AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1148930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1148930 MtrunA17_Chr7g0237761 97.973 444 9 0 1 444 1 444 0.0 909
Msa1148930 MtrunA17_Chr1g0169731 75.561 446 102 3 6 444 5 450 0.0 685
Msa1148930 MtrunA17_Chr4g0058051 71.728 382 107 1 64 444 26 407 0.0 580
Msa1148930 MtrunA17_Chr6g0458201 65.803 386 132 0 59 444 19 404 0.0 563
Msa1148930 MtrunA17_Chr3g0116521 70.466 386 114 0 59 444 21 406 0.0 556
Msa1148930 MtrunA17_Chr3g0123321 69.171 386 116 2 59 444 21 403 0.0 531
Msa1148930 MtrunA17_Chr3g0123331 63.377 385 138 3 62 444 23 406 6.50e-177 501
Msa1148930 MtrunA17_Chr1g0210321 62.466 373 137 1 67 436 35 407 9.16e-177 503
Msa1148930 MtrunA17_Chr1g0180381 60.471 382 144 1 66 440 34 415 4.90e-175 498
Msa1148930 MtrunA17_Chr7g0264891 63.564 376 136 1 66 440 35 410 4.17e-174 496
Msa1148930 MtrunA17_Chr4g0060211 55.440 386 163 4 66 444 51 434 4.49e-157 451
Msa1148930 MtrunA17_Chr5g0416061 58.873 355 145 1 91 444 95 449 3.80e-148 429
Msa1148930 MtrunA17_Chr8g0362561 55.801 362 152 2 91 444 94 455 2.48e-145 422
Msa1148930 MtrunA17_Chr2g0288921 56.000 350 150 3 96 444 63 409 8.15e-143 414
Msa1148930 MtrunA17_Chr5g0416041 50.224 446 211 3 10 444 4 449 1.28e-142 415
Msa1148930 MtrunA17_Chr4g0075231 57.429 350 145 3 96 444 39 385 2.88e-142 412
Msa1148930 MtrunA17_Chr6g0452861 56.780 354 152 1 92 444 100 453 1.34e-141 412
Msa1148930 MtrunA17_Chr7g0216581 48.690 458 197 6 9 444 10 451 3.45e-138 404
Msa1148930 MtrunA17_Chr8g0373761 45.070 355 185 7 96 444 42 392 2.54e-100 305
Msa1148930 MtrunA17_Chr8g0373721 44.507 355 187 7 96 444 42 392 2.99e-100 305
Msa1148930 MtrunA17_Chr3g0089181 44.507 355 187 7 96 444 23 373 1.36e-99 302
Msa1148930 MtrunA17_Chr8g0373701 43.662 355 190 7 96 444 97 447 3.74e-96 296
Msa1148930 MtrunA17_Chr8g0373731 45.352 355 184 7 96 444 42 392 4.51e-94 289
Msa1148930 MtrunA17_Chr5g0403481 45.070 355 185 7 96 444 41 391 1.18e-89 277
Msa1148930 MtrunA17_Chr5g0403461 45.070 355 185 7 96 444 41 391 1.18e-89 277
Msa1148930 MtrunA17_Chr5g0403491 45.070 355 185 7 96 444 41 391 1.18e-89 277
Msa1148930 MtrunA17_Chr4g0031851 45.062 324 170 6 121 440 14 333 6.80e-89 275
Msa1148930 MtrunA17_Chr5g0403391 43.662 355 190 7 96 444 41 391 1.08e-87 272
Msa1148930 MtrunA17_Chr5g0414541 42.697 356 192 8 96 444 41 391 1.09e-86 270
Msa1148930 MtrunA17_Chr5g0403411 44.225 355 188 7 96 444 41 391 2.78e-86 269
Msa1148930 MtrunA17_Chr1g0183941 44.981 269 144 3 171 437 1 267 6.58e-75 235
Msa1148930 MtrunA17_Chr3g0113551 71.429 126 36 0 241 366 161 286 4.52e-61 201
Msa1148930 MtrunA17_Chr6g0481851 39.636 275 108 6 129 401 6 224 6.86e-53 177
Msa1148930 MtrunA17_Chr2g0288901 50.641 156 72 3 290 444 5 156 5.12e-46 156
Msa1148930 MtrunA17_Chr2g0288911 58.197 122 50 1 171 291 1 122 3.59e-41 142
Msa1148930 MtrunA17_Chr1g0212931 36.806 288 156 7 113 399 13 275 1.63e-39 144
Msa1148930 MtrunA17_Chr1g0182021 35.540 287 161 4 113 399 62 324 4.18e-37 139
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1148930 AT4G13710.1 75.231 432 97 4 23 444 39 470 0.0 682
Msa1148930 AT4G13710.2 76.123 423 91 4 32 444 29 451 0.0 677
Msa1148930 AT3G24670.1 76.376 436 98 2 11 444 8 440 0.0 668
Msa1148930 AT3G07010.1 81.378 392 73 0 53 444 25 416 0.0 665
Msa1148930 AT1G04680.1 80.977 389 70 1 60 444 41 429 0.0 660
Msa1148930 AT4G13210.2 74.424 434 102 2 12 444 13 438 0.0 641
Msa1148930 AT5G48900.1 81.538 390 72 0 55 444 28 417 0.0 636
Msa1148930 AT3G07010.2 82.880 368 63 0 77 444 16 383 0.0 636
Msa1148930 AT4G13210.1 79.695 394 79 1 52 444 8 401 0.0 630
Msa1148930 AT3G24230.1 65.632 451 141 6 6 444 3 451 0.0 594
Msa1148930 AT1G67750.1 71.916 381 105 1 64 444 30 408 0.0 572
Msa1148930 AT5G63180.1 68.421 399 116 2 48 444 42 432 0.0 570
Msa1148930 AT4G24780.2 71.728 382 107 1 64 444 27 408 0.0 559
Msa1148930 AT4G24780.1 71.728 382 107 1 64 444 27 408 0.0 559
Msa1148930 AT3G27400.2 66.404 381 127 1 64 444 37 416 0.0 531
Msa1148930 AT3G27400.1 66.404 381 127 1 64 444 33 412 0.0 530
Msa1148930 AT3G53190.1 58.042 429 146 4 8 436 20 414 1.69e-172 493
Msa1148930 AT5G04310.3 57.561 410 158 2 42 435 25 434 3.14e-170 486
Msa1148930 AT5G04310.1 57.561 410 158 2 42 435 25 434 7.32e-169 484
Msa1148930 AT5G04310.2 57.561 410 158 2 42 435 25 434 7.32e-169 484
Msa1148930 AT3G54920.1 57.360 394 144 4 62 440 32 416 4.56e-163 469
Msa1148930 AT5G55720.1 55.875 383 157 5 63 444 21 392 2.30e-154 443
Msa1148930 AT1G11920.1 59.714 350 138 3 96 444 37 384 5.53e-154 442
Msa1148930 AT3G01270.1 53.301 409 181 3 46 444 67 475 3.53e-152 441
Msa1148930 AT1G14420.1 55.556 360 154 1 91 444 100 459 3.22e-149 432
Msa1148930 AT5G15110.1 57.465 355 149 2 92 444 118 472 1.44e-148 431
Msa1148930 AT4G22090.1 56.857 350 147 3 96 444 47 393 5.15e-147 424
Msa1148930 AT4G22080.1 56.857 350 147 3 96 444 47 393 1.14e-146 424
Msa1148930 AT2G02720.1 46.916 454 222 5 6 444 6 455 8.85e-142 413
Msa1148930 AT1G30350.1 53.009 349 148 3 96 444 36 368 9.71e-129 377
Msa1148930 AT5G09280.1 48.387 248 125 3 129 375 6 251 3.51e-78 245
Msa1148930 AT3G09540.1 38.408 289 150 7 113 399 61 323 2.37e-42 154
Msa1148930 AT3G55140.1 37.884 293 146 9 113 399 14 276 5.31e-42 152
Msa1148930 AT3G09540.3 38.062 289 147 8 113 399 61 319 9.68e-40 147
Msa1148930 AT3G55140.2 36.719 256 131 7 150 399 22 252 5.47e-35 132
Msa1148930 AT3G09540.2 36.992 246 129 5 113 357 61 281 7.72e-35 131

Find 170 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTGCATACAACCATTT+TGG 0.110425 7_4:+29562344 Msa1148930:CDS
TCTTGTCAACAGTTAGATTT+TGG 0.119998 7_4:+29563372 Msa1148930:three_prime_UTR
CGTAGCTCCCCTTCCCATTT+TGG 0.137331 7_4:+29561943 Msa1148930:CDS
ATGAGAACTGTTGTTGTTAT+TGG 0.149715 7_4:+29563414 Msa1148930:three_prime_UTR
TCTTTGGTTCCAGTCATATT+TGG 0.228663 7_4:+29562001 Msa1148930:CDS
TCATGATCAATTCTTGCTTC+AGG 0.237394 7_4:-29561780 None:intergenic
TGGTCTTGTTGATGCTATTA+TGG 0.249104 7_4:+29562056 Msa1148930:CDS
TTGCATTGTTATAGTAGATT+TGG 0.253485 7_4:+29563295 Msa1148930:three_prime_UTR
CCATTGTCCTCCATCCAAAA+TGG 0.255429 7_4:-29561957 None:intergenic
TAGAAGCCATCTCTCACTTT+TGG 0.262555 7_4:+29563456 Msa1148930:three_prime_UTR
ATGATACAGGTTATGTTATT+AGG 0.266694 7_4:+29562281 Msa1148930:intron
GGTGATGGCATTTCCATCTT+TGG 0.269913 7_4:+29561985 Msa1148930:CDS
TATGCTAGAGCCTCAAGTTT+AGG 0.285322 7_4:+29563047 Msa1148930:CDS
TGGATACAGGGTCCGGAGTA+TGG 0.302482 7_4:+29562940 Msa1148930:CDS
