AlfalfaGEDB | Msa0661890

M. sativa cultivar zhongmu-4 / Msa0661890

KEGG: -
GO: -
PFAM: PF00226.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0661890	XP_024641287.1	81.726	197	29	2	1	190	2	198	4.10e-82	252

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0661890	sp\|Q0WTI8\|DNJ72_ARATH	44.221	199	79	5	1	184	2	183	2.81e-41	140

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0661890	A0A396HBK6	81.726	197	29	2	1	190	2	198	1.96e-82	252

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006700	Msa0661890	0.820689	6.007944e-53	-8.615850e-47
Msa0008850	Msa0661890	0.834539	2.827751e-56	-8.615850e-47
Msa0015100	Msa0661890	0.800986	1.114115e-48	-8.615850e-47
Msa0047470	Msa0661890	0.810428	1.158284e-50	-8.615850e-47
Msa0049330	Msa0661890	0.818467	1.930457e-52	-8.615850e-47
Msa0053900	Msa0661890	0.800247	1.576555e-48	-8.615850e-47
Msa0055280	Msa0661890	0.809667	1.689737e-50	-8.615850e-47
Msa0060600	Msa0661890	0.805934	1.050298e-49	-8.615850e-47
Msa0064550	Msa0661890	0.801913	7.195047e-49	-8.615850e-47
Msa0068410	Msa0661890	0.807566	4.748701e-50	-8.615850e-47
Msa0101060	Msa0661890	0.824717	6.936647e-54	-8.615850e-47
Msa0105340	Msa0661890	0.800852	1.186503e-48	-8.615850e-47
Msa0109490	Msa0661890	0.815956	7.085219e-52	-8.615850e-47
Msa0111310	Msa0661890	0.810307	1.230060e-50	-8.615850e-47
Msa0617830	Msa0661890	0.851049	1.142573e-60	-8.615850e-47
Msa0620640	Msa0661890	0.818842	1.587172e-52	-8.615850e-47
Msa0622340	Msa0661890	0.802503	5.438676e-49	-8.615850e-47
Msa0628100	Msa0661890	0.814286	1.664914e-51	-8.615850e-47
Msa0630960	Msa0661890	0.810640	1.042404e-50	-8.615850e-47
Msa0639030	Msa0661890	0.809935	1.479909e-50	-8.615850e-47
Msa0640380	Msa0661890	0.828017	1.135668e-54	-8.615850e-47
Msa0656270	Msa0661890	0.859597	3.704413e-63	-8.615850e-47
Msa0656680	Msa0661890	0.850904	1.256112e-60	-8.615850e-47
Msa0661890	Msa0669200	0.811908	5.533982e-51	-8.615850e-47
Msa0661890	Msa0672120	0.813721	2.218248e-51	-8.615850e-47
Msa0661890	Msa0678820	0.810870	9.295723e-51	-8.615850e-47
Msa0661890	Msa0697140	0.806895	6.586829e-50	-8.615850e-47
Msa0661890	Msa0697600	0.816037	6.796341e-52	-8.615850e-47
Msa0661890	Msa0700070	0.855338	6.746174e-62	-8.615850e-47
Msa0661890	Msa0714340	0.826934	2.065545e-54	-8.615850e-47
Msa0661890	Msa0714380	0.827511	1.502740e-54	-8.615850e-47
Msa0661890	Msa0714600	0.845684	3.482248e-59	-8.615850e-47
Msa0661890	Msa0722930	0.837529	4.926219e-57	-8.615850e-47
Msa0661890	Msa0723140	0.835715	1.427711e-56	-8.615850e-47
Msa0661890	Msa0724050	0.831056	2.071781e-55	-8.615850e-47
Msa0661890	Msa0731710	0.809673	1.684937e-50	-8.615850e-47
Msa0661890	Msa0739610	0.810435	1.154601e-50	-8.615850e-47
Msa0661890	Msa0756310	0.838829	2.279337e-57	-8.615850e-47
Msa0661890	Msa0763880	0.821791	3.345256e-53	-8.615850e-47
Msa0661890	Msa0773290	0.808529	2.961401e-50	-8.615850e-47
Msa0661890	Msa0789270	0.827062	1.925036e-54	-8.615850e-47
Msa0661890	Msa0789280	0.829691	4.468795e-55	-8.615850e-47
Msa0661890	Msa0789290	0.830790	2.407974e-55	-8.615850e-47
Msa0661890	Msa0789300	0.832919	7.182264e-56	-8.615850e-47
Msa0661890	Msa0801360	0.812465	4.181501e-51	-8.615850e-47
Msa0661890	Msa0828570	0.805449	1.327571e-49	-8.615850e-47
Msa0661890	Msa0830720	0.805637	1.212372e-49	-8.615850e-47
Msa0661890	Msa0835730	0.832244	1.055806e-55	-8.615850e-47
Msa0661890	Msa0839830	0.806941	6.442045e-50	-8.615850e-47
Msa0661890	Msa0843280	0.806706	7.220988e-50	-8.615850e-47
Msa0661890	Msa0863760	0.801858	7.383585e-49	-8.615850e-47
Msa0661890	Msa0877890	0.950239	2.484166e-108	-8.615850e-47
Msa0661890	Msa0887070	0.813288	2.761889e-51	-8.615850e-47
Msa0661890	Msa0899700	0.818331	2.072754e-52	-8.615850e-47
Msa0661890	Msa0903730	0.803868	2.838973e-49	-8.615850e-47
Msa0661890	Msa0934830	0.802074	6.666763e-49	-8.615850e-47
Msa0661890	Msa0950410	0.801729	7.846641e-49	-8.615850e-47
Msa0661890	Msa0964650	0.806240	9.053756e-50	-8.615850e-47
Msa0661890	Msa0964680	0.814795	1.283993e-51	-8.615850e-47
Msa0661890	Msa0971860	0.814117	1.813633e-51	-8.615850e-47
Msa0661890	Msa0979250	0.804913	1.719669e-49	-8.615850e-47
Msa0661890	Msa0982270	0.811313	7.452683e-51	-8.615850e-47
Msa0661890	Msa1053990	-0.804573	2.024821e-49	-8.615850e-47
Msa0661890	Msa1054410	0.802497	5.454957e-49	-8.615850e-47
Msa0661890	Msa1080790	0.826457	2.685154e-54	-8.615850e-47
Msa0661890	Msa1102180	0.800483	1.410837e-48	-8.615850e-47
Msa0661890	Msa1118930	0.826350	2.847568e-54	-8.615850e-47
Msa0661890	Msa1141250	-0.878535	2.597008e-69	-8.615850e-47
Msa0661890	Msa1186580	0.801717	7.894145e-49	-8.615850e-47
Msa0661890	Msa1187520	0.815086	1.106925e-51	-8.615850e-47
Msa0661890	Msa1198450	0.827929	1.192390e-54	-8.615850e-47
Msa0661890	Msa1211390	0.849680	2.768257e-60	-8.615850e-47
Msa0661890	Msa1217810	0.836982	6.798967e-57	-8.615850e-47
Msa0661890	Msa1218650	0.800119	1.673482e-48	-8.615850e-47
Msa0661890	Msa1237260	0.823004	1.748904e-53	-8.615850e-47
Msa0661890	Msa1241820	0.837198	5.988797e-57	-8.615850e-47
Msa0661890	Msa1245120	-0.818835	1.592671e-52	-8.615850e-47
Msa0661890	Msa1252070	0.844177	8.882615e-59	-8.615850e-47
Msa0661890	Msa1282210	0.802759	4.816517e-49	-8.615850e-47
Msa0661890	Msa1282920	0.815110	1.093351e-51	-8.615850e-47
Msa0661890	Msa1292730	0.865037	7.897097e-65	-8.615850e-47
Msa0661890	Msa1306200	0.803583	3.252798e-49	-8.615850e-47
Msa0661890	Msa1307740	0.805553	1.262715e-49	-8.615850e-47
