Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043730 | sp|Q3ZBV1|IST1_BOVIN | 38.333 | 180 | 109 | 2 | 7 | 185 | 1 | 179 | 1.61e-30 | 121 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043730 | A0A396K2U0 | 97.853 | 326 | 7 | 0 | 1 | 326 | 1 | 326 | 0.0 | 652 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0043730 | 0.800861 | 1.181729e-48 | -8.615850e-47 |
| Msa0005270 | Msa0043730 | 0.808250 | 3.397309e-50 | -8.615850e-47 |
| Msa0008840 | Msa0043730 | 0.806613 | 7.554822e-50 | -8.615850e-47 |
| Msa0015090 | Msa0043730 | 0.801991 | 6.934568e-49 | -8.615850e-47 |
| Msa0017320 | Msa0043730 | 0.813827 | 2.101976e-51 | -8.615850e-47 |
| Msa0026870 | Msa0043730 | 0.802444 | 5.593871e-49 | -8.615850e-47 |
| Msa0027390 | Msa0043730 | 0.812351 | 4.429164e-51 | -8.615850e-47 |
| Msa0029850 | Msa0043730 | 0.807488 | 4.932097e-50 | -8.615850e-47 |
| Msa0043730 | Msa0049750 | 0.802090 | 6.615527e-49 | -8.615850e-47 |
| Msa0043730 | Msa0052860 | 0.803493 | 3.394898e-49 | -8.615850e-47 |
| Msa0043730 | Msa0059890 | 0.805356 | 1.389029e-49 | -8.615850e-47 |
| Msa0043730 | Msa0068430 | 0.811269 | 7.617562e-51 | -8.615850e-47 |
| Msa0043730 | Msa0072170 | 0.829408 | 5.235221e-55 | -8.615850e-47 |
| Msa0043730 | Msa0077180 | 0.810502 | 1.116490e-50 | -8.615850e-47 |
| Msa0043730 | Msa0077450 | 0.822750 | 2.004006e-53 | -8.615850e-47 |
| Msa0043730 | Msa0084430 | 0.828229 | 1.009682e-54 | -8.615850e-47 |
| Msa0043730 | Msa0085370 | 0.810930 | 9.020904e-51 | -8.615850e-47 |
| Msa0043730 | Msa0085720 | 0.833229 | 6.013847e-56 | -8.615850e-47 |
| Msa0043730 | Msa0090030 | 0.834980 | 2.190134e-56 | -8.615850e-47 |
| Msa0043730 | Msa0090100 | 0.852946 | 3.306296e-61 | -8.615850e-47 |
| Msa0043730 | Msa0092170 | 0.805516 | 1.285353e-49 | -8.615850e-47 |
| Msa0043730 | Msa0096030 | 0.804094 | 2.547535e-49 | -8.615850e-47 |
| Msa0043730 | Msa0096940 | -0.803138 | 4.021890e-49 | -8.615850e-47 |
| Msa0043730 | Msa0099510 | 0.808840 | 2.541133e-50 | -8.615850e-47 |
| Msa0043730 | Msa0101880 | 0.809405 | 1.923159e-50 | -8.615850e-47 |
| Msa0043730 | Msa0120340 | 0.809964 | 1.458390e-50 | -8.615850e-47 |
| Msa0043730 | Msa0120540 | 0.830375 | 3.042605e-55 | -8.615850e-47 |
| Msa0043730 | Msa0124550 | 0.835700 | 1.440424e-56 | -8.615850e-47 |
| Msa0043730 | Msa0130520 | 0.853553 | 2.214818e-61 | -8.615850e-47 |
| Msa0043730 | Msa0131450 | 0.803521 | 3.350679e-49 | -8.615850e-47 |
| Msa0043730 | Msa0137570 | 0.912317 | 2.237979e-83 | -8.615850e-47 |
| Msa0043730 | Msa0138020 | 0.807355 | 5.264369e-50 | -8.615850e-47 |
| Msa0043730 | Msa0140510 | -0.806365 | 8.523428e-50 | -8.615850e-47 |
| Msa0043730 | Msa0142500 | 0.804165 | 2.462619e-49 | -8.615850e-47 |
| Msa0043730 | Msa0145150 | 0.815934 | 7.166960e-52 | -8.615850e-47 |
| Msa0043730 | Msa0148120 | 0.805001 | 1.647906e-49 | -8.615850e-47 |
| Msa0043730 | Msa0154920 | 0.802195 | 6.295950e-49 | -8.615850e-47 |
| Msa0043730 | Msa0163780 | 0.807222 | 5.615290e-50 | -8.615850e-47 |
| Msa0043730 | Msa0165300 | 0.812772 | 3.583797e-51 | -8.615850e-47 |
| Msa0043730 | Msa0169820 | 0.827360 | 1.633339e-54 | -8.615850e-47 |
| Msa0043730 | Msa0170140 | 0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0043730 | Msa0171980 | 0.813024 | 3.156133e-51 | -8.615850e-47 |
| Msa0043730 | Msa0175050 | 0.808733 | 2.679119e-50 | -8.615850e-47 |
| Msa0043730 | Msa0176330 | 0.839097 | 1.942733e-57 | -8.615850e-47 |
| Msa0043730 | Msa0182570 | 0.930241 | 2.180277e-93 | -8.615850e-47 |
| Msa0043730 | Msa0198940 | 0.803932 | 2.753609e-49 | -8.615850e-47 |
| Msa0043730 | Msa0202930 | 0.821895 | 3.165376e-53 | -8.615850e-47 |
| Msa0043730 | Msa0208810 | 0.816424 | 5.569820e-52 | -8.615850e-47 |
| Msa0043730 | Msa0220080 | 0.826744 | 2.293310e-54 | -8.615850e-47 |
| Msa0043730 | Msa0225470 | 0.814297 | 1.655358e-51 | -8.615850e-47 |
| Msa0043730 | Msa0226180 | 0.819082 | 1.400135e-52 | -8.615850e-47 |
| Msa0043730 | Msa0229360 | 0.826743 | 2.294623e-54 | -8.615850e-47 |
| Msa0043730 | Msa0233610 | 0.806144 | 9.485115e-50 | -8.615850e-47 |
| Msa0043730 | Msa0239940 | 0.806788 | 6.939120e-50 | -8.615850e-47 |
| Msa0043730 | Msa0241740 | 0.845800 | 3.240236e-59 | -8.615850e-47 |
| Msa0043730 | Msa0251770 | 0.818513 | 1.884615e-52 | -8.615850e-47 |
| Msa0043730 | Msa0252240 | 0.808515 | 2.981660e-50 | -8.615850e-47 |
| Msa0043730 | Msa0265160 | 0.827889 | 1.219170e-54 | -8.615850e-47 |
| Msa0043730 | Msa0266210 | 0.802430 | 5.631492e-49 | -8.615850e-47 |
| Msa0043730 | Msa0268090 | 0.803015 | 4.265362e-49 | -8.615850e-47 |
| Msa0043730 | Msa0271580 | 0.801860 | 7.376967e-49 | -8.615850e-47 |
| Msa0043730 | Msa0279770 | 0.802393 | 5.731222e-49 | -8.615850e-47 |
| Msa0043730 | Msa0284450 | 0.807462 | 4.996235e-50 | -8.615850e-47 |
| Msa0043730 | Msa0287670 | 0.809189 | 2.139881e-50 | -8.615850e-47 |
| Msa0043730 | Msa0288730 | 0.801411 | 9.117864e-49 | -8.615850e-47 |
| Msa0043730 | Msa0289400 | 0.808768 | 2.633349e-50 | -8.615850e-47 |
| Msa0043730 | Msa0299520 | 0.802375 | 5.780740e-49 | -8.615850e-47 |
| Msa0043730 | Msa0303360 | 0.801425 | 9.058475e-49 | -8.615850e-47 |
| Msa0043730 | Msa0304840 | 0.830099 | 3.553084e-55 | -8.615850e-47 |
| Msa0043730 | Msa0305890 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0043730 | Msa0308200 | 0.814991 | 1.162097e-51 | -8.615850e-47 |
| Msa0043730 | Msa0308220 | 0.805384 | 1.370344e-49 | -8.615850e-47 |
| Msa0043730 | Msa0312310 | 0.801806 | 7.569203e-49 | -8.615850e-47 |
| Msa0043730 | Msa0319130 | 0.821423 | 4.070171e-53 | -8.615850e-47 |
| Msa0043730 | Msa0320430 | 0.816530 | 5.274172e-52 | -8.615850e-47 |
| Msa0043730 | Msa0329430 | 0.800274 | 1.556343e-48 | -8.615850e-47 |
| Msa0043730 | Msa0340690 | 0.832950 | 7.056860e-56 | -8.615850e-47 |
| Msa0043730 | Msa0340710 | 0.834167 | 3.504280e-56 | -8.615850e-47 |
| Msa0043730 | Msa0340810 | 0.806012 | 1.011279e-49 | -8.615850e-47 |
| Msa0043730 | Msa0341230 | 0.820153 | 7.971082e-53 | -8.615850e-47 |
| Msa0043730 | Msa0344870 | 0.833603 | 4.850392e-56 | -8.615850e-47 |
| Msa0043730 | Msa0347610 | 0.814314 | 1.640587e-51 | -8.615850e-47 |
| Msa0043730 | Msa0363170 | 0.807842 | 4.148135e-50 | -8.615850e-47 |
| Msa0043730 | Msa0365490 | 0.814348 | 1.612749e-51 | -8.615850e-47 |
| Msa0043730 | Msa0377530 | 0.841536 | 4.476470e-58 | -8.615850e-47 |
| Msa0043730 | Msa0378380 | 0.802873 | 4.562830e-49 | -8.615850e-47 |
| Msa0043730 | Msa0387050 | 0.809245 | 2.081657e-50 | -8.615850e-47 |
| Msa0043730 | Msa0388030 | -0.836079 | 1.154446e-56 | -8.615850e-47 |
| Msa0043730 | Msa0389810 | 0.831992 | 1.219027e-55 | -8.615850e-47 |
| Msa0043730 | Msa0394340 | 0.817741 | 2.817000e-52 | -8.615850e-47 |
| Msa0043730 | Msa0404700 | 0.803207 | 3.891298e-49 | -8.615850e-47 |
| Msa0043730 | Msa0426810 | 0.818786 | 1.634723e-52 | -8.615850e-47 |
| Msa0043730 | Msa0429290 | 0.802658 | 5.053200e-49 | -8.615850e-47 |
| Msa0043730 | Msa0429950 | 0.819656 | 1.035803e-52 | -8.615850e-47 |
| Msa0043730 | Msa0430870 | 0.819764 | 9.784512e-53 | -8.615850e-47 |
| Msa0043730 | Msa0430950 | 0.807677 | 4.497855e-50 | -8.615850e-47 |
| Msa0043730 | Msa0431670 | 0.806774 | 6.985906e-50 | -8.615850e-47 |
| Msa0043730 | Msa0433530 | 0.839507 | 1.520101e-57 | -8.615850e-47 |
| Msa0043730 | Msa0436190 | 0.829452 | 5.107710e-55 | -8.615850e-47 |
| Msa0043730 | Msa0439890 | 0.816973 | 4.194964e-52 | -8.615850e-47 |
| Msa0043730 | Msa0455590 | 0.803464 | 3.442563e-49 | -8.615850e-47 |
| Msa0043730 | Msa0464900 | 0.827257 | 1.729113e-54 | -8.615850e-47 |
| Msa0043730 | Msa0468130 | 0.843171 | 1.650730e-58 | -8.615850e-47 |
| Msa0043730 | Msa0468320 | 0.805080 | 1.586313e-49 | -8.615850e-47 |