TTCACGGGGTCGTCGTCTCT+TGG 0.302742 7_4:-29561676 None:intergenic
TTCCTATTGCCCATTTCATT+TGG 0.306173 7_4:-29563679 None:intergenic
GCTGATTGTGCCATTGGTTT+TGG 0.316248 7_4:+29561604 Msa1148930:CDS
AGAAGAAGATGAGAAGAAAA+TGG 0.320484 7_4:-29557946 None:intergenic
CTAGTTACCTTGGCATCCTT+TGG 0.320663 7_4:-29562379 None:intergenic
TGACGGAGAGTGCCAGGTCT+TGG 0.329790 7_4:-29561700 None:intergenic
TCGGCTTACAATCATGGATA+TGG 0.339277 7_4:-29561903 None:intergenic
ATGCTAGAGCCTCAAGTTTA+GGG 0.340135 7_4:+29563048 Msa1148930:CDS
GGATAAGACCCTCCCCAAAA+TGG 0.344066 7_4:-29562358 None:intergenic
ACCAACTAAAGAAGATGATT+TGG 0.350395 7_4:-29563072 None:intergenic
GCCAATGTTCATATTGCCTT+TGG 0.350632 7_4:+29561832 Msa1148930:CDS
GTTCTTTCCCTTTACTCGTT+TGG 0.357030 7_4:-29563168 None:intergenic
TCCTATTGCCCATTTCATTT+GGG 0.364442 7_4:-29563678 None:intergenic
TTGATCTGTCCCAAATGAAA+TGG 0.366978 7_4:+29563669 Msa1148930:three_prime_UTR
TGAATCCCTTGGAAAATTAG+AGG 0.369319 7_4:-29563506 None:intergenic
TCGTAAGAATGTTACCTCTT+TGG 0.375965 7_4:-29562819 None:intergenic
ATTGGCACCACGACCATCTA+TGG 0.380940 7_4:-29561815 None:intergenic
GCCAAATCATCTTCTTTAGT+TGG 0.384213 7_4:+29563071 Msa1148930:CDS
CATGATCAATTCTTGCTTCA+GGG 0.386947 7_4:-29561779 None:intergenic
AATGTTACCTCTTTGGCAAA+AGG 0.387769 7_4:-29562812 None:intergenic
GACGGAGAGTGCCAGGTCTT+GGG 0.402712 7_4:-29561699 None:intergenic
GGTCTTGTTGATGCTATTAT+GGG 0.421679 7_4:+29562057 Msa1148930:CDS
TCACGGGGTCGTCGTCTCTT+GGG 0.425792 7_4:-29561675 None:intergenic
GGAGAGAAAGAAAAGCATAA+AGG 0.426668 7_4:+29563231 Msa1148930:three_prime_UTR
TTGCCTTGGCTGTTAATTGT+GGG 0.427394 7_4:-29562767 None:intergenic
TCCCAGTCGGCTTACAATCA+TGG 0.429765 7_4:-29561909 None:intergenic
GAGTATGGAAGGGTTGGAAT+TGG 0.435726 7_4:+29562955 Msa1148930:CDS
AGTGCCAGGTCTTGGGTTCA+CGG 0.439411 7_4:-29561692 None:intergenic
CATTGGGTGATGTATGCTAT+TGG 0.440613 7_4:+29562731 Msa1148930:CDS
AACAGTTTCAAGACCATAGA+TGG 0.441561 7_4:+29561802 Msa1148930:CDS
TCAACAACCAAACGAGTAAA+GGG 0.445435 7_4:+29563161 Msa1148930:three_prime_UTR
GTTGCCTTGGCTGTTAATTG+TGG 0.451055 7_4:-29562768 None:intergenic
TATAACAATGCAATAATAAG+AGG 0.451336 7_4:-29563285 None:intergenic
CTCAATTTACCTCGTTGTGG+TGG 0.451940 7_4:-29562116 None:intergenic
GTGCCAGGTCTTGGGTTCAC+GGG 0.453527 7_4:-29561691 None:intergenic
ATCAACAACCAAACGAGTAA+AGG 0.455062 7_4:+29563160 Msa1148930:three_prime_UTR
GTGACAAAGAGGGTGGATAC+AGG 0.460057 7_4:+29562927 Msa1148930:CDS
ATGTTACCTCTTTGGCAAAA+GGG 0.462229 7_4:-29562811 None:intergenic
TCCCAAATGAAATGGGCAAT+AGG 0.464163 7_4:+29563677 Msa1148930:three_prime_UTR
GTTAAGCAACAATGGAGTTA+CGG 0.469919 7_4:+29558015 Msa1148930:exon
GAAAGAAAAGCATAAAGGAA+TGG 0.470361 7_4:+29563236 Msa1148930:three_prime_UTR
ACGGCGTGACGGAGAGTGCC+AGG 0.476026 7_4:-29561706 None:intergenic
AATATGACTGGAACCAAAGA+TGG 0.477110 7_4:-29561998 None:intergenic
TTAGTTGGTACTTTAACTGC+AGG 0.478938 7_4:+29563086 Msa1148930:CDS
GTGGTGGGTGAAGTAGTTAT+TGG 0.479572 7_4:-29562100 None:intergenic
GCTGGCGCTGTGACAAGCTT+TGG 0.480343 7_4:+29561560 Msa1148930:CDS
GCTGCAGCTCCTCTTCCTGA+TGG 0.482198 7_4:-29563020 None:intergenic
CTGGTGTTATTAAATGTCGC+CGG 0.482263 7_4:+29563111 Msa1148930:CDS
ACCATGGAAGCAATCTCCTC+TGG 0.483733 7_4:-29558640 None:intergenic
CGGTTGGCTGATTGTGCCAT+TGG 0.488142 7_4:+29561598 Msa1148930:CDS
TATGGAAGGGTTGGAATTGG+AGG 0.491858 7_4:+29562958 Msa1148930:CDS
ATCCATGATTGTAAGCCGAC+TGG 0.492456 7_4:+29561907 Msa1148930:CDS
CAGCGCCAGCAGTCATCCAT+TGG 0.493207 7_4:-29561547 None:intergenic
TGATCTGTCCCAAATGAAAT+GGG 0.493800 7_4:+29563670 Msa1148930:three_prime_UTR
CATTGTCCTCCATCCAAAAT+GGG 0.494585 7_4:-29561956 None:intergenic
AAACAATGACTATACACATT+GGG 0.495499 7_4:+29562715 Msa1148930:CDS
TCTCTGTCTAATTGCGCTGA+TGG 0.499109 7_4:+29562036 Msa1148930:CDS
TGGTGTTATTAAATGTCGCC+GGG 0.500739 7_4:+29563112 Msa1148930:CDS
GTAGTTATTGGAAACGGTAA+TGG 0.501809 7_4:-29562088 None:intergenic
TCCAGAGGAGATTGCTTCCA+TGG 0.502756 7_4:+29558639 Msa1148930:CDS
TACAGGGTCCGGAGTATGGA+AGG 0.503644 7_4:+29562944 Msa1148930:CDS
GAATGTATTGATCAAATAGT+TGG 0.508802 7_4:+29563699 Msa1148930:three_prime_UTR
AAGAAGCGTGATAGCGAGAA+TGG 0.510985 7_4:-29558060 None:intergenic
CCCAAAATGGTTGTATGCAA+TGG 0.513203 7_4:-29562345 None:intergenic
GGGCAAGGTATCTGTTGCCT+TGG 0.513269 7_4:-29562781 None:intergenic
GAAATCCAATGGATGACTGC+TGG 0.513725 7_4:+29561542 Msa1148930:CDS
GGTACTTTAACTGCAGGTGC+TGG 0.514799 7_4:+29563092 Msa1148930:CDS
GTGATCAATCCAAATATGAC+TGG 0.515085 7_4:-29562010 None:intergenic
TTGTTATAGTAGATTTGGAT+TGG 0.515669 7_4:+29563300 Msa1148930:three_prime_UTR
ATTGGAAACGGTAATGGCGG+TGG 0.517945 7_4:-29562082 None:intergenic
GTCACGCCGTCATTCAAGAT+AGG 0.520035 7_4:+29561719 Msa1148930:CDS
GAATCCCTTGGAAAATTAGA+GGG 0.523122 7_4:-29563505 None:intergenic
CATGATGATAGTGTTGTGAA+TGG 0.528531 7_4:+29558260 Msa1148930:intron
CTTTGGCAAAAGGGTTCTGA+GGG 0.532600 7_4:-29562802 None:intergenic
GGTTGGAATTGGAGGTCCGA+GGG 0.539450 7_4:+29562966 Msa1148930:CDS
GTACCGCCGCAGAAAGCGGT+TGG 0.543660 7_4:+29561582 Msa1148930:CDS
AATAGTAATGCATGCTCCAA+AGG 0.544329 7_4:-29561848 None:intergenic
TCTTTGGCAAAAGGGTTCTG+AGG 0.544752 7_4:-29562803 None:intergenic
TCCATGATTGTAAGCCGACT+GGG 0.546175 7_4:+29561908 Msa1148930:CDS
GAGCTTGAATAATTCATCAA+TGG 0.547562 7_4:+29558304 Msa1148930:CDS
AAGAGGGTGGATACAGGGTC+CGG 0.551709 7_4:+29562933 Msa1148930:CDS
GTCGTTATGATCAATAGCAT+TGG 0.551956 7_4:-29558093 None:intergenic
AATGCTATCGGTGGCCGTGA+CGG 0.552465 7_4:+29561631 Msa1148930:CDS
TCAATTTACCTCGTTGTGGT+GGG 0.552926 7_4:-29562115 None:intergenic
TTGGGGAGGGTCTTATCCAA+AGG 0.555778 7_4:+29562363 Msa1148930:CDS
TCCTCCATCCAAAATGGGAA+GGG 0.556374 7_4:-29561951 None:intergenic
GGTCCGGAGTATGGAAGGGT+TGG 0.562652 7_4:+29562949 Msa1148930:CDS
ATCACCAATGTCATCATCCA+TGG 0.564338 7_4:+29561877 Msa1148930:CDS
AAAACAGAGTTAAGCAACAA+TGG 0.566759 7_4:+29558007 Msa1148930:exon
GTCTTATCCAAAGGATGCCA+AGG 0.567344 7_4:+29562372 Msa1148930:CDS
CTATTGATCATAACGACTCA+AGG 0.567769 7_4:+29558099 Msa1148930:CDS
GGTGAAGTAGTTATTGGAAA+CGG 0.568326 7_4:-29562094 None:intergenic
GACCCCGTGAACCCAAGACC+TGG 0.571184 7_4:+29561688 Msa1148930:CDS
ATACAGCAGAGGATACATAT+AGG 0.574229 7_4:-29563570 None:intergenic
GTCCTCCATCCAAAATGGGA+AGG 0.575724 7_4:-29561952 None:intergenic
CAGCCAACCGCTTTCTGCGG+CGG 0.578877 7_4:-29561585 None:intergenic
TGTATTAACACATGCCACCC+CGG 0.580417 7_4:-29563130 None:intergenic
TACGCAATCACACGGAGAGA+AGG 0.580498 7_4:+29561491 Msa1148930:CDS