Msa0661890	Msa1317710	0.804141	2.491344e-49	-8.615850e-47
Msa0661890	Msa1322190	0.800743	1.249138e-48	-8.615850e-47
Msa0661890	Msa1326400	0.820419	6.929173e-53	-8.615850e-47
Msa0661890	Msa1335970	-0.832574	8.746559e-56	-8.615850e-47
Msa0661890	Msa1347620	0.805811	1.114642e-49	-8.615850e-47
Msa0661890	Msa1370630	0.811430	7.030738e-51	-8.615850e-47
Msa0661890	Msa1396090	0.817096	3.936741e-52	-8.615850e-47
Msa0661890	Msa1405470	0.810537	1.097484e-50	-8.615850e-47
Msa0661890	Msa1415270	0.813324	2.711688e-51	-8.615850e-47
Msa0661890	Msa1419110	0.800877	1.172490e-48	-8.615850e-47
Msa0661890	Msa1428440	0.809381	1.946500e-50	-8.615850e-47
Msa0661890	Msa1440180	0.804335	2.269914e-49	-8.615850e-47
Msa0661890	Msa1447560	0.810036	1.406959e-50	-8.615850e-47
Msa0661890	Msa1449740	0.805335	1.403073e-49	-8.615850e-47
Msa0661890	Msa1450020	0.806540	7.828340e-50	-8.615850e-47
Msa0148360	Msa0661890	0.809122	2.211184e-50	-8.615850e-47
Msa0158610	Msa0661890	0.824354	8.446417e-54	-8.615850e-47
Msa0164360	Msa0661890	0.824030	1.006744e-53	-8.615850e-47
Msa0169960	Msa0661890	0.804558	2.039664e-49	-8.615850e-47
Msa0178350	Msa0661890	0.833295	5.787579e-56	-8.615850e-47
Msa0188500	Msa0661890	0.813819	2.110438e-51	-8.615850e-47
Msa0198440	Msa0661890	0.853384	2.477052e-61	-8.615850e-47
Msa0200840	Msa0661890	0.822711	2.046215e-53	-8.615850e-47
Msa0200870	Msa0661890	0.837596	4.735520e-57	-8.615850e-47
Msa0203180	Msa0661890	0.802775	4.779392e-49	-8.615850e-47
Msa0216550	Msa0661890	0.817110	3.907823e-52	-8.615850e-47
Msa0223380	Msa0661890	0.802831	4.655093e-49	-8.615850e-47
Msa0225880	Msa0661890	0.808404	3.148968e-50	-8.615850e-47
Msa0366470	Msa0661890	0.814696	1.350964e-51	-8.615850e-47
Msa0389810	Msa0661890	0.806293	8.825170e-50	-8.615850e-47
Msa0401340	Msa0661890	0.814189	1.748694e-51	-8.615850e-47
Msa0411000	Msa0661890	0.818181	2.241741e-52	-8.615850e-47
Msa0419620	Msa0661890	-0.823429	1.391974e-53	-8.615850e-47
Msa0431830	Msa0661890	0.805719	1.165360e-49	-8.615850e-47
Msa0448120	Msa0661890	0.820366	7.123757e-53	-8.615850e-47
Msa0454940	Msa0661890	0.801403	9.155626e-49	-8.615850e-47
Msa0455230	Msa0661890	0.813667	2.279130e-51	-8.615850e-47
Msa0468130	Msa0661890	0.802541	5.342851e-49	-8.615850e-47
Msa0240780	Msa0661890	0.809419	1.910108e-50	-8.615850e-47
Msa0242260	Msa0661890	-0.811867	5.648847e-51	-8.615850e-47
Msa0243470	Msa0661890	0.856426	3.243546e-62	-8.615850e-47
Msa0252180	Msa0661890	0.807895	4.042876e-50	-8.615850e-47
Msa0260470	Msa0661890	0.816335	5.830585e-52	-8.615850e-47
Msa0265210	Msa0661890	0.800718	1.263441e-48	-8.615850e-47
Msa0265980	Msa0661890	-0.831383	1.722517e-55	-8.615850e-47
Msa0278670	Msa0661890	0.855084	7.997735e-62	-8.615850e-47
Msa0281940	Msa0661890	0.856295	3.543529e-62	-8.615850e-47
Msa0282170	Msa0661890	0.819778	9.711699e-53	-8.615850e-47
Msa0282500	Msa0661890	0.827345	1.647225e-54	-8.615850e-47
Msa0284870	Msa0661890	0.820738	5.853395e-53	-8.615850e-47
Msa0288240	Msa0661890	0.819793	9.639114e-53	-8.615850e-47
Msa0295850	Msa0661890	0.820462	6.771903e-53	-8.615850e-47
Msa0304110	Msa0661890	0.810707	1.008494e-50	-8.615850e-47
Msa0318070	Msa0661890	0.841510	4.548028e-58	-8.615850e-47
Msa0323630	Msa0661890	0.805046	1.612580e-49	-8.615850e-47
Msa0326670	Msa0661890	0.818950	1.499964e-52	-8.615850e-47
Msa0341190	Msa0661890	0.829230	5.782059e-55	-8.615850e-47
Msa0362430	Msa0661890	0.812291	4.564778e-51	-8.615850e-47
Msa0363460	Msa0661890	0.814907	1.213083e-51	-8.615850e-47
Msa0502910	Msa0661890	0.822857	1.892357e-53	-8.615850e-47
Msa0511720	Msa0661890	-0.837725	4.386403e-57	-8.615850e-47
Msa0516310	Msa0661890	0.815362	9.613091e-52	-8.615850e-47
Msa0530950	Msa0661890	0.818923	1.520991e-52	-8.615850e-47
Msa0540070	Msa0661890	0.816533	5.265627e-52	-8.615850e-47
Msa0543900	Msa0661890	0.835425	1.690729e-56	-8.615850e-47
Msa0545230	Msa0661890	0.802254	6.121510e-49	-8.615850e-47
Msa0576600	Msa0661890	0.826956	2.040454e-54	-8.615850e-47
Msa0577230	Msa0661890	0.802364	5.811652e-49	-8.615850e-47
Msa0599770	Msa0661890	0.812481	4.148481e-51	-8.615850e-47
Msa0600820	Msa0661890	0.819650	1.039058e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0661890	MtrunA17_Chr6g0460381	81.726	197	29	2	1	190	2	198	3.77e-86	252
Msa0661890	MtrunA17_Chr6g0460461	61.594	138	49	1	1	138	1	134	6.04e-40	135
Msa0661890	MtrunA17_Chr6g0460411	79.487	78	16	0	1	78	1	78	1.53e-38	131
Msa0661890	MtrunA17_Chr4g0040501	40.449	89	49	1	1	89	3	87	4.58e-14	69.3
Msa0661890	MtrunA17_Chr2g0333221	44.706	85	36	2	2	81	70	148	9.79e-14	68.6
Msa0661890	MtrunA17_Chr2g0282741	37.895	95	51	2	1	95	3	89	1.53e-13	67.8
Msa0661890	MtrunA17_Chr2g0282761	36.957	92	53	2	1	92	3	89	4.00e-13	66.6
Msa0661890	MtrunA17_Chr2g0324921	35.238	105	53	2	1	94	3	103	3.55e-12	63.9
Msa0661890	MtrunA17_Chr7g0263971	47.059	68	32	1	2	69	369	432	5.48e-12	63.5
Msa0661890	MtrunA17_Chr4g0021141	38.235	68	37	1	2	69	22	84	6.76e-12	60.5
Msa0661890	MtrunA17_Chr4g0061421	50.000	64	31	1	3	66	9	71	6.82e-12	63.5
Msa0661890	MtrunA17_Chr4g0006391	42.029	69	36	1	1	69	3	67	7.03e-12	63.2
Msa0661890	MtrunA17_Chr7g0242951	44.928	69	32	2	1	69	26	88	1.18e-11	62.8
Msa0661890	MtrunA17_Chr3g0123861	43.243	74	36	1	2	75	82	149	1.87e-11	62.0
Msa0661890	MtrunA17_Chr3g0138471	43.077	65	33	1	1	65	3	63	1.94e-11	61.6
Msa0661890	MtrunA17_Chr7g0271891	41.791	67	38	1	3	69	17	82	1.94e-11	59.7