| Msa0043730 | Msa0473240 | 0.817523 | 3.155508e-52 | -8.615850e-47 |
| Msa0043730 | Msa0475580 | 0.801249 | 9.843711e-49 | -8.615850e-47 |
| Msa0043730 | Msa0477260 | 0.821764 | 3.394212e-53 | -8.615850e-47 |
| Msa0043730 | Msa0479330 | 0.803974 | 2.697749e-49 | -8.615850e-47 |
| Msa0043730 | Msa0480600 | 0.806448 | 8.185310e-50 | -8.615850e-47 |
| Msa0043730 | Msa0481280 | 0.802096 | 6.595830e-49 | -8.615850e-47 |
| Msa0043730 | Msa0482180 | 0.814361 | 1.602140e-51 | -8.615850e-47 |
| Msa0043730 | Msa0489610 | 0.846408 | 2.213319e-59 | -8.615850e-47 |
| Msa0043730 | Msa0500720 | 0.812488 | 4.133618e-51 | -8.615850e-47 |
| Msa0043730 | Msa0505060 | 0.822639 | 2.127653e-53 | -8.615850e-47 |
| Msa0043730 | Msa0517490 | 0.847299 | 1.262901e-59 | -8.615850e-47 |
| Msa0043730 | Msa0519190 | 0.823154 | 1.614009e-53 | -8.615850e-47 |
| Msa0043730 | Msa0519220 | 0.800047 | 1.730681e-48 | -8.615850e-47 |
| Msa0043730 | Msa0524600 | 0.818932 | 1.514439e-52 | -8.615850e-47 |
| Msa0043730 | Msa0526890 | 0.805765 | 1.139620e-49 | -8.615850e-47 |
| Msa0043730 | Msa0527910 | 0.833371 | 5.541103e-56 | -8.615850e-47 |
| Msa0043730 | Msa0530650 | 0.802507 | 5.428429e-49 | -8.615850e-47 |
| Msa0043730 | Msa0532540 | 0.832618 | 8.528974e-56 | -8.615850e-47 |
| Msa0043730 | Msa0534410 | 0.846639 | 1.913952e-59 | -8.615850e-47 |
| Msa0043730 | Msa0537770 | 0.806874 | 6.655995e-50 | -8.615850e-47 |
| Msa0043730 | Msa0545290 | 0.824800 | 6.633378e-54 | -8.615850e-47 |
| Msa0043730 | Msa0549590 | 0.801112 | 1.050130e-48 | -8.615850e-47 |
| Msa0043730 | Msa0557950 | -0.816292 | 5.962499e-52 | -8.615850e-47 |
| Msa0043730 | Msa0573040 | 0.810151 | 1.329442e-50 | -8.615850e-47 |
| Msa0043730 | Msa0580530 | 0.816177 | 6.324864e-52 | -8.615850e-47 |
| Msa0043730 | Msa0587030 | 0.837352 | 5.466772e-57 | -8.615850e-47 |
| Msa0043730 | Msa0587190 | 0.828539 | 8.498944e-55 | -8.615850e-47 |
| Msa0043730 | Msa0588240 | 0.845618 | 3.630367e-59 | -8.615850e-47 |
| Msa0043730 | Msa0589390 | 0.836090 | 1.146822e-56 | -8.615850e-47 |
| Msa0043730 | Msa0590650 | 0.834330 | 3.190907e-56 | -8.615850e-47 |
| Msa0043730 | Msa0591710 | 0.815160 | 1.066049e-51 | -8.615850e-47 |
| Msa0043730 | Msa0597000 | 0.810117 | 1.351894e-50 | -8.615850e-47 |
| Msa0043730 | Msa0600890 | 0.828776 | 7.450142e-55 | -8.615850e-47 |
| Msa0043730 | Msa0602370 | 0.814190 | 1.747999e-51 | -8.615850e-47 |
| Msa0043730 | Msa0615220 | 0.806759 | 7.038960e-50 | -8.615850e-47 |
| Msa0043730 | Msa0619920 | 0.816962 | 4.219623e-52 | -8.615850e-47 |
| Msa0043730 | Msa0620330 | 0.821676 | 3.557365e-53 | -8.615850e-47 |
| Msa0043730 | Msa0621650 | 0.820844 | 5.534899e-53 | -8.615850e-47 |
| Msa0043730 | Msa0621790 | 0.809592 | 1.753093e-50 | -8.615850e-47 |
| Msa0043730 | Msa0626220 | 0.809262 | 2.064389e-50 | -8.615850e-47 |
| Msa0043730 | Msa0626850 | 0.838699 | 2.462636e-57 | -8.615850e-47 |
| Msa0043730 | Msa0626940 | 0.829990 | 3.778603e-55 | -8.615850e-47 |
| Msa0043730 | Msa0626990 | 0.815399 | 9.429214e-52 | -8.615850e-47 |
| Msa0043730 | Msa0627350 | 0.807792 | 4.250266e-50 | -8.615850e-47 |
| Msa0043730 | Msa0628290 | 0.836443 | 9.328043e-57 | -8.615850e-47 |
| Msa0043730 | Msa0628740 | 0.820012 | 8.587347e-53 | -8.615850e-47 |
| Msa0043730 | Msa0629650 | 0.833565 | 4.956898e-56 | -8.615850e-47 |
| Msa0043730 | Msa0630950 | 0.835999 | 1.209534e-56 | -8.615850e-47 |
| Msa0043730 | Msa0643320 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0043730 | Msa0646130 | 0.810196 | 1.299857e-50 | -8.615850e-47 |
| Msa0043730 | Msa0653320 | -0.824170 | 9.332905e-54 | -8.615850e-47 |
| Msa0043730 | Msa0654620 | 0.805206 | 1.492895e-49 | -8.615850e-47 |
| Msa0043730 | Msa0661090 | 0.804418 | 2.180995e-49 | -8.615850e-47 |
| Msa0043730 | Msa0664970 | 0.836272 | 1.031390e-56 | -8.615850e-47 |
| Msa0043730 | Msa0665080 | 0.807971 | 3.895288e-50 | -8.615850e-47 |
| Msa0043730 | Msa0666140 | 0.816868 | 4.428763e-52 | -8.615850e-47 |
| Msa0043730 | Msa0669190 | 0.804020 | 2.639960e-49 | -8.615850e-47 |
| Msa0043730 | Msa0673470 | 0.807682 | 4.485385e-50 | -8.615850e-47 |
| Msa0043730 | Msa0679550 | 0.836526 | 8.889136e-57 | -8.615850e-47 |
| Msa0043730 | Msa0679810 | 0.823832 | 1.119911e-53 | -8.615850e-47 |
| Msa0043730 | Msa0682090 | 0.806357 | 8.554746e-50 | -8.615850e-47 |
| Msa0043730 | Msa0682140 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
| Msa0043730 | Msa0683140 | 0.812401 | 4.318358e-51 | -8.615850e-47 |
| Msa0043730 | Msa0686080 | 0.812822 | 3.493916e-51 | -8.615850e-47 |
| Msa0043730 | Msa0693790 | 0.808845 | 2.535601e-50 | -8.615850e-47 |
| Msa0043730 | Msa0696420 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
| Msa0043730 | Msa0705190 | 0.812024 | 5.219572e-51 | -8.615850e-47 |
| Msa0043730 | Msa0705820 | 0.800292 | 1.543544e-48 | -8.615850e-47 |
| Msa0043730 | Msa0715110 | 0.830394 | 3.011179e-55 | -8.615850e-47 |
| Msa0043730 | Msa0715140 | 0.808202 | 3.477073e-50 | -8.615850e-47 |
| Msa0043730 | Msa0715150 | 0.831371 | 1.733398e-55 | -8.615850e-47 |
| Msa0043730 | Msa0715410 | 0.833838 | 4.236582e-56 | -8.615850e-47 |
| Msa0043730 | Msa0724560 | 0.810556 | 1.086816e-50 | -8.615850e-47 |
| Msa0043730 | Msa0726860 | 0.801917 | 7.179278e-49 | -8.615850e-47 |
| Msa0043730 | Msa0731180 | 0.827389 | 1.607556e-54 | -8.615850e-47 |
| Msa0043730 | Msa0735160 | 0.822867 | 1.882811e-53 | -8.615850e-47 |
| Msa0043730 | Msa0742150 | 0.804931 | 1.704022e-49 | -8.615850e-47 |
| Msa0043730 | Msa0748070 | 0.833959 | 3.950699e-56 | -8.615850e-47 |
| Msa0043730 | Msa0749440 | 0.817114 | 3.899743e-52 | -8.615850e-47 |
| Msa0043730 | Msa0750850 | 0.816695 | 4.843769e-52 | -8.615850e-47 |
| Msa0043730 | Msa0757050 | 0.823137 | 1.628690e-53 | -8.615850e-47 |
| Msa0043730 | Msa0761890 | 0.835252 | 1.869975e-56 | -8.615850e-47 |
| Msa0043730 | Msa0763920 | 0.801476 | 8.845717e-49 | -8.615850e-47 |
| Msa0043730 | Msa0765180 | 0.822441 | 2.365635e-53 | -8.615850e-47 |
| Msa0043730 | Msa0771580 | 0.801714 | 7.904343e-49 | -8.615850e-47 |
| Msa0043730 | Msa0792090 | 0.821755 | 3.410189e-53 | -8.615850e-47 |
| Msa0043730 | Msa0794320 | 0.804575 | 2.023058e-49 | -8.615850e-47 |
| Msa0043730 | Msa0795720 | 0.818505 | 1.893082e-52 | -8.615850e-47 |
| Msa0043730 | Msa0798030 | 0.818826 | 1.600400e-52 | -8.615850e-47 |
| Msa0043730 | Msa0803590 | 0.809243 | 2.083075e-50 | -8.615850e-47 |
| Msa0043730 | Msa0805920 | 0.812476 | 4.159443e-51 | -8.615850e-47 |
| Msa0043730 | Msa0818170 | 0.809705 | 1.657948e-50 | -8.615850e-47 |
| Msa0043730 | Msa0821800 | 0.804950 | 1.688570e-49 | -8.615850e-47 |
| Msa0043730 | Msa0823500 | 0.807505 | 4.892801e-50 | -8.615850e-47 |
| Msa0043730 | Msa0825120 | 0.808806 | 2.584301e-50 | -8.615850e-47 |
| Msa0043730 | Msa0831850 | 0.803338 | 3.655757e-49 | -8.615850e-47 |
| Msa0043730 | Msa0833460 | 0.807823 | 4.186778e-50 | -8.615850e-47 |
| Msa0043730 | Msa0842770 | 0.809181 | 2.148271e-50 | -8.615850e-47 |
| Msa0043730 | Msa0844110 | 0.801326 | 9.493632e-49 | -8.615850e-47 |
| Msa0043730 | Msa0848900 | 0.802204 | 6.269706e-49 | -8.615850e-47 |
| Msa0043730 | Msa0861470 | 0.830179 | 3.398133e-55 | -8.615850e-47 |
| Msa0043730 | Msa0861500 | 0.801656 | 8.124702e-49 | -8.615850e-47 |
| Msa0043730 | Msa0861570 | 0.832131 | 1.126194e-55 | -8.615850e-47 |
| Msa0043730 | Msa0861830 | 0.814637 | 1.392141e-51 | -8.615850e-47 |
| Msa0043730 | Msa0862500 | 0.806802 | 6.892501e-50 | -8.615850e-47 |
| Msa0043730 | Msa0866400 | 0.809408 | 1.920614e-50 | -8.615850e-47 |
| Msa0043730 | Msa0869120 | 0.825784 | 3.881643e-54 | -8.615850e-47 |
| Msa0043730 | Msa0874670 | 0.801650 | 8.145175e-49 | -8.615850e-47 |
| Msa0043730 | Msa0876360 | 0.823644 | 1.239506e-53 | -8.615850e-47 |