TGCCAGGTCTTGGGTTCACG+GGG 0.582221 7_4:-29561690 None:intergenic
TGACAAAGAGGGTGGATACA+GGG 0.585715 7_4:+29562928 Msa1148930:CDS
TAAACAATGACTATACACAT+TGG 0.589439 7_4:+29562714 Msa1148930:CDS
ATTTAGCAAAAGGTCTCCCT+CGG 0.591755 7_4:-29562982 None:intergenic
CTATCGGTGGCCGTGACGGA+AGG 0.592368 7_4:+29561635 Msa1148930:CDS
CCTCCATCCAAAATGGGAAG+GGG 0.592528 7_4:-29561950 None:intergenic
CAATGGCCTATCTTGAATGA+CGG 0.593970 7_4:-29561725 None:intergenic
AATCAGCCAACCGCTTTCTG+CGG 0.594304 7_4:-29561588 None:intergenic
TAATCTCCAAAAGTGAGAGA+TGG 0.597530 7_4:-29563462 None:intergenic
ATAATTCATCAATGGCGGAA+AGG 0.597934 7_4:+29558312 Msa1148930:CDS
AGTCTCAATTTACCTCGTTG+TGG 0.602217 7_4:-29562119 None:intergenic
ATGTGGGACTGGAAATCCAA+TGG 0.603052 7_4:+29561531 Msa1148930:CDS
CAAAAGGGTTCTGAGGGGCA+AGG 0.604683 7_4:-29562796 None:intergenic
AATCATGGATATGGACACCA+TGG 0.604716 7_4:-29561894 None:intergenic
TCCAAAGGCAATATGAACAT+TGG 0.605546 7_4:-29561833 None:intergenic
TGATTTGGCCCCTAAACTTG+AGG 0.605907 7_4:-29563057 None:intergenic
ATTCCAACCCTTCCATACTC+CGG 0.611120 7_4:-29562952 None:intergenic
CTTGAATAATTCATCAATGG+CGG 0.613119 7_4:+29558307 Msa1148930:CDS
TTCAAGACCATAGATGGTCG+TGG 0.615460 7_4:+29561808 Msa1148930:CDS
GTTATTAAATGTCGCCGGGG+TGG 0.616534 7_4:+29563116 Msa1148930:CDS
TATCTTGAATGACGGCGTGA+CGG 0.616846 7_4:-29561717 None:intergenic
AGGACAATGGCTGATGGTGA+TGG 0.620179 7_4:+29561970 Msa1148930:CDS
TTTGGTCGCAATGCTATCGG+TGG 0.622293 7_4:+29561622 Msa1148930:CDS
TCATTCAAGATAGGCCATTG+TGG 0.624115 7_4:+29561728 Msa1148930:CDS
TACACAATCGAGATTCGAGA+GGG 0.624570 7_4:-29563621 None:intergenic
TAAGCCGACTGGGAATGCTA+TGG 0.626089 7_4:+29561918 Msa1148930:CDS
TTTGGTACCGCCGCAGAAAG+CGG 0.627376 7_4:+29561578 Msa1148930:CDS
CAGGACTATACGCAATCACA+CGG 0.632843 7_4:+29561483 Msa1148930:intron
GGATGGAGGACAATGGCTGA+TGG 0.643191 7_4:+29561964 Msa1148930:CDS
TGGGTGATGTATGCTATTGG+AGG 0.647157 7_4:+29562734 Msa1148930:CDS
GGGTTGGAATTGGAGGTCCG+AGG 0.647861 7_4:+29562965 Msa1148930:CDS
TGCTAGAGCCTCAAGTTTAG+GGG 0.654577 7_4:+29563049 Msa1148930:CDS
CAACGTAGTACCTTCCGTCA+CGG 0.656117 7_4:-29561645 None:intergenic
ACAGGGTCCGGAGTATGGAA+GGG 0.658271 7_4:+29562945 Msa1148930:CDS
GAATTATTACGTATCAACCA+TGG 0.659930 7_4:-29558656 None:intergenic
GTCAAAAGACCATACAGCAG+AGG 0.662961 7_4:-29563581 None:intergenic
CTCTTGAACACAATCCACAA+TGG 0.663084 7_4:-29561742 None:intergenic
TGGACAGGTGACAAAGAGGG+TGG 0.664985 7_4:+29562920 Msa1148930:intron
GAACCCACAATTAACAGCCA+AGG 0.665968 7_4:+29562764 Msa1148930:CDS
GAATATTGCAGATGTAGACA+CGG 0.668694 7_4:+29562677 Msa1148930:intron
AGCATTGCGACCAAAACCAA+TGG 0.669104 7_4:-29561614 None:intergenic
ACTGTTGACAAGATAAACAG+TGG 0.669346 7_4:-29563362 None:intergenic
GTTATTGGAAACGGTAATGG+CGG 0.672422 7_4:-29562085 None:intergenic
GACACCATGGATGATGACAT+TGG 0.680615 7_4:-29561881 None:intergenic
AATATTGCAGATGTAGACAC+GGG 0.684120 7_4:+29562678 Msa1148930:intron
CTGTTGACAAGATAAACAGT+GGG 0.691709 7_4:-29563361 None:intergenic
ATGTGGACAGGTGACAAAGA+GGG 0.696684 7_4:+29562917 Msa1148930:intron
CGAACCATAGCATTCCCAGT+CGG 0.703490 7_4:-29561922 None:intergenic
ATACACAATCGAGATTCGAG+AGG 0.705670 7_4:-29563622 None:intergenic
GCATGCAGTTGATAATCCAG+AGG 0.706876 7_4:+29558624 Msa1148930:CDS
GATGTGGACAGGTGACAAAG+AGG 0.712511 7_4:+29562916 Msa1148930:intron
TATAGTCATTGTTTACCACG+TGG 0.716427 7_4:-29562706 None:intergenic
TTTGGCAAAAGGGTTCTGAG+GGG 0.747633 7_4:-29562801 None:intergenic
GGTGTTATTAAATGTCGCCG+GGG 0.749848 7_4:+29563113 Msa1148930:CDS
GATTGTGTTCAAGAGAGACA+TGG 0.751862 7_4:+29561750 Msa1148930:CDS
CTACTTCACCCACCACAACG+AGG 0.767107 7_4:+29562107 Msa1148930:CDS
ACACAATCGAGATTCGAGAG+GGG 0.783532 7_4:-29563620 None:intergenic
TAGACACGGGTATTTCCACG+TGG 0.797672 7_4:+29562691 Msa1148930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAATAATTAAATTAA+AGG - chr7_4:29558692-29558711 None:intergenic 0.0%
!!! TATTTTGTAATGATTAAAAT+CGG + chr7_4:29558397-29558416 Msa1148930:intron 10.0%
!! ATAAATAATTAAATTAAAGG+AGG - chr7_4:29558689-29558708 None:intergenic 10.0%
!! TTATAATTAATGACATTTAT+AGG + chr7_4:29559576-29559595 Msa1148930:intron 10.0%
!! CATATTAAAAAAATTAGAAA+AGG - chr7_4:29560365-29560384 None:intergenic 10.0%
!! CAAATAAAAAAAAATTGAGT+TGG + chr7_4:29558857-29558876 Msa1148930:intron 15.0%
!!! TTTTTTCATCAAAATTAATC+AGG - chr7_4:29559349-29559368 None:intergenic 15.0%
!! TATTAATTATATAAAACCAG+AGG - chr7_4:29559830-29559849 None:intergenic 15.0%
!! ATCTAAATCTATCAATAAAA+AGG - chr7_4:29560167-29560186 None:intergenic 15.0%
!!! TAACTTCTAAAATTTTTAGT+AGG + chr7_4:29560708-29560727 Msa1148930:intron 15.0%
!! AATATATCTAGAAAATGTTA+TGG - chr7_4:29560943-29560962 None:intergenic 15.0%
!!! AACATTTTCTAGATATATTT+TGG + chr7_4:29560944-29560963 Msa1148930:intron 15.0%
!!! ATACTTGTTAAATTTTAAAC+AGG + chr7_4:29561464-29561483 Msa1148930:intron 15.0%
!!! TATTTTTTTTTCCTTTTTGA+AGG + chr7_4:29562420-29562439 Msa1148930:intron 15.0%
!!! TTTAGTACTAGTATTTATTT+TGG + chr7_4:29562453-29562472 Msa1148930:intron 15.0%
!!! TTAGTACTAGTATTTATTTT+GGG + chr7_4:29562454-29562473 Msa1148930:intron 15.0%
!! CAAAATCAAAATTAACTGAA+CGG - chr7_4:29558565-29558584 None:intergenic 20.0%
!!! ATTGAGTTGGATTATTTTTT+TGG + chr7_4:29558870-29558889 Msa1148930:intron 20.0%
!!! GTAAACAAGTTTTAAATAGT+AGG + chr7_4:29559087-29559106 Msa1148930:intron 20.0%
!! GATTCACAACAAATTATAAA+TGG - chr7_4:29559216-29559235 None:intergenic 20.0%
!! TAATATATCATTCCAAAAAG+AGG - chr7_4:29559238-29559257 None:intergenic 20.0%
!! CATAAAAAAACATTTGGAAA+TGG - chr7_4:29559265-29559284 None:intergenic 20.0%
!!! CATTTCCAAATGTTTTTTTA+TGG + chr7_4:29559263-29559282 Msa1148930:intron 20.0%
!! TTTCACCATAAAAAAACATT+TGG - chr7_4:29559271-29559290 None:intergenic 20.0%
!!! ATTTTGATGAAAAAATGAGT+TGG + chr7_4:29559354-29559373 Msa1148930:intron 20.0%
!! TTTCAAAATAAATATCACCA+TGG + chr7_4:29559608-29559627 Msa1148930:intron 20.0%
!! AATATAAAGGTCATCAAATA+GGG - chr7_4:29559728-29559747 None:intergenic 20.0%
!!! AAAAGCATCAAAGAATATAA+AGG - chr7_4:29559741-29559760 None:intergenic 20.0%
!!! TTTAAAATGACTCTAGTAAA+AGG - chr7_4:29559786-29559805 None:intergenic 20.0%
!! ACTCAATCTAAACTTAATTA+TGG + chr7_4:29560398-29560417 Msa1148930:intron 20.0%
!!! ATAATTCTAAAAACATCATG+AGG - chr7_4:29560478-29560497 None:intergenic 20.0%
!! TAGAGAAAATTGAAATATGA+TGG + chr7_4:29561123-29561142 Msa1148930:intron 20.0%
!! TTATTATTGATGTATGTTGA+GGG - chr7_4:29561239-29561258 None:intergenic 20.0%
