AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0198440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0198440 MtrunA17_Chr2g0291781 96.278 403 13 1 1 401 1 403 0.0 797
Msa0198440 MtrunA17_Chr5g0411611 44.083 338 188 1 64 401 67 403 4.45e-107 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0198440 AT1G36320.1 65.672 335 114 1 68 401 80 414 5.42e-170 482
Msa0198440 AT4G37920.1 41.979 374 206 3 38 401 30 402 1.05e-106 321

Find 121 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTTATGTTATTATATA+TGG 0.164573 2_1:+17050547 Msa0198440:three_prime_UTR
TTGACTATTCGAATCTCTTT+TGG 0.215665 2_1:-17049824 None:intergenic
AGGTTCGAACCTGTATAAAA+AGG 0.229073 2_1:+17050875 Msa0198440:three_prime_UTR
AAAAGTTGATTGAGAAAATT+AGG 0.244374 2_1:+17046742 Msa0198440:five_prime_UTR
TAAACGGTTACTTACTTGTT+AGG 0.266740 2_1:-17046994 None:intergenic
TTAAAGGTATGTTTGGTTAG+AGG 0.276102 2_1:-17050788 None:intergenic
GTTTGAAGCAACGTAGTTAC+AGG 0.303663 2_1:-17047119 None:intergenic
TTAGAGGGGTGGAGCCTTGT+TGG 0.314409 2_1:-17050772 None:intergenic
TCAGAGACATAATGATCTTC+TGG 0.332215 2_1:+17048243 Msa0198440:CDS
GCAAAGAAGGTACCCTCATT+AGG 0.337516 2_1:+17050094 Msa0198440:CDS
CAGGTGTAAATGCATCTTTA+AGG 0.342122 2_1:-17049889 None:intergenic
ACTTGTTAGGGTTTGAAGTT+TGG 0.344170 2_1:-17046981 None:intergenic
AAACTAATCGACGAATTTAT+CGG 0.344840 2_1:-17051031 None:intergenic
TCTCTGATTATTGCAAGAAC+TGG 0.349527 2_1:-17046789 None:intergenic
GCTTTCTGTAGCACCATCAT+AGG 0.351747 2_1:-17048905 None:intergenic
AGTCAAATTAAAGGTATGTT+TGG 0.365988 2_1:-17050795 None:intergenic
ATAAAACTAAGTCAAATTAA+AGG 0.368230 2_1:-17050804 None:intergenic
CTGTAGGAAGATAGACAATT+TGG 0.372225 2_1:+17048996 Msa0198440:CDS
CTCTGATTATTGCAAGAACT+GGG 0.395224 2_1:-17046788 None:intergenic
CGATTGTAACATCAAAAGTT+AGG 0.397051 2_1:+17050392 Msa0198440:three_prime_UTR
CAGAATCGAAACTCACTTGA+TGG 0.414856 2_1:+17046823 Msa0198440:exon
AGGGCCGACAGTTGCTCCTC+AGG 0.422316 2_1:-17049869 None:intergenic
ACAACAGAGTAAGCTGAATC+AGG 0.428216 2_1:+17050347 Msa0198440:three_prime_UTR
GAGCAATGCTGTTGTAAATC+CGG 0.429390 2_1:-17050285 None:intergenic
ATCCACGTGTGAAGCTTCTC+TGG 0.430758 2_1:-17050042 None:intergenic
TAAAGGTATGTTTGGTTAGA+GGG 0.431025 2_1:-17050787 None:intergenic
TTTCCTTCAAGTTCTTCTCC+AGG 0.433509 2_1:-17049908 None:intergenic
TCCAGTGGCCATGTCTTTGA+AGG 0.438197 2_1:+17050587 Msa0198440:three_prime_UTR
CTTGGCAGCAGCCCAAGCTT+TGG 0.438406 2_1:-17049061 None:intergenic
AAAGAGACGAAGCGAGAAAA+GGG 0.440904 2_1:-17046956 None:intergenic
TGTAAAATCCTTCCTACGCT+TGG 0.442996 2_1:-17048308 None:intergenic
CAAAGAAGGTACCCTCATTA+GGG 0.443898 2_1:+17050095 Msa0198440:CDS
GAAAAGAACTGACAAAGCTT+GGG 0.448005 2_1:+17048857 Msa0198440:intron
CAAAGCTTGGGCTGCTGCCA+AGG 0.449883 2_1:+17049062 Msa0198440:CDS
ATGTCCATCAAGTGCAGATC+CGG 0.453798 2_1:+17050266 Msa0198440:three_prime_UTR
AAATCCGGATCTGCACTTGA+TGG 0.457140 2_1:-17050270 None:intergenic
AGGTGTAAATGCATCTTTAA+GGG 0.459121 2_1:-17049888 None:intergenic
TGGGAGAATTCATAATATCT+TGG 0.459633 2_1:-17048960 None:intergenic
AAACGGTTACTTACTTGTTA+GGG 0.461040 2_1:-17046993 None:intergenic
TGAAAAGAACTGACAAAGCT+TGG 0.461245 2_1:+17048856 Msa0198440:intron
GGAGTTTGTGATAAACTCAT+TGG 0.463713 2_1:+17047187 Msa0198440:CDS
GCTTATCATTTGAGCAAAGA+AGG 0.473294 2_1:+17050081 Msa0198440:CDS
CAAGTATATTCTTCGAATTG+AGG 0.483924 2_1:+17049844 Msa0198440:CDS
AAAATTGGAGATGTTAAAGA+AGG 0.485310 2_1:+17050152 Msa0198440:CDS
GATCCCTTGCTTCCCTAATG+AGG 0.485319 2_1:-17050107 None:intergenic
ATAAACCTACTCCAACTGAT+TGG 0.487355 2_1:+17047224 Msa0198440:CDS
CAAATTGTCTATCTTCCTAC+AGG 0.494659 2_1:-17048995 None:intergenic
GAAAGAGACGAAGCGAGAAA+AGG 0.495170 2_1:-17046957 None:intergenic
GAAGAAGAGATGAAAGGTGA+TGG 0.500445 2_1:-17046884 None:intergenic
TATTGATGATCACCAAAGCT+TGG 0.509925 2_1:+17049049 Msa0198440:CDS
GTAGATGAAAGCAAAATGAT+TGG 0.510508 2_1:+17047166 Msa0198440:CDS
GGAGATGTTAAAGAAGGTTG+TGG 0.513343 2_1:+17050158 Msa0198440:CDS
GCCTTCAAAGACATGGCCAC+TGG 0.514010 2_1:-17050588 None:intergenic
ACACCTGGAGAAGAACTTGA+AGG 0.515259 2_1:+17049905 Msa0198440:CDS