| Msa0043730 | Msa0879860 | 0.812715 | 3.687646e-51 | -8.615850e-47 |
| Msa0043730 | Msa0892570 | 0.805631 | 1.216305e-49 | -8.615850e-47 |
| Msa0043730 | Msa0901320 | 0.861154 | 1.252459e-63 | -8.615850e-47 |
| Msa0043730 | Msa0905380 | 0.825023 | 5.874239e-54 | -8.615850e-47 |
| Msa0043730 | Msa0908170 | 0.803671 | 3.119148e-49 | -8.615850e-47 |
| Msa0043730 | Msa0909010 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
| Msa0043730 | Msa0930820 | 0.823163 | 1.605518e-53 | -8.615850e-47 |
| Msa0043730 | Msa0933290 | 0.810557 | 1.086413e-50 | -8.615850e-47 |
| Msa0043730 | Msa0934050 | 0.801720 | 7.883289e-49 | -8.615850e-47 |
| Msa0043730 | Msa0937330 | 0.848773 | 4.950232e-60 | -8.615850e-47 |
| Msa0043730 | Msa0941540 | 0.808957 | 2.398831e-50 | -8.615850e-47 |
| Msa0043730 | Msa0945100 | 0.833195 | 6.132269e-56 | -8.615850e-47 |
| Msa0043730 | Msa0959010 | 0.811750 | 5.987960e-51 | -8.615850e-47 |
| Msa0043730 | Msa0966630 | 0.803620 | 3.195194e-49 | -8.615850e-47 |
| Msa0043730 | Msa0971020 | 0.803784 | 2.955056e-49 | -8.615850e-47 |
| Msa0043730 | Msa0974630 | 0.822347 | 2.487022e-53 | -8.615850e-47 |
| Msa0043730 | Msa0978700 | 0.819387 | 1.192877e-52 | -8.615850e-47 |
| Msa0043730 | Msa0980020 | 0.802447 | 5.587190e-49 | -8.615850e-47 |
| Msa0043730 | Msa0982270 | 0.834197 | 3.445570e-56 | -8.615850e-47 |
| Msa0043730 | Msa0992600 | 0.811673 | 6.222891e-51 | -8.615850e-47 |
| Msa0043730 | Msa0993240 | 0.816271 | 6.026926e-52 | -8.615850e-47 |
| Msa0043730 | Msa0993530 | 0.817146 | 3.836703e-52 | -8.615850e-47 |
| Msa0043730 | Msa1001080 | 0.833710 | 4.560754e-56 | -8.615850e-47 |
| Msa0043730 | Msa1005410 | 0.833253 | 5.930620e-56 | -8.615850e-47 |
| Msa0043730 | Msa1006850 | 0.831070 | 2.056275e-55 | -8.615850e-47 |
| Msa0043730 | Msa1021510 | 0.861840 | 7.731141e-64 | -8.615850e-47 |
| Msa0043730 | Msa1031820 | 0.822769 | 1.983550e-53 | -8.615850e-47 |
| Msa0043730 | Msa1036740 | 0.803125 | 4.046091e-49 | -8.615850e-47 |
| Msa0043730 | Msa1036910 | 0.824068 | 9.862100e-54 | -8.615850e-47 |
| Msa0043730 | Msa1045450 | 0.804580 | 2.018017e-49 | -8.615850e-47 |
| Msa0043730 | Msa1047720 | 0.825857 | 3.728691e-54 | -8.615850e-47 |
| Msa0043730 | Msa1048700 | 0.816762 | 4.678577e-52 | -8.615850e-47 |
| Msa0043730 | Msa1071320 | 0.828899 | 6.955417e-55 | -8.615850e-47 |
| Msa0043730 | Msa1077070 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
| Msa0043730 | Msa1077340 | 0.800881 | 1.170427e-48 | -8.615850e-47 |
| Msa0043730 | Msa1092090 | 0.808019 | 3.804862e-50 | -8.615850e-47 |
| Msa0043730 | Msa1094430 | 0.807621 | 4.621409e-50 | -8.615850e-47 |
| Msa0043730 | Msa1105500 | 0.870092 | 1.894336e-66 | -8.615850e-47 |
| Msa0043730 | Msa1115280 | 0.821058 | 4.940496e-53 | -8.615850e-47 |
| Msa0043730 | Msa1118760 | 0.803264 | 3.787606e-49 | -8.615850e-47 |
| Msa0043730 | Msa1127830 | 0.822132 | 2.789745e-53 | -8.615850e-47 |
| Msa0043730 | Msa1133570 | 0.815405 | 9.401308e-52 | -8.615850e-47 |
| Msa0043730 | Msa1135880 | 0.824256 | 8.907342e-54 | -8.615850e-47 |
| Msa0043730 | Msa1164020 | 0.827395 | 1.601852e-54 | -8.615850e-47 |
| Msa0043730 | Msa1172130 | -0.820349 | 7.190866e-53 | -8.615850e-47 |
| Msa0043730 | Msa1174310 | 0.848514 | 5.840139e-60 | -8.615850e-47 |
| Msa0043730 | Msa1176360 | 0.826086 | 3.290669e-54 | -8.615850e-47 |
| Msa0043730 | Msa1177780 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0043730 | Msa1178050 | 0.811951 | 5.413597e-51 | -8.615850e-47 |
| Msa0043730 | Msa1183770 | 0.803289 | 3.742394e-49 | -8.615850e-47 |
| Msa0043730 | Msa1198880 | 0.800570 | 1.354868e-48 | -8.615850e-47 |
| Msa0043730 | Msa1203880 | 0.804025 | 2.633463e-49 | -8.615850e-47 |
| Msa0043730 | Msa1207350 | 0.802076 | 6.660980e-49 | -8.615850e-47 |
| Msa0043730 | Msa1229610 | 0.805452 | 1.326089e-49 | -8.615850e-47 |
| Msa0043730 | Msa1229850 | 0.806056 | 9.899135e-50 | -8.615850e-47 |
| Msa0043730 | Msa1233500 | 0.816001 | 6.925814e-52 | -8.615850e-47 |
| Msa0043730 | Msa1235400 | 0.829336 | 5.449649e-55 | -8.615850e-47 |
| Msa0043730 | Msa1253810 | 0.820741 | 5.844130e-53 | -8.615850e-47 |
| Msa0043730 | Msa1258370 | 0.802085 | 6.631327e-49 | -8.615850e-47 |
| Msa0043730 | Msa1270660 | 0.806529 | 7.871551e-50 | -8.615850e-47 |
| Msa0043730 | Msa1272320 | 0.811217 | 7.816604e-51 | -8.615850e-47 |
| Msa0043730 | Msa1276190 | 0.805604 | 1.232029e-49 | -8.615850e-47 |
| Msa0043730 | Msa1276440 | 0.827750 | 1.316929e-54 | -8.615850e-47 |
| Msa0043730 | Msa1276510 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
| Msa0043730 | Msa1280620 | 0.821108 | 4.811463e-53 | -8.615850e-47 |
| Msa0043730 | Msa1286550 | 0.803453 | 3.461237e-49 | -8.615850e-47 |
| Msa0043730 | Msa1293590 | 0.809957 | 1.463690e-50 | -8.615850e-47 |
| Msa0043730 | Msa1295330 | 0.804715 | 1.891135e-49 | -8.615850e-47 |
| Msa0043730 | Msa1296300 | 0.802298 | 5.994025e-49 | -8.615850e-47 |
| Msa0043730 | Msa1305200 | 0.812924 | 3.318674e-51 | -8.615850e-47 |
| Msa0043730 | Msa1305350 | 0.817565 | 3.087098e-52 | -8.615850e-47 |
| Msa0043730 | Msa1306750 | 0.822577 | 2.199550e-53 | -8.615850e-47 |
| Msa0043730 | Msa1307550 | 0.803765 | 2.981868e-49 | -8.615850e-47 |
| Msa0043730 | Msa1307740 | 0.844638 | 6.680535e-59 | -8.615850e-47 |
| Msa0043730 | Msa1314770 | 0.851361 | 9.328620e-61 | -8.615850e-47 |
| Msa0043730 | Msa1330890 | -0.809774 | 1.602298e-50 | -8.615850e-47 |
| Msa0043730 | Msa1333420 | 0.800745 | 1.247676e-48 | -8.615850e-47 |
| Msa0043730 | Msa1335710 | 0.820691 | 5.999915e-53 | -8.615850e-47 |
| Msa0043730 | Msa1338250 | 0.808103 | 3.650255e-50 | -8.615850e-47 |
| Msa0043730 | Msa1340810 | 0.807186 | 5.716218e-50 | -8.615850e-47 |
| Msa0043730 | Msa1340830 | 0.839597 | 1.440884e-57 | -8.615850e-47 |
| Msa0043730 | Msa1344660 | 0.804996 | 1.652110e-49 | -8.615850e-47 |
| Msa0043730 | Msa1348600 | 0.828245 | 1.000548e-54 | -8.615850e-47 |
| Msa0043730 | Msa1348850 | 0.814676 | 1.364870e-51 | -8.615850e-47 |
| Msa0043730 | Msa1350690 | 0.810318 | 1.223760e-50 | -8.615850e-47 |
| Msa0043730 | Msa1355890 | 0.800333 | 1.513943e-48 | -8.615850e-47 |
| Msa0043730 | Msa1363700 | 0.855689 | 5.330470e-62 | -8.615850e-47 |
| Msa0043730 | Msa1366300 | 0.835817 | 1.345300e-56 | -8.615850e-47 |
| Msa0043730 | Msa1371090 | 0.832360 | 9.883040e-56 | -8.615850e-47 |
| Msa0043730 | Msa1371240 | 0.818415 | 1.983516e-52 | -8.615850e-47 |
| Msa0043730 | Msa1371940 | 0.820098 | 8.207420e-53 | -8.615850e-47 |
| Msa0043730 | Msa1396940 | 0.819255 | 1.278497e-52 | -8.615850e-47 |
| Msa0043730 | Msa1400070 | 0.810163 | 1.321158e-50 | -8.615850e-47 |
| Msa0043730 | Msa1404670 | 0.803896 | 2.800468e-49 | -8.615850e-47 |
| Msa0043730 | Msa1417810 | -0.811628 | 6.365787e-51 | -8.615850e-47 |
| Msa0043730 | Msa1422910 | 0.800774 | 1.230838e-48 | -8.615850e-47 |
| Msa0043730 | Msa1431060 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0043730 | Msa1431640 | 0.801500 | 8.743370e-49 | -8.615850e-47 |
| Msa0043730 | Msa1433220 | 0.846528 | 2.053058e-59 | -8.615850e-47 |
| Msa0043730 | Msa1435400 | 0.858223 | 9.547362e-63 | -8.615850e-47 |
| Msa0043730 | Msa1440940 | 0.813744 | 2.192073e-51 | -8.615850e-47 |
| Msa0043730 | Msa1444260 | 0.802856 | 4.599898e-49 | -8.615850e-47 |
| Msa0043730 | Msa1445220 | 0.814350 | 1.611409e-51 | -8.615850e-47 |
| Msa0043730 | Msa1445400 | -0.812898 | 3.363255e-51 | -8.615850e-47 |
| Msa0043730 | Msa1449350 | -0.817854 | 2.657579e-52 | -8.615850e-47 |
| Msa0043730 | Msa1452470 | 0.817383 | 3.393819e-52 | -8.615850e-47 |
| Msa0043730 | Msa1455390 | 0.803639 | 3.166488e-49 | -8.615850e-47 |
| Msa0043730 | Msa1462930 | 0.817705 | 2.871240e-52 | -8.615850e-47 |