!! ATTATTATTGATGTATGTTG+AGG - chr7_4:29561240-29561259 None:intergenic 20.0%
!! AAAATTGTCCCTAAAATTAT+TGG + chr7_4:29561367-29561386 Msa1148930:intron 20.0%
!!! AATTCGTACCAATAATTTTA+GGG - chr7_4:29561378-29561397 None:intergenic 20.0%
!!! TAATTCGTACCAATAATTTT+AGG - chr7_4:29561379-29561398 None:intergenic 20.0%
!! TAAAAAGGTAGTATTAGAAA+AGG - chr7_4:29562195-29562214 None:intergenic 20.0%
!! ATAAATACTAGTACTAAAAC+TGG - chr7_4:29562451-29562470 None:intergenic 20.0%
!! TGATGAACTTTACTAAATAT+TGG + chr7_4:29562886-29562905 Msa1148930:intron 20.0%
!! AAATATTGGAAAATTTGATG+TGG + chr7_4:29562900-29562919 Msa1148930:intron 20.0%
!! GAATTAAAAAAGAAAAGAAG+AGG + chr7_4:29563210-29563229 Msa1148930:three_prime_UTR 20.0%
!! TATAACAATGCAATAATAAG+AGG - chr7_4:29563288-29563307 None:intergenic 20.0%
!!! AAAATAAATTTTGAATCCCT+TGG - chr7_4:29563520-29563539 None:intergenic 20.0%
!!! TCAAGTGTTTTCTAAATAAA+TGG - chr7_4:29563653-29563672 None:intergenic 20.0%
!!! TTAAGCTGCATATTTTTATC+CGG + chr7_4:29558764-29558783 Msa1148930:intron 25.0%
! ACAATTAGATGTGCTTAATA+TGG + chr7_4:29559142-29559161 Msa1148930:intron 25.0%
!!! ATGTTTTTTTATGGTGAAAG+TGG + chr7_4:29559272-29559291 Msa1148930:intron 25.0%
!! TATCAAGGATGCATAAATTT+TGG - chr7_4:29559513-29559532 None:intergenic 25.0%
! TAAATATCACCATGGAAAAA+CGG + chr7_4:29559616-29559635 Msa1148930:intron 25.0%
! ACAATTTCTAACTTTCTTGA+CGG - chr7_4:29559644-29559663 None:intergenic 25.0%
! AAATTGTATGAGTAATTGCA+TGG + chr7_4:29559657-29559676 Msa1148930:intron 25.0%
! AATTGTATGAGTAATTGCAT+GGG + chr7_4:29559658-29559677 Msa1148930:intron 25.0%
! GAATATAAAGGTCATCAAAT+AGG - chr7_4:29559729-29559748 None:intergenic 25.0%
! AGAATAATTTAATTCTCCTC+TGG + chr7_4:29559811-29559830 Msa1148930:intron 25.0%
! GAAATTTATTATGACCGAAA+TGG - chr7_4:29560012-29560031 None:intergenic 25.0%
! AAAGATGTTTGTACTTGTAA+AGG - chr7_4:29560072-29560091 None:intergenic 25.0%
!! AATTATTGGGTCTTTGTTTA+TGG + chr7_4:29560332-29560351 Msa1148930:intron 25.0%
! AAGTTTAGATTGAGTAGAAA+GGG - chr7_4:29560393-29560412 None:intergenic 25.0%
! TAAGTTTAGATTGAGTAGAA+AGG - chr7_4:29560394-29560413 None:intergenic 25.0%
! ATCTAAACTTAATTATGGCT+AGG + chr7_4:29560403-29560422 Msa1148930:intron 25.0%
! TCTAAACTTAATTATGGCTA+GGG + chr7_4:29560404-29560423 Msa1148930:intron 25.0%
! AGGTATAAAAAGACAAACAA+GGG - chr7_4:29560510-29560529 None:intergenic 25.0%
! GTCTAATCAGAAATTTATGT+GGG - chr7_4:29560533-29560552 None:intergenic 25.0%
! AGTCTAATCAGAAATTTATG+TGG - chr7_4:29560534-29560553 None:intergenic 25.0%
!! GAAGAGTGATTTACTAATTT+TGG - chr7_4:29560622-29560641 None:intergenic 25.0%
!!! TTTTCTAGATATATTTTGGC+TGG + chr7_4:29560948-29560967 Msa1148930:intron 25.0%
! TGGTCATTTAATAAGTTCAT+GGG - chr7_4:29561008-29561027 None:intergenic 25.0%
! TTGGTCATTTAATAAGTTCA+TGG - chr7_4:29561009-29561028 None:intergenic 25.0%
! TTATTAAATGACCAAGATTC+AGG + chr7_4:29561014-29561033 Msa1148930:intron 25.0%
! ATTATTAACTTCCTGAATCT+TGG - chr7_4:29561028-29561047 None:intergenic 25.0%
! TTACTTAAGATAATGAAGGA+GGG - chr7_4:29562147-29562166 None:intergenic 25.0%
!! GTTGTTACTTAAGATAATGA+AGG - chr7_4:29562151-29562170 None:intergenic 25.0%
! AATTGAGTTCAAAATGATAC+AGG + chr7_4:29562268-29562287 Msa1148930:intron 25.0%
! ATGATACAGGTTATGTTATT+AGG + chr7_4:29562281-29562300 Msa1148930:intron 25.0%
! ATGAGAAGTCTACTAAAATT+GGG + chr7_4:29562512-29562531 Msa1148930:intron 25.0%
! TAAACAATGACTATACACAT+TGG + chr7_4:29562714-29562733 Msa1148930:CDS 25.0%
! AAACAATGACTATACACATT+GGG + chr7_4:29562715-29562734 Msa1148930:CDS 25.0%
!!! TTCTTTTTTTCAGTTTGCTT+GGG - chr7_4:29563193-29563212 None:intergenic 25.0%
!!! ATTCTTTTTTTCAGTTTGCT+TGG - chr7_4:29563194-29563213 None:intergenic 25.0%
! TTGCATTGTTATAGTAGATT+TGG + chr7_4:29563295-29563314 Msa1148930:three_prime_UTR 25.0%
! TTGTTATAGTAGATTTGGAT+TGG + chr7_4:29563300-29563319 Msa1148930:three_prime_UTR 25.0%
!! GAATGTATTGATCAAATAGT+TGG + chr7_4:29563699-29563718 Msa1148930:three_prime_UTR 25.0%
! TTCTTTCGTTTTCTGTGTTT+TGG - chr7_4:29557989-29558008 None:intergenic 30.0%
AAAACAGAGTTAAGCAACAA+TGG + chr7_4:29558007-29558026 Msa1148930:exon 30.0%
GAGCTTGAATAATTCATCAA+TGG + chr7_4:29558304-29558323 Msa1148930:CDS 30.0%
CTTGAATAATTCATCAATGG+CGG + chr7_4:29558307-29558326 Msa1148930:CDS 30.0%
TGCAGATAATTCTAATCCAA+CGG - chr7_4:29558453-29558472 None:intergenic 30.0%
! TGCATTTTCAGCTTAAGTAA+TGG + chr7_4:29558589-29558608 Msa1148930:intron 30.0%
GAATTATTACGTATCAACCA+TGG - chr7_4:29558659-29558678 None:intergenic 30.0%
! TTTTTATCCGGATTTGAATC+TGG + chr7_4:29558776-29558795 Msa1148930:intron 30.0%
CATTTAATTGATCATGTGCA+TGG + chr7_4:29558933-29558952 Msa1148930:intron 30.0%
! GTATTTTCTTCCTCTGTTTT+TGG + chr7_4:29558970-29558989 Msa1148930:intron 30.0%
AATACAAACTAAAGCCAAGT+GGG - chr7_4:29559063-29559082 None:intergenic 30.0%
AAATACAAACTAAAGCCAAG+TGG - chr7_4:29559064-29559083 None:intergenic 30.0%
!! TTTGTTGTGAATCCTCTTTT+TGG + chr7_4:29559223-29559242 Msa1148930:intron 30.0%
ATTTATGCATCCTTGATACA+AGG + chr7_4:29559515-29559534 Msa1148930:intron 30.0%
! TTTTAAATACTACTGCAGTC+TGG - chr7_4:29559703-29559722 None:intergenic 30.0%
AGCTGGCAAATAAAATATTC+TGG - chr7_4:29559960-29559979 None:intergenic 30.0%
TTTATTATGACCGAAATGGT+CGG - chr7_4:29560008-29560027 None:intergenic 30.0%
! GTAAAGGCAATTTTCAGATA+AGG - chr7_4:29560056-29560075 None:intergenic 30.0%
! AGTCATGAAGATTGGATTTT+AGG - chr7_4:29560106-29560125 None:intergenic 30.0%
CCACTATACAAGAAATGAAA+GGG - chr7_4:29560221-29560240 None:intergenic 30.0%
ACCACTATACAAGAAATGAA+AGG - chr7_4:29560222-29560241 None:intergenic 30.0%
CTAAACTTAATTATGGCTAG+GGG + chr7_4:29560405-29560424 Msa1148930:intron 30.0%
GAGGTATAAAAAGACAAACA+AGG - chr7_4:29560511-29560530 None:intergenic 30.0%
TAATCAGAAATTTATGTGGG+AGG - chr7_4:29560530-29560549 None:intergenic 30.0%
CATAAATCTTACACGTTACA+GGG + chr7_4:29560576-29560595 Msa1148930:intron 30.0%
! TTGTGTGTTACTGATTACTT+TGG + chr7_4:29560743-29560762 Msa1148930:intron 30.0%
! TGTGTGTTACTGATTACTTT+GGG + chr7_4:29560744-29560763 Msa1148930:intron 30.0%
GTCATTTAATAAGTTCATGG+GGG - chr7_4:29561006-29561025 None:intergenic 30.0%
GGTCATTTAATAAGTTCATG+GGG - chr7_4:29561007-29561026 None:intergenic 30.0%
TACAATAAATGCCAAGTTAG+GGG - chr7_4:29561102-29561121 None:intergenic 30.0%
CTACAATAAATGCCAAGTTA+GGG - chr7_4:29561103-29561122 None:intergenic 30.0%
ACTACAATAAATGCCAAGTT+AGG - chr7_4:29561104-29561123 None:intergenic 30.0%