AAAGGTATGTTTGGTTAGAG+GGG 0.520684 2_1:-17050786 None:intergenic
TTAGACTTTGAAATTTGAGT+AGG 0.526622 2_1:+17050438 Msa0198440:three_prime_UTR
ACACATAGCTGTCAGATCCT+AGG 0.530809 2_1:+17050855 Msa0198440:three_prime_UTR
CTTCTCCAATCAGTTGGAGT+AGG 0.530886 2_1:-17047229 None:intergenic
ACAATATTATGCTTTAGAGT+AGG 0.538790 2_1:-17050228 None:intergenic
AACAACCTTCTCCAATCAGT+TGG 0.540025 2_1:-17047235 None:intergenic
GGCCATGTCTTTGAAGGCTG+AGG 0.540772 2_1:+17050593 Msa0198440:three_prime_UTR
AAGTCTTGTATAAATGAAAG+AGG 0.542381 2_1:-17049775 None:intergenic
TTCCTCAGCCTTCAAAGACA+TGG 0.544052 2_1:-17050595 None:intergenic
CTTAAAGATGCATTTACACC+TGG 0.546565 2_1:+17049890 Msa0198440:CDS
GATAGAACAAATATTACCAC+AGG 0.552332 2_1:-17050704 None:intergenic
ATTGATGATCACCAAAGCTT+GGG 0.554729 2_1:+17049050 Msa0198440:CDS
GCTGCTGTACAAGCCTATGA+TGG 0.559521 2_1:+17048892 Msa0198440:CDS
GATGAAGAAGAAGAGATGAA+AGG 0.560274 2_1:-17046890 None:intergenic
CTTTGAGCTTCCTCGCGAGA+CGG 0.562250 2_1:-17047360 None:intergenic
GTGTTTATATTTAGACACTT+CGG 0.565524 2_1:+17050315 Msa0198440:three_prime_UTR
GCAATATTGTCTCCAAGCGT+AGG 0.566012 2_1:+17048296 Msa0198440:CDS
TACCCTCATTAGGGAAGCAA+GGG 0.573700 2_1:+17050104 Msa0198440:CDS
AATTGCAGAACAACCTGAAG+AGG 0.574048 2_1:+17050740 Msa0198440:three_prime_UTR
GTACCCTCATTAGGGAAGCA+AGG 0.574896 2_1:+17050103 Msa0198440:CDS
ACAACCTGAAGAGGTAAAAG+AGG 0.577700 2_1:+17050749 Msa0198440:three_prime_UTR
GGTATGTTTGGTTAGAGGGG+TGG 0.580387 2_1:-17050783 None:intergenic
GAACTTCATGTGAAGAGGGT+GGG 0.580814 2_1:+17050185 Msa0198440:exon
TCTTCTGGATGTAATCAGAA+AGG 0.585049 2_1:+17048258 Msa0198440:CDS
AAAAGCTACTCCGTCTCGCG+AGG 0.586113 2_1:+17047350 Msa0198440:CDS
TATTGTCTCCAAGCGTAGGA+AGG 0.587624 2_1:+17048300 Msa0198440:CDS
ACAATATTGCTAATTTCAGA+CGG 0.590828 2_1:-17048283 None:intergenic
TGATTGAGAAAATTAGGCGG+AGG 0.591066 2_1:+17046748 Msa0198440:five_prime_UTR
ATCCCTTGCTTCCCTAATGA+GGG 0.592977 2_1:-17050106 None:intergenic
GCGATTGTGTCATTTGCACG+TGG 0.596481 2_1:+17050460 Msa0198440:three_prime_UTR
TGTTAAAGAAGGTTGTGGAG+AGG 0.599265 2_1:+17050163 Msa0198440:CDS
GGAACTTCATGTGAAGAGGG+TGG 0.603161 2_1:+17050184 Msa0198440:exon
CTACTCCAACTGATTGGAGA+AGG 0.606886 2_1:+17047230 Msa0198440:CDS
TTTGAAGCAACGTAGTTACA+GGG 0.611162 2_1:-17047118 None:intergenic
TTCAAACATGACAAAAGATG+AGG 0.614839 2_1:+17049086 Msa0198440:CDS
AGATAATGCTTCGAGTGATG+TGG 0.616055 2_1:+17047144 Msa0198440:CDS
CGTGGGAGTGAAATGTTACA+TGG 0.617115 2_1:+17050478 Msa0198440:three_prime_UTR
AGAGGGTGGGAAACATACTA+AGG 0.618327 2_1:+17050198 Msa0198440:three_prime_UTR
CCACACTTGATGCTGCCTGT+AGG 0.618877 2_1:+17048980 Msa0198440:CDS
TACTAAACTTAGTCTTGACC+AGG 0.618920 2_1:+17050525 Msa0198440:three_prime_UTR
AGAGGTAAAAGAGGCCAACA+AGG 0.621169 2_1:+17050758 Msa0198440:three_prime_UTR
CCTACAGGCAGCATCAAGTG+TGG 0.623280 2_1:-17048980 None:intergenic
TCTTCGAATTGAGGATCCTG+AGG 0.625034 2_1:+17049853 Msa0198440:CDS
CGATTGTGTCATTTGCACGT+GGG 0.626108 2_1:+17050461 Msa0198440:three_prime_UTR
GGTGAAGAATGGGTTGAATG+AGG 0.627714 2_1:-17046914 None:intergenic
AGAGGAACTTCATGTGAAGA+GGG 0.629889 2_1:+17050181 Msa0198440:exon
CTACAGGCAGCATCAAGTGT+GGG 0.630735 2_1:-17048979 None:intergenic
CTATGTGTGTAAATTTCAGT+TGG 0.631826 2_1:-17050840 None:intergenic
TCATTTATACAAGACTTCAG+TGG 0.634013 2_1:+17049781 Msa0198440:CDS
GAGAGGAACTTCATGTGAAG+AGG 0.635612 2_1:+17050180 Msa0198440:exon
AAAAGAACTGACAAAGCTTG+GGG 0.640924 2_1:+17048858 Msa0198440:intron
AAAAGAACTTGATTCGACAC+TGG 0.642159 2_1:+17049026 Msa0198440:CDS
CACCAGAGAAGCTTCACACG+TGG 0.643680 2_1:+17050040 Msa0198440:CDS
TGCTCTTGTGTAGATTGATG+AGG 0.644388 2_1:+17048216 Msa0198440:intron
TCTGATTATTGCAAGAACTG+GGG 0.644859 2_1:-17046787 None:intergenic
AGAACTTGAAGGAAACAATG+AGG 0.645727 2_1:+17049916 Msa0198440:CDS
GGATCCTGAGGAGCAACTGT+CGG 0.649811 2_1:+17049865 Msa0198440:CDS
AATTAGACTTGATGAAATCG+AGG 0.652822 2_1:-17051056 None:intergenic
AATATTTGTTCTATCAAACA+CGG 0.661110 2_1:+17050712 Msa0198440:three_prime_UTR
AGTAAAACAAAATTAACCTG+TGG 0.675068 2_1:+17050688 Msa0198440:three_prime_UTR