| Msa0043730 | Msa1463600 | 0.808252 | 3.393481e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043730 | MtrunA17_Chr1g0209771 | 97.853 | 326 | 7 | 0 | 1 | 326 | 1 | 326 | 0.0 | 652 |
| Msa0043730 | MtrunA17_Chr6g0464791 | 55.128 | 234 | 105 | 0 | 1 | 234 | 1 | 234 | 1.67e-86 | 271 |
| Msa0043730 | MtrunA17_Chr8g0370931 | 53.030 | 198 | 93 | 0 | 7 | 204 | 21 | 218 | 8.73e-77 | 241 |
| Msa0043730 | MtrunA17_Chr6g0487991 | 51.269 | 197 | 96 | 0 | 7 | 203 | 1 | 197 | 4.03e-69 | 233 |
| Msa0043730 | MtrunA17_Chr4g0042021 | 32.827 | 329 | 202 | 7 | 7 | 325 | 1 | 320 | 4.55e-47 | 163 |
| Msa0043730 | MtrunA17_Chr1g0210081 | 39.779 | 181 | 108 | 1 | 4 | 183 | 5 | 185 | 2.12e-39 | 142 |
| Msa0043730 | MtrunA17_Chr2g0324121 | 40.120 | 167 | 100 | 0 | 14 | 180 | 11 | 177 | 2.04e-38 | 143 |
| Msa0043730 | MtrunA17_Chr7g0214961 | 39.024 | 164 | 100 | 0 | 13 | 176 | 8 | 171 | 3.52e-35 | 132 |
| Msa0043730 | MtrunA17_Chr2g0331801 | 32.941 | 170 | 105 | 1 | 15 | 184 | 12 | 172 | 1.88e-26 | 108 |
| Msa0043730 | MtrunA17_Chr4g0004491 | 30.531 | 226 | 144 | 6 | 13 | 238 | 13 | 225 | 1.97e-26 | 107 |
| Msa0043730 | MtrunA17_Chr8g0390551 | 28.415 | 183 | 121 | 2 | 3 | 185 | 1 | 173 | 3.91e-21 | 94.0 |
| Msa0043730 | MtrunA17_Chr6g0485461 | 28.947 | 228 | 143 | 4 | 2 | 220 | 56 | 273 | 3.43e-20 | 91.3 |
| Msa0043730 | MtrunA17_Chr7g0262101 | 27.742 | 155 | 107 | 2 | 30 | 184 | 35 | 184 | 2.96e-14 | 70.5 |
| Msa0043730 | MtrunA17_Chr7g0260911 | 29.126 | 103 | 73 | 0 | 96 | 198 | 4 | 106 | 2.82e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0043730 | AT1G25420.1 | 60.625 | 320 | 112 | 4 | 1 | 318 | 1 | 308 | 5.25e-125 | 361 |
| Msa0043730 | AT1G25420.4 | 59.386 | 293 | 105 | 4 | 28 | 318 | 1 | 281 | 4.92e-108 | 317 |
| Msa0043730 | AT1G34220.2 | 53.942 | 241 | 108 | 1 | 1 | 238 | 1 | 241 | 2.97e-87 | 274 |
| Msa0043730 | AT1G34220.1 | 47.970 | 271 | 108 | 2 | 1 | 238 | 1 | 271 | 9.31e-81 | 258 |
| Msa0043730 | AT1G25420.3 | 55.378 | 251 | 98 | 4 | 70 | 318 | 2 | 240 | 1.77e-79 | 243 |
| Msa0043730 | AT1G25420.2 | 55.378 | 251 | 98 | 4 | 70 | 318 | 2 | 240 | 1.77e-79 | 243 |
| Msa0043730 | AT4G35730.1 | 51.942 | 206 | 99 | 0 | 7 | 212 | 21 | 226 | 2.43e-76 | 241 |
| Msa0043730 | AT4G29440.1 | 45.604 | 182 | 99 | 0 | 4 | 185 | 1 | 182 | 1.94e-58 | 203 |
| Msa0043730 | AT2G19710.1 | 35.028 | 354 | 166 | 5 | 4 | 312 | 1 | 335 | 2.81e-58 | 202 |
| Msa0043730 | AT4G29440.2 | 48.366 | 153 | 79 | 0 | 33 | 185 | 2 | 154 | 7.58e-51 | 181 |
| Msa0043730 | AT1G13340.1 | 31.959 | 194 | 130 | 1 | 4 | 195 | 5 | 198 | 1.62e-32 | 125 |
| Msa0043730 | AT1G79910.1 | 31.694 | 183 | 115 | 2 | 3 | 185 | 1 | 173 | 2.17e-28 | 113 |
| Msa0043730 | AT2G14830.1 | 32.738 | 168 | 113 | 0 | 14 | 181 | 11 | 178 | 9.57e-28 | 111 |
| Msa0043730 | AT1G52315.1 | 28.571 | 175 | 115 | 3 | 13 | 186 | 10 | 175 | 5.22e-23 | 98.2 |
| Msa0043730 | AT1G79910.3 | 35.714 | 126 | 72 | 1 | 60 | 185 | 2 | 118 | 1.77e-22 | 96.3 |
| Msa0043730 | AT1G79910.2 | 36.585 | 123 | 69 | 1 | 63 | 185 | 46 | 159 | 4.13e-22 | 95.9 |
| Msa0043730 | AT4G32350.1 | 26.776 | 183 | 124 | 2 | 3 | 185 | 1 | 173 | 2.45e-20 | 92.4 |
| Msa0043730 | AT4G32350.3 | 26.776 | 183 | 124 | 2 | 3 | 185 | 1 | 173 | 2.45e-20 | 92.4 |
| Msa0043730 | AT1G52315.2 | 30.769 | 117 | 71 | 3 | 71 | 186 | 18 | 125 | 3.40e-16 | 78.2 |
| Msa0043730 | AT1G51900.1 | 32.278 | 158 | 100 | 3 | 26 | 178 | 25 | 180 | 5.17e-14 | 73.2 |
| Msa0043730 | AT3G15490.1 | 28.788 | 132 | 91 | 1 | 39 | 167 | 2 | 133 | 2.56e-13 | 68.6 |
Find 69 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATATCGTTTGAACAATT+TGG | 0.136117 | 1_1:-75126337 | Msa0043730:three_prime_UTR |
| AACTTGTTTACTACTAAATA+TGG | 0.150771 | 1_1:-75128379 | Msa0043730:CDS |
| ATGGGCTGCATATGAAATTT+TGG | 0.213582 | 1_1:-75130405 | Msa0043730:CDS |
| CTAAAACTGCAGCAGAATTT+AGG | 0.215309 | 1_1:-75128081 | Msa0043730:CDS |
| TACTTCTGACTCTCAATTAT+AGG | 0.241660 | 1_1:+75130350 | None:intergenic |
| TTCTTTCTAACAATAATTCT+TGG | 0.251948 | 1_1:-75126741 | Msa0043730:CDS |
| ATTTCAATCCTCTGATATAT+TGG | 0.254871 | 1_1:-75126644 | Msa0043730:CDS |
| TCATTCGAGAACAAAATATA+TGG | 0.266370 | 1_1:-75130424 | Msa0043730:CDS |
| AGAGTTGATCTTAACTTTGT+AGG | 0.321245 | 1_1:+75126195 | None:intergenic |
| TCTGAACTTCGTCCTGATTC+AGG | 0.335446 | 1_1:-75128334 | Msa0043730:CDS |
| TTATATCGTTTGAACAATTT+GGG | 0.336633 | 1_1:-75126336 | Msa0043730:three_prime_UTR |
| AAGAACCAATTGCTAGAATT+CGG | 0.357696 | 1_1:-75130544 | Msa0043730:CDS |
| GAATAAGATTAATAGTAATA+AGG | 0.375288 | 1_1:+75125919 | None:intergenic |
| CAACGGAACTTTGATGTGCT+TGG | 0.386027 | 1_1:-75126278 | Msa0043730:three_prime_UTR |
| CGTTGTGTTCACCCCATGTC+AGG | 0.397155 | 1_1:+75126296 | None:intergenic |
| GTGCGATTCACGCCTGAATC+AGG | 0.402265 | 1_1:+75128322 | None:intergenic |
| ATTACCCGAATTCTAGCAAT+TGG | 0.402690 | 1_1:+75130539 | None:intergenic |
| CTAAATCGATGAACTTTGCT+TGG | 0.419542 | 1_1:-75126501 | Msa0043730:three_prime_UTR |
| CTTTCAGTTAGTGCTCCATC+TGG | 0.420640 | 1_1:-75128166 | Msa0043730:CDS |
| TCACTTGCACATAGTGACTT+TGG | 0.422099 | 1_1:-75126559 | Msa0043730:CDS |
| AGAACCAATTGCTAGAATTC+GGG | 0.432063 | 1_1:-75130543 | Msa0043730:intron |
| TAGAAAGAATAGAAGCTTCA+AGG | 0.433370 | 1_1:+75126755 | None:intergenic |
| ACTTGTTTACTACTAAATAT+GGG | 0.437025 | 1_1:-75128378 | Msa0043730:CDS |
| TTCTTGATGTGCAATAAGTC+TGG | 0.476632 | 1_1:+75128400 | None:intergenic |
| TTTGCTTGGTATCTCAAGGT+TGG | 0.477044 | 1_1:-75126487 | Msa0043730:three_prime_UTR |
| GTTCTCTCTGTTGGTAGCAA+TGG | 0.478564 | 1_1:-75126221 | Msa0043730:three_prime_UTR |
| CATTCGAGAACAAAATATAT+GGG | 0.494027 | 1_1:-75130423 | Msa0043730:CDS |
| AGCGTGGTGATTTAGTTTCG+TGG | 0.500125 | 1_1:-75130926 | Msa0043730:five_prime_UTR |
| TAAAGCCAGGTTCTCTCTGT+TGG | 0.510738 | 1_1:-75126230 | Msa0043730:three_prime_UTR |
| GATAAAACTCAAGGTCTTGA+CGG | 0.511590 | 1_1:-75128140 | Msa0043730:CDS |
| TGCACGATTTGCAGAAGCTA+TGG | 0.518629 | 1_1:+75126606 | None:intergenic |
| TGACTTTGGATCATTGAAGC+TGG | 0.520410 | 1_1:-75126545 | Msa0043730:CDS |
| GAACTTTGCTTGGTATCTCA+AGG | 0.520612 | 1_1:-75126491 | Msa0043730:three_prime_UTR |
| AAGCAACAAAAGTTAAAGCC+AGG | 0.533538 | 1_1:-75126243 | Msa0043730:three_prime_UTR |
| CAGAAGAATACAATCTAGCA+TGG | 0.533676 | 1_1:-75128111 | Msa0043730:CDS |
| TGCTACCAACAGAGAGAACC+TGG | 0.537214 | 1_1:+75126225 | None:intergenic |
| TGCGTGAAATTGCGAGGTTG+AGG | 0.541893 | 1_1:+75130645 | None:intergenic |
| TAAGGTTACTTAATCTTCAA+CGG | 0.542740 | 1_1:+75125937 | None:intergenic |
| ATGGCTTCTCGCAATTCCGA+CGG | 0.549527 | 1_1:+75128463 | None:intergenic |
| CTTAATCAACTCTTTAGCAG+AGG | 0.562495 | 1_1:-75130865 | Msa0043730:CDS |
| GTTGATCTTAACTTTGTAGG+TGG | 0.564479 | 1_1:+75126198 | None:intergenic |
| ATCCTCTGATATATTGGAGA+AGG | 0.565767 | 1_1:-75126638 | Msa0043730:CDS |
| AAGTTAAATAATATGACTGA+TGG | 0.570771 | 1_1:+75126053 | None:intergenic |
| CACCTTGTAAATCCTGACAT+GGG | 0.578194 | 1_1:-75126308 | Msa0043730:three_prime_UTR |
| ACCCCATGTCAGGATTTACA+AGG | 0.582262 | 1_1:+75126306 | None:intergenic |
| ATCTGGAGAGATAAAACTCA+AGG | 0.587410 | 1_1:-75128149 | Msa0043730:CDS |
| ACAAAGTTAAGATCAACTCT+AGG | 0.588749 | 1_1:-75126192 | Msa0043730:three_prime_UTR |
| TGGCTTCTCGCAATTCCGAC+GGG | 0.590920 | 1_1:+75128464 | None:intergenic |
| TTTGGATCATTGAAGCTGGA+AGG | 0.592273 | 1_1:-75126541 | Msa0043730:CDS |
| GTACAGTAAATACCGCAGTA+AGG | 0.599724 | 1_1:+75126451 | None:intergenic |
| GGAGCAAAGCAAGTTGGTGT+CGG | 0.600016 | 1_1:-75126883 | Msa0043730:CDS |
| GCACCTTGTAAATCCTGACA+TGG | 0.600463 | 1_1:-75126309 | Msa0043730:three_prime_UTR |
| CAGGGTGGAGCAAAGCAAGT+TGG | 0.607429 | 1_1:-75126889 | Msa0043730:CDS |
| CAATTATAGGTACACGTGCA+AGG | 0.612342 | 1_1:+75130363 | None:intergenic |
