AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0979250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0979250 MtrunA17_Chr6g0458341 98.566 279 4 0 1 279 1 279 0.0 560
Msa0979250 MtrunA17_Chr7g0230151 62.094 277 103 2 4 279 2 277 3.01e-130 370
Msa0979250 MtrunA17_Chr7g0230141 60.870 276 101 2 4 279 2 270 5.44e-118 339
Msa0979250 MtrunA17_Chr6g0458361 57.207 222 93 1 42 261 25 246 7.13e-86 257
Msa0979250 MtrunA17_Chr6g0458381 50.838 179 64 2 116 272 2 178 3.39e-57 181
Msa0979250 MtrunA17_Chr6g0458371 62.727 110 41 0 6 115 4 113 7.07e-41 139
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0979250 AT5G40670.1 62.030 266 99 2 4 269 2 265 1.47e-118 341

Find 89 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCATTCTCCAAATCTTTA+AGG 0.070760 6_4:-15840788 Msa0979250:three_prime_UTR
TTTCACTTATTGAGTTTATA+AGG 0.281781 6_4:+15846176 None:intergenic
TGATATTGAAACCGAACATT+AGG 0.283373 6_4:+15845768 None:intergenic
GACTCTTGGGTGAATTTCTC+TGG 0.292974 6_4:-15841543 Msa0979250:CDS
GTTGTAAGGCCTTAAAGATT+TGG 0.308440 6_4:+15840779 None:intergenic
TCCCTTCCAAATCCTGGCTT+TGG 0.312529 6_4:-15842471 Msa0979250:CDS
AATTAGCCAAAGCCAGGATT+TGG 0.321547 6_4:+15842465 None:intergenic
AAAATAGCATACACCGTGTT+TGG 0.343855 6_4:-15846030 Msa0979250:CDS
CAGCACAATGCAAGTAGTTC+TGG 0.352114 6_4:-15841933 Msa0979250:CDS
AATTTATCTTGAACTATTCA+AGG 0.353976 6_4:-15845966 Msa0979250:CDS
ATAGTTCTCTTCTTGTTGTA+AGG 0.358257 6_4:+15840765 None:intergenic
ATGTTGTCATCGAGTTTAGA+AGG 0.377471 6_4:+15841142 None:intergenic
CATCCCCACTAACCTCATAA+TGG 0.393898 6_4:+15840956 None:intergenic
GGCCTTAAAGATTTGGAGAA+TGG 0.402110 6_4:+15840786 None:intergenic
AGCATTGTAGATGAGGTATA+AGG 0.405246 6_4:+15845806 None:intergenic
ATTCGGCTTCTAGTGTTACC+TGG 0.410697 6_4:-15840678 Msa0979250:three_prime_UTR
GATATTGAAACCGAACATTA+GGG 0.417722 6_4:+15845769 None:intergenic
GTTCCAAGTTGCAATTTATG+AGG 0.419902 6_4:-15843841 Msa0979250:intron
TAGCATTCCCTTCCAAATCC+TGG 0.429503 6_4:-15842477 Msa0979250:CDS
CCATTCCTCCACAGAAATCA+AGG 0.431521 6_4:+15841707 None:intergenic
TTTGAATTTGTAATTATGTT+TGG 0.432269 6_4:-15841069 Msa0979250:exon
ATCCCCACTAACCTCATAAT+GGG 0.432323 6_4:+15840957 None:intergenic
TCTTGAACTATTCAAGGAAA+AGG 0.432835 6_4:-15845960 Msa0979250:intron
GTGAATTTCTCTGGGAACCT+TGG 0.434548 6_4:-15841534 Msa0979250:CDS
TGGAAAAGTATTGTTATCTC+TGG 0.434586 6_4:-15841514 Msa0979250:intron
GATTTGTGAAAGTGATTGTT+TGG 0.437640 6_4:-15840863 Msa0979250:three_prime_UTR
TCAGCCACCGGCACATTTGA+AGG 0.441029 6_4:+15841097 None:intergenic
GGTTAGTGGGGATGCTCTCT+TGG 0.442986 6_4:-15840947 Msa0979250:three_prime_UTR
GAACTGCGTGCTATACAGAT+AGG 0.448918 6_4:-15840922 Msa0979250:three_prime_UTR
TGTACTTTAGCCCTAATGTT+CGG 0.449324 6_4:-15845779 Msa0979250:CDS
GATGAGGTATAAGGTGTGTT+TGG 0.460857 6_4:+15845815 None:intergenic
TTGGAAGCTGTGAATATCAT+TGG 0.462634 6_4:-15840844 Msa0979250:three_prime_UTR
AATATCTTCCAACTTCTATG+AGG 0.463232 6_4:+15846112 None:intergenic
AATAATTCCCTCATAGAAGT+TGG 0.464424 6_4:-15846120 Msa0979250:five_prime_UTR
AATCCCCACCAACCTTATCA+TGG 0.468507 6_4:+15840982 None:intergenic
ATATATTTATTATCATAAGA+TGG 0.474215 6_4:-15846082 Msa0979250:exon
TTTCCCATTATGAGGTTAGT+GGG 0.483975 6_4:-15840960 Msa0979250:three_prime_UTR
AGCACAGATGGATTTAGCAT+TGG 0.502304 6_4:-15841739 Msa0979250:CDS
CACACTAGCTAAAATCATAC+AGG 0.502798 6_4:+15841014 None:intergenic
CCTTGATTTCTGTGGAGGAA+TGG 0.503924 6_4:-15841707 Msa0979250:CDS
GAATAGTTCAAGATAAATTG+AGG 0.507156 6_4:+15845970 None:intergenic
AAATATATCTCACTTAAAGA+TGG 0.509564 6_4:+15842441 None:intergenic
TTCATGATCAAGAGCACAGA+TGG 0.515076 6_4:-15841751 Msa0979250:CDS
GCAACGTCATTTGCAGCTAC+AGG 0.516019 6_4:+15843903 None:intergenic
AAATATGTGTGTAGATTGTA+TGG 0.517990 6_4:-15840716 Msa0979250:three_prime_UTR
TAGCATACACCGTGTTTGGA+TGG 0.518940 6_4:-15846026 Msa0979250:CDS
ACAAGAAGAGAACTATACTT+TGG 0.520397 6_4:-15840758 Msa0979250:three_prime_UTR
TTCCCATGATAAGGTTGGTG+GGG 0.521220 6_4:-15840985 Msa0979250:three_prime_UTR