ATATAATAACATAAGAGACC+TGG 0.678828 2_1:-17050543 None:intergenic
GGGTGGGAAACATACTAAGG+TGG 0.685600 2_1:+17050201 Msa0198440:three_prime_UTR
GTAAATAGAATATATTCCAG+TGG 0.686075 2_1:+17050572 Msa0198440:three_prime_UTR
AGTTGATTGAGAAAATTAGG+CGG 0.699832 2_1:+17046745 Msa0198440:five_prime_UTR
TCTCGCGAGGAAGCTCAAAG+AGG 0.701476 2_1:+17047363 Msa0198440:CDS
GATGGAAGAGAAGAACGCAA+CGG 0.719575 2_1:-17046866 None:intergenic
TCACACGTGGATAAAGACTG+TGG 0.749282 2_1:+17050053 Msa0198440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCAAATATGAAAACA+TGG - chr2_1:17048799-17048818 None:intergenic 15.0%
!!! AAAACATTATAGGTTTTAAA+GGG - chr2_1:17048826-17048845 None:intergenic 15.0%
!!! AAAAACATTATAGGTTTTAA+AGG - chr2_1:17048827-17048846 None:intergenic 15.0%
!! CATAAAACAAAAAACATTAT+AGG - chr2_1:17048836-17048855 None:intergenic 15.0%
!! TTCTGATTTAAAAACTAAAT+AGG - chr2_1:17049731-17049750 None:intergenic 15.0%
!! AAGTCTAATAGTAAAAAAAA+GGG - chr2_1:17050426-17050445 None:intergenic 15.0%
!! AAAGTCTAATAGTAAAAAAA+AGG - chr2_1:17050427-17050446 None:intergenic 15.0%
!! ATAAAACTAAGTCAAATTAA+AGG - chr2_1:17050807-17050826 None:intergenic 15.0%
!!! AAAAGTTGATTGAGAAAATT+AGG + chr2_1:17046742-17046761 Msa0198440:five_prime_UTR 20.0%
!! ATGTTATTATCTGTCTATTT+AGG + chr2_1:17047079-17047098 Msa0198440:intron 20.0%
!! ATAACAGTTCTATATCATAA+AGG + chr2_1:17047672-17047691 Msa0198440:intron 20.0%
!! TAACAGTTCTATATCATAAA+GGG + chr2_1:17047673-17047692 Msa0198440:intron 20.0%
!! AGGCATTTATCAATAATTAA+AGG + chr2_1:17047954-17047973 Msa0198440:intron 20.0%
!! TTAATTGGAATATAAGAAAC+AGG + chr2_1:17048157-17048176 Msa0198440:intron 20.0%
!!! TCGTTTTTGAAATTTGAATT+TGG + chr2_1:17048414-17048433 Msa0198440:intron 20.0%
!! ATTCGAATATAACCATAATT+AGG + chr2_1:17048646-17048665 Msa0198440:intron 20.0%
!!! TTTTATATGTATGTATTCTG+AGG - chr2_1:17048723-17048742 None:intergenic 20.0%
!! AAAAGATGAGGTAAAATTTA+TGG + chr2_1:17049098-17049117 Msa0198440:intron 20.0%
!! GGATAAAAACATTATAGATA+AGG - chr2_1:17049351-17049370 None:intergenic 20.0%
!! ATAAGAGAGATTGAATATTT+GGG + chr2_1:17049398-17049417 Msa0198440:intron 20.0%
!! GTTAATTGAATAGTATAATG+AGG + chr2_1:17049596-17049615 Msa0198440:intron 20.0%
!! AAATCAGAACATTTATTTGT+AGG + chr2_1:17049742-17049761 Msa0198440:intron 20.0%
!! AACTTCTTAATATCTATTTC+AGG + chr2_1:17050016-17050035 Msa0198440:intron 20.0%
!! GTCTCTTATGTTATTATATA+TGG + chr2_1:17050547-17050566 Msa0198440:three_prime_UTR 20.0%
!! AATATTTGTTCTATCAAACA+CGG + chr2_1:17050712-17050731 Msa0198440:three_prime_UTR 20.0%
! TACACAATATTGACAAATAG+CGG + chr2_1:17047737-17047756 Msa0198440:intron 25.0%
!! CTTCATAATCACATTCATTT+TGG - chr2_1:17048117-17048136 None:intergenic 25.0%
! ACAATATTGCTAATTTCAGA+CGG - chr2_1:17048286-17048305 None:intergenic 25.0%
! AAAGATGCAGAAAAACAAAA+TGG + chr2_1:17048376-17048395 Msa0198440:CDS 25.0%
! CATTGGATTTATGAATTGTA+TGG + chr2_1:17048571-17048590 Msa0198440:intron 25.0%
!! TATTAAGAAGTGTGTTGAAT+TGG + chr2_1:17048768-17048787 Msa0198440:intron 25.0%
! TTAAATAGCAGTACATGTAA+AGG - chr2_1:17049139-17049158 None:intergenic 25.0%
!! GCTATTTAATTTCACGAATA+TGG + chr2_1:17049150-17049169 Msa0198440:intron 25.0%
!! ATTTAATTTCACGAATATGG+AGG + chr2_1:17049153-17049172 Msa0198440:intron 25.0%
! GATAAGAGAGATTGAATATT+TGG + chr2_1:17049397-17049416 Msa0198440:intron 25.0%
! TAAGAGAGATTGAATATTTG+GGG + chr2_1:17049399-17049418 Msa0198440:intron 25.0%
! TGTTGTCATTACAAAATATG+AGG + chr2_1:17049568-17049587 Msa0198440:intron 25.0%
! AATTGAATAGTATAATGAGG+TGG + chr2_1:17049599-17049618 Msa0198440:intron 25.0%
!! AAGTCTTGTATAAATGAAAG+AGG - chr2_1:17049778-17049797 None:intergenic 25.0%
! AAAATTGGAGATGTTAAAGA+AGG + chr2_1:17050152-17050171 Msa0198440:CDS 25.0%
!!! ACAATATTATGCTTTAGAGT+AGG - chr2_1:17050231-17050250 None:intergenic 25.0%
! GTGTTTATATTTAGACACTT+CGG + chr2_1:17050315-17050334 Msa0198440:three_prime_UTR 25.0%
!!! TTAGACTTTGAAATTTGAGT+AGG + chr2_1:17050438-17050457 Msa0198440:three_prime_UTR 25.0%
! ATATAATAACATAAGAGACC+TGG - chr2_1:17050546-17050565 None:intergenic 25.0%