Msa0661890	MtrunA17_Chr8g0344721	46.154	65	34	1	2	65	10	74	9.63e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0661890	AT2G41000.1	44.221	199	79	5	1	184	2	183	2.85e-42	140
Msa0661890	AT2G41000.2	41.489	188	78	5	1	173	2	172	1.20e-33	119
Msa0661890	AT4G28480.2	35.789	95	57	1	1	95	3	93	2.79e-14	69.7
Msa0661890	AT4G28480.1	35.789	95	57	1	1	95	3	93	3.17e-14	70.1
Msa0661890	AT5G03160.1	51.471	68	29	1	2	69	370	433	8.78e-14	69.3
Msa0661890	AT5G25530.2	37.778	90	49	2	1	90	3	85	2.09e-13	67.8
Msa0661890	AT2G20560.1	39.773	88	49	1	1	88	3	86	3.30e-13	67.0
Msa0661890	AT1G80030.4	39.560	91	49	1	2	92	75	159	3.91e-13	67.4
Msa0661890	AT1G80030.2	39.560	91	49	1	2	92	75	159	3.91e-13	67.4
Msa0661890	AT1G80030.3	39.560	91	49	1	2	92	75	159	3.91e-13	67.4
Msa0661890	AT1G80030.1	39.560	91	49	1	2	92	75	159	3.91e-13	67.4
Msa0661890	AT5G01390.3	46.970	66	31	1	1	66	3	64	6.63e-13	65.5
Msa0661890	AT5G01390.4	46.970	66	31	1	1	66	3	64	1.13e-12	64.7
Msa0661890	AT5G01390.2	32.593	135	67	4	1	118	3	130	1.38e-12	65.1
Msa0661890	AT3G08910.1	43.478	69	35	1	1	69	3	67	1.47e-12	65.1
Msa0661890	AT5G16650.1	42.029	69	35	1	2	70	11	74	1.59e-12	62.0
Msa0661890	AT5G01390.1	46.970	66	31	1	1	66	3	64	1.85e-12	65.1
Msa0661890	AT2G33735.1	44.118	68	33	1	2	69	22	84	2.63e-12	61.2
Msa0661890	AT2G33735.2	44.118	68	33	1	2	69	22	84	2.63e-12	61.2
Msa0661890	AT2G22360.1	40.659	91	47	2	2	92	86	169	3.07e-12	64.7
Msa0661890	AT5G16650.2	42.029	69	35	1	2	70	11	74	4.17e-12	62.0
Msa0661890	AT1G10350.1	32.174	115	69	3	1	115	3	108	4.43e-12	63.9
Msa0661890	AT4G39960.1	42.222	90	42	3	2	91	85	164	4.78e-12	63.9
Msa0661890	AT4G39960.2	42.222	90	42	3	2	91	85	164	4.78e-12	63.9
Msa0661890	AT1G59725.1	34.066	91	54	2	1	91	3	87	6.81e-12	63.5
Msa0661890	AT1G56300.1	40.299	67	39	1	3	69	14	79	1.76e-11	60.1
Msa0661890	AT1G56300.2	40.299	67	39	1	3	69	14	79	1.95e-11	58.9
Msa0661890	AT5G25530.1	34.694	98	49	3	1	90	3	93	7.31e-11	60.5

Find 101 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCATCAAACCACCTAAATT+TGG	0.145054	4_3:+73528579	None:intergenic
ATTCAAGTGGAGAATCTTTA+TGG	0.183653	4_3:-73529620	Msa0661890:CDS
TGCTTTCTCAATGGTGTTCA+TGG	0.193983	4_3:+73529154	None:intergenic
AGTCACGCTGTCGTAGATTT+AGG	0.208884	4_3:-73528829	Msa0661890:three_prime_UTR
CAAAATCGCATTCAAGAAAT+TGG	0.241335	4_3:-73532715	Msa0661890:CDS
ATGGATCATTACAAGGTTCT+AGG	0.255976	4_3:-73532768	Msa0661890:CDS
ATTGGATTAAATGCAGTTAA+TGG	0.257859	4_3:-73528804	Msa0661890:three_prime_UTR
GTTAGCATGTATTCCATATA+CGG	0.264525	4_3:-73528869	Msa0661890:three_prime_UTR
GATGATTGAGAATGCTTATC+TGG	0.265847	4_3:+73532678	None:intergenic
TTATGGAAGATGCAAAATTC+TGG	0.280003	4_3:-73529603	Msa0661890:CDS
ATAATGGAAGCTTTCAGTTT+TGG	0.281002	4_3:-73529028	Msa0661890:three_prime_UTR
GTATTCCATATACGGGATAT+TGG	0.286878	4_3:-73528861	Msa0661890:three_prime_UTR
CGAAACCCAATCCCAAATTT+AGG	0.300897	4_3:-73528591	Msa0661890:three_prime_UTR
CGCTGGCGGGCAGGTGGTGG+TGG	0.303507	4_3:-73532558	Msa0661890:CDS
TGAAGCGTATGAGGTTCTTA+TGG	0.315224	4_3:-73532610	Msa0661890:CDS
AGAATCCAATATCCCGTATA+TGG	0.336125	4_3:+73528856	None:intergenic
GGGAGTGGGAGTGGTTATTA+TGG	0.345269	4_3:-73532456	Msa0661890:CDS
GGGTCTGCTGGTGGTGGTGG+TGG	0.350430	4_3:-73532426	Msa0661890:CDS
GAAATTAGATTTGTGGAAGT+TGG	0.350924	4_3:-73528544	Msa0661890:three_prime_UTR
TCTCAGTATAGTTATGGATA+TGG	0.357769	4_3:-73532486	Msa0661890:CDS
AGTGGGTCTGCTGGTGGTGG+TGG	0.368130	4_3:-73532429	Msa0661890:CDS
TCATCAAACCACCTAAATTT+GGG	0.369666	4_3:+73528580	None:intergenic
ATATTACTGAGGTTGAAATC+TGG	0.370789	4_3:-73528691	Msa0661890:three_prime_UTR
TACCAATCTCAGTATAGTTA+TGG	0.371369	4_3:-73532492	Msa0661890:CDS
AACCACCTAAATTTGGGATT+GGG	0.388063	4_3:+73528586	None:intergenic
ATAACCTGATGGAAGATTCT+TGG	0.389902	4_3:-73529676	Msa0661890:intron
TTCTTGGCCAGAGCTATATT+AGG	0.391764	4_3:-73529660	Msa0661890:CDS
GTCACGCTGTCGTAGATTTA+GGG	0.397873	4_3:-73528828	Msa0661890:three_prime_UTR
AAACCACCTAAATTTGGGAT+TGG	0.399641	4_3:+73528585	None:intergenic
TTTAATTACCGCTGGCGGGC+AGG	0.400886	4_3:-73532567	Msa0661890:CDS
GTTTAAGAAATAGTGAATAA+TGG	0.402577	4_3:-73529044	Msa0661890:three_prime_UTR
TACCGCTGGCGGGCAGGTGG+TGG	0.406954	4_3:-73532561	Msa0661890:CDS
TGGCGGGCAGGTGGTGGTGG+AGG	0.410549	4_3:-73532555	Msa0661890:CDS
ATCCATAACTATACTGAGAT+TGG	0.424135	4_3:+73532490	None:intergenic
TGATCAAGAACGAATGGTTC+AGG	0.432345	4_3:-73528743	Msa0661890:three_prime_UTR
TATGGAAGATGCAAAATTCT+GGG	0.433386	4_3:-73529602	Msa0661890:CDS
GGAGGAAGTGCCGGTGCTGC+CGG	0.439766	4_3:-73532537	Msa0661890:CDS
GCAGGTTTCTGAAGCGTATG+AGG	0.452788	4_3:-73532619	Msa0661890:CDS
AGAAGTGGGTCTGCTGGTGG+TGG	0.454558	4_3:-73532432	Msa0661890:CDS
GGTGGTGGTGGAGGAAGTGC+CGG	0.464885	4_3:-73532546	Msa0661890:CDS
CTGTCGTAGATTTAGGGGAT+TGG	0.468073	4_3:-73528822	Msa0661890:three_prime_UTR
AGTCCGATCTTGATCGTGTT+CGG	0.471830	4_3:-73528666	Msa0661890:three_prime_UTR
TTACAATTGCACAAGTAACT+AGG	0.480406	4_3:+73528900	None:intergenic
ACCATTCGTTCTTGATCAGA+TGG	0.486440	4_3:+73528748	None:intergenic
AGTTATGGATATGGTAGAAG+TGG	0.488178	4_3:-73532477	Msa0661890:CDS
GATGGCTGAAATTAGATTTG+TGG	0.492102	4_3:-73528551	Msa0661890:three_prime_UTR
GGTAGAAGTGGGAGTGGGAG+TGG	0.499558	4_3:-73532465	Msa0661890:CDS
AGATTGGTAATAATAGTTAC+CGG	0.500641	4_3:+73532506	None:intergenic
AGTTAATGGTGGGTGCAGTC+AGG	0.503970	4_3:-73528790	Msa0661890:three_prime_UTR
TGCAACAATTCGATTCAAGC+AGG	0.505093	4_3:-73532637	Msa0661890:CDS
TTGCAATTTGCCTCACTAAG+TGG	0.506033	4_3:-73528937	Msa0661890:three_prime_UTR