GGCTAAAGAAGGCTCCCATT+CGG 0.522238 6_4:-15840695 Msa0979250:three_prime_UTR
GGAGTGACTCCATGCCTGAT+GGG 0.530228 6_4:+15840647 None:intergenic
CAAGTCTCCTTCAAATGTGC+CGG 0.533047 6_4:-15841104 Msa0979250:CDS
ACTCTTGGGTGAATTTCTCT+GGG 0.540084 6_4:-15841542 Msa0979250:CDS
AGGAGTGACTCCATGCCTGA+TGG 0.540502 6_4:+15840646 None:intergenic
CGAAACAGCATGTGTTGAGA+AGG 0.543356 6_4:+15843881 None:intergenic
GGTAACACTAGAAGCCGAAT+GGG 0.548092 6_4:+15840681 None:intergenic
AACTATCAAATATATTCCAC+AGG 0.552047 6_4:-15841909 Msa0979250:intron
GATGGAAATTAGCCAAAGCC+AGG 0.552552 6_4:+15842459 None:intergenic
AACATTAGGGCTAAAGTACA+AGG 0.554362 6_4:+15845782 None:intergenic
GTAGATTGTATGGCTAAAGA+AGG 0.559116 6_4:-15840706 Msa0979250:three_prime_UTR
TTCGGCTTCTAGTGTTACCT+GGG 0.559215 6_4:-15840677 Msa0979250:three_prime_UTR
AGCCAAAGCCAGGATTTGGA+AGG 0.564912 6_4:+15842469 None:intergenic
GTTGGAAATTGTAGTGTGGT+GGG 0.573982 6_4:-15845870 Msa0979250:intron
ACTGTGGTGTGGATTACTGT+TGG 0.575250 6_4:-15842514 Msa0979250:CDS
ATCCCCACCAACCTTATCAT+GGG 0.575454 6_4:+15840983 None:intergenic
AATGGCAAACTATGCTCAGA+TGG 0.577664 6_4:-15841689 Msa0979250:CDS
GTCTCCTTCAAATGTGCCGG+TGG 0.578990 6_4:-15841101 Msa0979250:CDS
AATGTGTTCCTTGATTTCTG+TGG 0.579157 6_4:-15841715 Msa0979250:CDS
TTTCCCATGATAAGGTTGGT+GGG 0.581678 6_4:-15840986 Msa0979250:three_prime_UTR
AACTGCGTGCTATACAGATA+GGG 0.583379 6_4:-15840921 Msa0979250:three_prime_UTR
ATATCTTCCAACTTCTATGA+GGG 0.584001 6_4:+15846113 None:intergenic
CATTTGAAGGAGACTTGATG+AGG 0.590184 6_4:+15841110 None:intergenic
ACAAGGAAGCATTGTAGATG+AGG 0.592865 6_4:+15845799 None:intergenic
GTGTTCCTTGATTTCTGTGG+AGG 0.594358 6_4:-15841712 Msa0979250:CDS
AGGTAACACTAGAAGCCGAA+TGG 0.600450 6_4:+15840680 None:intergenic
GAGTGACTCCATGCCTGATG+GGG 0.606147 6_4:+15840648 None:intergenic
TTCCCATTATGAGGTTAGTG+GGG 0.606252 6_4:-15840959 Msa0979250:three_prime_UTR
GTACCTCATAAATTGCAACT+TGG 0.607384 6_4:+15843838 None:intergenic
GCCAAAGCCAGGATTTGGAA+GGG 0.608147 6_4:+15842470 None:intergenic
AGTTGGAAATTGTAGTGTGG+TGG 0.612895 6_4:-15845871 Msa0979250:intron
AACTTGGAACAATAACGCTA+AGG 0.614468 6_4:+15843854 None:intergenic
ATCGACATTTGTCATAATCG+AGG 0.627549 6_4:-15840898 Msa0979250:three_prime_UTR
ATTTGAAGGAGACTTGATGA+GGG 0.629173 6_4:+15841111 None:intergenic
ATAAGATGGAGGAGACAGCA+TGG 0.637222 6_4:-15846068 Msa0979250:exon
TATTTATTATCATAAGATGG+AGG 0.657150 6_4:-15846079 Msa0979250:exon
AGTGACTCCATGCCTGATGG+GGG 0.665374 6_4:+15840649 None:intergenic
AAAAGCAATCCATCCAAACA+CGG 0.666967 6_4:+15846017 None:intergenic
TGGGAATCATCACTGTGGTG+TGG 0.672658 6_4:-15842525 Msa0979250:CDS
TTTGAAGGAGACTTGATGAG+GGG 0.680455 6_4:+15841112 None:intergenic
CACAATGGGAATCATCACTG+TGG 0.754261 6_4:-15842530 Msa0979250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAATAAAATAAAAAA+AGG + chr6_4:15845070-15845089 None:intergenic 0.0%
!! ATATATTTATTATCATAAGA+TGG - chr6_4:15840815-15840834 Msa0979250:three_prime_UTR 10.0%
!!! ATCTTAGTTAATTTTTTTTT+AGG + chr6_4:15841633-15841652 None:intergenic 10.0%
!!! AAACATATTAGATATTTTTT+TGG - chr6_4:15841846-15841865 Msa0979250:intron 10.0%
!!! TTACAAATTTTGAAAAATAT+AGG - chr6_4:15842730-15842749 Msa0979250:intron 10.0%
!!! TACAAATTTTGAAAAATATA+GGG - chr6_4:15842731-15842750 Msa0979250:intron 10.0%
!!! TTTTTTTGAATTTTACATAT+TGG + chr6_4:15842759-15842778 None:intergenic 10.0%
!! TTATTATTACCAAATTAAAT+AGG + chr6_4:15843385-15843404 None:intergenic 10.0%
!! TTTATTAATGAAATTATCTT+TGG + chr6_4:15843485-15843504 None:intergenic 10.0%
!! TATACTATAAAATCTAAAAA+AGG - chr6_4:15843928-15843947 Msa0979250:intron 10.0%
!! TCATAAAAATTTACAATTTA+AGG + chr6_4:15844180-15844199 None:intergenic 10.0%
!! TTCTATTAAGAAAAAAATTA+AGG - chr6_4:15844491-15844510 Msa0979250:intron 10.0%
!!! TTTAAAATGCTTTAAAAAAA+AGG + chr6_4:15844753-15844772 None:intergenic 10.0%
!! TTTCAATATCATCAAAAATA+TGG - chr6_4:15841141-15841160 Msa0979250:CDS 15.0%