! GTAAATAGAATATATTCCAG+TGG + chr2_1:17050572-17050591 Msa0198440:three_prime_UTR 25.0%
! GCACAATTGAAAAATTACAA+TGG + chr2_1:17050623-17050642 Msa0198440:three_prime_UTR 25.0%
! AGTAAAACAAAATTAACCTG+TGG + chr2_1:17050688-17050707 Msa0198440:three_prime_UTR 25.0%
!! AGTCAAATTAAAGGTATGTT+TGG - chr2_1:17050798-17050817 None:intergenic 25.0%
! AAACTAATCGACGAATTTAT+CGG - chr2_1:17051034-17051053 None:intergenic 25.0%
AGTTGATTGAGAAAATTAGG+CGG + chr2_1:17046745-17046764 Msa0198440:five_prime_UTR 30.0%
!!! CATTTTGATTGGTGAAGAAT+GGG - chr2_1:17046927-17046946 None:intergenic 30.0%
!!! TCATTTTGATTGGTGAAGAA+TGG - chr2_1:17046928-17046947 None:intergenic 30.0%
! AAACGGTTACTTACTTGTTA+GGG - chr2_1:17046996-17047015 None:intergenic 30.0%
TAAACGGTTACTTACTTGTT+AGG - chr2_1:17046997-17047016 None:intergenic 30.0%
TAACAAGTAAGTAACCGTTT+AGG + chr2_1:17046996-17047015 Msa0198440:intron 30.0%
AACAAGTAAGTAACCGTTTA+GGG + chr2_1:17046997-17047016 Msa0198440:intron 30.0%
ACATGATGATAAACCCTAAA+CGG - chr2_1:17047013-17047032 None:intergenic 30.0%
GTAGATGAAAGCAAAATGAT+TGG + chr2_1:17047166-17047185 Msa0198440:CDS 30.0%
!! TAAACTCATTGGTGTTTTCA+TGG + chr2_1:17047198-17047217 Msa0198440:CDS 30.0%
!!! TTAGACCTCATTTTTTTGCA+CGG + chr2_1:17047284-17047303 Msa0198440:CDS 30.0%
TAAACAACTAATTGACAGTC+TGG - chr2_1:17047414-17047433 None:intergenic 30.0%
TTGTGAAGGTTTGTCAATTA+CGG + chr2_1:17047437-17047456 Msa0198440:intron 30.0%
!!! CGTTTAGATCACCTTATTTT+CGG - chr2_1:17047521-17047540 None:intergenic 30.0%
ATCTAAACGTAACTTCTGAT+AGG + chr2_1:17047532-17047551 Msa0198440:intron 30.0%
TTGCCAGAATAGCAATTATT+TGG + chr2_1:17047837-17047856 Msa0198440:intron 30.0%
! TTGCCAAATAATTGCTATTC+TGG - chr2_1:17047843-17047862 None:intergenic 30.0%
ACCATATTGCGAAACAATAT+AGG + chr2_1:17047878-17047897 Msa0198440:intron 30.0%
CCATATTGCGAAACAATATA+GGG + chr2_1:17047879-17047898 Msa0198440:intron 30.0%
! TATGAAGAAGTTGCTTTATG+TGG + chr2_1:17048130-17048149 Msa0198440:intron 30.0%
GCTTTATGTGGTATGTTAAT+TGG + chr2_1:17048142-17048161 Msa0198440:intron 30.0%
! TTTTTCTGCATCTTTGTAGT+AGG - chr2_1:17048371-17048390 None:intergenic 30.0%
!!! GCATTAACTGTTTTTTTGTG+TGG + chr2_1:17048458-17048477 Msa0198440:intron 30.0%
! ACTTTTGAACTGGATGAATA+TGG - chr2_1:17048495-17048514 None:intergenic 30.0%
! AACGTAACAAACTTTTGAAC+TGG - chr2_1:17048505-17048524 None:intergenic 30.0%
CATTGTCTAGTTAAAATCCA+AGG - chr2_1:17048532-17048551 None:intergenic 30.0%
!!! CTTGGATTTTAACTAGACAA+TGG + chr2_1:17048530-17048549 Msa0198440:intron 30.0%
TTGTAGAAGCAAAATACTTC+TGG + chr2_1:17048611-17048630 Msa0198440:intron 30.0%
! ACCATAATTAGGAGAACTTT+TGG + chr2_1:17048657-17048676 Msa0198440:intron 30.0%
TCCAAAAGTTCTCCTAATTA+TGG - chr2_1:17048661-17048680 None:intergenic 30.0%
TGGGAGAATTCATAATATCT+TGG - chr2_1:17048963-17048982 None:intergenic 30.0%
! TTTTGTCATGTTTGAATCCT+TGG - chr2_1:17049082-17049101 None:intergenic 30.0%
TTCAAACATGACAAAAGATG+AGG + chr2_1:17049086-17049105 Msa0198440:CDS 30.0%
AAGAGAGATTGAATATTTGG+GGG + chr2_1:17049400-17049419 Msa0198440:intron 30.0%
CTGCTTAGCTAGATATTATA+TGG + chr2_1:17049671-17049690 Msa0198440:intron 30.0%
AAAACTAAATAGGCAATAGC+TGG - chr2_1:17049721-17049740 None:intergenic 30.0%
TCATTTATACAAGACTTCAG+TGG + chr2_1:17049781-17049800 Msa0198440:CDS 30.0%
! TTGACTATTCGAATCTCTTT+TGG - chr2_1:17049827-17049846 None:intergenic 30.0%
CAAGTATATTCTTCGAATTG+AGG + chr2_1:17049844-17049863 Msa0198440:CDS 30.0%
AGGTGTAAATGCATCTTTAA+GGG - chr2_1:17049891-17049910 None:intergenic 30.0%
CGATTGTAACATCAAAAGTT+AGG + chr2_1:17050392-17050411 Msa0198440:three_prime_UTR 30.0%
GATAGAACAAATATTACCAC+AGG - chr2_1:17050707-17050726 None:intergenic 30.0%
! TAAAGGTATGTTTGGTTAGA+GGG - chr2_1:17050790-17050809 None:intergenic 30.0%
! TTAAAGGTATGTTTGGTTAG+AGG - chr2_1:17050791-17050810 None:intergenic 30.0%
! TTTCAGTTGGTGCAAAAAAA+GGG - chr2_1:17050830-17050849 None:intergenic 30.0%
! ATTTCAGTTGGTGCAAAAAA+AGG - chr2_1:17050831-17050850 None:intergenic 30.0%
CTATGTGTGTAAATTTCAGT+TGG - chr2_1:17050843-17050862 None:intergenic 30.0%