ATAGAATGATACGGTGTATA+CGG - chr7_4:29561170-29561189 None:intergenic 30.0%
!! ATTCAGTCCTTTAAGACAAA+CGG + chr7_4:29561311-29561330 Msa1148930:intron 30.0%
AAATTACCCGTTTGTCTTAA+AGG - chr7_4:29561321-29561340 None:intergenic 30.0%
GTTACTTAAGATAATGAAGG+AGG - chr7_4:29562148-29562167 None:intergenic 30.0%
CATGAGAAGTCTACTAAAAT+TGG + chr7_4:29562511-29562530 Msa1148930:intron 30.0%
AGAACTAGACAGAGAATTTA+TGG - chr7_4:29562634-29562653 None:intergenic 30.0%
AAAAAGCTCCATTTAGCAAA+AGG - chr7_4:29562995-29563014 None:intergenic 30.0%
ACCAACTAAAGAAGATGATT+TGG - chr7_4:29563075-29563094 None:intergenic 30.0%
! GAAAGAAAAGCATAAAGGAA+TGG + chr7_4:29563236-29563255 Msa1148930:three_prime_UTR 30.0%
! TCTTGTCAACAGTTAGATTT+TGG + chr7_4:29563372-29563391 Msa1148930:three_prime_UTR 30.0%
! CTTGTCAACAGTTAGATTTT+GGG + chr7_4:29563373-29563392 Msa1148930:three_prime_UTR 30.0%
! ATGAGAACTGTTGTTGTTAT+TGG + chr7_4:29563414-29563433 Msa1148930:three_prime_UTR 30.0%
! ATTTCCCTCTAATTTTCCAA+GGG + chr7_4:29563501-29563520 Msa1148930:three_prime_UTR 30.0%
GAAGACAAAAAGAAACTAAG+GGG - chr7_4:29563551-29563570 None:intergenic 30.0%
GGAAGACAAAAAGAAACTAA+GGG - chr7_4:29563552-29563571 None:intergenic 30.0%
AGGAAGACAAAAAGAAACTA+AGG - chr7_4:29563553-29563572 None:intergenic 30.0%
GTTAAGCAACAATGGAGTTA+CGG + chr7_4:29558015-29558034 Msa1148930:exon 35.0%
GTCGTTATGATCAATAGCAT+TGG - chr7_4:29558096-29558115 None:intergenic 35.0%
CTATTGATCATAACGACTCA+AGG + chr7_4:29558099-29558118 Msa1148930:CDS 35.0%
! CATGATGATAGTGTTGTGAA+TGG + chr7_4:29558260-29558279 Msa1148930:intron 35.0%
! ATAATTCATCAATGGCGGAA+AGG + chr7_4:29558312-29558331 Msa1148930:CDS 35.0%
!! ATAAAGGTGTTGATAACCGT+TGG + chr7_4:29558434-29558453 Msa1148930:intron 35.0%
TCGACATTGTCTGATGAAAT+AGG - chr7_4:29558739-29558758 None:intergenic 35.0%
TTACGATCCAGATTCAAATC+CGG - chr7_4:29558786-29558805 None:intergenic 35.0%
TTCTCAAAAGCCAAAAACAG+AGG - chr7_4:29558983-29559002 None:intergenic 35.0%
!!! TGTTTTTGGCTTTTGAGAAG+AGG + chr7_4:29558984-29559003 Msa1148930:intron 35.0%
CATATCTGATCCTTGTATCA+AGG - chr7_4:29559528-29559547 None:intergenic 35.0%
TACTGCAGTCTGGTAATAAA+TGG - chr7_4:29559693-29559712 None:intergenic 35.0%
! GATTGATTCATTAAGCACCA+TGG - chr7_4:29559898-29559917 None:intergenic 35.0%
GTGATTGAAGTCATGAAGAT+TGG - chr7_4:29560114-29560133 None:intergenic 35.0%
CCCTTTCATTTCTTGTATAG+TGG + chr7_4:29560218-29560237 Msa1148930:intron 35.0%
TACTTTCTCCTATGTTTCTC+TGG + chr7_4:29560283-29560302 Msa1148930:intron 35.0%
TTCGTAAACCAGAGAAACAT+AGG - chr7_4:29560294-29560313 None:intergenic 35.0%
CCTGTAACGTGTAAGATTTA+TGG - chr7_4:29560578-29560597 None:intergenic 35.0%
CCATAAATCTTACACGTTAC+AGG + chr7_4:29560575-29560594 Msa1148930:intron 35.0%
ATCACTCTTCAGTAGTCAAA+AGG + chr7_4:29560632-29560651 Msa1148930:intron 35.0%
TCACTCTTCAGTAGTCAAAA+GGG + chr7_4:29560633-29560652 Msa1148930:intron 35.0%
!!! ACTCTGTTTTTGGTTCTTTC+AGG - chr7_4:29560785-29560804 None:intergenic 35.0%
! GGGTTTATGAACTCTGTTTT+TGG - chr7_4:29560795-29560814 None:intergenic 35.0%
GTTCATAAACCCAGACTATT+AGG + chr7_4:29560803-29560822 Msa1148930:intron 35.0%
GCATGAATTCCTAATAGTCT+GGG - chr7_4:29560815-29560834 None:intergenic 35.0%
TGCATGAATTCCTAATAGTC+TGG - chr7_4:29560816-29560835 None:intergenic 35.0%
AGGATACGGATAGAATGATA+CGG - chr7_4:29561179-29561198 None:intergenic 35.0%
TGGGTCAACAATTAAGGATA+CGG - chr7_4:29561193-29561212 None:intergenic 35.0%
!! TTCAGTCCTTTAAGACAAAC+GGG + chr7_4:29561312-29561331 Msa1148930:intron 35.0%
!!! AGTCTGAGTTTTTTCTCATG+TGG + chr7_4:29561514-29561533 Msa1148930:CDS 35.0%
!!! GTCTGAGTTTTTTCTCATGT+GGG + chr7_4:29561515-29561534 Msa1148930:CDS 35.0%
CATGATCAATTCTTGCTTCA+GGG - chr7_4:29561782-29561801 None:intergenic 35.0%
TCATGATCAATTCTTGCTTC+AGG - chr7_4:29561783-29561802 None:intergenic 35.0%
AACAGTTTCAAGACCATAGA+TGG + chr7_4:29561802-29561821 Msa1148930:CDS 35.0%
TCCAAAGGCAATATGAACAT+TGG - chr7_4:29561836-29561855 None:intergenic 35.0%
AATAGTAATGCATGCTCCAA+AGG - chr7_4:29561851-29561870 None:intergenic 35.0%
AATATGACTGGAACCAAAGA+TGG - chr7_4:29562001-29562020 None:intergenic 35.0%
! TCTTTGGTTCCAGTCATATT+TGG + chr7_4:29562001-29562020 Msa1148930:CDS 35.0%
GTGATCAATCCAAATATGAC+TGG - chr7_4:29562013-29562032 None:intergenic 35.0%
!! TGGTCTTGTTGATGCTATTA+TGG + chr7_4:29562056-29562075 Msa1148930:CDS 35.0%
!! GGTCTTGTTGATGCTATTAT+GGG + chr7_4:29562057-29562076 Msa1148930:CDS 35.0%
GTAGTTATTGGAAACGGTAA+TGG - chr7_4:29562091-29562110 None:intergenic 35.0%
GGTGAAGTAGTTATTGGAAA+CGG - chr7_4:29562097-29562116 None:intergenic 35.0%
! ACCATTGCATACAACCATTT+TGG + chr7_4:29562344-29562363 Msa1148930:CDS 35.0%
! CCATTGCATACAACCATTTT+GGG + chr7_4:29562345-29562364 Msa1148930:CDS 35.0%
! CATTGCATACAACCATTTTG+GGG + chr7_4:29562346-29562365 Msa1148930:CDS 35.0%
AATGTTACTGCTAGTTACCT+TGG - chr7_4:29562392-29562411 None:intergenic 35.0%
ACTTCTCATGTCAAATAGAG+AGG - chr7_4:29562501-29562520 None:intergenic 35.0%
ATGACAACTAGACCTCTTTA+TGG + chr7_4:29562540-29562559 Msa1148930:intron 35.0%
! AACACTCTTTAGAAGAACAG+AGG - chr7_4:29562597-29562616 None:intergenic 35.0%
!! TCTAGTTCTTGCACTAACAA+TGG + chr7_4:29562645-29562664 Msa1148930:intron 35.0%
GAATATTGCAGATGTAGACA+CGG + chr7_4:29562677-29562696 Msa1148930:intron 35.0%
AATATTGCAGATGTAGACAC+GGG + chr7_4:29562678-29562697 Msa1148930:intron 35.0%
TATAGTCATTGTTTACCACG+TGG - chr7_4:29562709-29562728 None:intergenic 35.0%
ATGTTACCTCTTTGGCAAAA+GGG - chr7_4:29562814-29562833 None:intergenic 35.0%
AATGTTACCTCTTTGGCAAA+AGG - chr7_4:29562815-29562834 None:intergenic 35.0%
TCGTAAGAATGTTACCTCTT+TGG - chr7_4:29562822-29562841 None:intergenic 35.0%
TTGGAAAATTTGATGTGGAC+AGG + chr7_4:29562905-29562924 Msa1148930:intron 35.0%
GCCAAATCATCTTCTTTAGT+TGG + chr7_4:29563071-29563090 Msa1148930:CDS 35.0%
! TTAGTTGGTACTTTAACTGC+AGG + chr7_4:29563086-29563105 Msa1148930:CDS 35.0%
ATCAACAACCAAACGAGTAA+AGG + chr7_4:29563160-29563179 Msa1148930:three_prime_UTR 35.0%
TCAACAACCAAACGAGTAAA+GGG + chr7_4:29563161-29563180 Msa1148930:three_prime_UTR 35.0%
! GGAGAGAAAGAAAAGCATAA+AGG + chr7_4:29563231-29563250 Msa1148930:three_prime_UTR 35.0%
CTGTTGACAAGATAAACAGT+GGG - chr7_4:29563364-29563383 None:intergenic 35.0%
ACTGTTGACAAGATAAACAG+TGG - chr7_4:29563365-29563384 None:intergenic 35.0%
TAATCTCCAAAAGTGAGAGA+TGG - chr7_4:29563465-29563484 None:intergenic 35.0%
!! CTCTCACTTTTGGAGATTAT+TGG + chr7_4:29563466-29563485 Msa1148930:three_prime_UTR 35.0%