TATGGTAGAAGTGGGTCTGC+TGG	0.512264	4_3:-73532438	Msa0661890:CDS
CTCCATCATGGATCATTACA+AGG	0.515879	4_3:-73532775	None:intergenic
GGCACTTCCACCGGCAGCAC+CGG	0.517415	4_3:+73532527	None:intergenic
TGGATCATTACAAGGTTCTA+GGG	0.519987	4_3:-73532767	Msa0661890:CDS
ACTGTTGCATGACAATCATA+TGG	0.522342	4_3:+73528513	None:intergenic
CGTCCGAACACGATCAAGAT+CGG	0.529128	4_3:+73528663	None:intergenic
TGAGTTTAATTACCGCTGGC+GGG	0.532007	4_3:-73532571	Msa0661890:CDS
CATCGCACCTAATATAGCTC+TGG	0.533032	4_3:+73529653	None:intergenic
GGTTTCGTTGCAGTCAAAAG+TGG	0.534299	4_3:+73528607	None:intergenic
CAAATTTAGGTGGTTTGATG+AGG	0.540406	4_3:-73528578	Msa0661890:three_prime_UTR
GTGGTTTGATGAGGATCTGA+TGG	0.541368	4_3:-73528569	Msa0661890:three_prime_UTR
TACAAGTATACTTTCTACAT+TGG	0.542772	4_3:+73528434	None:intergenic
AATTACCGCTGGCGGGCAGG+TGG	0.547647	4_3:-73532564	Msa0661890:CDS
GGATTAAATGCAGTTAATGG+TGG	0.547941	4_3:-73528801	Msa0661890:three_prime_UTR
CTGAGTTTAATTACCGCTGG+CGG	0.548446	4_3:-73532572	Msa0661890:CDS
TACAATTGCACAAGTAACTA+GGG	0.549039	4_3:+73528901	None:intergenic
ATAGTTACCGGCACTTCCAC+CGG	0.551666	4_3:+73532518	None:intergenic
GGTGCTGCCGGTGGAAGTGC+CGG	0.554174	4_3:-73532525	Msa0661890:CDS
AGTGGTTATTATGGTAGAAG+TGG	0.556969	4_3:-73532447	Msa0661890:CDS
TCACGCTGTCGTAGATTTAG+GGG	0.558667	4_3:-73528827	Msa0661890:three_prime_UTR
GTGCTGAGTTTAATTACCGC+TGG	0.563607	4_3:-73532575	Msa0661890:CDS
CAGAGCTATATTAGGTGCGA+TGG	0.564743	4_3:-73529652	Msa0661890:CDS
TTAGCATGTATTCCATATAC+GGG	0.567478	4_3:-73528868	Msa0661890:three_prime_UTR
ATGGTTGTTGTTGATTCAAG+TGG	0.568671	4_3:-73529633	Msa0661890:CDS
GGATATGGTAGAAGTGGGAG+TGG	0.570275	4_3:-73532471	Msa0661890:CDS
ATGAGGTTCTTATGGATGAT+CGG	0.570550	4_3:-73532602	Msa0661890:CDS
GAGAGCAGATAACTGAATCA+AGG	0.571592	4_3:+73529098	None:intergenic
ATTGCACAAGTAACTAGGGA+AGG	0.574247	4_3:+73528905	None:intergenic
GGAAGTGCCGGTGCTGCCGG+TGG	0.574627	4_3:-73532534	Msa0661890:CDS
GTGGTTATTATGGTAGAAGT+GGG	0.575671	4_3:-73532446	Msa0661890:CDS
GTTTCGTTGCAGTCAAAAGT+GGG	0.577550	4_3:+73528608	None:intergenic
GTTATGGATATGGTAGAAGT+GGG	0.577613	4_3:-73532476	Msa0661890:CDS
GGTAGAAGTGGGTCTGCTGG+TGG	0.582664	4_3:-73532435	Msa0661890:CDS
TTCTTGATCAGATGGTTCAG+AGG	0.589867	4_3:+73528756	None:intergenic
AACCCAATCCCAAATTTAGG+TGG	0.593664	4_3:-73528588	Msa0661890:three_prime_UTR
ACCATCTGATCAAGAACGAA+TGG	0.594416	4_3:-73528749	Msa0661890:three_prime_UTR
CACCACCACCTGCCCGCCAG+CGG	0.599864	4_3:+73532559	None:intergenic
GGAAGAGAGACCACTTAGTG+AGG	0.603834	4_3:+73528927	None:intergenic
ATGGAAGATGCAAAATTCTG+GGG	0.612791	4_3:-73529601	Msa0661890:intron
CATTCGAGTGGCAAGTGAAG+CGG	0.614106	4_3:+73529076	None:intergenic
GGGTGTAGTCATCATGCAGT+CGG	0.626825	4_3:+73528628	None:intergenic
CGATCTTGATCGTGTTCGGA+CGG	0.628210	4_3:-73528662	Msa0661890:three_prime_UTR
TGATTGTCATGCAACAGTCG+AGG	0.633986	4_3:-73528508	Msa0661890:three_prime_UTR
GCAAATTGCAAGAGACAACA+AGG	0.635009	4_3:+73528949	None:intergenic
TCAGCAGTACAAGTACAAGT+AGG	0.639153	4_3:+73528360	None:intergenic
GATTAAATGCAGTTAATGGT+GGG	0.641786	4_3:-73528800	Msa0661890:three_prime_UTR
TTGCACAAGTAACTAGGGAA+GGG	0.651100	4_3:+73528906	None:intergenic
GATATGGTAGAAGTGGGAGT+GGG	0.662980	4_3:-73532470	Msa0661890:CDS
AACGTGAAGAAGCATTCGAG+TGG	0.683317	4_3:+73529064	None:intergenic
GCATGGATATAGTATATGTG+CGG	0.738124	4_3:-73528996	Msa0661890:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTATAAATACTGATTTT+TGG	-	chr4_3:73528924-73528943	Msa0661890:three_prime_UTR	10.0%
!!!	TTTTATAAATACTGATTTTT+GGG	-	chr4_3:73528925-73528944	Msa0661890:three_prime_UTR	10.0%
!!	TTTAGTAAAAATGTTATATT+TGG	+	chr4_3:73529935-73529954	None:intergenic	10.0%
!!!	AATTATTGACTAATTAATTT+GGG	-	chr4_3:73530022-73530041	Msa0661890:intron	10.0%
!!!	TTTTTTATTTAATATTACTG+AGG	-	chr4_3:73532394-73532413	Msa0661890:CDS	10.0%
!!!	ATTTTTACTAAAGATCAAAA+TGG	-	chr4_3:73529943-73529962	Msa0661890:intron	15.0%
!!!	GAATTATTGACTAATTAATT+TGG	-	chr4_3:73530021-73530040	Msa0661890:intron	15.0%
!!!	TCATATCTCATTTAATTTAA+TGG	-	chr4_3:73530124-73530143	Msa0661890:intron	15.0%
!!	AATAATATTACAAAAGTGAA+AGG	+	chr4_3:73531895-73531914	None:intergenic	15.0%
!!!	ATAAATTTGGGGTTTTTATT+CGG	-	chr4_3:73528704-73528723	Msa0661890:three_prime_UTR	20.0%
!!!	TATCTCATTTAATTTAATGG+TGG	-	chr4_3:73530127-73530146	Msa0661890:intron	20.0%
!!!	TTTTACAAGATTTTTGTTCT+TGG	-	chr4_3:73530496-73530515	Msa0661890:intron	20.0%
!!	ATTTGAGCATCAATAATTTA+AGG	+	chr4_3:73531336-73531355	None:intergenic	20.0%
!!	TATCATTGAGAATAAACAAA+AGG	+	chr4_3:73531639-73531658	None:intergenic	20.0%
!!	GTTTAAGAAATAGTGAATAA+TGG	-	chr4_3:73532052-73532071	Msa0661890:intron	20.0%
!!	AATTGTTGCATTTTCTCTAA+CGG	+	chr4_3:73528449-73528468	None:intergenic	25.0%
!!	AGATTGGTAATAATAGTTAC+CGG	+	chr4_3:73528593-73528612	None:intergenic	25.0%
!!	TGTATTAGCATAAACTTGTT+TGG	-	chr4_3:73529079-73529098	Msa0661890:three_prime_UTR	25.0%
!	AGAACTTATGATATGTTCAT+GGG	-	chr4_3:73529162-73529181	Msa0661890:CDS	25.0%
!	AATAAGATGTTTATCCAAAC+AGG	-	chr4_3:73529342-73529361	Msa0661890:intron	25.0%
!	ATAAGATGTTTATCCAAACA+GGG	-	chr4_3:73529343-73529362	Msa0661890:intron	25.0%
!	ACTTATGAAAGCTTATAACA+TGG	+	chr4_3:73529416-73529435	None:intergenic	25.0%
!!!	TAAGTTTTATGAGACTGTTT+AGG	+	chr4_3:73529442-73529461	None:intergenic	25.0%
!!!	ACTGAAGTGTCTTTTAATTT+GGG	-	chr4_3:73529701-73529720	Msa0661890:intron	25.0%
!	TAAAGATCAAAATGGAAAAC+AGG	-	chr4_3:73529951-73529970	Msa0661890:intron	25.0%