TCTGATTATTGCAAGAACTG+GGG - chr2_1:17046790-17046809 None:intergenic 35.0%
CTCTGATTATTGCAAGAACT+GGG - chr2_1:17046791-17046810 None:intergenic 35.0%
TCTCTGATTATTGCAAGAAC+TGG - chr2_1:17046792-17046811 None:intergenic 35.0%
GATGAAGAAGAAGAGATGAA+AGG - chr2_1:17046893-17046912 None:intergenic 35.0%
!! GGAAGTGAAGTCATTTTGAT+TGG - chr2_1:17046938-17046957 None:intergenic 35.0%
! ACTTGTTAGGGTTTGAAGTT+TGG - chr2_1:17046984-17047003 None:intergenic 35.0%
! TTTGAAGCAACGTAGTTACA+GGG - chr2_1:17047121-17047140 None:intergenic 35.0%
GGAGTTTGTGATAAACTCAT+TGG + chr2_1:17047187-17047206 Msa0198440:CDS 35.0%
ATAAACCTACTCCAACTGAT+TGG + chr2_1:17047224-17047243 Msa0198440:CDS 35.0%
!!! TGTTAGCTTTTAGCAGAGAA+TGG + chr2_1:17047254-17047273 Msa0198440:CDS 35.0%
TTACACCGTGCAAAAAAATG+AGG - chr2_1:17047292-17047311 None:intergenic 35.0%
! AGTAGCTTTTCCTTCAAAAC+AGG - chr2_1:17047340-17047359 None:intergenic 35.0%
TTAGTTGTTTAGCGTTGTGA+AGG + chr2_1:17047423-17047442 Msa0198440:intron 35.0%
CAATTACGGATAATAGCAGT+TGG + chr2_1:17047451-17047470 Msa0198440:intron 35.0%
ACACAAACTGCTCAACAAAA+AGG + chr2_1:17047495-17047514 Msa0198440:intron 35.0%
CAACAAAAAGGCCGAAAATA+AGG + chr2_1:17047507-17047526 Msa0198440:intron 35.0%
CCCTATATTGTTTCGCAATA+TGG - chr2_1:17047882-17047901 None:intergenic 35.0%
!! CAAAGGTGCTATATAGAGTA+TGG - chr2_1:17047918-17047937 None:intergenic 35.0%
TATACATAGCAGAGCTACAA+AGG - chr2_1:17047935-17047954 None:intergenic 35.0%
! TTTGTAGCTCTGCTATGTAT+AGG + chr2_1:17047934-17047953 Msa0198440:intron 35.0%
! TAGTTGTCGTTTCAAACACT+TGG + chr2_1:17048030-17048049 Msa0198440:intron 35.0%
! AGTTGTCGTTTCAAACACTT+GGG + chr2_1:17048031-17048050 Msa0198440:intron 35.0%
TCAGAGACATAATGATCTTC+TGG + chr2_1:17048243-17048262 Msa0198440:CDS 35.0%
TCTTCTGGATGTAATCAGAA+AGG + chr2_1:17048258-17048277 Msa0198440:CDS 35.0%
!! AGTTTGTTACGTTTCTTCCT+TGG + chr2_1:17048512-17048531 Msa0198440:intron 35.0%
! TAGACAATGGTGCTTTTCAA+TGG + chr2_1:17048543-17048562 Msa0198440:intron 35.0%
! GCTTTTCAATGGTTGAACAT+TGG + chr2_1:17048554-17048573 Msa0198440:intron 35.0%
ATTGTCTTTGTTAAGCTGTG+TGG + chr2_1:17048682-17048701 Msa0198440:intron 35.0%
TGACATCTAGCAGATGATAT+TGG - chr2_1:17048746-17048765 None:intergenic 35.0%
TGAAAAGAACTGACAAAGCT+TGG + chr2_1:17048856-17048875 Msa0198440:intron 35.0%
GAAAAGAACTGACAAAGCTT+GGG + chr2_1:17048857-17048876 Msa0198440:intron 35.0%
AAAAGAACTGACAAAGCTTG+GGG + chr2_1:17048858-17048877 Msa0198440:intron 35.0%
CAAATTGTCTATCTTCCTAC+AGG - chr2_1:17048998-17049017 None:intergenic 35.0%
CTGTAGGAAGATAGACAATT+TGG + chr2_1:17048996-17049015 Msa0198440:CDS 35.0%
! AAAAGAACTTGATTCGACAC+TGG + chr2_1:17049026-17049045 Msa0198440:CDS 35.0%
! TATTGATGATCACCAAAGCT+TGG + chr2_1:17049049-17049068 Msa0198440:CDS 35.0%
! ATTGATGATCACCAAAGCTT+GGG + chr2_1:17049050-17049069 Msa0198440:CDS 35.0%
GTAAAATTTATGGTCACCTC+AGG + chr2_1:17049108-17049127 Msa0198440:intron 35.0%
ATTTCACGAATATGGAGGAT+AGG + chr2_1:17049158-17049177 Msa0198440:intron 35.0%
TTTCACGAATATGGAGGATA+GGG + chr2_1:17049159-17049178 Msa0198440:intron 35.0%
CACCATTGCAGCATAATTTA+TGG + chr2_1:17049303-17049322 Msa0198440:intron 35.0%
TGCCATAAATTATGCTGCAA+TGG - chr2_1:17049308-17049327 None:intergenic 35.0%
TACGCTTACTCAAAAACTCA+AGG + chr2_1:17049451-17049470 Msa0198440:intron 35.0%
ACGCTTACTCAAAAACTCAA+GGG + chr2_1:17049452-17049471 Msa0198440:intron 35.0%
! GTAGGTTTGTTTAATGGACA+AGG - chr2_1:17049634-17049653 None:intergenic 35.0%
! GAATGCGTAGGTTTGTTTAA+TGG - chr2_1:17049640-17049659 None:intergenic 35.0%
TTAAACAAACCTACGCATTC+AGG + chr2_1:17049640-17049659 Msa0198440:intron 35.0%
CAGGTGTAAATGCATCTTTA+AGG - chr2_1:17049892-17049911 None:intergenic 35.0%
CTTAAAGATGCATTTACACC+TGG + chr2_1:17049890-17049909 Msa0198440:CDS 35.0%
AGAACTTGAAGGAAACAATG+AGG + chr2_1:17049916-17049935 Msa0198440:CDS 35.0%
CTCGAAATTGAATTCAGTTG+TGG + chr2_1:17049992-17050011 Msa0198440:intron 35.0%
GCTTATCATTTGAGCAAAGA+AGG + chr2_1:17050081-17050100 Msa0198440:CDS 35.0%
