | |
| !!! | GGCTTTTTCAACTTCTGCTG+CGG | + | chr6_3:95159350-95159369 | None:intergenic | 45.0% |
| ! | GAACAACAAGTTGAGCAGCT+TGG | - | chr6_3:95159516-95159535 | Msa0966630:intron | 45.0% |
| ACACAAACCACCACCATAAG+AGG | + | chr6_3:95159633-95159652 | None:intergenic | 45.0% | |
| ACGGTAGATGCGTTAAGAAC+AGG | - | chr6_3:95159694-95159713 | Msa0966630:intron | 45.0% | |
| AACAGGAGCAGCTACTATGA+AGG | - | chr6_3:95159711-95159730 | Msa0966630:intron | 45.0% | |
| CTGCTCATTTATCTCGTCCA+TGG | + | chr6_3:95159943-95159962 | None:intergenic | 45.0% | |
| AAATCAGCAGCAGCACCAAT+TGG | + | chr6_3:95160005-95160024 | None:intergenic | 45.0% | |
| GTGCTGTACAATACTCTCTC+GGG | - | chr6_3:95160111-95160130 | Msa0966630:intron | 45.0% | |
| !! | CAATACAGTGCCGATACATG+TGG | + | chr6_3:95160404-95160423 | None:intergenic | 45.0% |
| !! | AGAATTGGAGAGTGCTGAGT+TGG | - | chr6_3:95160545-95160564 | Msa0966630:intron | 45.0% |
| GACTCCTGAGGAAGATGAAT+TGG | - | chr6_3:95160662-95160681 | Msa0966630:intron | 45.0% | |
| AGATGAATTGGCAGCTTTGC+AGG | - | chr6_3:95160674-95160693 | Msa0966630:intron | 45.0% | |
| AGCTTAAGCCAGAATTTCGC+TGG | - | chr6_3:95160904-95160923 | Msa0966630:intron | 45.0% | |
| !! | TAAAAAAAACTAAAAATTAA+TGG | + | chr6_3:95156167-95156186 | None:intergenic | 5.0% |
| !! | TTTAAAAAAAAAATTATAGT+TGG | + | chr6_3:95156609-95156628 | None:intergenic | 5.0% |
| !! | ATTTATAGATTTATTTATAT+TGG | + | chr6_3:95157151-95157170 | None:intergenic | 5.0% |
| TGCGTGCCACGTGGAAATAA+AGG | - | chr6_3:95155792-95155811 | Msa0966630:three_prime_UTR | 50.0% | |
| ! | GTGCTGCCTTTATTTCCACG+TGG | + | chr6_3:95155801-95155820 | None:intergenic | 50.0% |
| GATCACGAAGTTGTCCCGAA+TGG | + | chr6_3:95157634-95157653 | None:intergenic | 50.0% | |
| AAGCACTCGTGAGGCTGTTT+GGG | + | chr6_3:95159016-95159035 | None:intergenic | 50.0% | |
| TAAGCACTCGTGAGGCTGTT+TGG | + | chr6_3:95159017-95159036 | None:intergenic | 50.0% | |
| TACTGGCATAAGCACTCGTG+AGG | + | chr6_3:95159025-95159044 | None:intergenic | 50.0% | |
| ! | CTTCTGCTGCGGCCTTTTTA+AGG | + | chr6_3:95159339-95159358 | None:intergenic | 50.0% |
| CCTGGTCATGAATACGCAAC+TGG | + | chr6_3:95159548-95159567 | None:intergenic | 50.0% | |
| CCAGTTGCGTATTCATGACC+AGG | - | chr6_3:95159545-95159564 | Msa0966630:intron | 50.0% | |
| !! | AGAAGGTGCTAAAGCCACCA+CGG | - | chr6_3:95159669-95159688 | Msa0966630:intron | 50.0% |
| TGCTAAAGCCACCACGGAAA+CGG | - | chr6_3:95159675-95159694 | Msa0966630:intron | 50.0% | |
| TAACGCATCTACCGTTTCCG+TGG | + | chr6_3:95159689-95159708 | None:intergenic | 50.0% | |