!	AAAGATCAAAATGGAAAACA+GGG	-	chr4_3:73529952-73529971	Msa0661890:intron	25.0%
!	TTCAGAATCATATGCATATT+TGG	-	chr4_3:73530322-73530341	Msa0661890:intron	25.0%
!	AAAAATCTTGTAAAATCGTC+AGG	+	chr4_3:73530491-73530510	None:intergenic	25.0%
!	TGCAATATCAAAATGAAACT+GGG	+	chr4_3:73530786-73530805	None:intergenic	25.0%
!	ATGCAATATCAAAATGAAAC+TGG	+	chr4_3:73530787-73530806	None:intergenic	25.0%
!	AACCAAATTTAAATGAGAAC+AGG	-	chr4_3:73531062-73531081	Msa0661890:intron	25.0%
!	AACCTGTTCTCATTTAAATT+TGG	+	chr4_3:73531067-73531086	None:intergenic	25.0%
!	TTATTGTGAAGATGATAGAA+CGG	+	chr4_3:73531134-73531153	None:intergenic	25.0%
!!	ATATTTTTCTGATAACCTGA+TGG	-	chr4_3:73531409-73531428	Msa0661890:intron	25.0%
!	CAACTCAAAATTGAAACAAA+GGG	+	chr4_3:73531591-73531610	None:intergenic	25.0%
!	TCAACTCAAAATTGAAACAA+AGG	+	chr4_3:73531592-73531611	None:intergenic	25.0%
!!!	AATTTTGAGTTGATATCAGT+TGG	-	chr4_3:73531599-73531618	Msa0661890:intron	25.0%
!	CTGAAAAATATAATCATCTG+CGG	+	chr4_3:73531738-73531757	None:intergenic	25.0%
!	AGAAAGAAAAACTGTCAATA+TGG	+	chr4_3:73531776-73531795	None:intergenic	25.0%
!	ATTGGATTAAATGCAGTTAA+TGG	-	chr4_3:73532292-73532311	Msa0661890:intron	25.0%
!	TACAAGTATACTTTCTACAT+TGG	+	chr4_3:73532665-73532684	None:intergenic	25.0%
	CAAAATCGCATTCAAGAAAT+TGG	-	chr4_3:73528381-73528400	Msa0661890:three_prime_UTR	30.0%
	TACCAATCTCAGTATAGTTA+TGG	-	chr4_3:73528604-73528623	Msa0661890:three_prime_UTR	30.0%
	ATCCATAACTATACTGAGAT+TGG	+	chr4_3:73528609-73528628	None:intergenic	30.0%
	TCTCAGTATAGTTATGGATA+TGG	-	chr4_3:73528610-73528629	Msa0661890:three_prime_UTR	30.0%
!	GGTTTTTATTCGGATTTTGA+CGG	-	chr4_3:73528714-73528733	Msa0661890:three_prime_UTR	30.0%
!!	TTTTTGGGAAGATTTGTGTT+TGG	-	chr4_3:73528940-73528959	Msa0661890:three_prime_UTR	30.0%
	AATTTAACTGAGACCCTATT+TGG	-	chr4_3:73529013-73529032	Msa0661890:three_prime_UTR	30.0%
	GAGAACTTATGATATGTTCA+TGG	-	chr4_3:73529161-73529180	Msa0661890:CDS	30.0%
	CAGTCTCATAAAACTTAGAT+AGG	-	chr4_3:73529445-73529464	Msa0661890:intron	30.0%
	TTTCAAAACAGACAATACCT+TGG	-	chr4_3:73529515-73529534	Msa0661890:intron	30.0%
	TTCAAAACAGACAATACCTT+GGG	-	chr4_3:73529516-73529535	Msa0661890:intron	30.0%
	ATTTGAACATTGACACTAGA+AGG	-	chr4_3:73529561-73529580	Msa0661890:intron	30.0%
!!	CACTGAAGTGTCTTTTAATT+TGG	-	chr4_3:73529700-73529719	Msa0661890:intron	30.0%
	TGGACAATATCTCATAAAAG+TGG	-	chr4_3:73529816-73529835	Msa0661890:intron	30.0%
!!	GAAGTCTTTCGTTTTATTCT+TGG	-	chr4_3:73529849-73529868	Msa0661890:intron	30.0%
!	TGCTATCTTTTCATGAATGT+TGG	-	chr4_3:73529899-73529918	Msa0661890:intron	30.0%
	AAGATCAAAATGGAAAACAG+GGG	-	chr4_3:73529953-73529972	Msa0661890:intron	30.0%
	TCAATAATTCAAACTCATGC+TGG	+	chr4_3:73530011-73530030	None:intergenic	30.0%
!	ACAAATACCATTTTCACCAT+TGG	-	chr4_3:73530087-73530106	Msa0661890:intron	30.0%
	TATTGATCCAATGGTGAAAA+TGG	+	chr4_3:73530097-73530116	None:intergenic	30.0%
	GATATGACTTATTGATCCAA+TGG	+	chr4_3:73530106-73530125	None:intergenic	30.0%
	GGTGGAATTAATTTATGCAA+TGG	-	chr4_3:73530145-73530164	Msa0661890:intron	30.0%
	CAAATTAATGGCCAATTCTA+TGG	+	chr4_3:73530212-73530231	None:intergenic	30.0%
	ACTTTCCTGATGCAAATTAA+TGG	+	chr4_3:73530224-73530243	None:intergenic	30.0%
	ATTTGCATCAGGAAAGTTAA+AGG	-	chr4_3:73530227-73530246	Msa0661890:intron	30.0%
!!	TATTAAGTTGACTACACTTG+TGG	+	chr4_3:73530260-73530279	None:intergenic	30.0%
!!	TAGCTTTAAAGATCAGTCTT+GGG	+	chr4_3:73530746-73530765	None:intergenic	30.0%
!	TGCATGGACTATTTACATTA+TGG	-	chr4_3:73530928-73530947	Msa0661890:intron	30.0%
!	GCATGGACTATTTACATTAT+GGG	-	chr4_3:73530929-73530948	Msa0661890:intron	30.0%
!	ACATTCAATGATTTCGCTTT+TGG	+	chr4_3:73530983-73531002	None:intergenic	30.0%
	TGCAAATATTGAGATACTTC+AGG	-	chr4_3:73531015-73531034	Msa0661890:intron	30.0%
	AAATATGTCACACTAATGCA+GGG	+	chr4_3:73531233-73531252	None:intergenic	30.0%
	AAAATATGTCACACTAATGC+AGG	+	chr4_3:73531234-73531253	None:intergenic	30.0%
	ATTCAAGTGGAGAATCTTTA+TGG	-	chr4_3:73531476-73531495	Msa0661890:intron	30.0%
	TTATGGAAGATGCAAAATTC+TGG	-	chr4_3:73531493-73531512	Msa0661890:intron	30.0%
	TATGGAAGATGCAAAATTCT+GGG	-	chr4_3:73531494-73531513	Msa0661890:intron	30.0%
	GCTGCACATAAAATTAACAT+AGG	+	chr4_3:73531855-73531874	None:intergenic	30.0%
!	ATACACTTTTGCTTTCTCAA+TGG	+	chr4_3:73531954-73531973	None:intergenic	30.0%
!!	ATAATGGAAGCTTTCAGTTT+TGG	-	chr4_3:73532068-73532087	Msa0661890:intron	30.0%
!	TAATGGAAGCTTTCAGTTTT+GGG	-	chr4_3:73532069-73532088	Msa0661890:intron	30.0%
	TACAATTGCACAAGTAACTA+GGG	+	chr4_3:73532198-73532217	None:intergenic	30.0%
	TTACAATTGCACAAGTAACT+AGG	+	chr4_3:73532199-73532218	None:intergenic	30.0%
	GTTAGCATGTATTCCATATA+CGG	-	chr4_3:73532227-73532246	Msa0661890:intron	30.0%
	TTAGCATGTATTCCATATAC+GGG	-	chr4_3:73532228-73532247	Msa0661890:intron	30.0%
	GATTAAATGCAGTTAATGGT+GGG	-	chr4_3:73532296-73532315	Msa0661890:intron	30.0%
	ATATTACTGAGGTTGAAATC+TGG	-	chr4_3:73532405-73532424	Msa0661890:CDS	30.0%
	TCATCAAACCACCTAAATTT+GGG	+	chr4_3:73532519-73532538	None:intergenic	30.0%
	GAAATTAGATTTGTGGAAGT+TGG	-	chr4_3:73532552-73532571	Msa0661890:CDS	30.0%
	ATGGATCATTACAAGGTTCT+AGG	-	chr4_3:73528328-73528347	Msa0661890:three_prime_UTR	35.0%
	TGGATCATTACAAGGTTCTA+GGG	-	chr4_3:73528329-73528348	Msa0661890:three_prime_UTR	35.0%
	GATGATTGAGAATGCTTATC+TGG	+	chr4_3:73528421-73528440	None:intergenic	35.0%
	ATGAGGTTCTTATGGATGAT+CGG	-	chr4_3:73528494-73528513	Msa0661890:three_prime_UTR	35.0%