!! TACTAAACTTAGTCTTGACC+AGG + chr2_1:17050525-17050544 Msa0198440:three_prime_UTR 35.0%
! AAAGGTATGTTTGGTTAGAG+GGG - chr2_1:17050789-17050808 None:intergenic 35.0%
! TTTTATACAGGTTCGAACCT+AGG - chr2_1:17050875-17050894 None:intergenic 35.0%
AGGTTCGAACCTGTATAAAA+AGG + chr2_1:17050875-17050894 Msa0198440:three_prime_UTR 35.0%
GGTTCGAACCTGTATAAAAA+GGG + chr2_1:17050876-17050895 Msa0198440:three_prime_UTR 35.0%
! GACTAAAGCCCTTTTTATAC+AGG - chr2_1:17050887-17050906 None:intergenic 35.0%
TTGAATTGCCCATTTCAACT+AGG + chr2_1:17051006-17051025 Msa0198440:intron 35.0%
!! TATCGGTTCCTAGTTGAAAT+GGG - chr2_1:17051017-17051036 None:intergenic 35.0%
!! TTATCGGTTCCTAGTTGAAA+TGG - chr2_1:17051018-17051037 None:intergenic 35.0%
TGATTGAGAAAATTAGGCGG+AGG + chr2_1:17046748-17046767 Msa0198440:five_prime_UTR 40.0%
CAGAATCGAAACTCACTTGA+TGG + chr2_1:17046823-17046842 Msa0198440:exon 40.0%
GAAGAAGAGATGAAAGGTGA+TGG - chr2_1:17046887-17046906 None:intergenic 40.0%
AAAGAGACGAAGCGAGAAAA+GGG - chr2_1:17046959-17046978 None:intergenic 40.0%
! GTTTGAAGCAACGTAGTTAC+AGG - chr2_1:17047122-17047141 None:intergenic 40.0%
AGATAATGCTTCGAGTGATG+TGG + chr2_1:17047144-17047163 Msa0198440:CDS 40.0%
AACAACCTTCTCCAATCAGT+TGG - chr2_1:17047238-17047257 None:intergenic 40.0%
!! TGAGACTGATCCTGTTTTGA+AGG + chr2_1:17047327-17047346 Msa0198440:CDS 40.0%
AGCAGTTGGAAATTGCTCTA+TGG + chr2_1:17047465-17047484 Msa0198440:intron 40.0%
GCAGTTGGAAATTGCTCTAT+GGG + chr2_1:17047466-17047485 Msa0198440:intron 40.0%
TTGTTGAGCAGTTTGTGTGT+GGG - chr2_1:17047493-17047512 None:intergenic 40.0%
TTTGTTGAGCAGTTTGTGTG+TGG - chr2_1:17047494-17047513 None:intergenic 40.0%
CGTAACTTCTGATAGGTTTG+TGG + chr2_1:17047539-17047558 Msa0198440:intron 40.0%
GCAATTTCCATAGCAGTTTG+TGG + chr2_1:17047623-17047642 Msa0198440:intron 40.0%
! TATTTTTCGCGATCCACGAT+TGG + chr2_1:17047809-17047828 Msa0198440:intron 40.0%
TGCTCTTGTGTAGATTGATG+AGG + chr2_1:17048216-17048235 Msa0198440:intron 40.0%
TGTAAAATCCTTCCTACGCT+TGG - chr2_1:17048311-17048330 None:intergenic 40.0%
ACATGTAAAGGAAAGTCCTG+AGG - chr2_1:17049127-17049146 None:intergenic 40.0%
TACACTGCAATGCAACAAAG+TGG + chr2_1:17049212-17049231 Msa0198440:intron 40.0%
GCAATGCAACAAAGTGGATA+AGG + chr2_1:17049218-17049237 Msa0198440:intron 40.0%
ATTATGCTGCAATGGTGTGT+TGG - chr2_1:17049300-17049319 None:intergenic 40.0%
TTCAAAAACTAAGCATGGGC+AGG - chr2_1:17049372-17049391 None:intergenic 40.0%
!! TGCCCATGCTTAGTTTTTGA+AGG + chr2_1:17049371-17049390 Msa0198440:intron 40.0%
!! GCCCATGCTTAGTTTTTGAA+GGG + chr2_1:17049372-17049391 Msa0198440:intron 40.0%
CCCCTTCAAAAACTAAGCAT+GGG - chr2_1:17049376-17049395 None:intergenic 40.0%
!! CCCATGCTTAGTTTTTGAAG+GGG + chr2_1:17049373-17049392 Msa0198440:intron 40.0%
TCCCCTTCAAAAACTAAGCA+TGG - chr2_1:17049377-17049396 None:intergenic 40.0%
GGGAAAATAACAAGCAAACG+AGG + chr2_1:17049420-17049439 Msa0198440:intron 40.0%
! TTTCCTTCAAGTTCTTCTCC+AGG - chr2_1:17049911-17049930 None:intergenic 40.0%
!! CAAAGAAGGTACCCTCATTA+GGG + chr2_1:17050095-17050114 Msa0198440:CDS 40.0%
TCCAGAGATCGTCGAAAAAT+TGG + chr2_1:17050137-17050156 Msa0198440:CDS 40.0%
!! TCCAATTTTTCGACGATCTC+TGG - chr2_1:17050141-17050160 None:intergenic 40.0%
GGAGATGTTAAAGAAGGTTG+TGG + chr2_1:17050158-17050177 Msa0198440:CDS 40.0%
TGTTAAAGAAGGTTGTGGAG+AGG + chr2_1:17050163-17050182 Msa0198440:CDS 40.0%
AGAGGAACTTCATGTGAAGA+GGG + chr2_1:17050181-17050200 Msa0198440:exon 40.0%
GAGCAATGCTGTTGTAAATC+CGG - chr2_1:17050288-17050307 None:intergenic 40.0%
ACAACAGAGTAAGCTGAATC+AGG + chr2_1:17050347-17050366 Msa0198440:three_prime_UTR 40.0%
AATTGCAGAACAACCTGAAG+AGG + chr2_1:17050740-17050759 Msa0198440:three_prime_UTR 40.0%
ACAACCTGAAGAGGTAAAAG+AGG + chr2_1:17050749-17050768 Msa0198440:three_prime_UTR 40.0%
GATGGAAGAGAAGAACGCAA+CGG - chr2_1:17046869-17046888 None:intergenic 45.0%
!! GGTGAAGAATGGGTTGAATG+AGG - chr2_1:17046917-17046936 None:intergenic 45.0%
GAAAGAGACGAAGCGAGAAA+AGG - chr2_1:17046960-17046979 None:intergenic 45.0%
CTTCTCCAATCAGTTGGAGT+AGG - chr2_1:17047232-17047251 None:intergenic 45.0%
CTACTCCAACTGATTGGAGA+AGG + chr2_1:17047230-17047249 Msa0198440:CDS 45.0%