!! AATGTAATAAGAAAAAGAAA+AGG - chr6_4:15841775-15841794 Msa0979250:intron 15.0%
!!! ACTCAATGTTTTAATATTTT+GGG + chr6_4:15842258-15842277 None:intergenic 15.0%
!!! AACTCAATGTTTTAATATTT+TGG + chr6_4:15842259-15842278 None:intergenic 15.0%
!!! TATTTTTATTTTGGTTTGTT+TGG - chr6_4:15842590-15842609 Msa0979250:intron 15.0%
!! CAATCTTTCTAATTTAAATA+GGG - chr6_4:15842868-15842887 Msa0979250:intron 15.0%
!! AATCTTTCTAATTTAAATAG+GGG - chr6_4:15842869-15842888 Msa0979250:intron 15.0%
!!! CAAATGAGTAATAAATATTT+TGG - chr6_4:15842941-15842960 Msa0979250:intron 15.0%
!!! TTTTACCAAAAAATATTGTT+TGG - chr6_4:15843117-15843136 Msa0979250:intron 15.0%
!!! TAAATCCAAACAATATTTTT+TGG + chr6_4:15843125-15843144 None:intergenic 15.0%
!! ATTTATCATTATATACAAGT+TGG - chr6_4:15843140-15843159 Msa0979250:intron 15.0%
!!! TAATATGTTGATGAAATTAT+AGG + chr6_4:15843293-15843312 None:intergenic 15.0%
!!! AAACATTTTCCTATTTAATT+TGG - chr6_4:15843373-15843392 Msa0979250:intron 15.0%
!! TTAAAAAAAAATATATGCGA+TGG + chr6_4:15843458-15843477 None:intergenic 15.0%
!!! CGCATATATTTTTTTTTAAA+AGG - chr6_4:15843459-15843478 Msa0979250:intron 15.0%
!! AATGTAGTTAAAAATTCAAA+AGG - chr6_4:15844041-15844060 Msa0979250:intron 15.0%
!!! TTTTTCTTAATAGAAGATTA+TGG + chr6_4:15844486-15844505 None:intergenic 15.0%
!! TATTAAGAAAAAAATTAAGG+AGG - chr6_4:15844494-15844513 Msa0979250:intron 15.0%
!!! TATATAATGTAAACATTTTC+AGG - chr6_4:15845655-15845674 Msa0979250:intron 15.0%
!! TTTGAATTTGTAATTATGTT+TGG - chr6_4:15845828-15845847 Msa0979250:CDS 15.0%
!! TTTCACTTATTGAGTTTATA+AGG + chr6_4:15840724-15840743 None:intergenic 20.0%
!! TATTTATTATCATAAGATGG+AGG - chr6_4:15840818-15840837 Msa0979250:three_prime_UTR 20.0%
!! AATTTATCTTGAACTATTCA+AGG - chr6_4:15840931-15840950 Msa0979250:three_prime_UTR 20.0%
!!! TGAAAGCAAAATTTTTTATG+TGG - chr6_4:15841001-15841020 Msa0979250:three_prime_UTR 20.0%
!!! AAATTTTTTATGTGGAAAGT+TGG - chr6_4:15841009-15841028 Msa0979250:three_prime_UTR 20.0%
!! TCCATATTTAAGTAATCTTT+GGG + chr6_4:15841313-15841332 None:intergenic 20.0%
!! ATTTATTGTAGTTGTTTGAT+TGG - chr6_4:15841607-15841626 Msa0979250:intron 20.0%
!!! GCTGTAATTGAATTAAATTT+TGG + chr6_4:15841747-15841766 None:intergenic 20.0%
!! ATAAGAAAAAGAAAAGGATA+AGG - chr6_4:15841781-15841800 Msa0979250:intron 20.0%
!! TAAACATATTAGATAACTTG+TGG - chr6_4:15841877-15841896 Msa0979250:intron 20.0%
!!! TAGAAGATGTTTTAGATATT+TGG - chr6_4:15842010-15842029 Msa0979250:intron 20.0%
!! AAGATAATTAGAGTTAGTTA+AGG - chr6_4:15842163-15842182 Msa0979250:intron 20.0%
!! ATTGGATAAAAATATGAGTA+TGG + chr6_4:15842312-15842331 None:intergenic 20.0%
!! CCTATTTAAATTAGAAAGAT+TGG + chr6_4:15842870-15842889 None:intergenic 20.0%
!! CCAATCTTTCTAATTTAAAT+AGG - chr6_4:15842867-15842886 Msa0979250:intron 20.0%
!! ATATAAAATTAGATGCTGAA+TGG + chr6_4:15843257-15843276 None:intergenic 20.0%
!!! TTTGAAATTTGCAAAAGATA+CGG + chr6_4:15843954-15843973 None:intergenic 20.0%
!!! TCTGATATGTTTTGTTTTAA+GGG - chr6_4:15844117-15844136 Msa0979250:intron 20.0%
!! ATCAATATCAAAAATCACAA+TGG - chr6_4:15844352-15844371 Msa0979250:intron 20.0%
!! TCAATATCAAAAATCACAAT+GGG - chr6_4:15844353-15844372 Msa0979250:intron 20.0%
!! AAATATATCTCACTTAAAGA+TGG + chr6_4:15844459-15844478 None:intergenic 20.0%
!! TATGATGTAAATGTTAATAC+AGG - chr6_4:15845112-15845131 Msa0979250:intron 20.0%
!! ATGTTACTATAATGTGAATT+TGG + chr6_4:15845269-15845288 None:intergenic 20.0%
!!! TTTTTTTATTCTAGACTCTT+GGG - chr6_4:15845341-15845360 Msa0979250:intron 20.0%
! GAATAGTTCAAGATAAATTG+AGG + chr6_4:15840930-15840949 None:intergenic 25.0%
! TCAAAAATATGGATTTGATC+AGG - chr6_4:15841152-15841171 Msa0979250:CDS 25.0%
! CACATAAGATAAAAGGAAAA+GGG + chr6_4:15841230-15841249 None:intergenic 25.0%
! ACACATAAGATAAAAGGAAA+AGG + chr6_4:15841231-15841250 None:intergenic 25.0%
! ATATACACACCTTTATCAAT+TGG + chr6_4:15841273-15841292 None:intergenic 25.0%
!! AGGTGTGTATATTTTATCTA+TGG - chr6_4:15841281-15841300 Msa0979250:intron 25.0%
!! GGTGTGTATATTTTATCTAT+GGG - chr6_4:15841282-15841301 Msa0979250:intron 25.0%