	AGTTATGGATATGGTAGAAG+TGG	-	chr4_3:73528619-73528638	Msa0661890:three_prime_UTR	35.0%
	GTTATGGATATGGTAGAAGT+GGG	-	chr4_3:73528620-73528639	Msa0661890:three_prime_UTR	35.0%
	AGTGGTTATTATGGTAGAAG+TGG	-	chr4_3:73528649-73528668	Msa0661890:three_prime_UTR	35.0%
	GTGGTTATTATGGTAGAAGT+GGG	-	chr4_3:73528650-73528669	Msa0661890:three_prime_UTR	35.0%
!!!	GTGGTTTTGGGGATAAATTT+GGG	-	chr4_3:73528692-73528711	Msa0661890:three_prime_UTR	35.0%
!!!	TGGTTTTGGGGATAAATTTG+GGG	-	chr4_3:73528693-73528712	Msa0661890:three_prime_UTR	35.0%
	CTCACTGTATTTGATTCACT+AGG	-	chr4_3:73528986-73529005	Msa0661890:three_prime_UTR	35.0%
	TGAGACCCTATTTGGATAAA+CGG	-	chr4_3:73529021-73529040	Msa0661890:three_prime_UTR	35.0%
	ATAGGCCGTTTATCCAAATA+GGG	+	chr4_3:73529029-73529048	None:intergenic	35.0%
	TATAGGCCGTTTATCCAAAT+AGG	+	chr4_3:73529030-73529049	None:intergenic	35.0%
	TTCACAAGTCCTCCAATATA+TGG	+	chr4_3:73529369-73529388	None:intergenic	35.0%
	TCGATCCAACAAAATTGTGA+GGG	-	chr4_3:73529482-73529501	Msa0661890:intron	35.0%
	AAAGACACTTCAGTGAATTG+AGG	+	chr4_3:73529695-73529714	None:intergenic	35.0%
	TTAGGTGAAATGTGTATCAG+TGG	+	chr4_3:73529761-73529780	None:intergenic	35.0%
	TGCTCGCATATGATTTAACT+TGG	-	chr4_3:73529796-73529815	Msa0661890:intron	35.0%
!!	GTCTTTCGTTTTATTCTTGG+TGG	-	chr4_3:73529852-73529871	Msa0661890:intron	35.0%
	GTGAAAATGGTATTTGTGCA+TGG	+	chr4_3:73530084-73530103	None:intergenic	35.0%
!!	ATTGGCCATTAATTTGCATC+AGG	-	chr4_3:73530216-73530235	Msa0661890:intron	35.0%
	TGTTCCATTCTCAAACATGT+TGG	-	chr4_3:73530294-73530313	Msa0661890:intron	35.0%
	AAAGCGAAGACTTAAAGACT+GGG	+	chr4_3:73530369-73530388	None:intergenic	35.0%
	TTATTATTGTGAGGGAAGTG+AGG	+	chr4_3:73530468-73530487	None:intergenic	35.0%
	TCGTCAGGTTATTATTGTGA+GGG	+	chr4_3:73530476-73530495	None:intergenic	35.0%
	ATCGTCAGGTTATTATTGTG+AGG	+	chr4_3:73530477-73530496	None:intergenic	35.0%
!	ACTGTATAGACGTTGACTAA+AGG	+	chr4_3:73530556-73530575	None:intergenic	35.0%
!	TTTTTCTCCATAGTTCTCCA+TGG	+	chr4_3:73530594-73530613	None:intergenic	35.0%
!!	CTAGCTTTAAAGATCAGTCT+TGG	+	chr4_3:73530747-73530766	None:intergenic	35.0%
	AATTCCGACATATTTGACCA+TGG	+	chr4_3:73530865-73530884	None:intergenic	35.0%
!	GGTCAAATATGTCGGAATTT+TGG	-	chr4_3:73530866-73530885	Msa0661890:intron	35.0%
	ATGAGACTCTCTATCATGAT+CGG	+	chr4_3:73531179-73531198	None:intergenic	35.0%
!!	AGTGGTGGGTATAGTAAATA+TGG	+	chr4_3:73531299-73531318	None:intergenic	35.0%
	ATATTTACTATACCCACCAC+TGG	-	chr4_3:73531298-73531317	Msa0661890:intron	35.0%
	ATAACCTGATGGAAGATTCT+TGG	-	chr4_3:73531420-73531439	Msa0661890:intron	35.0%
!!	ATGGTTGTTGTTGATTCAAG+TGG	-	chr4_3:73531463-73531482	Msa0661890:intron	35.0%
	ATGGAAGATGCAAAATTCTG+GGG	-	chr4_3:73531495-73531514	Msa0661890:intron	35.0%
!!!	AAAATTCTGGGGTAAGCTTT+TGG	-	chr4_3:73531506-73531525	Msa0661890:intron	35.0%
!	ATCAGTTGGTTCATATGTAC+TGG	-	chr4_3:73531613-73531632	Msa0661890:intron	35.0%
	TGTTTCATCGTTTCTTGTCA+TGG	-	chr4_3:73531703-73531722	Msa0661890:intron	35.0%
!	AATGGAAGCTTTCAGTTTTG+GGG	-	chr4_3:73532070-73532089	Msa0661890:intron	35.0%
	GCATGGATATAGTATATGTG+CGG	-	chr4_3:73532100-73532119	Msa0661890:intron	35.0%
	GTATTCCATATACGGGATAT+TGG	-	chr4_3:73532235-73532254	Msa0661890:intron	35.0%
	AGAATCCAATATCCCGTATA+TGG	+	chr4_3:73532243-73532262	None:intergenic	35.0%
	GGATTAAATGCAGTTAATGG+TGG	-	chr4_3:73532295-73532314	Msa0661890:intron	35.0%
!	AACCACCTAAATTTGGGATT+GGG	+	chr4_3:73532513-73532532	None:intergenic	35.0%
!	AAACCACCTAAATTTGGGAT+TGG	+	chr4_3:73532514-73532533	None:intergenic	35.0%
	CTCATCAAACCACCTAAATT+TGG	+	chr4_3:73532520-73532539	None:intergenic	35.0%
	CAAATTTAGGTGGTTTGATG+AGG	-	chr4_3:73532518-73532537	Msa0661890:CDS	35.0%
	GATGGCTGAAATTAGATTTG+TGG	-	chr4_3:73532545-73532564	Msa0661890:CDS	35.0%
	ACTGTTGCATGACAATCATA+TGG	+	chr4_3:73532586-73532605	None:intergenic	35.0%
	TGCAACAATTCGATTCAAGC+AGG	-	chr4_3:73528459-73528478	Msa0661890:three_prime_UTR	40.0%
	TGAAGCGTATGAGGTTCTTA+TGG	-	chr4_3:73528486-73528505	Msa0661890:three_prime_UTR	40.0%
!!!	GGTGGTTTTGGGGATAAATT+TGG	-	chr4_3:73528691-73528710	Msa0661890:three_prime_UTR	40.0%
	AAGATTAAGAAGCGAAGACC+TGG	+	chr4_3:73528740-73528759	None:intergenic	40.0%
	AGGTCTTCGCTTCTTAATCT+TGG	-	chr4_3:73528739-73528758	Msa0661890:three_prime_UTR	40.0%
!	AAGTCTTATCCCACTAACTG+GGG	+	chr4_3:73528861-73528880	None:intergenic	40.0%
!	CAAGTCTTATCCCACTAACT+GGG	+	chr4_3:73528862-73528881	None:intergenic	40.0%
!	ACAAGTCTTATCCCACTAAC+TGG	+	chr4_3:73528863-73528882	None:intergenic	40.0%
	GGAAGATTTGTGTTTGGTAG+AGG	-	chr4_3:73528946-73528965	Msa0661890:three_prime_UTR	40.0%
!	ATGAGAAGCACACATGCTAT+AGG	+	chr4_3:73529047-73529066	None:intergenic	40.0%
	ATCCAAACAGGGCCATATAT+TGG	-	chr4_3:73529354-73529373	Msa0661890:intron	40.0%
	GTCGATCCAACAAAATTGTG+AGG	-	chr4_3:73529481-73529500	Msa0661890:intron	40.0%
	GAACATTGACACTAGAAGGA+TGG	-	chr4_3:73529565-73529584	Msa0661890:intron	40.0%
	GTGTATCAGTGGTTTGATGA+TGG	+	chr4_3:73529750-73529769	None:intergenic	40.0%
!	GCAGTCTCGATTTTGTTCTT+AGG	+	chr4_3:73529779-73529798	None:intergenic	40.0%
	TATAGCTAATACGATGCTGC+AGG	+	chr4_3:73529983-73530002	None:intergenic	40.0%
	TTGTCTCACTTGTGCATGTT+AGG	+	chr4_3:73530053-73530072	None:intergenic	40.0%
	TCTCTTGTGTGCCATAGAAT+TGG	-	chr4_3:73530198-73530217	Msa0661890:intron	40.0%
	TCCATTCTCAAACATGTTGG+TGG	-	chr4_3:73530297-73530316	Msa0661890:intron	40.0%
	ACCACCAACATGTTTGAGAA+TGG	+	chr4_3:73530301-73530320	None:intergenic	40.0%