TGTTGAGCAGTTTGTGTGTG+GGG - chr2_1:17047492-17047511 None:intergenic 45.0%
TTCTGATAGGTTTGTGGCGT+TGG + chr2_1:17047545-17047564 Msa0198440:intron 45.0%
TCTGATAGGTTTGTGGCGTT+GGG + chr2_1:17047546-17047565 Msa0198440:intron 45.0%
AGGTGTGGTCTGATAAATCG+AGG + chr2_1:17047569-17047588 Msa0198440:intron 45.0%
GGTGTGGTCTGATAAATCGA+GGG + chr2_1:17047570-17047589 Msa0198440:intron 45.0%
GTGTGGTCTGATAAATCGAG+GGG + chr2_1:17047571-17047590 Msa0198440:intron 45.0%
CGCTATACCACAAACTGCTA+TGG - chr2_1:17047633-17047652 None:intergenic 45.0%
CTCTCGTAGACAAGCATTTG+TGG + chr2_1:17048081-17048100 Msa0198440:intron 45.0%
TCGTAGACAAGCATTTGTGG+TGG + chr2_1:17048084-17048103 Msa0198440:intron 45.0%
GCAATATTGTCTCCAAGCGT+AGG + chr2_1:17048296-17048315 Msa0198440:CDS 45.0%
TATTGTCTCCAAGCGTAGGA+AGG + chr2_1:17048300-17048319 Msa0198440:CDS 45.0%
GCTTTCTGTAGCACCATCAT+AGG - chr2_1:17048908-17048927 None:intergenic 45.0%
! CTAATGTAGCTTGCGAGTAG+TGG - chr2_1:17049497-17049516 None:intergenic 45.0%
GAATACGATCCTGAATGCGT+AGG - chr2_1:17049652-17049671 None:intergenic 45.0%
TCTTCGAATTGAGGATCCTG+AGG + chr2_1:17049853-17049872 Msa0198440:CDS 45.0%
ACACCTGGAGAAGAACTTGA+AGG + chr2_1:17049905-17049924 Msa0198440:CDS 45.0%
TCACACGTGGATAAAGACTG+TGG + chr2_1:17050053-17050072 Msa0198440:CDS 45.0%
!! GCAAAGAAGGTACCCTCATT+AGG + chr2_1:17050094-17050113 Msa0198440:CDS 45.0%
TACCCTCATTAGGGAAGCAA+GGG + chr2_1:17050104-17050123 Msa0198440:CDS 45.0%
ATCCCTTGCTTCCCTAATGA+GGG - chr2_1:17050109-17050128 None:intergenic 45.0%
GAGAGGAACTTCATGTGAAG+AGG + chr2_1:17050180-17050199 Msa0198440:exon 45.0%
GAACTTCATGTGAAGAGGGT+GGG + chr2_1:17050185-17050204 Msa0198440:exon 45.0%
AGAGGGTGGGAAACATACTA+AGG + chr2_1:17050198-17050217 Msa0198440:three_prime_UTR 45.0%
ATGTCCATCAAGTGCAGATC+CGG + chr2_1:17050266-17050285 Msa0198440:three_prime_UTR 45.0%
AAATCCGGATCTGCACTTGA+TGG - chr2_1:17050273-17050292 None:intergenic 45.0%
!! CGATTGTGTCATTTGCACGT+GGG + chr2_1:17050461-17050480 Msa0198440:three_prime_UTR 45.0%
CGTGGGAGTGAAATGTTACA+TGG + chr2_1:17050478-17050497 Msa0198440:three_prime_UTR 45.0%
TTCCTCAGCCTTCAAAGACA+TGG - chr2_1:17050598-17050617 None:intergenic 45.0%
! TTGGCCTCTTTTACCTCTTC+AGG - chr2_1:17050756-17050775 None:intergenic 45.0%
AGAGGTAAAAGAGGCCAACA+AGG + chr2_1:17050758-17050777 Msa0198440:three_prime_UTR 45.0%
ACACATAGCTGTCAGATCCT+AGG + chr2_1:17050855-17050874 Msa0198440:three_prime_UTR 45.0%
GGGCATTTGAGCAAACACGA+GGG + chr2_1:17047591-17047610 Msa0198440:intron 50.0%
TCTGGCAATGTTGCCAATCG+TGG - chr2_1:17047825-17047844 None:intergenic 50.0%
GCTGCTGTACAAGCCTATGA+TGG + chr2_1:17048892-17048911 Msa0198440:CDS 50.0%
CTACAGGCAGCATCAAGTGT+GGG - chr2_1:17048982-17049001 None:intergenic 50.0%
ATCCACGTGTGAAGCTTCTC+TGG - chr2_1:17050045-17050064 None:intergenic 50.0%
GTACCCTCATTAGGGAAGCA+AGG + chr2_1:17050103-17050122 Msa0198440:CDS 50.0%
GATCCCTTGCTTCCCTAATG+AGG - chr2_1:17050110-17050129 None:intergenic 50.0%
GGAACTTCATGTGAAGAGGG+TGG + chr2_1:17050184-17050203 Msa0198440:exon 50.0%
GGGTGGGAAACATACTAAGG+TGG + chr2_1:17050201-17050220 Msa0198440:three_prime_UTR 50.0%
!! GCGATTGTGTCATTTGCACG+TGG + chr2_1:17050460-17050479 Msa0198440:three_prime_UTR 50.0%
TCCAGTGGCCATGTCTTTGA+AGG + chr2_1:17050587-17050606 Msa0198440:three_prime_UTR 50.0%
GGTATGTTTGGTTAGAGGGG+TGG - chr2_1:17050786-17050805 None:intergenic 50.0%
AAAAGCTACTCCGTCTCGCG+AGG + chr2_1:17047350-17047369 Msa0198440:CDS 55.0%
CTTTGAGCTTCCTCGCGAGA+CGG - chr2_1:17047363-17047382 None:intergenic 55.0%
TCTCGCGAGGAAGCTCAAAG+AGG + chr2_1:17047363-17047382 Msa0198440:CDS 55.0%
! GATAGGTTTGTGGCGTTGGG+AGG + chr2_1:17047549-17047568 Msa0198440:intron 55.0%
! GGGGCATTTGAGCAAACACG+AGG + chr2_1:17047590-17047609 Msa0198440:intron 55.0%
CCTACAGGCAGCATCAAGTG+TGG - chr2_1:17048983-17049002 None:intergenic 55.0%
CCACACTTGATGCTGCCTGT+AGG + chr2_1:17048980-17048999 Msa0198440:CDS 55.0%
GGATCCTGAGGAGCAACTGT+CGG + chr2_1:17049865-17049884 Msa0198440:CDS 55.0%
CACCAGAGAAGCTTCACACG+TGG + chr2_1:17050040-17050059 Msa0198440:CDS 55.0%