! ATATTTAAGTAATCTTTGGG+AGG + chr6_4:15841310-15841329 None:intergenic 25.0%
! TCCCAAAGATTACTTAAATA+TGG - chr6_4:15841309-15841328 Msa0979250:intron 25.0%
! GTCCATATTTAAGTAATCTT+TGG + chr6_4:15841314-15841333 None:intergenic 25.0%
!! AATATTGGTTAGGATAGTTT+AGG - chr6_4:15841496-15841515 Msa0979250:intron 25.0%
!! ATATTGGTTAGGATAGTTTA+GGG - chr6_4:15841497-15841516 Msa0979250:intron 25.0%
! TGACCAATTAAAACTTAAGT+GGG + chr6_4:15841548-15841567 None:intergenic 25.0%
! ATTTGCATTTATCATCTGTA+TGG - chr6_4:15841957-15841976 Msa0979250:intron 25.0%
! ATCAACTCTTATACTATTGT+TGG - chr6_4:15842082-15842101 Msa0979250:intron 25.0%
! TCAACTCTTATACTATTGTT+GGG - chr6_4:15842083-15842102 Msa0979250:intron 25.0%
! TTAGTTAAGGTAGTTAGAAT+TGG - chr6_4:15842176-15842195 Msa0979250:intron 25.0%
!!! GTGATGTAGAAGTTTTATAT+TGG + chr6_4:15842330-15842349 None:intergenic 25.0%
!!! TTGTTGATAGTTAGTTTAGT+TGG - chr6_4:15842465-15842484 Msa0979250:CDS 25.0%
! AATGTGATGCATAAAAAGTA+AGG - chr6_4:15842547-15842566 Msa0979250:CDS 25.0%
! ATGTGATGCATAAAAAGTAA+GGG - chr6_4:15842548-15842567 Msa0979250:CDS 25.0%
!!! TAGGGGTATTTTAAGTATAT+TGG - chr6_4:15842886-15842905 Msa0979250:intron 25.0%
! TCACATCAAATATCAATTGT+TGG - chr6_4:15843086-15843105 Msa0979250:intron 25.0%
!! ATTTTCTTAAACTTTGTCAC+AGG + chr6_4:15843180-15843199 None:intergenic 25.0%
! GTGACAAAGTTTAAGAAAAT+TGG - chr6_4:15843180-15843199 Msa0979250:intron 25.0%
! ATGTATACACATTGAAATGA+AGG + chr6_4:15843333-15843352 None:intergenic 25.0%
!!! AAATTTTGACAACAAGTCAA+AGG - chr6_4:15843503-15843522 Msa0979250:intron 25.0%
! ATTTAACTAAATCCTCGTTT+CGG + chr6_4:15843740-15843759 None:intergenic 25.0%
! ACGAGGATTTAGTTAAATAA+TGG - chr6_4:15843742-15843761 Msa0979250:intron 25.0%
!!! TAAATAATGGACAGTTTGAT+TGG - chr6_4:15843755-15843774 Msa0979250:intron 25.0%
! TCTCTATAATAGAACTAACA+TGG - chr6_4:15843846-15843865 Msa0979250:CDS 25.0%
! CTCTATAATAGAACTAACAT+GGG - chr6_4:15843847-15843866 Msa0979250:CDS 25.0%
! TCAAGAATAAATATGCCAAT+GGG + chr6_4:15843977-15843996 None:intergenic 25.0%
! GAAAGATGTGAAATAATTAG+AGG - chr6_4:15843997-15844016 Msa0979250:intron 25.0%
!!! CTCTGATATGTTTTGTTTTA+AGG - chr6_4:15844116-15844135 Msa0979250:intron 25.0%
!!! GTTTTTGAAAACATTGCTTA+AGG + chr6_4:15844609-15844628 None:intergenic 25.0%
!! ATAAGACTTTGACTTTATTG+TGG + chr6_4:15844687-15844706 None:intergenic 25.0%
! GACATTAAATCTTCATCATA+GGG + chr6_4:15844881-15844900 None:intergenic 25.0%
! TGACATTAAATCTTCATCAT+AGG + chr6_4:15844882-15844901 None:intergenic 25.0%
! AACTATCAAATATATTCCAC+AGG - chr6_4:15844988-15845007 Msa0979250:intron 25.0%
! TAAAAAAAGGCCTAAAAGTT+TGG + chr6_4:15845057-15845076 None:intergenic 25.0%
!!! CTTTTTTTATTCTAGACTCT+TGG - chr6_4:15845340-15845359 Msa0979250:intron 25.0%
! CAAAATTGAAGTGAATGAAA+AGG + chr6_4:15845427-15845446 None:intergenic 25.0%
! AAGAAGCAGAAACATAAAAA+AGG + chr6_4:15845465-15845484 None:intergenic 25.0%
!! CATTCTAATGCAAATTTTGT+AGG + chr6_4:15845490-15845509 None:intergenic 25.0%
! TGAAAAATCGATTGCAAAAT+CGG - chr6_4:15845577-15845596 Msa0979250:intron 25.0%
!!! ATTGATGATGTTTTCTTTGA+TGG + chr6_4:15845731-15845750 None:intergenic 25.0%
! AAATATGTGTGTAGATTGTA+TGG - chr6_4:15846181-15846200 Msa0979250:five_prime_UTR 25.0%
AATAATTCCCTCATAGAAGT+TGG - chr6_4:15840777-15840796 Msa0979250:three_prime_UTR 30.0%
ATATCTTCCAACTTCTATGA+GGG + chr6_4:15840787-15840806 None:intergenic 30.0%
AATATCTTCCAACTTCTATG+AGG + chr6_4:15840788-15840807 None:intergenic 30.0%
TCTTGAACTATTCAAGGAAA+AGG - chr6_4:15840937-15840956 Msa0979250:three_prime_UTR 30.0%
GATATTGAAACCGAACATTA+GGG + chr6_4:15841131-15841150 None:intergenic 30.0%
TGATATTGAAACCGAACATT+AGG + chr6_4:15841132-15841151 None:intergenic 30.0%
GAGTACACACATAAGATAAA+AGG + chr6_4:15841237-15841256 None:intergenic 30.0%
TCCATGTTTCCAATTGATAA+AGG - chr6_4:15841261-15841280 Msa0979250:intron 30.0%
ACCTTTATCAATTGGAAACA+TGG + chr6_4:15841265-15841284 None:intergenic 30.0%