| CATACTGAATCGATTTAGCA+AGG | 0.613662 | 1_1:+75126138 | None:intergenic |
| ACGATTTGCAGAAGCTATGG+CGG | 0.619875 | 1_1:+75126609 | None:intergenic |
| ATATGACTGATGGTAAAACA+TGG | 0.625788 | 1_1:+75126063 | None:intergenic |
| TCTTGCATTGAGCCCATCGT+AGG | 0.629156 | 1_1:+75126101 | None:intergenic |
| AGCCTTCTCCAATATATCAG+AGG | 0.634844 | 1_1:+75126636 | None:intergenic |
| ACTTCATGCGTGAAATTGCG+AGG | 0.641498 | 1_1:+75130639 | None:intergenic |
| AGAAGAATACAATCTAGCAT+GGG | 0.650670 | 1_1:-75128110 | Msa0043730:CDS |
| TCAACTCAAACAAATGCGGA+AGG | 0.653130 | 1_1:-75130594 | Msa0043730:CDS |
| ACATAATAGGGAATGCCCGT+CGG | 0.666817 | 1_1:-75128479 | Msa0043730:intron |
| ACCTTGTAAATCCTGACATG+GGG | 0.668070 | 1_1:-75126307 | Msa0043730:three_prime_UTR |
| TGATCTGAGGAAGCAAAGCG+TGG | 0.683836 | 1_1:-75130942 | Msa0043730:five_prime_UTR |
| CTGACATGGGGTGAACACAA+CGG | 0.685230 | 1_1:-75126295 | Msa0043730:three_prime_UTR |
| ATGTTCAACTCAAACAAATG+CGG | 0.693836 | 1_1:-75130598 | Msa0043730:CDS |
| TCTGGTATATCAGAACACCT+AGG | 0.708437 | 1_1:+75128418 | None:intergenic |
| ACATTGTTAAGACCTTACTG+CGG | 0.792534 | 1_1:-75126463 | Msa0043730:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTAACAAAATAAAATTTTA+AGG | + | chr1_1:75128038-75128057 | None:intergenic | 10.0% |
| !! | TAATATCAAAAAATATATAC+TGG | + | chr1_1:75128689-75128708 | None:intergenic | 10.0% |
| !! | AATAACAATAATAAATGAAA+TGG | + | chr1_1:75129761-75129780 | None:intergenic | 10.0% |
| !! | TAATTAAGAAACATGTAATT+GGG | + | chr1_1:75126166-75126185 | None:intergenic | 15.0% |
| !! | TTAATTAAGAAACATGTAAT+TGG | + | chr1_1:75126167-75126186 | None:intergenic | 15.0% |
| !! | ATTAAAACAAAATCTAATGA+TGG | + | chr1_1:75126194-75126213 | None:intergenic | 15.0% |
| !!! | TTAATGTTTCTGAATTTAAA+TGG | - | chr1_1:75126843-75126862 | Msa0043730:CDS | 15.0% |
| !!! | AATAAGTTTTTTATCTAAAC+AGG | + | chr1_1:75127075-75127094 | None:intergenic | 15.0% |
| !!! | CAAAATAAAATTTTAAGGTT+TGG | + | chr1_1:75128033-75128052 | None:intergenic | 15.0% |
| !!! | ATGTGCATTTATTTTTATAA+TGG | - | chr1_1:75130537-75130556 | Msa0043730:intron | 15.0% |
| !! | GAATAAGATTAATAGTAATA+AGG | + | chr1_1:75130980-75130999 | None:intergenic | 15.0% |
| !! | TTAAATGGTGTAAAACATTA+AGG | - | chr1_1:75126858-75126877 | Msa0043730:CDS | 20.0% |
| !! | TTGATTTAGATAAAATCTTG+AGG | - | chr1_1:75126908-75126927 | Msa0043730:intron | 20.0% |
| !! | TGATTTAGATAAAATCTTGA+GGG | - | chr1_1:75126909-75126928 | Msa0043730:intron | 20.0% |
| !!! | TACAAGTTTGATCTTTTAAA+TGG | - | chr1_1:75127026-75127045 | Msa0043730:intron | 20.0% |
| !! | TAAGTTTCATGAAATTGTTT+GGG | + | chr1_1:75127285-75127304 | None:intergenic | 20.0% |
| !! | ATAAGTTTCATGAAATTGTT+TGG | + | chr1_1:75127286-75127305 | None:intergenic | 20.0% |
| !! | TTATTCTTATATGTATGTGT+AGG | + | chr1_1:75127483-75127502 | None:intergenic | 20.0% |
| !!! | TAACTTATTTTAATGTTGTG+AGG | + | chr1_1:75127531-75127550 | None:intergenic | 20.0% |
| !! | TAAAACACAAACTACTTTAT+CGG | + | chr1_1:75128084-75128103 | None:intergenic | 20.0% |
| !!! | TGTTTGAAATGATTTTCAAA+AGG | - | chr1_1:75128175-75128194 | Msa0043730:CDS | 20.0% |
| !!! | TTTTTCACTTATTTCAAACT+TGG | - | chr1_1:75128237-75128256 | Msa0043730:intron | 20.0% |
| !!! | TTTTCACTTATTTCAAACTT+GGG | - | chr1_1:75128238-75128257 | Msa0043730:intron | 20.0% |
| !!! | GGACGTATTTATAATTTTAT+AGG | - | chr1_1:75128259-75128278 | Msa0043730:intron | 20.0% |
| !!! | TATAATTTTATAGGATGCTA+CGG | - | chr1_1:75128268-75128287 | Msa0043730:intron | 20.0% |
| !!! | TACTTATTGAGTTTTTAAAC+AGG | - | chr1_1:75128326-75128345 | Msa0043730:CDS | 20.0% |
| !!! | AACTTGTTTACTACTAAATA+TGG | - | chr1_1:75128517-75128536 | Msa0043730:intron | 20.0% |
| !! | ACTTGTTTACTACTAAATAT+GGG | - | chr1_1:75128518-75128537 | Msa0043730:intron | 20.0% |
| !! | ATGAAATTTGCAATAATATC+AGG | + | chr1_1:75129038-75129057 | None:intergenic | 20.0% |
| !!! | TTTTTACTTAGAATTTGAGT+TGG | - | chr1_1:75129362-75129381 | Msa0043730:intron | 20.0% |
| !!! | TTTTACTTAGAATTTGAGTT+GGG | - | chr1_1:75129363-75129382 | Msa0043730:intron | 20.0% |
| !! | TTCTTTCTAACAATAATTCT+TGG | - | chr1_1:75130155-75130174 | Msa0043730:intron | 20.0% |
| !! | TTATATCGTTTGAACAATTT+GGG | - | chr1_1:75130560-75130579 | Msa0043730:CDS | 20.0% |
| !! | AAGTTAAATAATATGACTGA+TGG | + | chr1_1:75130846-75130865 | None:intergenic | 20.0% |
| ! | TTTGTAACAAAGAAGAAATC+GGG | + | chr1_1:75126109-75126128 | None:intergenic | 25.0% |
| ! | CTTTGTAACAAAGAAGAAAT+CGG | + | chr1_1:75126110-75126129 | None:intergenic | 25.0% |
| ! | GTTACAAAGCTTCAAATTAT+TGG | - | chr1_1:75126121-75126140 | Msa0043730:three_prime_UTR | 25.0% |
| !!! | TGAATTGCGTTGTTTTAATT+AGG | - | chr1_1:75126440-75126459 | Msa0043730:three_prime_UTR | 25.0% |
| ! | TCATTCGAGAACAAAATATA+TGG | - | chr1_1:75126472-75126491 | Msa0043730:three_prime_UTR | 25.0% |
| ! | CATTCGAGAACAAAATATAT+GGG | - | chr1_1:75126473-75126492 | Msa0043730:three_prime_UTR | 25.0% |
| ! | TCTTAAATGTCTGTTCTTAT+TGG | - | chr1_1:75126579-75126598 | Msa0043730:CDS | 25.0% |
| ! | AGTTTGAACTGAAAATAAAG+AGG | + | chr1_1:75126768-75126787 | None:intergenic | 25.0% |
| !!! | ATTATTTCTGAATCTTCATG+AGG | - | chr1_1:75126805-75126824 | Msa0043730:CDS | 25.0% |
| !!! | TTATTTCTGAATCTTCATGA+GGG | - | chr1_1:75126806-75126825 | Msa0043730:CDS | 25.0% |
| ! | AATTTATGTGTTCTTGAGTA+TGG | - | chr1_1:75126943-75126962 | Msa0043730:intron | 25.0% |
| !! | GAAAAAAAGTATGAAACAGA+AGG | - | chr1_1:75126997-75127016 | Msa0043730:intron | 25.0% |
| !! | TTGATCTTTTAAATGGACAT+AGG | - | chr1_1:75127033-75127052 | Msa0043730:intron | 25.0% |
| !!! | ATAAGCTATTTCTATAGCAA+AGG | - | chr1_1:75127132-75127151 | Msa0043730:intron | 25.0% |
| ! | GCTGAAAAAATTTCAATGAA+TGG | + | chr1_1:75128215-75128234 | None:intergenic | 25.0% |
| ! | AGCAAAAATTATACTTGCAA+TGG | + | chr1_1:75128455-75128474 | None:intergenic | 25.0% |
| !!! | TTTTTCTTAGAATTTGGGTT+TGG | - | chr1_1:75129169-75129188 | Msa0043730:intron | 25.0% |
| !!! | TTTTCTTAGAATTTGGGTTT+GGG | - | chr1_1:75129170-75129189 | Msa0043730:intron | 25.0% |
| !!! | ATTTACAAGCCAGTTTTATA+GGG | + | chr1_1:75129208-75129227 | None:intergenic | 25.0% |
| !!! | AATTTACAAGCCAGTTTTAT+AGG | + | chr1_1:75129209-75129228 | None:intergenic | 25.0% |
| !!! | TATAAAACTGGCTTGTAAAT+TGG | - | chr1_1:75129208-75129227 | Msa0043730:intron | 25.0% |
| ! | AAAAACCAATGAGTTAAGTT+AGG | + | chr1_1:75129596-75129615 | None:intergenic | 25.0% |
| ! | ACAAGGAACATGATATTAAA+TGG | + | chr1_1:75129665-75129684 | None:intergenic | 25.0% |
| ! | CATAATCATGTTGTATGAAA+AGG | + | chr1_1:75129726-75129745 | None:intergenic | 25.0% |
| ! | ATTACAAGCTGAAAAACTAT+TGG | + | chr1_1:75130074-75130093 | None:intergenic | 25.0% |
| !!! | TAGTTTTTCAGCTTGTAATA+CGG | - | chr1_1:75130075-75130094 | Msa0043730:intron | 25.0% |
| !!! | CAGTTTTAGTATCATTGAAT+TGG | + | chr1_1:75130225-75130244 | None:intergenic | 25.0% |
| ! | ATTTCAATCCTCTGATATAT+TGG | - | chr1_1:75130252-75130271 | Msa0043730:intron | 25.0% |
| ! | GTTATATCGTTTGAACAATT+TGG | - | chr1_1:75130559-75130578 | Msa0043730:CDS | 25.0% |
| ! | TAAGGTTACTTAATCTTCAA+CGG | + | chr1_1:75130962-75130981 | None:intergenic | 25.0% |
| GTGTGTCTAAGAAAAAAAGA+AGG | - | chr1_1:75125931-75125950 | Msa0043730:three_prime_UTR | 30.0% | |
| GAAATCGGGTAATTAAGATT+AGG | + | chr1_1:75126095-75126114 | None:intergenic | 30.0% | |
| ATGTTCAACTCAAACAAATG+CGG | - | chr1_1:75126298-75126317 | Msa0043730:three_prime_UTR | 30.0% | |
| AAGAACCAATTGCTAGAATT+CGG | - | chr1_1:75126352-75126371 | Msa0043730:three_prime_UTR | 30.0% | |
| CAATTCACCAAAAGATTTGA+AGG | + | chr1_1:75126383-75126402 | None:intergenic | 30.0% | |