! GATTTCCCTCTAATTTTCCA+AGG + chr7_4:29563500-29563519 Msa1148930:three_prime_UTR 35.0%
GAATCCCTTGGAAAATTAGA+GGG - chr7_4:29563508-29563527 None:intergenic 35.0%
TGAATCCCTTGGAAAATTAG+AGG - chr7_4:29563509-29563528 None:intergenic 35.0%
CAAAAAGAAACTAAGGGGAA+GGG - chr7_4:29563546-29563565 None:intergenic 35.0%
ACAAAAAGAAACTAAGGGGA+AGG - chr7_4:29563547-29563566 None:intergenic 35.0%
ATACAGCAGAGGATACATAT+AGG - chr7_4:29563573-29563592 None:intergenic 35.0%
TATATGTATCCTCTGCTGTA+TGG + chr7_4:29563572-29563591 Msa1148930:intron 35.0%
TTGATCTGTCCCAAATGAAA+TGG + chr7_4:29563669-29563688 Msa1148930:three_prime_UTR 35.0%
TGATCTGTCCCAAATGAAAT+GGG + chr7_4:29563670-29563689 Msa1148930:three_prime_UTR 35.0%
TCCTATTGCCCATTTCATTT+GGG - chr7_4:29563681-29563700 None:intergenic 35.0%
TTCCTATTGCCCATTTCATT+TGG - chr7_4:29563682-29563701 None:intergenic 35.0%
!!! TTTTGGTGTCGTGTGAGAAA+AGG - chr7_4:29557972-29557991 None:intergenic 40.0%
CAAACAGTACTATTTGCCGT+CGG + chr7_4:29558514-29558533 Msa1148930:intron 40.0%
GCTTAATATGGTCCCATTAG+CGG + chr7_4:29559154-29559173 Msa1148930:intron 40.0%
ATCACAATGCAACCGCTAAT+GGG - chr7_4:29559169-29559188 None:intergenic 40.0%
GTATGAGTAATTGCATGGGT+AGG + chr7_4:29559662-29559681 Msa1148930:intron 40.0%
GCAGTCTGGTAATAAATGGT+GGG - chr7_4:29559689-29559708 None:intergenic 40.0%
TGCAGTCTGGTAATAAATGG+TGG - chr7_4:29559690-29559709 None:intergenic 40.0%
GATTCATTAAGCACCATGGA+AGG - chr7_4:29559894-29559913 None:intergenic 40.0%
ATCGCCATGTTCTTTGCATA+TGG + chr7_4:29559915-29559934 Msa1148930:intron 40.0%
TCGCCATGTTCTTTGCATAT+GGG + chr7_4:29559916-29559935 Msa1148930:intron 40.0%
GATCCCATATGCAAAGAACA+TGG - chr7_4:29559922-29559941 None:intergenic 40.0%
ACATTAGCATGTGGTTAAGC+TGG - chr7_4:29559977-29559996 None:intergenic 40.0%
GATCTCAGAACATTAGCATG+TGG - chr7_4:29559986-29560005 None:intergenic 40.0%
CCAAGACATGTGTTTAAGAG+GGG - chr7_4:29560245-29560264 None:intergenic 40.0%
GCCAAGACATGTGTTTAAGA+GGG - chr7_4:29560246-29560265 None:intergenic 40.0%
CTCTTAAACACATGTCTTGG+CGG + chr7_4:29560245-29560264 Msa1148930:intron 40.0%
GGGACACATTTCAGTATTCA+GGG + chr7_4:29560425-29560444 Msa1148930:intron 40.0%
ACAAAGGTAGCACATTCATG+TGG - chr7_4:29560876-29560895 None:intergenic 40.0%
ACAGGCTGTAGAAACTACAA+AGG - chr7_4:29560892-29560911 None:intergenic 40.0%
!!! TTAGGGGAGATCTAGTTTTG+GGG - chr7_4:29561086-29561105 None:intergenic 40.0%
!!! GTTAGGGGAGATCTAGTTTT+GGG - chr7_4:29561087-29561106 None:intergenic 40.0%
!! AGTTAGGGGAGATCTAGTTT+TGG - chr7_4:29561088-29561107 None:intergenic 40.0%
AAACTAGATCTCCCCTAACT+TGG + chr7_4:29561088-29561107 Msa1148930:intron 40.0%
GTCATGTGGGTCAACAATTA+AGG - chr7_4:29561199-29561218 None:intergenic 40.0%
!!! AGTTTTTTCTCATGTGGGAC+TGG + chr7_4:29561520-29561539 Msa1148930:CDS 40.0%
CAATGGCCTATCTTGAATGA+CGG - chr7_4:29561728-29561747 None:intergenic 40.0%
TCATTCAAGATAGGCCATTG+TGG + chr7_4:29561728-29561747 Msa1148930:CDS 40.0%
CTCTTGAACACAATCCACAA+TGG - chr7_4:29561745-29561764 None:intergenic 40.0%
GATTGTGTTCAAGAGAGACA+TGG + chr7_4:29561750-29561769 Msa1148930:CDS 40.0%
GCCAATGTTCATATTGCCTT+TGG + chr7_4:29561832-29561851 Msa1148930:CDS 40.0%
ATCACCAATGTCATCATCCA+TGG + chr7_4:29561877-29561896 Msa1148930:CDS 40.0%
AATCATGGATATGGACACCA+TGG - chr7_4:29561897-29561916 None:intergenic 40.0%
TCGGCTTACAATCATGGATA+TGG - chr7_4:29561906-29561925 None:intergenic 40.0%
CATTGTCCTCCATCCAAAAT+GGG - chr7_4:29561959-29561978 None:intergenic 40.0%
! GTTATTGGAAACGGTAATGG+CGG - chr7_4:29562088-29562107 None:intergenic 40.0%
TCAATTTACCTCGTTGTGGT+GGG - chr7_4:29562118-29562137 None:intergenic 40.0%
AGTCTCAATTTACCTCGTTG+TGG - chr7_4:29562122-29562141 None:intergenic 40.0%
CCCAAAATGGTTGTATGCAA+TGG - chr7_4:29562348-29562367 None:intergenic 40.0%
AGTTGGAATGGACCATAAAG+AGG - chr7_4:29562555-29562574 None:intergenic 40.0%
CATTGGGTGATGTATGCTAT+TGG + chr7_4:29562731-29562750 Msa1148930:CDS 40.0%
TTGCCTTGGCTGTTAATTGT+GGG - chr7_4:29562770-29562789 None:intergenic 40.0%
ATTTAGCAAAAGGTCTCCCT+CGG - chr7_4:29562985-29563004 None:intergenic 40.0%
! TTTTTCACTCCATCAGGAAG+AGG + chr7_4:29563011-29563030 Msa1148930:CDS 40.0%
TATGCTAGAGCCTCAAGTTT+AGG + chr7_4:29563047-29563066 Msa1148930:CDS 40.0%
ATGCTAGAGCCTCAAGTTTA+GGG + chr7_4:29563048-29563067 Msa1148930:CDS 40.0%
!! CTGGTGTTATTAAATGTCGC+CGG + chr7_4:29563111-29563130 Msa1148930:CDS 40.0%
!! TGGTGTTATTAAATGTCGCC+GGG + chr7_4:29563112-29563131 Msa1148930:CDS 40.0%
GTTCTTTCCCTTTACTCGTT+TGG - chr7_4:29563171-29563190 None:intergenic 40.0%
! TAGAAGCCATCTCTCACTTT+TGG + chr7_4:29563456-29563475 Msa1148930:three_prime_UTR 40.0%
TACACAATCGAGATTCGAGA+GGG - chr7_4:29563624-29563643 None:intergenic 40.0%
ATACACAATCGAGATTCGAG+AGG - chr7_4:29563625-29563644 None:intergenic 40.0%
TCCCAAATGAAATGGGCAAT+AGG + chr7_4:29563677-29563696 Msa1148930:three_prime_UTR 40.0%
! AAGAAGCGTGATAGCGAGAA+TGG - chr7_4:29558063-29558082 None:intergenic 45.0%
TTAAAATCGGAGCGTACACG+TGG + chr7_4:29558410-29558429 Msa1148930:intron 45.0%
!! GCATGCAGTTGATAATCCAG+AGG + chr7_4:29558624-29558643 Msa1148930:CDS 45.0%
GATCACAATGCAACCGCTAA+TGG - chr7_4:29559170-29559189 None:intergenic 45.0%
TCAGGCAAACACAAGAACAG+TGG - chr7_4:29559331-29559350 None:intergenic 45.0%
ACGTTCGAAGTTTCCTTCCA+TGG + chr7_4:29559878-29559897 Msa1148930:intron 45.0%
!! GTTCTGAGATCCGACCATTT+CGG + chr7_4:29559995-29560014 Msa1148930:intron 45.0%
CCCCTCTTAAACACATGTCT+TGG + chr7_4:29560242-29560261 Msa1148930:intron 45.0%
CGCCAAGACATGTGTTTAAG+AGG - chr7_4:29560247-29560266 None:intergenic 45.0%
GGGGACACATTTCAGTATTC+AGG + chr7_4:29560424-29560443 Msa1148930:intron 45.0%
GATGCATTGTGCTTGTAGAC+AGG - chr7_4:29560910-29560929 None:intergenic 45.0%
CTACAAGCACAATGCATCTC+TGG + chr7_4:29560912-29560931 Msa1148930:intron 45.0%
!!! GAGATCTAGTTTTGGGGTGT+CGG - chr7_4:29561080-29561099 None:intergenic 45.0%
GTATACGGAATAACGAGGGT+TGG - chr7_4:29561155-29561174 None:intergenic 45.0%
CGGTGTATACGGAATAACGA+GGG - chr7_4:29561159-29561178 None:intergenic 45.0%
ACGGTGTATACGGAATAACG+AGG - chr7_4:29561160-29561179 None:intergenic 45.0%
TGTATGTTGAGGGATGAGAC+TGG - chr7_4:29561229-29561248 None:intergenic 45.0%
CAGGACTATACGCAATCACA+CGG + chr7_4:29561483-29561502 Msa1148930:intron 45.0%
ATGTGGGACTGGAAATCCAA+TGG + chr7_4:29561531-29561550 Msa1148930:CDS 45.0%
GAAATCCAATGGATGACTGC+TGG + chr7_4:29561542-29561561 Msa1148930:CDS 45.0%
!!! GCTGATTGTGCCATTGGTTT+TGG + chr7_4:29561604-29561623 Msa1148930:CDS 45.0%