AATTACAAACTTCTCCTTAG+TGG + chr6_4:15841341-15841360 None:intergenic 30.0%
AATTATGTACTTAGCCTCTA+AGG - chr6_4:15841409-15841428 Msa0979250:intron 30.0%
AATTACAAACTTCTCCTTAG+AGG + chr6_4:15841341-15841360 None:intergenic 30.0%
GTATCCTAATGAGTGAATAT+TGG - chr6_4:15841481-15841500 Msa0979250:intron 30.0%
CTAACCAATATTCACTCATT+AGG + chr6_4:15841488-15841507 None:intergenic 30.0%
! CTAATGAGTGAATATTGGTT+AGG - chr6_4:15841486-15841505 Msa0979250:intron 30.0%
!! ACTCCCACTTAAGTTTTAAT+TGG - chr6_4:15841542-15841561 Msa0979250:CDS 30.0%
CTGACCAATTAAAACTTAAG+TGG + chr6_4:15841549-15841568 None:intergenic 30.0%
!!! CACTTAAGTTTTAATTGGTC+AGG - chr6_4:15841547-15841566 Msa0979250:intron 30.0%
AAAAAGAAAAGGATAAGGAC+AGG - chr6_4:15841786-15841805 Msa0979250:intron 30.0%
GTAGGAAAAAAAAGATTCTG+TGG + chr6_4:15841918-15841937 None:intergenic 30.0%
! TATACTATTGTTGGGTTTTG+AGG - chr6_4:15842091-15842110 Msa0979250:intron 30.0%
! CTACATTTTGTTGAGATAAC+TGG - chr6_4:15842130-15842149 Msa0979250:intron 30.0%
AAAATTAGATGCTGAATGGA+TGG + chr6_4:15843253-15843272 None:intergenic 30.0%
TGTGTATACATATCCACATT+TGG - chr6_4:15843342-15843361 Msa0979250:intron 30.0%
TTTATAATCCAGATTACACG+TGG + chr6_4:15843568-15843587 None:intergenic 30.0%
TTCTTGTAAATATGACCGAA+GGG + chr6_4:15843604-15843623 None:intergenic 30.0%
TTTCTTGTAAATATGACCGA+AGG + chr6_4:15843605-15843624 None:intergenic 30.0%
TATAATAGAACTAACATGGG+AGG - chr6_4:15843850-15843869 Msa0979250:CDS 30.0%
CAAATCAAATACTTCGTATG+TGG + chr6_4:15843906-15843925 None:intergenic 30.0%
TTTGCAAATTTCAAACCCAT+TGG - chr6_4:15843959-15843978 Msa0979250:intron 30.0%
CTCAAGAATAAATATGCCAA+TGG + chr6_4:15843978-15843997 None:intergenic 30.0%
AAAAGGATGTTATAGAGTGA+TGG - chr6_4:15844058-15844077 Msa0979250:intron 30.0%
! TGTTGAGTCTAAAATGCTTA+AGG + chr6_4:15844088-15844107 None:intergenic 30.0%
AGCTCTTCTACATATAATGT+TGG + chr6_4:15844282-15844301 None:intergenic 30.0%
! GTTTTCAAAAACGAACTAGA+TGG - chr6_4:15844617-15844636 Msa0979250:intron 30.0%
AAGAAAGAAATTCTAACCTG+TGG + chr6_4:15845007-15845026 None:intergenic 30.0%
! TGAGTGAAAACCAAACTTTT+AGG - chr6_4:15845044-15845063 Msa0979250:intron 30.0%
! GAGATAACAATACTTTTCCA+AGG + chr6_4:15845383-15845402 None:intergenic 30.0%
!! TGGAAAAGTATTGTTATCTC+TGG - chr6_4:15845383-15845402 Msa0979250:intron 30.0%
GAAGTGAATGAAAAGGTAAA+GGG + chr6_4:15845420-15845439 None:intergenic 30.0%
TGAAGTGAATGAAAAGGTAA+AGG + chr6_4:15845421-15845440 None:intergenic 30.0%
GATTTGTGAAAGTGATTGTT+TGG - chr6_4:15846034-15846053 Msa0979250:CDS 30.0%
AACCATTCTCCAAATCTTTA+AGG - chr6_4:15846109-15846128 Msa0979250:five_prime_UTR 30.0%
! ATAGTTCTCTTCTTGTTGTA+AGG + chr6_4:15846135-15846154 None:intergenic 30.0%
ACAAGAAGAGAACTATACTT+TGG - chr6_4:15846139-15846158 Msa0979250:five_prime_UTR 30.0%
!!! CACGGTGTATGCTATTTTAA+AGG + chr6_4:15840865-15840884 None:intergenic 35.0%
AAAATAGCATACACCGTGTT+TGG - chr6_4:15840867-15840886 Msa0979250:three_prime_UTR 35.0%
AAAAGCAATCCATCCAAACA+CGG + chr6_4:15840883-15840902 None:intergenic 35.0%
GAAAGTTGGAAATTGTAGTG+TGG - chr6_4:15841023-15841042 Msa0979250:three_prime_UTR 35.0%
AGCATTGTAGATGAGGTATA+AGG + chr6_4:15841094-15841113 None:intergenic 35.0%
AACATTAGGGCTAAAGTACA+AGG + chr6_4:15841118-15841137 None:intergenic 35.0%
TGTACTTTAGCCCTAATGTT+CGG - chr6_4:15841118-15841137 Msa0979250:CDS 35.0%
AAATATGGACTTAGCCACTA+AGG - chr6_4:15841324-15841343 Msa0979250:intron 35.0%
TTCTGTGGAGTTAAAAGAGT+GGG + chr6_4:15841903-15841922 None:intergenic 35.0%
ATTCTGTGGAGTTAAAAGAG+TGG + chr6_4:15841904-15841923 None:intergenic 35.0%
TCCTACAGAAAGAATCTTCT+TGG - chr6_4:15841932-15841951 Msa0979250:CDS 35.0%
ACCAAGAAGATTCTTTCTGT+AGG + chr6_4:15841936-15841955 None:intergenic 35.0%
! AAGAGTTGATTGTTCGATGA+AGG + chr6_4:15842072-15842091 None:intergenic 35.0%
ATAAAAAGTAAGGGTAGCAC+TGG - chr6_4:15842557-15842576 Msa0979250:CDS 35.0%
GTATCTCTGCGCATAAATAA+TGG - chr6_4:15842684-15842703 Msa0979250:intron 35.0%