| !!! | ATTGCGTTGTTTTAATTAGG+TGG | - | chr1_1:75126443-75126462 | Msa0043730:three_prime_UTR | 30.0% |
| TACTTCTGACTCTCAATTAT+AGG | + | chr1_1:75126549-75126568 | None:intergenic | 30.0% | |
| CTATACAAATCAGTACAGAA+TGG | - | chr1_1:75126735-75126754 | Msa0043730:CDS | 30.0% | |
| !!! | TCACTTTTTAGCACATCAAA+TGG | + | chr1_1:75126970-75126989 | None:intergenic | 30.0% |
| ATTTGATGTGCTAAAAAGTG+AGG | - | chr1_1:75126969-75126988 | Msa0043730:intron | 30.0% | |
| ACATAGGCAGAATAGATTTA+GGG | - | chr1_1:75127049-75127068 | Msa0043730:intron | 30.0% | |
| ! | GCTTATTTGAGTTTATCTAG+CGG | + | chr1_1:75127310-75127329 | None:intergenic | 30.0% |
| ACTCATAAGATTCTACCATT+GGG | - | chr1_1:75127433-75127452 | Msa0043730:intron | 30.0% | |
| ATAATTACAAGTTTGCCCAA+TGG | + | chr1_1:75127451-75127470 | None:intergenic | 30.0% | |
| !! | GTTATTTTGTTCATCTGTGA+TGG | + | chr1_1:75127509-75127528 | None:intergenic | 30.0% |
| GTTATGAACATCTTGAATGA+TGG | + | chr1_1:75127569-75127588 | None:intergenic | 30.0% | |
| ! | AGATCAGATTATGTCTTTTG+AGG | + | chr1_1:75127618-75127637 | None:intergenic | 30.0% |
| !!! | AATTTTAAGGTTTGGTCCTA+CGG | + | chr1_1:75128025-75128044 | None:intergenic | 30.0% |
| CCTTCATTCTCTACATAATA+GGG | - | chr1_1:75128405-75128424 | Msa0043730:CDS | 30.0% | |
| CTGTGAGTTATCTTTAGTTA+TGG | - | chr1_1:75128596-75128615 | Msa0043730:intron | 30.0% | |
| AGAAGAATACAATCTAGCAT+GGG | - | chr1_1:75128786-75128805 | Msa0043730:intron | 30.0% | |
| GAAAAATCATGAAGATCTAC+TGG | - | chr1_1:75128837-75128856 | Msa0043730:intron | 30.0% | |
| ! | AATTTTATGTCCAACAGTGA+AGG | + | chr1_1:75128895-75128914 | None:intergenic | 30.0% |
| GATAGATGCAAGATATCATA+AGG | + | chr1_1:75128936-75128955 | None:intergenic | 30.0% | |
| CATCTATCATCAATTGTAGT+TGG | - | chr1_1:75128948-75128967 | Msa0043730:intron | 30.0% | |
| AAATTTCCTCTTATATCTGC+AGG | - | chr1_1:75129144-75129163 | Msa0043730:intron | 30.0% | |
| AATTTCCTCTTATATCTGCA+GGG | - | chr1_1:75129145-75129164 | Msa0043730:intron | 30.0% | |
| !! | AGGGCTTTTTCTTAGAATTT+GGG | - | chr1_1:75129164-75129183 | Msa0043730:intron | 30.0% |
| !! | TTTACAAGCCAGTTTTATAG+GGG | + | chr1_1:75129207-75129226 | None:intergenic | 30.0% |
| TATGAAAACGTGGTTATAAG+TGG | + | chr1_1:75129244-75129263 | None:intergenic | 30.0% | |
| AAATATCCTTGTATATCTGC+AGG | - | chr1_1:75129337-75129356 | Msa0043730:intron | 30.0% | |
| !!! | CATACAAGCTAGTTTTATAG+GGG | + | chr1_1:75129400-75129419 | None:intergenic | 30.0% |
| !!! | CCATACAAGCTAGTTTTATA+GGG | + | chr1_1:75129401-75129420 | None:intergenic | 30.0% |
| !!! | ACCATACAAGCTAGTTTTAT+AGG | + | chr1_1:75129402-75129421 | None:intergenic | 30.0% |
| AAGAAACACATTAAGATGCA+TGG | + | chr1_1:75129629-75129648 | None:intergenic | 30.0% | |
| ! | AAGCTACATTCTAGAAAACA+AGG | + | chr1_1:75129682-75129701 | None:intergenic | 30.0% |
| CAAACTACAGTGAAGTATAT+TGG | + | chr1_1:75129910-75129929 | None:intergenic | 30.0% | |
| TACTTCTCAACTGTAGTATA+AGG | - | chr1_1:75129935-75129954 | Msa0043730:intron | 30.0% | |
| ! | ATTTTCTCATATTACCTGCA+GGG | - | chr1_1:75129989-75130008 | Msa0043730:intron | 30.0% |
| !!! | CTATTGGAATTGTTTTTGCT+GGG | + | chr1_1:75130058-75130077 | None:intergenic | 30.0% |
| !!! | ACTATTGGAATTGTTTTTGC+TGG | + | chr1_1:75130059-75130078 | None:intergenic | 30.0% |
| TAGAAAGAATAGAAGCTTCA+AGG | + | chr1_1:75130144-75130163 | None:intergenic | 30.0% | |
| ! | AGAGTTGATCTTAACTTTGT+AGG | + | chr1_1:75130704-75130723 | None:intergenic | 30.0% |
| ACAAAGTTAAGATCAACTCT+AGG | - | chr1_1:75130704-75130723 | Msa0043730:intron | 30.0% | |
| ATATGACTGATGGTAAAACA+TGG | + | chr1_1:75130836-75130855 | None:intergenic | 30.0% | |
| GAAAAAAAGAAGGTGATCTG+AGG | - | chr1_1:75125941-75125960 | Msa0043730:three_prime_UTR | 35.0% | |
| CTTAATCAACTCTTTAGCAG+AGG | - | chr1_1:75126031-75126050 | Msa0043730:three_prime_UTR | 35.0% | |
| AGAACCAATTGCTAGAATTC+GGG | - | chr1_1:75126353-75126372 | Msa0043730:three_prime_UTR | 35.0% | |
| ATTACCCGAATTCTAGCAAT+TGG | + | chr1_1:75126360-75126379 | None:intergenic | 35.0% | |
| ! | GGGTAATCCTTCAAATCTTT+TGG | - | chr1_1:75126373-75126392 | Msa0043730:three_prime_UTR | 35.0% |
| ! | CATATAGTCAGTAAAAGTGC+AGG | + | chr1_1:75126416-75126435 | None:intergenic | 35.0% |
| !! | ATGGGCTGCATATGAAATTT+TGG | - | chr1_1:75126491-75126510 | Msa0043730:three_prime_UTR | 35.0% |
| GAACAGACATTTAAGAGCTA+TGG | + | chr1_1:75126575-75126594 | None:intergenic | 35.0% | |
| GACATAGGCAGAATAGATTT+AGG | - | chr1_1:75127048-75127067 | Msa0043730:intron | 35.0% | |
| GACTCATAAGATTCTACCAT+TGG | - | chr1_1:75127432-75127451 | Msa0043730:intron | 35.0% | |
| GTTACTTACGAACTTAGTCT+TGG | + | chr1_1:75127594-75127613 | None:intergenic | 35.0% | |
| ATGGTAGGATTGTTTCATGT+TGG | + | chr1_1:75127874-75127893 | None:intergenic | 35.0% | |
| CATATATTCAATGTTGCAGC+TGG | + | chr1_1:75128154-75128173 | None:intergenic | 35.0% | |
| TGAAGGCTTAGAGTTTGATT+AGG | + | chr1_1:75128391-75128410 | None:intergenic | 35.0% | |
| GCCTTCATTCTCTACATAAT+AGG | - | chr1_1:75128404-75128423 | Msa0043730:CDS | 35.0% | |
| CCCTATTATGTAGAGAATGA+AGG | + | chr1_1:75128408-75128427 | None:intergenic | 35.0% | |
| ! | GTATAATTTTTGCTGCTCCT+AGG | - | chr1_1:75128461-75128480 | Msa0043730:CDS | 35.0% |
| TTCTTGATGTGCAATAAGTC+TGG | + | chr1_1:75128499-75128518 | None:intergenic | 35.0% | |
| AAACACCAAACAATTTGCAC+TGG | - | chr1_1:75128631-75128650 | Msa0043730:intron | 35.0% | |
| ATACTCCAGTGCAAATTGTT+TGG | + | chr1_1:75128639-75128658 | None:intergenic | 35.0% | |
| !! | TTGAGTTTTATCTCTCCAGA+TGG | + | chr1_1:75128748-75128767 | None:intergenic | 35.0% |
| ATCTGGAGAGATAAAACTCA+AGG | - | chr1_1:75128747-75128766 | Msa0043730:intron | 35.0% | |
| GATAAAACTCAAGGTCTTGA+CGG | - | chr1_1:75128756-75128775 | Msa0043730:intron | 35.0% | |
| CAGAAGAATACAATCTAGCA+TGG | - | chr1_1:75128785-75128804 | Msa0043730:intron | 35.0% | |
| CTAAAACTGCAGCAGAATTT+AGG | - | chr1_1:75128815-75128834 | Msa0043730:intron | 35.0% | |
| ACTAATTCTTCCTTCACTGT+TGG | - | chr1_1:75128882-75128901 | Msa0043730:intron | 35.0% | |
| TTGCAATAATATCAGGTGAC+AGG | + | chr1_1:75129031-75129050 | None:intergenic | 35.0% | |
| !! | CAGGGCTTTTTCTTAGAATT+TGG | - | chr1_1:75129163-75129182 | Msa0043730:intron | 35.0% |
| !! | TTACAAGCCAGTTTTATAGG+GGG | + | chr1_1:75129206-75129225 | None:intergenic | 35.0% |
| AAAAGTCCTGCAGATATACA+AGG | + | chr1_1:75129346-75129365 | None:intergenic | 35.0% | |
| ! | CCCTATAAAACTAGCTTGTA+TGG | - | chr1_1:75129398-75129417 | Msa0043730:intron | 35.0% |
| ! | TAAAACTAGCTTGTATGGTG+AGG | - | chr1_1:75129403-75129422 | Msa0043730:intron | 35.0% |
| ACTGGATGAGATTCAAAACT+TGG | + | chr1_1:75129447-75129466 | None:intergenic | 35.0% | |
| ! | GCCATCTTAGAATTTGAGTT+AGG | - | chr1_1:75129570-75129589 | Msa0043730:intron | 35.0% |
| ! | GCCTAACTCAAATTCTAAGA+TGG | + | chr1_1:75129574-75129593 | None:intergenic | 35.0% |
| TTAGGCCTAACTTAACTCAT+TGG | - | chr1_1:75129588-75129607 | Msa0043730:intron | 35.0% | |
| CATGATATTAAATGGCATCG+TGG | + | chr1_1:75129657-75129676 | None:intergenic | 35.0% | |
| TGGACACGTAAATGTATCAA+CGG | + | chr1_1:75129890-75129909 | None:intergenic | 35.0% | |
| ! | GATTTTCTCATATTACCTGC+AGG | - | chr1_1:75129988-75130007 | Msa0043730:intron | 35.0% |
| ATCCTCTGATATATTGGAGA+AGG | - | chr1_1:75130258-75130277 | Msa0043730:intron | 35.0% | |
| ACATTGTTAAGACCTTACTG+CGG | - | chr1_1:75130433-75130452 | Msa0043730:CDS | 35.0% | |
| AAGCAACAAAAGTTAAAGCC+AGG | - | chr1_1:75130653-75130672 | Msa0043730:CDS | 35.0% | |
| GTTGATCTTAACTTTGTAGG+TGG | + | chr1_1:75130701-75130720 | None:intergenic | 35.0% | |
| ! | GAGAAATATTTTCTGAGCGA+AGG | - | chr1_1:75130726-75130745 | Msa0043730:intron | 35.0% |
| ! | CATACTGAATCGATTTAGCA+AGG | + | chr1_1:75130761-75130780 | None:intergenic | 35.0% |