	CAAAGCGAAGACTTAAAGAC+TGG	+	chr4_3:73530370-73530389	None:intergenic	40.0%
	TTCTCAGCGTCAAATAAGTC+TGG	-	chr4_3:73530520-73530539	Msa0661890:intron	40.0%
	GTGCAAGTTACTCTATTCCA+TGG	-	chr4_3:73530574-73530593	Msa0661890:intron	40.0%
	CTCTATTCCATGGAGAACTA+TGG	-	chr4_3:73530584-73530603	Msa0661890:intron	40.0%
	GCATCAGTGCTGTCAAATAT+CGG	-	chr4_3:73530803-73530822	Msa0661890:intron	40.0%
	TCCACCATGGTCAAATATGT+CGG	-	chr4_3:73530858-73530877	Msa0661890:intron	40.0%
	ATGCAATACAGTGTTCTCGA+TGG	+	chr4_3:73530909-73530928	None:intergenic	40.0%
	AGAACACTGTATTGCATGCA+TGG	-	chr4_3:73530912-73530931	Msa0661890:intron	40.0%
	AGAACGGATCACAATTCTTG+CGG	+	chr4_3:73531118-73531137	None:intergenic	40.0%
!!	AGTTCTTTAAAGCCAGTGGT+GGG	+	chr4_3:73531313-73531332	None:intergenic	40.0%
!!	AAGGAGTTCTTTAAAGCCAG+TGG	+	chr4_3:73531317-73531336	None:intergenic	40.0%
	TTCTTGGCCAGAGCTATATT+AGG	-	chr4_3:73531436-73531455	Msa0661890:intron	40.0%
	AACAAAGGGATCATGATGCT+GGG	+	chr4_3:73531577-73531596	None:intergenic	40.0%
	AAACAAAGGGATCATGATGC+TGG	+	chr4_3:73531578-73531597	None:intergenic	40.0%
	GTTTCTTGTCATGGATAGCA+TGG	-	chr4_3:73531712-73531731	Msa0661890:intron	40.0%
	TGCTTTCTCAATGGTGTTCA+TGG	+	chr4_3:73531945-73531964	None:intergenic	40.0%
	GAGAGCAGATAACTGAATCA+AGG	+	chr4_3:73532001-73532020	None:intergenic	40.0%
!!!	AGTTTTGGGGATTGATTGCA+TGG	-	chr4_3:73532083-73532102	Msa0661890:intron	40.0%
	GCAAATTGCAAGAGACAACA+AGG	+	chr4_3:73532150-73532169	None:intergenic	40.0%
	TTGCAATTTGCCTCACTAAG+TGG	-	chr4_3:73532159-73532178	Msa0661890:intron	40.0%
	TTGCACAAGTAACTAGGGAA+GGG	+	chr4_3:73532193-73532212	None:intergenic	40.0%
	ATTGCACAAGTAACTAGGGA+AGG	+	chr4_3:73532194-73532213	None:intergenic	40.0%
	TTCTTGATCAGATGGTTCAG+AGG	+	chr4_3:73532343-73532362	None:intergenic	40.0%
	ACCATCTGATCAAGAACGAA+TGG	-	chr4_3:73532347-73532366	Msa0661890:intron	40.0%
	ACCATTCGTTCTTGATCAGA+TGG	+	chr4_3:73532351-73532370	None:intergenic	40.0%
	TGATCAAGAACGAATGGTTC+AGG	-	chr4_3:73532353-73532372	Msa0661890:intron	40.0%
	GTTTCGTTGCAGTCAAAAGT+GGG	+	chr4_3:73532491-73532510	None:intergenic	40.0%
	CGAAACCCAATCCCAAATTT+AGG	-	chr4_3:73532505-73532524	Msa0661890:CDS	40.0%
	AACCCAATCCCAAATTTAGG+TGG	-	chr4_3:73532508-73532527	Msa0661890:CDS	40.0%
	TCAGCAGTACAAGTACAAGT+AGG	+	chr4_3:73532739-73532758	None:intergenic	40.0%
	GTGCTGAGTTTAATTACCGC+TGG	-	chr4_3:73528521-73528540	Msa0661890:three_prime_UTR	45.0%
	CTGAGTTTAATTACCGCTGG+CGG	-	chr4_3:73528524-73528543	Msa0661890:three_prime_UTR	45.0%
	TGAGTTTAATTACCGCTGGC+GGG	-	chr4_3:73528525-73528544	Msa0661890:three_prime_UTR	45.0%
	GATATGGTAGAAGTGGGAGT+GGG	-	chr4_3:73528626-73528645	Msa0661890:three_prime_UTR	45.0%
!!	TTATTCGGATTTTGACGGCC+AGG	-	chr4_3:73528719-73528738	Msa0661890:three_prime_UTR	45.0%
	CTCCAATATATGGCCCTGTT+TGG	+	chr4_3:73529359-73529378	None:intergenic	45.0%
	CAAACAGGGCCATATATTGG+AGG	-	chr4_3:73529357-73529376	Msa0661890:intron	45.0%
!	GTGAGCCCTCACAATTTTGT+TGG	+	chr4_3:73529490-73529509	None:intergenic	45.0%
	AACGATGCACATACTTCCCA+AGG	+	chr4_3:73529535-73529554	None:intergenic	45.0%
	GTTGAGCCTAAGGAGCTAAA+GGG	+	chr4_3:73529599-73529618	None:intergenic	45.0%
	AGTTGAGCCTAAGGAGCTAA+AGG	+	chr4_3:73529600-73529619	None:intergenic	45.0%
	AACTAGCAGAGTTGAGCCTA+AGG	+	chr4_3:73529609-73529628	None:intergenic	45.0%
	TTCACATTCTCTGCGAATCG+AGG	-	chr4_3:73529641-73529660	Msa0661890:CDS	45.0%
!!	ATATCGGCCATGGTGGATAT+CGG	-	chr4_3:73530819-73530838	Msa0661890:intron	45.0%
	TCCGACATATTTGACCATGG+TGG	+	chr4_3:73530862-73530881	None:intergenic	45.0%
	CAATACAGTGTTCTCGATGG+CGG	+	chr4_3:73530906-73530925	None:intergenic	45.0%
	TCACAATTCTTGCGGATGAC+CGG	+	chr4_3:73531110-73531129	None:intergenic	45.0%
!!	GAGTTCTTTAAAGCCAGTGG+TGG	+	chr4_3:73531314-73531333	None:intergenic	45.0%
	CATCGCACCTAATATAGCTC+TGG	+	chr4_3:73531446-73531465	None:intergenic	45.0%
	CAGAGCTATATTAGGTGCGA+TGG	-	chr4_3:73531444-73531463	Msa0661890:intron	45.0%
!!	AACGTGAAGAAGCATTCGAG+TGG	+	chr4_3:73532035-73532054	None:intergenic	45.0%
	AGTCACGCTGTCGTAGATTT+AGG	-	chr4_3:73532267-73532286	Msa0661890:intron	45.0%
	GTCACGCTGTCGTAGATTTA+GGG	-	chr4_3:73532268-73532287	Msa0661890:intron	45.0%
	TCACGCTGTCGTAGATTTAG+GGG	-	chr4_3:73532269-73532288	Msa0661890:intron	45.0%
	CTGTCGTAGATTTAGGGGAT+TGG	-	chr4_3:73532274-73532293	Msa0661890:intron	45.0%
	AGTCCGATCTTGATCGTGTT+CGG	-	chr4_3:73532430-73532449	Msa0661890:CDS	45.0%
	GGTTTCGTTGCAGTCAAAAG+TGG	+	chr4_3:73532492-73532511	None:intergenic	45.0%
	GTGGTTTGATGAGGATCTGA+TGG	-	chr4_3:73532527-73532546	Msa0661890:CDS	45.0%
	TGATTGTCATGCAACAGTCG+AGG	-	chr4_3:73532588-73532607	Msa0661890:CDS	45.0%
!!	GCAGGTTTCTGAAGCGTATG+AGG	-	chr4_3:73528477-73528496	Msa0661890:three_prime_UTR	50.0%
	ATAGTTACCGGCACTTCCAC+CGG	+	chr4_3:73528581-73528600	None:intergenic	50.0%
	GGATATGGTAGAAGTGGGAG+TGG	-	chr4_3:73528625-73528644	Msa0661890:three_prime_UTR	50.0%
	GGGAGTGGGAGTGGTTATTA+TGG	-	chr4_3:73528640-73528659	Msa0661890:three_prime_UTR	50.0%
	TATGGTAGAAGTGGGTCTGC+TGG	-	chr4_3:73528658-73528677	Msa0661890:three_prime_UTR	50.0%
	CTTATCCCACTAACTGGGGT+CGG	+	chr4_3:73528857-73528876	None:intergenic	50.0%
	TAAGGAGCTAAAGGGCGAGT+CGG	+	chr4_3:73529591-73529610	None:intergenic	50.0%
	TCTCTGCGAATCGAGGCTAA+AGG	-	chr4_3:73529648-73529667	Msa0661890:CDS	50.0%
	GTGCTGTCAAATATCGGCCA+TGG	-	chr4_3:73530809-73530828	Msa0661890:intron	50.0%
	CTGTCAAATATCGGCCATGG+TGG	-	chr4_3:73530812-73530831	Msa0661890:intron	50.0%