AACTTGGAACAATAACGCTA+AGG + chr6_4:15843046-15843065 None:intergenic 35.0%
GTTCCAAGTTGCAATTTATG+AGG - chr6_4:15843056-15843075 Msa0979250:intron 35.0%
GTACCTCATAAATTGCAACT+TGG + chr6_4:15843062-15843081 None:intergenic 35.0%
!!! TTGTCACAGGTCTTTTTCAA+CGG + chr6_4:15843167-15843186 None:intergenic 35.0%
TGTTTAGTGTACACCAAATG+TGG + chr6_4:15843358-15843377 None:intergenic 35.0%
AAGAACATATATACCCCCTT+CGG - chr6_4:15843586-15843605 Msa0979250:intron 35.0%
TCTTGTAAATATGACCGAAG+GGG + chr6_4:15843603-15843622 None:intergenic 35.0%
TTGTAAATAGAACCGAAACG+AGG - chr6_4:15843725-15843744 Msa0979250:intron 35.0%
!! AAATGTTAACTTGTGCCACT+GGG - chr6_4:15844140-15844159 Msa0979250:intron 35.0%
GGTGTGTAACTAAAATGTCT+CGG + chr6_4:15844261-15844280 None:intergenic 35.0%
AACGAACTAGATGGTTCAAT+CGG - chr6_4:15844626-15844645 Msa0979250:intron 35.0%
CAATCGGTTGAATTGAGAAT+CGG - chr6_4:15844642-15844661 Msa0979250:intron 35.0%
TTGAGAATCGGTCAATTTGT+CGG - chr6_4:15844654-15844673 Msa0979250:intron 35.0%
AGTTCAACCAGAGTTGAATT+GGG + chr6_4:15844797-15844816 None:intergenic 35.0%
TAGTTCAACCAGAGTTGAAT+TGG + chr6_4:15844798-15844817 None:intergenic 35.0%
! AGTCTCATCTGTTCGATTTT+AGG - chr6_4:15844836-15844855 Msa0979250:intron 35.0%
!! CATCTGTTCGATTTTAGGTA+CGG - chr6_4:15844841-15844860 Msa0979250:intron 35.0%
AATGTGTTCCTTGATTTCTG+TGG - chr6_4:15845182-15845201 Msa0979250:intron 35.0%
TGATGCATCAAGTGATCATT+TGG + chr6_4:15845293-15845312 None:intergenic 35.0%
!! TTGCAATCGATTTTTCAACC+TGG + chr6_4:15845574-15845593 None:intergenic 35.0%
ATGTTGTCATCGAGTTTAGA+AGG + chr6_4:15845758-15845777 None:intergenic 35.0%
ATTTGAAGGAGACTTGATGA+GGG + chr6_4:15845789-15845808 None:intergenic 35.0%
! ATTCAAACATTTTCAGCCAC+CGG + chr6_4:15845815-15845834 None:intergenic 35.0%
CACACTAGCTAAAATCATAC+AGG + chr6_4:15845886-15845905 None:intergenic 35.0%
! GTGTAGATTTTCCCATGATA+AGG - chr6_4:15845903-15845922 Msa0979250:intron 35.0%
! AGATTTTCCCATGATAAGGT+TGG - chr6_4:15845907-15845926 Msa0979250:intron 35.0%
! TTTTCCCATTATGAGGTTAG+TGG - chr6_4:15845936-15845955 Msa0979250:intron 35.0%
TTTCCCATTATGAGGTTAGT+GGG - chr6_4:15845937-15845956 Msa0979250:intron 35.0%
ATCGACATTTGTCATAATCG+AGG - chr6_4:15845999-15846018 Msa0979250:CDS 35.0%
TTGGAAGCTGTGAATATCAT+TGG - chr6_4:15846053-15846072 Msa0979250:CDS 35.0%
GTTGTAAGGCCTTAAAGATT+TGG + chr6_4:15846121-15846140 None:intergenic 35.0%
GTAGATTGTATGGCTAAAGA+AGG - chr6_4:15846191-15846210 Msa0979250:five_prime_UTR 35.0%
!!! GTTTGGATGGATTGCTTTTG+TGG - chr6_4:15840884-15840903 Msa0979250:three_prime_UTR 40.0%
!!! GATGGATTGCTTTTGTGGTT+TGG - chr6_4:15840889-15840908 Msa0979250:three_prime_UTR 40.0%
AGTTGGAAATTGTAGTGTGG+TGG - chr6_4:15841026-15841045 Msa0979250:three_prime_UTR 40.0%
GTTGGAAATTGTAGTGTGGT+GGG - chr6_4:15841027-15841046 Msa0979250:three_prime_UTR 40.0%
GATGAGGTATAAGGTGTGTT+TGG + chr6_4:15841085-15841104 None:intergenic 40.0%
!! ACAAGGAAGCATTGTAGATG+AGG + chr6_4:15841101-15841120 None:intergenic 40.0%
! TGGTTAGGATAGTTTAGGGT+TGG - chr6_4:15841501-15841520 Msa0979250:intron 40.0%
AATGGATGGACGAAAAAGTG+TGG + chr6_4:15843239-15843258 None:intergenic 40.0%
AATCCAGATTACACGTGGAT+TGG + chr6_4:15843563-15843582 None:intergenic 40.0%
CTTGTAAATATGACCGAAGG+GGG + chr6_4:15843602-15843621 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCAC+TGG - chr6_4:15844139-15844158 Msa0979250:intron 40.0%
!!! CCTTTTTTTTTGTGCAGCGT+GGG - chr6_4:15844324-15844343 Msa0979250:intron 40.0%
AATTAGCCAAAGCCAGGATT+TGG + chr6_4:15844435-15844454 None:intergenic 40.0%
TGAGAATCGGTCAATTTGTC+GGG - chr6_4:15844655-15844674 Msa0979250:intron 40.0%
ATAGTCACCCAATTCAACTC+TGG - chr6_4:15844787-15844806 Msa0979250:intron 40.0%
!! CAGATGAGACTTTGAGATCA+TGG + chr6_4:15844827-15844846 None:intergenic 40.0%
TAGGTACGGTGCGAAAATAT+TGG - chr6_4:15844855-15844874 Msa0979250:intron 40.0%
! TTCATGATCAAGAGCACAGA+TGG - chr6_4:15845146-15845165 Msa0979250:intron 40.0%
! AGCACAGATGGATTTAGCAT+TGG - chr6_4:15845158-15845177 Msa0979250:intron 40.0%