GCCTTCAAAGACATGGCCAC+TGG - chr2_1:17050591-17050610 None:intergenic 55.0%
! GGCCATGTCTTTGAAGGCTG+AGG + chr2_1:17050593-17050612 Msa0198440:three_prime_UTR 55.0%
! TTAGAGGGGTGGAGCCTTGT+TGG - chr2_1:17050775-17050794 None:intergenic 55.0%
! GTTTGTGGCGTTGGGAGGTG+TGG + chr2_1:17047554-17047573 Msa0198440:intron 60.0%
CTTGGCAGCAGCCCAAGCTT+TGG - chr2_1:17049064-17049083 None:intergenic 60.0%
CAAAGCTTGGGCTGCTGCCA+AGG + chr2_1:17049062-17049081 Msa0198440:CDS 60.0%
AGGGCCGACAGTTGCTCCTC+AGG - chr2_1:17049872-17049891 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 17046741 17051067 17046741 ID=Msa0198440;Name=Msa0198440
chr2_1 mRNA 17046741 17051067 17046741 ID=Msa0198440-mRNA-1;Parent=Msa0198440;Name=Msa0198440-mRNA-1;_AED=0.06;_eAED=0.06;_QI=101|1|1|1|0.83|0.71|7|804|401
chr2_1 exon 17046741 17047001 17046741 ID=Msa0198440-mRNA-1:exon:7138;Parent=Msa0198440-mRNA-1
chr2_1 exon 17047101 17047384 17047101 ID=Msa0198440-mRNA-1:exon:7139;Parent=Msa0198440-mRNA-1
chr2_1 exon 17048229 17048397 17048229 ID=Msa0198440-mRNA-1:exon:7140;Parent=Msa0198440-mRNA-1
chr2_1 exon 17048863 17049107 17048863 ID=Msa0198440-mRNA-1:exon:7141;Parent=Msa0198440-mRNA-1
chr2_1 exon 17049764 17049951 17049764 ID=Msa0198440-mRNA-1:exon:7142;Parent=Msa0198440-mRNA-1
chr2_1 exon 17050038 17050965 17050038 ID=Msa0198440-mRNA-1:exon:7143;Parent=Msa0198440-mRNA-1
chr2_1 exon 17051032 17051067 17051032 ID=Msa0198440-mRNA-1:exon:7144;Parent=Msa0198440-mRNA-1
chr2_1 five_prime_UTR 17046741 17046841 17046741 ID=Msa0198440-mRNA-1:five_prime_utr;Parent=Msa0198440-mRNA-1
chr2_1 CDS 17046842 17047001 17046842 ID=Msa0198440-mRNA-1:cds;Parent=Msa0198440-mRNA-1
chr2_1 CDS 17047101 17047384 17047101 ID=Msa0198440-mRNA-1:cds;Parent=Msa0198440-mRNA-1
chr2_1 CDS 17048229 17048397 17048229 ID=Msa0198440-mRNA-1:cds;Parent=Msa0198440-mRNA-1
chr2_1 CDS 17048863 17049107 17048863 ID=Msa0198440-mRNA-1:cds;Parent=Msa0198440-mRNA-1
chr2_1 CDS 17049764 17049951 17049764 ID=Msa0198440-mRNA-1:cds;Parent=Msa0198440-mRNA-1
chr2_1 CDS 17050038 17050197 17050038 ID=Msa0198440-mRNA-1:cds;Parent=Msa0198440-mRNA-1
chr2_1 three_prime_UTR 17050198 17050965 17050198 ID=Msa0198440-mRNA-1:three_prime_utr;Parent=Msa0198440-mRNA-1
chr2_1 three_prime_UTR 17051032 17051067 17051032 ID=Msa0198440-mRNA-1:three_prime_utr;Parent=Msa0198440-mRNA-1
Gene Sequence

>Msa0198440

ATGGAGTTACACACTTCAATTCTACCGTTGCGTTCTTCTCTTCCATCACCTTTCATCTCTTCTTCTTCATCACCTCATTCAACCCATTCTTCACCAATCAAAATGACTTCACTTCCCTTTTCTCGCTTCGTCTCTTTCACCAAACTTCAAACCCTAACAAGACGAAGAAGTTTACAACCCTGTAACTACGTTGCTTCAAACGAAGATAATGCTTCGAGTGATGTGGTAGATGAAAGCAAAATGATTGGAGTTTGTGATAAACTCATTGGTGTTTTCATGGTTGATAAACCTACTCCAACTGATTGGAGAAGGTTGTTAGCTTTTAGCAGAGAATGGAATAACATTAGACCTCATTTTTTTGCACGGTGTAACGATAAAGCAGTTTCTGAGACTGATCCTGTTTTGAAGGAAAAGCTACTCCGTCTCGCGAGGAAGCTCAAAGAGATTGATGAGGATGTTCAGAGACATAATGATCTTCTGGATGTAATCAGAAAGGATCCGTCTGAAATTAGCAATATTGTCTCCAAGCGTAGGAAGGATTTTACAAATGAATTCTTTGAGCATCTTCACACAGTGACTCAGTCCTACTACAAAGATGCAGAAAAACAAAATGAACTGACAAAGCTTGGGGAAGCATGCTTTGCTGCTGTACAAGCCTATGATGGTGCTACAGAAAGCATTGAGCAGATAAATGCTGCACAGCTGAAGTTCCAAGATATTATGAATTCTCCCACACTTGATGCTGCCTGTAGGAAGATAGACAATTTGGCTGAAAAAAAAGAACTTGATTCGACACTGGTATTGATGATCACCAAAGCTTGGGCTGCTGCCAAGGATTCAAACATGACAAAAGATGAGGTAAAAGACATCCTCTTTCATTTATACAAGACTTCAGTGGCAAATCTTCAGAGACTCGTTCCAAAAGAGATTCGAATAGTCAAGTATATTCTTCGAATTGAGGATCCTGAGGAGCAACTGTCGGCCCTTAAAGATGCATTTACACCTGGAGAAGAACTTGAAGGAAACAATGAGGATAGTTTGTACACGACACCAGAGAAGCTTCACACGTGGATAAAGACTGTGGTCGATGCTTATCATTTGAGCAAAGAAGGTACCCTCATTAGGGAAGCAAGGGATCTGTTGAATCCAGAGATCGTCGAAAAATTGGAGATGTTAAAGAAGGTTGTGGAGAGGAACTTCATGTGA

Protein sequence

>Msa0198440

MELHTSILPLRSSLPSPFISSSSSPHSTHSSPIKMTSLPFSRFVSFTKLQTLTRRRSLQPCNYVASNEDNASSDVVDESKMIGVCDKLIGVFMVDKPTPTDWRRLLAFSREWNNIRPHFFARCNDKAVSETDPVLKEKLLRLARKLKEIDEDVQRHNDLLDVIRKDPSEISNIVSKRRKDFTNEFFEHLHTVTQSYYKDAEKQNELTKLGEACFAAVQAYDGATESIEQINAAQLKFQDIMNSPTLDAACRKIDNLAEKKELDSTLVLMITKAWAAAKDSNMTKDEVKDILFHLYKTSVANLQRLVPKEIRIVKYILRIEDPEEQLSALKDAFTPGEELEGNNEDSLYTTPEKLHTWIKTVVDAYHLSKEGTLIREARDLLNPEIVEKLEMLKKVVERNFM*