| ! | TGATGACGTCGACAAGACCA+TGG | - | chr6_3:95159923-95159942 | Msa0966630:intron | 50.0% |
| !! | GAAGCATTGTCGGCTCCAAT+TGG | - | chr6_3:95159987-95160006 | Msa0966630:intron | 50.0% |
| !!! | TGCTGCTGCTGATTTTGACG+AGG | - | chr6_3:95160010-95160029 | Msa0966630:intron | 50.0% |
| ATCGGCACTGTATTGCGTGT+CGG | - | chr6_3:95160409-95160428 | Msa0966630:intron | 50.0% | |
| ACTGTATTGCGTGTCGGACT+CGG | - | chr6_3:95160415-95160434 | Msa0966630:intron | 50.0% | |
| GCTGCCAATTCATCTTCCTC+AGG | + | chr6_3:95160669-95160688 | None:intergenic | 50.0% | |
| CCATGTTCGATACGCAAACC+TGG | + | chr6_3:95161159-95161178 | None:intergenic | 50.0% | |
| CCAGGTTTGCGTATCGAACA+TGG | - | chr6_3:95161156-95161175 | Msa0966630:five_prime_UTR | 50.0% | |
| ! | TCTGGCGATCTGGATTGGGT+AGG | + | chr6_3:95155911-95155930 | None:intergenic | 55.0% |
| GGGATCTGGCGATCTGGATT+GGG | + | chr6_3:95155915-95155934 | None:intergenic | 55.0% | |
| TGGGATCTGGCGATCTGGAT+TGG | + | chr6_3:95155916-95155935 | None:intergenic | 55.0% | |
| GAAGTTGGGATCTGGCGATC+TGG | + | chr6_3:95155921-95155940 | None:intergenic | 55.0% | |
| CAAACGGGGCCTTTATGCAG+CGG | - | chr6_3:95156555-95156574 | Msa0966630:CDS | 55.0% | |
| CTAGCTTCGCCGCTGCATAA+AGG | + | chr6_3:95156567-95156586 | None:intergenic | 55.0% | |
| ! | GAGTCGGCTTTGCAGGAACA+GGG | + | chr6_3:95160647-95160666 | None:intergenic | 55.0% |
| GGCTGAGATGGCACTTTGAG+CGG | - | chr6_3:95160695-95160714 | Msa0966630:intron | 55.0% | |
| GCTGAGATGGCACTTTGAGC+GGG | - | chr6_3:95160696-95160715 | Msa0966630:intron | 55.0% | |
| TGGCTTAAGCTAAGCAGCCG+TGG | + | chr6_3:95160895-95160914 | None:intergenic | 55.0% | |
| CGCTGCATAAAGGCCCCGTT+TGG | + | chr6_3:95156557-95156576 | None:intergenic | 60.0% | |
| CGCATCTACCGTTTCCGTGG+TGG | + | chr6_3:95159686-95159705 | None:intergenic | 60.0% | |
| GGAGCAGGAGCTGTAGTTGC+TGG | + | chr6_3:95160588-95160607 | None:intergenic | 60.0% | |
| TTTGCAGGAACAGGGCGTGC+AGG | + | chr6_3:95160639-95160658 | None:intergenic | 60.0% | |
| ! | GGAGTCGGCTTTGCAGGAAC+AGG | + | chr6_3:95160648-95160667 | None:intergenic | 60.0% |
| ! | TCCTGCAAAGCCGACTCCTG+AGG | - | chr6_3:95160650-95160669 | Msa0966630:intron | 60.0% |
| ! | TCCTCAGGAGTCGGCTTTGC+AGG | + | chr6_3:95160654-95160673 | None:intergenic | 60.0% |
| GGCAGCTTTGCAGGCTGAGA+TGG | - | chr6_3:95160683-95160702 | Msa0966630:intron | 60.0% | |
| CCAGCTGGGACGTGCACTGT+GGG | + | chr6_3:95160609-95160628 | None:intergenic | 65.0% | |
| CCACAGTGCACGTCCCAGCT+GGG | - | chr6_3:95160607-95160626 | Msa0966630:intron | 65.0% | |
| GTGCAGGTTGCCTCCCAGCT+GGG | + | chr6_3:95160623-95160642 | None:intergenic | 65.0% | |