!!	TGGATATCGGTGGCGGTTTT+TGG	-	chr4_3:73530832-73530851	Msa0661890:intron	50.0%
!!!	CGGTTTTTGGCTTTCCACCA+TGG	-	chr4_3:73530845-73530864	Msa0661890:intron	50.0%
!!!	GGAATTTTGGCTCTCAGCCA+TGG	-	chr4_3:73530879-73530898	Msa0661890:intron	50.0%
	CTGGCCAAGAATCTTCCATC+AGG	+	chr4_3:73531427-73531446	None:intergenic	50.0%
	CATTCGAGTGGCAAGTGAAG+CGG	+	chr4_3:73532023-73532042	None:intergenic	50.0%
	GGAAGAGAGACCACTTAGTG+AGG	+	chr4_3:73532172-73532191	None:intergenic	50.0%
!!	AGTTAATGGTGGGTGCAGTC+AGG	-	chr4_3:73532306-73532325	Msa0661890:intron	50.0%
	CGTCCGAACACGATCAAGAT+CGG	+	chr4_3:73532436-73532455	None:intergenic	50.0%
	CGATCTTGATCGTGTTCGGA+CGG	-	chr4_3:73532434-73532453	Msa0661890:CDS	50.0%
	GGGTGTAGTCATCATGCAGT+CGG	+	chr4_3:73532471-73532490	None:intergenic	50.0%
!	TTTAATTACCGCTGGCGGGC+AGG	-	chr4_3:73528529-73528548	Msa0661890:three_prime_UTR	55.0%
!!!	GTGGTGGTGGTGGTGGTTTT+GGG	-	chr4_3:73528680-73528699	Msa0661890:three_prime_UTR	55.0%
!!!	TGGTGGTGGTGGTGGTTTTG+GGG	-	chr4_3:73528681-73528700	Msa0661890:three_prime_UTR	55.0%
	ACTAACTGGGGTCGGCTACA+TGG	+	chr4_3:73528849-73528868	None:intergenic	55.0%
	ATGTAGCCGACCCCAGTTAG+TGG	-	chr4_3:73528848-73528867	Msa0661890:three_prime_UTR	55.0%
	TGTAGCCGACCCCAGTTAGT+GGG	-	chr4_3:73528849-73528868	Msa0661890:three_prime_UTR	55.0%
!	GACTCGCCCTTTAGCTCCTT+AGG	-	chr4_3:73529590-73529609	Msa0661890:intron	55.0%
	TGTGAGGGAAGTGAGGCAGA+CGG	+	chr4_3:73530461-73530480	None:intergenic	55.0%
	GCAGCATCACATTGCACCAC+CGG	-	chr4_3:73531088-73531107	Msa0661890:intron	55.0%
	CAATTCTTGCGGATGACCGG+TGG	+	chr4_3:73531107-73531126	None:intergenic	55.0%
	GGGATCATGATGCTGGGATG+TGG	+	chr4_3:73531571-73531590	None:intergenic	55.0%
	GGTAGAAGTGGGAGTGGGAG+TGG	-	chr4_3:73528631-73528650	Msa0661890:three_prime_UTR	60.0%
	GGTAGAAGTGGGTCTGCTGG+TGG	-	chr4_3:73528661-73528680	Msa0661890:three_prime_UTR	60.0%
	AGAAGTGGGTCTGCTGGTGG+TGG	-	chr4_3:73528664-73528683	Msa0661890:three_prime_UTR	60.0%
!!!	GGTGGTGGTGGTGGTGGTTT+TGG	-	chr4_3:73528679-73528698	Msa0661890:three_prime_UTR	60.0%
	GTGAGGGAAGTGAGGCAGAC+GGG	+	chr4_3:73530460-73530479	None:intergenic	60.0%
!!	TCGGCCATGGTGGATATCGG+TGG	-	chr4_3:73530822-73530841	Msa0661890:intron	60.0%
!!	GCCATGGTGGATATCGGTGG+CGG	-	chr4_3:73530825-73530844	Msa0661890:intron	60.0%
	ACCGCCACCGATATCCACCA+TGG	+	chr4_3:73530829-73530848	None:intergenic	60.0%
!!	GTGTTCTCGATGGCGGACCA+TGG	+	chr4_3:73530899-73530918	None:intergenic	60.0%
!	AATTACCGCTGGCGGGCAGG+TGG	-	chr4_3:73528532-73528551	Msa0661890:three_prime_UTR	65.0%
!!	GGTGGTGGTGGAGGAAGTGC+CGG	-	chr4_3:73528550-73528569	Msa0661890:three_prime_UTR	65.0%
!!	AGTGGGTCTGCTGGTGGTGG+TGG	-	chr4_3:73528667-73528686	Msa0661890:three_prime_UTR	65.0%
!!	TCTGCTGGTGGTGGTGGTGG+TGG	-	chr4_3:73528673-73528692	Msa0661890:three_prime_UTR	65.0%
!!	GGAGGAAGTGCCGGTGCTGC+CGG	-	chr4_3:73528559-73528578	Msa0661890:three_prime_UTR	70.0%
	GGCACTTCCACCGGCAGCAC+CGG	+	chr4_3:73528572-73528591	None:intergenic	70.0%
!	GGTGCTGCCGGTGGAAGTGC+CGG	-	chr4_3:73528571-73528590	Msa0661890:three_prime_UTR	70.0%
!!	GGGTCTGCTGGTGGTGGTGG+TGG	-	chr4_3:73528670-73528689	Msa0661890:three_prime_UTR	70.0%
!	TACCGCTGGCGGGCAGGTGG+TGG	-	chr4_3:73528535-73528554	Msa0661890:three_prime_UTR	75.0%
	CACCACCACCTGCCCGCCAG+CGG	+	chr4_3:73528540-73528559	None:intergenic	75.0%
!!	TGGCGGGCAGGTGGTGGTGG+AGG	-	chr4_3:73528541-73528560	Msa0661890:three_prime_UTR	75.0%
!!	GGAAGTGCCGGTGCTGCCGG+TGG	-	chr4_3:73528562-73528581	Msa0661890:three_prime_UTR	75.0%
!!	CGCTGGCGGGCAGGTGGTGG+TGG	-	chr4_3:73528538-73528557	Msa0661890:three_prime_UTR	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	73528328	73532790	73528328	ID=Msa0661890;Name=Msa0661890
chr4_3	mRNA	73528328	73532790	73528328	ID=Msa0661890-mRNA-1;Parent=Msa0661890;Name=Msa0661890-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0\|0.5\|0.33\|1\|0.5\|0.66\|3\|787\|190
chr4_3	exon	73528328	73529192	73528328	ID=Msa0661890-mRNA-1:exon:22217;Parent=Msa0661890-mRNA-1
chr4_3	exon	73529602	73529683	73529602	ID=Msa0661890-mRNA-1:exon:22216;Parent=Msa0661890-mRNA-1
chr4_3	exon	73532378	73532790	73532378	ID=Msa0661890-mRNA-1:exon:22215;Parent=Msa0661890-mRNA-1
chr4_3	CDS	73532378	73532790	73532378	ID=Msa0661890-mRNA-1:cds;Parent=Msa0661890-mRNA-1
chr4_3	CDS	73529602	73529683	73529602	ID=Msa0661890-mRNA-1:cds;Parent=Msa0661890-mRNA-1
chr4_3	CDS	73529115	73529192	73529115	ID=Msa0661890-mRNA-1:cds;Parent=Msa0661890-mRNA-1
chr4_3	three_prime_UTR	73528328	73529114	73528328	ID=Msa0661890-mRNA-1:three_prime_utr;Parent=Msa0661890-mRNA-1

Gene Sequence

>Msa0661890

ATGGATCATTACAAGGTTCTAGGGTTACACAAAACAGCATCAAAAGAAGAAATCAAAATCGCATTCAAGAAATTGGCGTTTCAATTTCATCCAGATAAGCATTCTCAATCATCTAAATCCGTTAGAGAAAATGCAACAATTCGATTCAAGCAGGTTTCTGAAGCGTATGAGGTTCTTATGGATGATCGGAAACGTGCTGAGTTTAATTACCGCTGGCGGGCAGGTGGTGGTGGAGGAAGTGCCGGTGCTGCCGGTGGAAGTGCCGGTAACTATTATTACCAATCTCAGTATAGTTATGGATATGGTAGAAGTGGGAGTGGGAGTGGTTATTATGGTAGAAGTGGGTCTGCTGGTGGTGGTGGTGGTGGTTTTGGGGATAAATTTGGGGTTTTTATTCGGATTTTGACGGCCAGATTCTTGGCCAGAGCTATATTAGGTGCGATGGTTGTTGTTGATTCAAGTGGAGAATCTTTATGGAAGATGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATGAACACCATTGAGAAAGCAAAAGTGTATAAAAAAGATAACACGAATGAACATCCTTGA

Protein sequence

>Msa0661890

MDHYKVLGLHKTASKEEIKIAFKKLAFQFHPDKHSQSSKSVRENATIRFKQVSEAYEVLMDDRKRAEFNYRWRAGGGGGSAGAAGGSAGNYYYQSQYSYGYGRSGSGSGYYGRSGSAGGGGGGFGDKFGVFIRILTARFLARAILGAMVVVDSSGESLWKMQNSGKSFEEAMNTIEKAKVYKKDNTNEHP*