AATGGCAAACTATGCTCAGA+TGG - chr6_4:15845208-15845227 Msa0979250:intron 40.0%
ACTCTTGGGTGAATTTCTCT+GGG - chr6_4:15845355-15845374 Msa0979250:intron 40.0%
TAGACATCGATGTAGTTACC+AGG - chr6_4:15845553-15845572 Msa0979250:intron 40.0%
TTTGAAGGAGACTTGATGAG+GGG + chr6_4:15845788-15845807 None:intergenic 40.0%
CATTTGAAGGAGACTTGATG+AGG + chr6_4:15845790-15845809 None:intergenic 40.0%
! TTTTCCCATGATAAGGTTGG+TGG - chr6_4:15845910-15845929 Msa0979250:intron 40.0%
! TTTCCCATGATAAGGTTGGT+GGG - chr6_4:15845911-15845930 Msa0979250:intron 40.0%
TTCCCATTATGAGGTTAGTG+GGG - chr6_4:15845938-15845957 Msa0979250:intron 40.0%
ATCCCCACTAACCTCATAAT+GGG + chr6_4:15845943-15845962 None:intergenic 40.0%
AACTGCGTGCTATACAGATA+GGG - chr6_4:15845976-15845995 Msa0979250:CDS 40.0%
GGCCTTAAAGATTTGGAGAA+TGG + chr6_4:15846114-15846133 None:intergenic 40.0%
ATAAGATGGAGGAGACAGCA+TGG - chr6_4:15840829-15840848 Msa0979250:three_prime_UTR 45.0%
TAGCATACACCGTGTTTGGA+TGG - chr6_4:15840871-15840890 Msa0979250:three_prime_UTR 45.0%
CGAAACAGCATGTGTTGAGA+AGG + chr6_4:15843019-15843038 None:intergenic 45.0%
TCTCCAATCCACGTGTAATC+TGG - chr6_4:15843557-15843576 Msa0979250:intron 45.0%
! TATGTGGCTGTAGCGTTGAA+TGG + chr6_4:15843890-15843909 None:intergenic 45.0%
!!! GCCTTTTTTTTTGTGCAGCG+TGG - chr6_4:15844323-15844342 Msa0979250:intron 45.0%
CCCACGCTGCACAAAAAAAA+AGG + chr6_4:15844327-15844346 None:intergenic 45.0%
CACAATGGGAATCATCACTG+TGG - chr6_4:15844367-15844386 Msa0979250:intron 45.0%
! ACTGTGGTGTGGATTACTGT+TGG - chr6_4:15844383-15844402 Msa0979250:intron 45.0%
TAGCATTCCCTTCCAAATCC+TGG - chr6_4:15844420-15844439 Msa0979250:intron 45.0%
GATGGAAATTAGCCAAAGCC+AGG + chr6_4:15844441-15844460 None:intergenic 45.0%
TGATCGAATCGCTTGAACTG+TGG - chr6_4:15844713-15844732 Msa0979250:intron 45.0%
CAGCACAATGCAAGTAGTTC+TGG - chr6_4:15844964-15844983 Msa0979250:intron 45.0%
GTGTTCCTTGATTTCTGTGG+AGG - chr6_4:15845185-15845204 Msa0979250:intron 45.0%
CCATTCCTCCACAGAAATCA+AGG + chr6_4:15845193-15845212 None:intergenic 45.0%
CCTTGATTTCTGTGGAGGAA+TGG - chr6_4:15845190-15845209 Msa0979250:intron 45.0%
GACTCTTGGGTGAATTTCTC+TGG - chr6_4:15845354-15845373 Msa0979250:intron 45.0%
! GTGAATTTCTCTGGGAACCT+TGG - chr6_4:15845363-15845382 Msa0979250:intron 45.0%
CAAGTCTCCTTCAAATGTGC+CGG - chr6_4:15845793-15845812 Msa0979250:CDS 45.0%
!! TTCCCATGATAAGGTTGGTG+GGG - chr6_4:15845912-15845931 Msa0979250:intron 45.0%
ATCCCCACCAACCTTATCAT+GGG + chr6_4:15845917-15845936 None:intergenic 45.0%
AATCCCCACCAACCTTATCA+TGG + chr6_4:15845918-15845937 None:intergenic 45.0%
! GTGGGGATTTTCCCATTATG+AGG - chr6_4:15845929-15845948 Msa0979250:intron 45.0%
CATCCCCACTAACCTCATAA+TGG + chr6_4:15845944-15845963 None:intergenic 45.0%
GAACTGCGTGCTATACAGAT+AGG - chr6_4:15845975-15845994 Msa0979250:CDS 45.0%
GGTAACACTAGAAGCCGAAT+GGG + chr6_4:15846219-15846238 None:intergenic 45.0%
AGGTAACACTAGAAGCCGAA+TGG + chr6_4:15846220-15846239 None:intergenic 45.0%
ATTCGGCTTCTAGTGTTACC+TGG - chr6_4:15846219-15846238 Msa0979250:five_prime_UTR 45.0%
TTCGGCTTCTAGTGTTACCT+GGG - chr6_4:15846220-15846239 Msa0979250:five_prime_UTR 45.0%
!!! GTTTTTATTTTATATAATAT+TGG + chr6_4:15840690-15840709 None:intergenic 5.0%
!! TAAAATAAAAACTAAAAATT+CGG - chr6_4:15840698-15840717 Msa0979250:three_prime_UTR 5.0%
!!! AGATATTTTTATTTTTATTT+TGG - chr6_4:15842581-15842600 Msa0979250:intron 5.0%
!! ATTCAAAAAAAAAAAAAAAA+AGG - chr6_4:15842768-15842787 Msa0979250:intron 5.0%
!! TTCAAAAAAAAAAAAAAAAA+GGG - chr6_4:15842769-15842788 Msa0979250:intron 5.0%
GCAACGTCATTTGCAGCTAC+AGG + chr6_4:15842997-15843016 None:intergenic 50.0%
!! CACGTGGATTGGAGAGACTT+TGG + chr6_4:15843552-15843571 None:intergenic 50.0%
TGCCACTGGGACACTAGTTA+AGG - chr6_4:15844153-15844172 Msa0979250:intron 50.0%
GTCCTTAACTAGTGTCCCAG+TGG + chr6_4:15844158-15844177 None:intergenic 50.0%
TGGGAATCATCACTGTGGTG+TGG - chr6_4:15844372-15844391 Msa0979250:intron 50.0%