| GGGACGTGCACTGTGGGAGC+AGG | + | chr6_3:95160603-95160622 | None:intergenic | 70.0% | |
| CCCACAGTGCACGTCCCAGC+TGG | - | chr6_3:95160606-95160625 | Msa0966630:intron | 70.0% | |
| CCCAGCTGGGACGTGCACTG+TGG | + | chr6_3:95160610-95160629 | None:intergenic | 70.0% | |
| CAGTGCACGTCCCAGCTGGG+AGG | - | chr6_3:95160610-95160629 | Msa0966630:intron | 70.0% | |
| CGTGCAGGTTGCCTCCCAGC+TGG | + | chr6_3:95160624-95160643 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 95155745 | 95161443 | 95155745 | ID=Msa0966630;Name=Msa0966630 |
| chr6_3 | mRNA | 95155745 | 95161443 | 95155745 | ID=Msa0966630-mRNA-1;Parent=Msa0966630;Name=Msa0966630-mRNA-1;_AED=0.16;_eAED=0.16;_QI=294|1|1|1|0.83|0.71|7|288|220 |
| chr6_3 | exon | 95155745 | 95156028 | 95155745 | ID=Msa0966630-mRNA-1:exon:17641;Parent=Msa0966630-mRNA-1 |
| chr6_3 | exon | 95156471 | 95156666 | 95156471 | ID=Msa0966630-mRNA-1:exon:17640;Parent=Msa0966630-mRNA-1 |
| chr6_3 | exon | 95157157 | 95157271 | 95157157 | ID=Msa0966630-mRNA-1:exon:17639;Parent=Msa0966630-mRNA-1 |
| chr6_3 | exon | 95157439 | 95157530 | 95157439 | ID=Msa0966630-mRNA-1:exon:17638;Parent=Msa0966630-mRNA-1 |
| chr6_3 | exon | 95157622 | 95157707 | 95157622 | ID=Msa0966630-mRNA-1:exon:17637;Parent=Msa0966630-mRNA-1 |
| chr6_3 | exon | 95157788 | 95157887 | 95157788 | ID=Msa0966630-mRNA-1:exon:17636;Parent=Msa0966630-mRNA-1 |
| chr6_3 | exon | 95161072 | 95161443 | 95161072 | ID=Msa0966630-mRNA-1:exon:17635;Parent=Msa0966630-mRNA-1 |
| chr6_3 | five_prime_UTR | 95161150 | 95161443 | 95161150 | ID=Msa0966630-mRNA-1:five_prime_utr;Parent=Msa0966630-mRNA-1 |
| chr6_3 | CDS | 95161072 | 95161149 | 95161072 | ID=Msa0966630-mRNA-1:cds;Parent=Msa0966630-mRNA-1 |
| chr6_3 | CDS | 95157788 | 95157887 | 95157788 | ID=Msa0966630-mRNA-1:cds;Parent=Msa0966630-mRNA-1 |
| chr6_3 | CDS | 95157622 | 95157707 | 95157622 | ID=Msa0966630-mRNA-1:cds;Parent=Msa0966630-mRNA-1 |
| chr6_3 | CDS | 95157439 | 95157530 | 95157439 | ID=Msa0966630-mRNA-1:cds;Parent=Msa0966630-mRNA-1 |
| chr6_3 | CDS | 95157157 | 95157271 | 95157157 | ID=Msa0966630-mRNA-1:cds;Parent=Msa0966630-mRNA-1 |
| chr6_3 | CDS | 95156475 | 95156666 | 95156475 | ID=Msa0966630-mRNA-1:cds;Parent=Msa0966630-mRNA-1 |
| chr6_3 | three_prime_UTR | 95156471 | 95156474 | 95156471 | ID=Msa0966630-mRNA-1:three_prime_utr;Parent=Msa0966630-mRNA-1 |
| chr6_3 | three_prime_UTR | 95155745 | 95156028 | 95155745 | ID=Msa0966630-mRNA-1:three_prime_utr;Parent=Msa0966630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