AGCATTGCGACCAAAACCAA+TGG - chr7_4:29561617-29561636 None:intergenic 45.0%
!! GGTTTTGGTCGCAATGCTAT+CGG + chr7_4:29561619-29561638 Msa1148930:CDS 45.0%
TATCTTGAATGACGGCGTGA+CGG - chr7_4:29561720-29561739 None:intergenic 45.0%
TTCAAGACCATAGATGGTCG+TGG + chr7_4:29561808-29561827 Msa1148930:CDS 45.0%
GACACCATGGATGATGACAT+TGG - chr7_4:29561884-29561903 None:intergenic 45.0%
ATCCATGATTGTAAGCCGAC+TGG + chr7_4:29561907-29561926 Msa1148930:CDS 45.0%
TCCATGATTGTAAGCCGACT+GGG + chr7_4:29561908-29561927 Msa1148930:CDS 45.0%
TCCTCCATCCAAAATGGGAA+GGG - chr7_4:29561954-29561973 None:intergenic 45.0%
CCATTGTCCTCCATCCAAAA+TGG - chr7_4:29561960-29561979 None:intergenic 45.0%
! CCATTTTGGATGGAGGACAA+TGG + chr7_4:29561957-29561976 Msa1148930:CDS 45.0%
! GGTGATGGCATTTCCATCTT+TGG + chr7_4:29561985-29562004 Msa1148930:CDS 45.0%
TCTCTGTCTAATTGCGCTGA+TGG + chr7_4:29562036-29562055 Msa1148930:CDS 45.0%
!! GTGGTGGGTGAAGTAGTTAT+TGG - chr7_4:29562103-29562122 None:intergenic 45.0%
CTCAATTTACCTCGTTGTGG+TGG - chr7_4:29562119-29562138 None:intergenic 45.0%
!! TGCATACAACCATTTTGGGG+AGG + chr7_4:29562349-29562368 Msa1148930:CDS 45.0%
!! GCATACAACCATTTTGGGGA+GGG + chr7_4:29562350-29562369 Msa1148930:CDS 45.0%
GTCTTATCCAAAGGATGCCA+AGG + chr7_4:29562372-29562391 Msa1148930:CDS 45.0%
CTAGTTACCTTGGCATCCTT+TGG - chr7_4:29562382-29562401 None:intergenic 45.0%
AACTGGACGCTCCTTCAAAA+AGG - chr7_4:29562434-29562453 None:intergenic 45.0%
CAAATAGAGAGGCTCAGCTT+AGG - chr7_4:29562490-29562509 None:intergenic 45.0%
GAGACACTAGGAAGTTGGAA+TGG - chr7_4:29562567-29562586 None:intergenic 45.0%
CAACTTCCTAGTGTCTCAGA+GGG + chr7_4:29562570-29562589 Msa1148930:intron 45.0%
TGGGTGATGTATGCTATTGG+AGG + chr7_4:29562734-29562753 Msa1148930:CDS 45.0%
GAACCCACAATTAACAGCCA+AGG + chr7_4:29562764-29562783 Msa1148930:CDS 45.0%
GTTGCCTTGGCTGTTAATTG+TGG - chr7_4:29562771-29562790 None:intergenic 45.0%
!! TTTGGCAAAAGGGTTCTGAG+GGG - chr7_4:29562804-29562823 None:intergenic 45.0%
! CTTTGGCAAAAGGGTTCTGA+GGG - chr7_4:29562805-29562824 None:intergenic 45.0%
TCTTTGGCAAAAGGGTTCTG+AGG - chr7_4:29562806-29562825 None:intergenic 45.0%
! TCAGAACCCTTTTGCCAAAG+AGG + chr7_4:29562805-29562824 Msa1148930:CDS 45.0%
ATGTGGACAGGTGACAAAGA+GGG + chr7_4:29562917-29562936 Msa1148930:intron 45.0%
ATTCCAACCCTTCCATACTC+CGG - chr7_4:29562955-29562974 None:intergenic 45.0%
GAGTATGGAAGGGTTGGAAT+TGG + chr7_4:29562955-29562974 Msa1148930:CDS 45.0%
TATGGAAGGGTTGGAATTGG+AGG + chr7_4:29562958-29562977 Msa1148930:CDS 45.0%
! GAGGGAGACCTTTTGCTAAA+TGG + chr7_4:29562984-29563003 Msa1148930:CDS 45.0%
!!! GGAGCTTTTTTCACTCCATC+AGG + chr7_4:29563005-29563024 Msa1148930:CDS 45.0%
TGCTAGAGCCTCAAGTTTAG+GGG + chr7_4:29563049-29563068 Msa1148930:CDS 45.0%
! TGATTTGGCCCCTAAACTTG+AGG - chr7_4:29563060-29563079 None:intergenic 45.0%
!! GGTGTTATTAAATGTCGCCG+GGG + chr7_4:29563113-29563132 Msa1148930:CDS 45.0%
TGTATTAACACATGCCACCC+CGG - chr7_4:29563133-29563152 None:intergenic 45.0%
GTCAAAAGACCATACAGCAG+AGG - chr7_4:29563584-29563603 None:intergenic 45.0%
! TGTATGGTCTTTTGACCCTG+TGG + chr7_4:29563588-29563607 Msa1148930:intron 45.0%
ACACAATCGAGATTCGAGAG+GGG - chr7_4:29563623-29563642 None:intergenic 45.0%
!!! TAATTATAATTTTAATGAAA+TGG - chr7_4:29559565-29559584 None:intergenic 5.0%
!! ATACAATAAATTATAATTAT+TGG + chr7_4:29560318-29560337 Msa1148930:intron 5.0%
!! TACAATAAATTATAATTATT+GGG + chr7_4:29560319-29560338 Msa1148930:intron 5.0%
!! TGATATAAAATTAATTAAAA+AGG - chr7_4:29562210-29562229 None:intergenic 5.0%
CTATTTGCCGTCGGTCAGAT+CGG + chr7_4:29558523-29558542 Msa1148930:intron 50.0%
TTCAGATCCGATCTGACCGA+CGG - chr7_4:29558533-29558552 None:intergenic 50.0%
TCCAGAGGAGATTGCTTCCA+TGG + chr7_4:29558639-29558658 Msa1148930:CDS 50.0%
ACCATGGAAGCAATCTCCTC+TGG - chr7_4:29558643-29558662 None:intergenic 50.0%
!!! TTGACGGTGCCGTTTTTCCA+TGG - chr7_4:29559628-29559647 None:intergenic 50.0%
CACATGTCTTGGCGGAGATT+TGG + chr7_4:29560253-29560272 Msa1148930:intron 50.0%
CTGTCCTACATCACCCAACA+AGG + chr7_4:29560841-29560860 Msa1148930:intron 50.0%
TCCTACATCACCCAACAAGG+TGG + chr7_4:29560844-29560863 Msa1148930:intron 50.0%
CCTACATCACCCAACAAGGT+GGG + chr7_4:29560845-29560864 Msa1148930:intron 50.0%
CTACATCACCCAACAAGGTG+GGG + chr7_4:29560846-29560865 Msa1148930:intron 50.0%
!!! ATCTAGTTTTGGGGTGTCGG+TGG - chr7_4:29561077-29561096 None:intergenic 50.0%
TGTTGAGGGATGAGACTGGT+GGG - chr7_4:29561225-29561244 None:intergenic 50.0%
ATGTTGAGGGATGAGACTGG+TGG - chr7_4:29561226-29561245 None:intergenic 50.0%
TACGCAATCACACGGAGAGA+AGG + chr7_4:29561491-29561510 Msa1148930:CDS 50.0%
AATCAGCCAACCGCTTTCTG+CGG - chr7_4:29561591-29561610 None:intergenic 50.0%
TTTGGTCGCAATGCTATCGG+TGG + chr7_4:29561622-29561641 Msa1148930:CDS 50.0%
CAACGTAGTACCTTCCGTCA+CGG - chr7_4:29561648-29561667 None:intergenic 50.0%
GTCACGCCGTCATTCAAGAT+AGG + chr7_4:29561719-29561738 Msa1148930:CDS 50.0%
ATTGGCACCACGACCATCTA+TGG - chr7_4:29561818-29561837 None:intergenic 50.0%
! TCCCAGTCGGCTTACAATCA+TGG - chr7_4:29561912-29561931 None:intergenic 50.0%
TAAGCCGACTGGGAATGCTA+TGG + chr7_4:29561918-29561937 Msa1148930:CDS 50.0%
CGAACCATAGCATTCCCAGT+CGG - chr7_4:29561925-29561944 None:intergenic 50.0%
CCTCCATCCAAAATGGGAAG+GGG - chr7_4:29561953-29561972 None:intergenic 50.0%
GTCCTCCATCCAAAATGGGA+AGG - chr7_4:29561955-29561974 None:intergenic 50.0%
! AGGACAATGGCTGATGGTGA+TGG + chr7_4:29561970-29561989 Msa1148930:CDS 50.0%
! ATTGGAAACGGTAATGGCGG+TGG - chr7_4:29562085-29562104 None:intergenic 50.0%
GGATAAGACCCTCCCCAAAA+TGG - chr7_4:29562361-29562380 None:intergenic 50.0%
! TTGGGGAGGGTCTTATCCAA+AGG + chr7_4:29562363-29562382 Msa1148930:CDS 50.0%
!! CCTCTGAGACACTAGGAAGT+TGG - chr7_4:29562572-29562591 None:intergenic 50.0%
CCAACTTCCTAGTGTCTCAG+AGG + chr7_4:29562569-29562588 Msa1148930:intron 50.0%
TAGACACGGGTATTTCCACG+TGG + chr7_4:29562691-29562710 Msa1148930:CDS 50.0%
GATGTGGACAGGTGACAAAG+AGG + chr7_4:29562916-29562935 Msa1148930:intron 50.0%
GGTACTTTAACTGCAGGTGC+TGG + chr7_4:29563092-29563111 Msa1148930:CDS 50.0%
GTTATTAAATGTCGCCGGGG+TGG + chr7_4:29563116-29563135 Msa1148930:CDS 50.0%
! GAGGGGTACACTATTCCACA+GGG - chr7_4:29563606-29563625 None:intergenic 50.0%
! AGAGGGGTACACTATTCCAC+AGG - chr7_4:29563607-29563626 None:intergenic 50.0%
GGAGCGTACACGTGGCATAA+AGG + chr7_4:29558418-29558437 Msa1148930:intron 55.0%
TCAGCACAGTCTGACCCACT+TGG + chr7_4:29559046-29559065 Msa1148930:intron 55.0%
CCCACCTTGTTGGGTGATGT+AGG - chr7_4:29560848-29560867 None:intergenic 55.0%