| !!! | CGTTTTTTCTACTCGTTGGT+GGG | - | chr1_1:75126054-75126073 | Msa0043730:three_prime_UTR | 40.0% |
| TCAACTCAAACAAATGCGGA+AGG | - | chr1_1:75126302-75126321 | Msa0043730:three_prime_UTR | 40.0% | |
| ! | GGAGATTTCCCAATTTTTGC+AGG | - | chr1_1:75126323-75126342 | Msa0043730:three_prime_UTR | 40.0% |
| ! | ATTTCCCAATTTTTGCAGGC+TGG | - | chr1_1:75126327-75126346 | Msa0043730:three_prime_UTR | 40.0% |
| TTGACCAGCCTGCAAAAATT+GGG | + | chr1_1:75126334-75126353 | None:intergenic | 40.0% | |
| CAATTATAGGTACACGTGCA+AGG | + | chr1_1:75126536-75126555 | None:intergenic | 40.0% | |
| TACAGAAAGTGATCACTCTG+TGG | + | chr1_1:75126685-75126704 | None:intergenic | 40.0% | |
| TTGTGCAAGATTGTGAAGCA+TGG | + | chr1_1:75126711-75126730 | None:intergenic | 40.0% | |
| TGTGCTAAAAAGTGAGGAAC+TGG | - | chr1_1:75126975-75126994 | Msa0043730:intron | 40.0% | |
| TCAAATACGAGGTCCTACAT+AGG | - | chr1_1:75127367-75127386 | Msa0043730:intron | 40.0% | |
| ATCCACACCACAATGAAAAC+AGG | - | chr1_1:75127657-75127676 | Msa0043730:intron | 40.0% | |
| TCCACACCACAATGAAAACA+GGG | - | chr1_1:75127658-75127677 | Msa0043730:intron | 40.0% | |
| ! | AACTTCCCCTGTTTTCATTG+TGG | + | chr1_1:75127667-75127686 | None:intergenic | 40.0% |
| ACGCCTTGTGATAGAAAACA+AGG | - | chr1_1:75127690-75127709 | Msa0043730:intron | 40.0% | |
| !!! | CGACCTTGTTTTCTATCACA+AGG | + | chr1_1:75127696-75127715 | None:intergenic | 40.0% |
| GAAAACAAGGTCGAAGAGAA+CGG | - | chr1_1:75127703-75127722 | Msa0043730:intron | 40.0% | |
| TTCATGCGTTTAAAAAGCCC+AGG | - | chr1_1:75127797-75127816 | Msa0043730:intron | 40.0% | |
| TCATGCGTTTAAAAAGCCCA+GGG | - | chr1_1:75127798-75127817 | Msa0043730:intron | 40.0% | |
| ! | AAGGGTTTTGCAAAAACCCT+GGG | + | chr1_1:75127817-75127836 | None:intergenic | 40.0% |
| ! | TTGGCCATCCATTTTGCAAT+GGG | + | chr1_1:75127855-75127874 | None:intergenic | 40.0% |
| ATCATTGGAGATCGTTGTTG+TGG | + | chr1_1:75127912-75127931 | None:intergenic | 40.0% | |
| CTACTTTATCGGTCCATGTT+CGG | + | chr1_1:75128073-75128092 | None:intergenic | 40.0% | |
| TTGTCTGTGTATGTTGACGT+TGG | - | chr1_1:75128106-75128125 | Msa0043730:CDS | 40.0% | |
| TCTGGTATATCAGAACACCT+AGG | + | chr1_1:75128481-75128500 | None:intergenic | 40.0% | |
| AATATCAGGTGACAGGATCA+AGG | + | chr1_1:75129024-75129043 | None:intergenic | 40.0% | |
| ! | ATCATGAGGCAAGGAGTATA+AGG | + | chr1_1:75129066-75129085 | None:intergenic | 40.0% |
| GGAAAAACTGACACATCATG+AGG | + | chr1_1:75129080-75129099 | None:intergenic | 40.0% | |
| AAAAGCCCTGCAGATATAAG+AGG | + | chr1_1:75129153-75129172 | None:intergenic | 40.0% | |
| !! | TACAAGCCAGTTTTATAGGG+GGG | + | chr1_1:75129205-75129224 | None:intergenic | 40.0% |
| AGGACTGAGATATGAAAACG+TGG | + | chr1_1:75129254-75129273 | None:intergenic | 40.0% | |
| ATAAGTGACTCTAGCTGTGT+GGG | - | chr1_1:75129304-75129323 | Msa0043730:intron | 40.0% | |
| !! | CTTAGAATTTGAGTTGGGTC+TGG | - | chr1_1:75129368-75129387 | Msa0043730:intron | 40.0% |
| CAGAATCAAGTAGTGAGAAC+GGG | + | chr1_1:75129811-75129830 | None:intergenic | 40.0% | |
| CCAGAATCAAGTAGTGAGAA+CGG | + | chr1_1:75129812-75129831 | None:intergenic | 40.0% | |
| TTCTCACTACTTGATTCTGG+TGG | - | chr1_1:75129812-75129831 | Msa0043730:intron | 40.0% | |
| AGCCTTCTCCAATATATCAG+AGG | + | chr1_1:75130263-75130282 | None:intergenic | 40.0% | |
| TCACTTGCACATAGTGACTT+TGG | - | chr1_1:75130337-75130356 | Msa0043730:intron | 40.0% | |
| TGACTTTGGATCATTGAAGC+TGG | - | chr1_1:75130351-75130370 | Msa0043730:intron | 40.0% | |
| TTTGGATCATTGAAGCTGGA+AGG | - | chr1_1:75130355-75130374 | Msa0043730:CDS | 40.0% | |
| TTTGCTTGGTATCTCAAGGT+TGG | - | chr1_1:75130409-75130428 | Msa0043730:CDS | 40.0% | |
| GTACAGTAAATACCGCAGTA+AGG | + | chr1_1:75130448-75130467 | None:intergenic | 40.0% | |
| CACCTTGTAAATCCTGACAT+GGG | - | chr1_1:75130588-75130607 | Msa0043730:CDS | 40.0% | |
| ACCTTGTAAATCCTGACATG+GGG | - | chr1_1:75130589-75130608 | Msa0043730:CDS | 40.0% | |
| !!! | TCTTTTTTCGTGCCTACGAT+GGG | - | chr1_1:75130783-75130802 | Msa0043730:intron | 40.0% |
| ! | AGCGTGGTGATTTAGTTTCG+TGG | - | chr1_1:75125970-75125989 | Msa0043730:three_prime_UTR | 45.0% |
| !!! | GAGGCGTTTTTTCTACTCGT+TGG | - | chr1_1:75126050-75126069 | Msa0043730:three_prime_UTR | 45.0% |
| !!! | GCGTTTTTTCTACTCGTTGG+TGG | - | chr1_1:75126053-75126072 | Msa0043730:three_prime_UTR | 45.0% |
| ACTTCATGCGTGAAATTGCG+AGG | + | chr1_1:75126260-75126279 | None:intergenic | 45.0% | |
| CTTGACCAGCCTGCAAAAAT+TGG | + | chr1_1:75126335-75126354 | None:intergenic | 45.0% | |
| ! | CTCTAAGGGTCTGCTTTGAT+TGG | + | chr1_1:75127332-75127351 | None:intergenic | 45.0% |
| AAAGCAGACCCTTAGAGATG+AGG | - | chr1_1:75127335-75127354 | Msa0043730:intron | 45.0% | |
| ! | TACACTGGCCTCATCTCTAA+GGG | + | chr1_1:75127346-75127365 | None:intergenic | 45.0% |
| GACCTCGTATTTGACTACAC+TGG | + | chr1_1:75127361-75127380 | None:intergenic | 45.0% | |
| TACGAGGTCCTACATAGGAT+TGG | - | chr1_1:75127372-75127391 | Msa0043730:intron | 45.0% | |
| AGGTCCTACATAGGATTGGA+AGG | - | chr1_1:75127376-75127395 | Msa0043730:intron | 45.0% | |
| GGTCCTACATAGGATTGGAA+GGG | - | chr1_1:75127377-75127396 | Msa0043730:intron | 45.0% | |
| GTCCTACATAGGATTGGAAG+GGG | - | chr1_1:75127378-75127397 | Msa0043730:intron | 45.0% | |
| TCCTACATAGGATTGGAAGG+GGG | - | chr1_1:75127379-75127398 | Msa0043730:intron | 45.0% | |
| CCACACCACAATGAAAACAG+GGG | - | chr1_1:75127659-75127678 | Msa0043730:intron | 45.0% | |
| GAACAGGGCATAAAGGACAA+CGG | - | chr1_1:75127745-75127764 | Msa0043730:intron | 45.0% | |
| AACAGGGCATAAAGGACAAC+GGG | - | chr1_1:75127746-75127765 | Msa0043730:intron | 45.0% | |
| ! | GAAGGGTTTTGCAAAAACCC+TGG | + | chr1_1:75127818-75127837 | None:intergenic | 45.0% |
| AAGGCCCATTGCAAAATGGA+TGG | - | chr1_1:75127848-75127867 | Msa0043730:intron | 45.0% | |
| ! | GTTGGCCATCCATTTTGCAA+TGG | + | chr1_1:75127856-75127875 | None:intergenic | 45.0% |
| TGTGATGCAGGCAAGATCAT+TGG | + | chr1_1:75127927-75127946 | None:intergenic | 45.0% | |
| ATGGTAACATGCTGTGATGC+AGG | + | chr1_1:75127939-75127958 | None:intergenic | 45.0% | |
| TGCATCACAGCATGTTACCA+TGG | - | chr1_1:75127938-75127957 | Msa0043730:intron | 45.0% | |
| ACAGCATGTTACCATGGTCA+TGG | - | chr1_1:75127944-75127963 | Msa0043730:intron | 45.0% | |
| TCAAAATCACGAGGTCACGT+AGG | + | chr1_1:75127988-75128007 | None:intergenic | 45.0% | |
| CCAAGGTAGTCAAAATCACG+AGG | + | chr1_1:75127997-75128016 | None:intergenic | 45.0% | |
| !!! | CCTCGTGATTTTGACTACCT+TGG | - | chr1_1:75127994-75128013 | Msa0043730:intron | 45.0% |
| !! | TTAGTATTGAGCGCCGAACA+TGG | - | chr1_1:75128057-75128076 | Msa0043730:intron | 45.0% |
| ATTCAATGTTGCAGCTGGAG+TGG | + | chr1_1:75128149-75128168 | None:intergenic | 45.0% | |
| ACATAATAGGGAATGCCCGT+CGG | - | chr1_1:75128417-75128436 | Msa0043730:CDS | 45.0% | |
| TCTGAACTTCGTCCTGATTC+AGG | - | chr1_1:75128562-75128581 | Msa0043730:intron | 45.0% | |
| CTTTCAGTTAGTGCTCCATC+TGG | - | chr1_1:75128730-75128749 | Msa0043730:intron | 45.0% | |
| AACTGACACATCATGAGGCA+AGG | + | chr1_1:75129075-75129094 | None:intergenic | 45.0% | |
| GAGTCACTTATCAATGCTCG+TGG | + | chr1_1:75129295-75129314 | None:intergenic | 45.0% | |
| GATAAGTGACTCTAGCTGTG+TGG | - | chr1_1:75129303-75129322 | Msa0043730:intron | 45.0% | |
| GTGTGTTAAGAGTCTCACAC+TGG | + | chr1_1:75129465-75129484 | None:intergenic | 45.0% | |
| !! | AGATGTCCAGTTTGGTGTGA+GGG | + | chr1_1:75129490-75129509 | None:intergenic | 45.0% |
| CCGTTCTCACTACTTGATTC+TGG | - | chr1_1:75129809-75129828 | Msa0043730:intron | 45.0% | |
| ACCTGTAGCATGTCAATCAC+TGG | - | chr1_1:75129845-75129864 | Msa0043730:intron | 45.0% | |
| ACCAGTGATTGACATGCTAC+AGG | + | chr1_1:75129849-75129868 | None:intergenic | 45.0% | |