TCCCTTCCAAATCCTGGCTT+TGG - chr6_4:15844426-15844445 Msa0979250:intron 50.0%
GCCAAAGCCAGGATTTGGAA+GGG + chr6_4:15844430-15844449 None:intergenic 50.0%
AGCCAAAGCCAGGATTTGGA+AGG + chr6_4:15844431-15844450 None:intergenic 50.0%
CGAATCGCTTGAACTGTGGT+CGG - chr6_4:15844717-15844736 Msa0979250:intron 50.0%
GGCTAAAGAAGGCTCCCATT+CGG - chr6_4:15846202-15846221 Msa0979250:five_prime_UTR 50.0%
GTCTCCTTCAAATGTGCCGG+TGG - chr6_4:15845796-15845815 Msa0979250:CDS 55.0%
TCAGCCACCGGCACATTTGA+AGG + chr6_4:15845803-15845822 None:intergenic 55.0%
GGTTAGTGGGGATGCTCTCT+TGG - chr6_4:15845950-15845969 Msa0979250:intron 55.0%
ACCTGGGACCGTCCCCCATC+AGG - chr6_4:15846236-15846255 Msa0979250:five_prime_UTR 70.0%
GGACCGTCCCCCATCAGGCA+TGG - chr6_4:15846241-15846260 Msa0979250:five_prime_UTR 70.0%
GCCTGATGGGGGACGGTCCC+AGG + chr6_4:15846240-15846259 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 15840655 15846264 15840655 ID=Msa0979250;Name=Msa0979250
chr6_4 mRNA 15840655 15846264 15840655 ID=Msa0979250-mRNA-1;Parent=Msa0979250;Name=Msa0979250-mRNA-1;_AED=0.24;_eAED=0.24;_QI=179|1|1|1|0.85|0.87|8|432|279
chr6_4 exon 15840655 15841242 15840655 ID=Msa0979250-mRNA-1:exon:5147;Parent=Msa0979250-mRNA-1
chr6_4 exon 15841515 15841564 15841515 ID=Msa0979250-mRNA-1:exon:5146;Parent=Msa0979250-mRNA-1
chr6_4 exon 15841668 15841785 15841668 ID=Msa0979250-mRNA-1:exon:5145;Parent=Msa0979250-mRNA-1
chr6_4 exon 15841910 15841952 15841910 ID=Msa0979250-mRNA-1:exon:5144;Parent=Msa0979250-mRNA-1
chr6_4 exon 15842454 15842578 15842454 ID=Msa0979250-mRNA-1:exon:5143;Parent=Msa0979250-mRNA-1
chr6_4 exon 15843842 15843931 15843842 ID=Msa0979250-mRNA-1:exon:5142;Parent=Msa0979250-mRNA-1
chr6_4 exon 15845746 15845878 15845746 ID=Msa0979250-mRNA-1:exon:5141;Parent=Msa0979250-mRNA-1
chr6_4 exon 15845961 15846264 15845961 ID=Msa0979250-mRNA-1:exon:5140;Parent=Msa0979250-mRNA-1
chr6_4 five_prime_UTR 15846086 15846264 15846086 ID=Msa0979250-mRNA-1:five_prime_utr;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15845961 15846085 15845961 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15845746 15845878 15845746 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15843842 15843931 15843842 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15842454 15842578 15842454 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15841910 15841952 15841910 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15841668 15841785 15841668 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15841515 15841564 15841515 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 CDS 15841087 15841242 15841087 ID=Msa0979250-mRNA-1:cds;Parent=Msa0979250-mRNA-1
chr6_4 three_prime_UTR 15840655 15841086 15840655 ID=Msa0979250-mRNA-1:three_prime_utr;Parent=Msa0979250-mRNA-1
Gene Sequence

>Msa0979250

ATGGAGGAGACAGCATGGAACTCTGAAACCTTTAAAATAGCATACACCGTGTTTGGATGGATTGCTTTTGTGGTTTGGTCTAGTAGTTTTTATCCTCAATTTATCTTGAACTATTCAAGGAAAAGTGTGGTGGGATTGAACTTCAATTATTTGATATTGAACAACACCAAACACACCTTATACCTCATCTACAATGCTTCCTTGTACTTTAGCCCTAATGTTCGGTTTCAATATCATCAAAAATATGGATTTGATCAGATGATACCTGTAGCTGCAAATGACGTTGCCTTCTCAACACATGCTGTTTCGTTGACCTTAGCGTTATTGTTCCAAGTTGCAATTTATGAGCGTGGGAATCAATCAATATCAAAAATCACAATGGGAATCATCACTGTGGTGTGGATTACTGTTGGAGTTTGTTTCTTCATAGCATTCCCTTCCAAATCCTGGCTTTGGCTAATTTCCATCTTTAACACAATGCAAGTAGTTCTGGCAACTATCAAATATATTCCACAGGCATTTATGAACTTCATGATCAAGAGCACAGATGGATTTAGCATTGGAAATGTGTTCCTTGATTTCTGTGGAGGAATGGCAAACTATGCTCAGATGGTTATACAATCAATTGATCAAAACTCTTGGGTGAATTTCTCTGGGAACCTTGGAAAAGTATTGTTATCTCTGGTTTGTATGTTCTTTGATCTTCTTTTCATGTGTCAACATTATGTGTTGTATCCATCAAAGAAAACATCATCAATTTCTCCTTCTAAACTCGATGACAACATCAAAGAGCCCCTCATCAAGTCTCCTTCAAATGTGCCGGTGGCTGAAAATGTTTGA
Protein sequence

>Msa0979250

MEETAWNSETFKIAYTVFGWIAFVVWSSSFYPQFILNYSRKSVVGLNFNYLILNNTKHTLYLIYNASLYFSPNVRFQYHQKYGFDQMIPVAANDVAFSTHAVSLTLALLFQVAIYERGNQSISKITMGIITVVWITVGVCFFIAFPSKSWLWLISIFNTMQVVLATIKYIPQAFMNFMIKSTDGFSIGNVFLDFCGGMANYAQMVIQSIDQNSWVNFSGNLGKVLLSLVCMFFDLLFMCQHYVLYPSKKTSSISPSKLDDNIKEPLIKSPSNVPVAENV*