GTGGCTTACCCCACCTTGTT+GGG - chr7_4:29560857-29560876 None:intergenic 55.0%
TGTGGCTTACCCCACCTTGT+TGG - chr7_4:29560858-29560877 None:intergenic 55.0%
TTTGGTACCGCCGCAGAAAG+CGG + chr7_4:29561578-29561597 Msa1148930:CDS 55.0%
! CGGTTGGCTGATTGTGCCAT+TGG + chr7_4:29561598-29561617 Msa1148930:CDS 55.0%
AATGCTATCGGTGGCCGTGA+CGG + chr7_4:29561631-29561650 Msa1148930:CDS 55.0%
AGTGCCAGGTCTTGGGTTCA+CGG - chr7_4:29561695-29561714 None:intergenic 55.0%
! CGTAGCTCCCCTTCCCATTT+TGG + chr7_4:29561943-29561962 Msa1148930:CDS 55.0%
! GCTCCCCTTCCCATTTTGGA+TGG + chr7_4:29561947-29561966 Msa1148930:CDS 55.0%
! CCCCTTCCCATTTTGGATGG+AGG + chr7_4:29561950-29561969 Msa1148930:CDS 55.0%
GGATGGAGGACAATGGCTGA+TGG + chr7_4:29561964-29561983 Msa1148930:CDS 55.0%
CTACTTCACCCACCACAACG+AGG + chr7_4:29562107-29562126 Msa1148930:CDS 55.0%
!! AGAGGTCCCTCTGAGACACT+AGG - chr7_4:29562579-29562598 None:intergenic 55.0%
! GGGCAAGGTATCTGTTGCCT+TGG - chr7_4:29562784-29562803 None:intergenic 55.0%
!! CAAAAGGGTTCTGAGGGGCA+AGG - chr7_4:29562799-29562818 None:intergenic 55.0%
TGGACAGGTGACAAAGAGGG+TGG + chr7_4:29562920-29562939 Msa1148930:intron 55.0%
GGTTGGAATTGGAGGTCCGA+GGG + chr7_4:29562966-29562985 Msa1148930:CDS 55.0%
! GACTGGTGGGTCGGTCATGT+GGG - chr7_4:29561212-29561231 None:intergenic 60.0%
! AGACTGGTGGGTCGGTCATG+TGG - chr7_4:29561213-29561232 None:intergenic 60.0%
! GAGGGATGAGACTGGTGGGT+CGG - chr7_4:29561221-29561240 None:intergenic 60.0%
CAGCGCCAGCAGTCATCCAT+TGG - chr7_4:29561550-29561569 None:intergenic 60.0%
GCTGGCGCTGTGACAAGCTT+TGG + chr7_4:29561560-29561579 Msa1148930:CDS 60.0%
TCACGGGGTCGTCGTCTCTT+GGG - chr7_4:29561678-29561697 None:intergenic 60.0%
TTCACGGGGTCGTCGTCTCT+TGG - chr7_4:29561679-29561698 None:intergenic 60.0%
TGCCAGGTCTTGGGTTCACG+GGG - chr7_4:29561693-29561712 None:intergenic 60.0%
GTGCCAGGTCTTGGGTTCAC+GGG - chr7_4:29561694-29561713 None:intergenic 60.0%
!! GACGGAGAGTGCCAGGTCTT+GGG - chr7_4:29561702-29561721 None:intergenic 60.0%
!! TGACGGAGAGTGCCAGGTCT+TGG - chr7_4:29561703-29561722 None:intergenic 60.0%
GGTCCGGAGTATGGAAGGGT+TGG + chr7_4:29562949-29562968 Msa1148930:CDS 60.0%
GGGTTGGAATTGGAGGTCCG+AGG + chr7_4:29562965-29562984 Msa1148930:CDS 60.0%
GCTGCAGCTCCTCTTCCTGA+TGG - chr7_4:29563023-29563042 None:intergenic 60.0%
GTACCGCCGCAGAAAGCGGT+TGG + chr7_4:29561582-29561601 Msa1148930:CDS 65.0%
CAGCCAACCGCTTTCTGCGG+CGG - chr7_4:29561588-29561607 None:intergenic 65.0%
! CTATCGGTGGCCGTGACGGA+AGG + chr7_4:29561635-29561654 Msa1148930:CDS 65.0%
GACCCCGTGAACCCAAGACC+TGG + chr7_4:29561688-29561707 Msa1148930:CDS 65.0%
!! ACGGCGTGACGGAGAGTGCC+AGG - chr7_4:29561709-29561728 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 29557948 29563733 29557948 ID=Msa1148930;Name=Msa1148930
chr7_4 mRNA 29557948 29563733 29557948 ID=Msa1148930-mRNA-1;Parent=Msa1148930;Name=Msa1148930-mRNA-1;_AED=0.06;_eAED=0.06;_QI=78|1|1|1|0.85|0.75|8|565|444
chr7_4 exon 29557948 29558120 29557948 ID=Msa1148930-mRNA-1:exon:7261;Parent=Msa1148930-mRNA-1
chr7_4 exon 29558271 29558333 29558271 ID=Msa1148930-mRNA-1:exon:7262;Parent=Msa1148930-mRNA-1
chr7_4 exon 29558600 29558668 29558600 ID=Msa1148930-mRNA-1:exon:7263;Parent=Msa1148930-mRNA-1
chr7_4 exon 29561486 29562128 29561486 ID=Msa1148930-mRNA-1:exon:7264;Parent=Msa1148930-mRNA-1
chr7_4 exon 29562290 29562393 29562290 ID=Msa1148930-mRNA-1:exon:7265;Parent=Msa1148930-mRNA-1
chr7_4 exon 29562688 29562826 29562688 ID=Msa1148930-mRNA-1:exon:7266;Parent=Msa1148930-mRNA-1
chr7_4 exon 29562927 29563588 29562927 ID=Msa1148930-mRNA-1:exon:7267;Parent=Msa1148930-mRNA-1
chr7_4 exon 29563609 29563733 29563609 ID=Msa1148930-mRNA-1:exon:7268;Parent=Msa1148930-mRNA-1
chr7_4 five_prime_UTR 29557948 29558025 29557948 ID=Msa1148930-mRNA-1:five_prime_utr;Parent=Msa1148930-mRNA-1
chr7_4 CDS 29558026 29558120 29558026 ID=Msa1148930-mRNA-1:cds;Parent=Msa1148930-mRNA-1
chr7_4 CDS 29558271 29558333 29558271 ID=Msa1148930-mRNA-1:cds;Parent=Msa1148930-mRNA-1
chr7_4 CDS 29558600 29558668 29558600 ID=Msa1148930-mRNA-1:cds;Parent=Msa1148930-mRNA-1
chr7_4 CDS 29561486 29562128 29561486 ID=Msa1148930-mRNA-1:cds;Parent=Msa1148930-mRNA-1
chr7_4 CDS 29562290 29562393 29562290 ID=Msa1148930-mRNA-1:cds;Parent=Msa1148930-mRNA-1
chr7_4 CDS 29562688 29562826 29562688 ID=Msa1148930-mRNA-1:cds;Parent=Msa1148930-mRNA-1
chr7_4 CDS 29562927 29563148 29562927 ID=Msa1148930-mRNA-1:cds;Parent=Msa1148930-mRNA-1
chr7_4 three_prime_UTR 29563149 29563588 29563149 ID=Msa1148930-mRNA-1:three_prime_utr;Parent=Msa1148930-mRNA-1
chr7_4 three_prime_UTR 29563609 29563733 29563609 ID=Msa1148930-mRNA-1:three_prime_utr;Parent=Msa1148930-mRNA-1
Gene Sequence

>Msa1148930

ATGGAGTTACGGTTTTCATCACAGTTCGTTTTCACCATTCTCGCTATCACGCTTCTTTTTGCTTTCACCAATGCTATTGATCATAACGACTCAAGTGTTGTGAATGGAGAAGAGAAGTTGAAGATGCAGAGCTTGAATAATTCATCAATGGCGGAAAGCTTAAGTAATGGTGCTATCAACGAGCATGCAGTTGATAATCCAGAGGAGATTGCTTCCATGGTTGATACGACTATACGCAATCACACGGAGAGAAGGAGTCTGAGTTTTTTCTCATGTGGGACTGGAAATCCAATGGATGACTGCTGGCGCTGTGACAAGCTTTGGTACCGCCGCAGAAAGCGGTTGGCTGATTGTGCCATTGGTTTTGGTCGCAATGCTATCGGTGGCCGTGACGGAAGGTACTACGTTGTGAATAACCCAAGAGACGACGACCCCGTGAACCCAAGACCTGGCACTCTCCGTCACGCCGTCATTCAAGATAGGCCATTGTGGATTGTGTTCAAGAGAGACATGGTGATCACCCTGAAGCAAGAATTGATCATGAACAGTTTCAAGACCATAGATGGTCGTGGTGCCAATGTTCATATTGCCTTTGGAGCATGCATTACTATTCAATTTATCACCAATGTCATCATCCATGGTGTCCATATCCATGATTGTAAGCCGACTGGGAATGCTATGGTTCGTAGCTCCCCTTCCCATTTTGGATGGAGGACAATGGCTGATGGTGATGGCATTTCCATCTTTGGTTCCAGTCATATTTGGATTGATCACAACTCTCTGTCTAATTGCGCTGATGGTCTTGTTGATGCTATTATGGGATCCACCGCCATTACCGTTTCCAATAACTACTTCACCCACCACAACGAGGTTATGTTATTAGGTCACAGTGACTCATATGTACGTGACAAGCAGATGCAAGTAACCATTGCATACAACCATTTTGGGGAGGGTCTTATCCAAAGGATGCCAAGATGTAGACACGGGTATTTCCACGTGGTAAACAATGACTATACACATTGGGTGATGTATGCTATTGGAGGCAGCGCTGAACCCACAATTAACAGCCAAGGCAACAGATACCTTGCCCCTCAGAACCCTTTTGCCAAAGAGGTGACAAAGAGGGTGGATACAGGGTCCGGAGTATGGAAGGGTTGGAATTGGAGGTCCGAGGGAGACCTTTTGCTAAATGGAGCTTTTTTCACTCCATCAGGAAGAGGAGCTGCAGCAAGCTATGCTAGAGCCTCAAGTTTAGGGGCCAAATCATCTTCTTTAGTTGGTACTTTAACTGCAGGTGCTGGTGTTATTAAATGTCGCCGGGGTGGCATGTGTTAA
Protein sequence

>Msa1148930

MELRFSSQFVFTILAITLLFAFTNAIDHNDSSVVNGEEKLKMQSLNNSSMAESLSNGAINEHAVDNPEEIASMVDTTIRNHTERRSLSFFSCGTGNPMDDCWRCDKLWYRRRKRLADCAIGFGRNAIGGRDGRYYVVNNPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHIAFGACITIQFITNVIIHGVHIHDCKPTGNAMVRSSPSHFGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSAEPTINSQGNRYLAPQNPFAKEVTKRVDTGSGVWKGWNWRSEGDLLLNGAFFTPSGRGAAASYARASSLGAKSSSLVGTLTAGAGVIKCRRGGMC*