| TTCTCATATTACCTGCAGGG+TGG | - | chr1_1:75129992-75130011 | Msa0043730:intron | 45.0% | |
| ACGATTTGCAGAAGCTATGG+CGG | + | chr1_1:75130290-75130309 | None:intergenic | 45.0% | |
| TGCACGATTTGCAGAAGCTA+TGG | + | chr1_1:75130293-75130312 | None:intergenic | 45.0% | |
| GCACCTTGTAAATCCTGACA+TGG | - | chr1_1:75130587-75130606 | Msa0043730:CDS | 45.0% | |
| ACCCCATGTCAGGATTTACA+AGG | + | chr1_1:75130593-75130612 | None:intergenic | 45.0% | |
| CAACGGAACTTTGATGTGCT+TGG | - | chr1_1:75130618-75130637 | Msa0043730:CDS | 45.0% | |
| TAAAGCCAGGTTCTCTCTGT+TGG | - | chr1_1:75130666-75130685 | Msa0043730:intron | 45.0% | |
| !! | GTTCTCTCTGTTGGTAGCAA+TGG | - | chr1_1:75130675-75130694 | Msa0043730:intron | 45.0% |
| !!! | GTCTTTTTTCGTGCCTACGA+TGG | - | chr1_1:75130782-75130801 | Msa0043730:intron | 45.0% |
| TGATCTGAGGAAGCAAAGCG+TGG | - | chr1_1:75125954-75125973 | Msa0043730:three_prime_UTR | 50.0% | |
| TGCGTGAAATTGCGAGGTTG+AGG | + | chr1_1:75126254-75126273 | None:intergenic | 50.0% | |
| ! | CTACACTGGCCTCATCTCTA+AGG | + | chr1_1:75127347-75127366 | None:intergenic | 50.0% |
| GGCCAGTGTAGTCAAATACG+AGG | - | chr1_1:75127356-75127375 | Msa0043730:intron | 50.0% | |
| ACCCCCTTCCAATCCTATGT+AGG | + | chr1_1:75127383-75127402 | None:intergenic | 50.0% | |
| ! | CCCCTGTTTTCATTGTGGTG+TGG | + | chr1_1:75127662-75127681 | None:intergenic | 50.0% |
| GAGGAGAGAACAGGGCATAA+AGG | - | chr1_1:75127738-75127757 | Msa0043730:intron | 50.0% | |
| AACGGGAGAATGACGCAGTT+AGG | - | chr1_1:75127763-75127782 | Msa0043730:intron | 50.0% | |
| AAACCCTTCCCGTTTCAGCA+AGG | - | chr1_1:75127829-75127848 | Msa0043730:intron | 50.0% | |
| TGCAATGGGCCTTGCTGAAA+CGG | + | chr1_1:75127841-75127860 | None:intergenic | 50.0% | |
| CAGCAAGGCCCATTGCAAAA+TGG | - | chr1_1:75127844-75127863 | Msa0043730:intron | 50.0% | |
| TCGAGATCGCGAGTTATGGT+AGG | + | chr1_1:75127889-75127908 | None:intergenic | 50.0% | |
| TTACCATGGTCATGGATCGC+AGG | - | chr1_1:75127952-75127971 | Msa0043730:intron | 50.0% | |
| ATGGCTTCTCGCAATTCCGA+CGG | + | chr1_1:75128436-75128455 | None:intergenic | 50.0% | |
| ATCAAGGATGAAGGTGGTCG+CGG | + | chr1_1:75129008-75129027 | None:intergenic | 50.0% | |
| GACAGGATCAAGGATGAAGG+TGG | + | chr1_1:75129014-75129033 | None:intergenic | 50.0% | |
| GGTGACAGGATCAAGGATGA+AGG | + | chr1_1:75129017-75129036 | None:intergenic | 50.0% | |
| CCACAACTAGAGTCGCTTCT+CGG | + | chr1_1:75129110-75129129 | None:intergenic | 50.0% | |
| AGCTCACCCCCCTATAAAAC+TGG | - | chr1_1:75129196-75129215 | Msa0043730:intron | 50.0% | |
| GGTAGAGCTGTCACATCAAG+AGG | + | chr1_1:75129274-75129293 | None:intergenic | 50.0% | |
| !! | GATGTCCAGTTTGGTGTGAG+GGG | + | chr1_1:75129489-75129508 | None:intergenic | 50.0% |
| !! | CAGATGTCCAGTTTGGTGTG+AGG | + | chr1_1:75129491-75129510 | None:intergenic | 50.0% |
| CTCACACCAAACTGGACATC+TGG | - | chr1_1:75129489-75129508 | Msa0043730:intron | 50.0% | |
| !! | GGAGCAAAGCAAGTTGGTGT+CGG | - | chr1_1:75130013-75130032 | Msa0043730:intron | 50.0% |
| CTGACATGGGGTGAACACAA+CGG | - | chr1_1:75130601-75130620 | Msa0043730:CDS | 50.0% | |
| TGCTACCAACAGAGAGAACC+TGG | + | chr1_1:75130674-75130693 | None:intergenic | 50.0% | |
| TCTTGCATTGAGCCCATCGT+AGG | + | chr1_1:75130798-75130817 | None:intergenic | 50.0% | |
| GTCGAAGAGAACGGCGTAGA+GGG | - | chr1_1:75127712-75127731 | Msa0043730:intron | 55.0% | |
| TCGAAGAGAACGGCGTAGAG+GGG | - | chr1_1:75127713-75127732 | Msa0043730:intron | 55.0% | |
| GCAATGGGCCTTGCTGAAAC+GGG | + | chr1_1:75127840-75127859 | None:intergenic | 55.0% | |
| GTGGTCGAGATCGCGAGTTA+TGG | + | chr1_1:75127893-75127912 | None:intergenic | 55.0% | |
| GATCCTGCGATCCATGACCA+TGG | + | chr1_1:75127958-75127977 | None:intergenic | 55.0% | |
| GACTACCTTGGATGAGCCGT+AGG | - | chr1_1:75128006-75128025 | Msa0043730:intron | 55.0% | |
| TTGGTCCTACGGCTCATCCA+AGG | + | chr1_1:75128014-75128033 | None:intergenic | 55.0% | |
| TGGCTTCTCGCAATTCCGAC+GGG | + | chr1_1:75128435-75128454 | None:intergenic | 55.0% | |
| GTGCGATTCACGCCTGAATC+AGG | + | chr1_1:75128577-75128596 | None:intergenic | 55.0% | |
| TCAAGGATGAAGGTGGTCGC+GGG | + | chr1_1:75129007-75129026 | None:intergenic | 55.0% | |
| CCGAGAAGCGACTCTAGTTG+TGG | - | chr1_1:75129107-75129126 | Msa0043730:intron | 55.0% | |
| ACACACCCCTCACACCAAAC+TGG | - | chr1_1:75129481-75129500 | Msa0043730:intron | 55.0% | |
| CAGGCTCCAGATGTCCAGTT+TGG | + | chr1_1:75129498-75129517 | None:intergenic | 55.0% | |
| ! | CATCTGGAGCCTGATGCAAG+TGG | - | chr1_1:75129505-75129524 | Msa0043730:intron | 55.0% |
| GCTATCGAGCCACTTGCATC+AGG | + | chr1_1:75129517-75129536 | None:intergenic | 55.0% | |
| GATGCAAGTGGCTCGATAGC+AGG | - | chr1_1:75129517-75129536 | Msa0043730:intron | 55.0% | |
| CTCGATAGCAGGTGGTCTGA+TGG | - | chr1_1:75129528-75129547 | Msa0043730:intron | 55.0% | |
| CAGGGTGGAGCAAAGCAAGT+TGG | - | chr1_1:75130007-75130026 | Msa0043730:intron | 55.0% | |
| CGTTGTGTTCACCCCATGTC+AGG | + | chr1_1:75130603-75130622 | None:intergenic | 55.0% | |
| GGTCGAAGAGAACGGCGTAG+AGG | - | chr1_1:75127711-75127730 | Msa0043730:intron | 60.0% | |
| AAGAGAACGGCGTAGAGGGG+AGG | - | chr1_1:75127716-75127735 | Msa0043730:intron | 60.0% | |
| AGAGGGGAGGAGGAGAGAAC+AGG | - | chr1_1:75127729-75127748 | Msa0043730:intron | 60.0% | |
| GAGGGGAGGAGGAGAGAACA+GGG | - | chr1_1:75127730-75127749 | Msa0043730:intron | 60.0% | |
| GGGCCTTGCTGAAACGGGAA+GGG | + | chr1_1:75127835-75127854 | None:intergenic | 60.0% | |
| TGGGCCTTGCTGAAACGGGA+AGG | + | chr1_1:75127836-75127855 | None:intergenic | 60.0% | |
| GCAAGTGGCTCGATAGCAGG+TGG | - | chr1_1:75129520-75129539 | Msa0043730:intron | 60.0% | |
| CTTGCTTTGCTCCACCCTGC+AGG | + | chr1_1:75130006-75130025 | None:intergenic | 60.0% | |
| AGAACGGCGTAGAGGGGAGG+AGG | - | chr1_1:75127719-75127738 | Msa0043730:intron | 65.0% | |
| !! | GAGTCGCTTCTCGGTGCTCG+TGG | + | chr1_1:75129101-75129120 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 75125906 | 75131012 | 75125906 | ID=Msa0043730;Name=Msa0043730 |
| chr1_1 | mRNA | 75125906 | 75131012 | 75125906 | ID=Msa0043730-mRNA-1;Parent=Msa0043730;Name=Msa0043730-mRNA-1;_AED=0.06;_eAED=0.06;_QI=116|1|1|1|0.8|0.83|6|622|326 |
| chr1_1 | exon | 75125906 | 75126908 | 75125906 | ID=Msa0043730-mRNA-1:exon:25342;Parent=Msa0043730-mRNA-1 |
| chr1_1 | exon | 75128060 | 75128200 | 75128060 | ID=Msa0043730-mRNA-1:exon:25341;Parent=Msa0043730-mRNA-1 |
| chr1_1 | exon | 75128321 | 75128492 | 75128321 | ID=Msa0043730-mRNA-1:exon:25340;Parent=Msa0043730-mRNA-1 |
| chr1_1 | exon | 75130353 | 75130456 | 75130353 | ID=Msa0043730-mRNA-1:exon:25339;Parent=Msa0043730-mRNA-1 |
| chr1_1 | exon | 75130544 | 75130676 | 75130544 | ID=Msa0043730-mRNA-1:exon:25338;Parent=Msa0043730-mRNA-1 |
| chr1_1 | exon | 75130847 | 75131012 | 75130847 | ID=Msa0043730-mRNA-1:exon:25337;Parent=Msa0043730-mRNA-1 |
| chr1_1 | five_prime_UTR | 75130897 | 75131012 | 75130897 | ID=Msa0043730-mRNA-1:five_prime_utr;Parent=Msa0043730-mRNA-1 |
| chr1_1 | CDS | 75130847 | 75130896 | 75130847 | ID=Msa0043730-mRNA-1:cds;Parent=Msa0043730-mRNA-1 |
| chr1_1 | CDS | 75130544 | 75130676 | 75130544 | ID=Msa0043730-mRNA-1:cds;Parent=Msa0043730-mRNA-1 |
| chr1_1 | CDS | 75130353 | 75130456 | 75130353 | ID=Msa0043730-mRNA-1:cds;Parent=Msa0043730-mRNA-1 |
| chr1_1 | CDS | 75128321 | 75128492 | 75128321 | ID=Msa0043730-mRNA-1:cds;Parent=Msa0043730-mRNA-1 |
| chr1_1 | CDS | 75128060 | 75128200 | 75128060 | ID=Msa0043730-mRNA-1:cds;Parent=Msa0043730-mRNA-1 |
| chr1_1 | CDS | 75126528 | 75126908 | 75126528 | ID=Msa0043730-mRNA-1:cds;Parent=Msa0043730-mRNA-1 |
| chr1_1 | three_prime_UTR | 75125906 | 75126527 | 75125906 | ID=Msa0043730-mRNA-1:three_prime_utr;Parent=Msa0043730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
