Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528310 | XP_013454758.1 | 96.166 | 313 | 12 | 0 | 1 | 313 | 1 | 313 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528310 | sp|Q65CJ7|HPPR_PLESU | 72.843 | 313 | 85 | 0 | 1 | 313 | 1 | 313 | 4.17e-168 | 472 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528310 | A0A072UGC3 | 96.166 | 313 | 12 | 0 | 1 | 313 | 1 | 313 | 0.0 | 615 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0528310 | 0.800063 | 1.717769e-48 | -8.615850e-47 |
| Msa0006840 | Msa0528310 | 0.825365 | 4.876760e-54 | -8.615850e-47 |
| Msa0007810 | Msa0528310 | -0.801522 | 8.654348e-49 | -8.615850e-47 |
| Msa0011060 | Msa0528310 | -0.812924 | 3.319549e-51 | -8.615850e-47 |
| Msa0011100 | Msa0528310 | -0.818203 | 2.215068e-52 | -8.615850e-47 |
| Msa0013270 | Msa0528310 | 0.805219 | 1.483687e-49 | -8.615850e-47 |
| Msa0016380 | Msa0528310 | -0.818382 | 2.018006e-52 | -8.615850e-47 |
| Msa0017710 | Msa0528310 | 0.847903 | 8.612479e-60 | -8.615850e-47 |
| Msa0030760 | Msa0528310 | -0.806622 | 7.523976e-50 | -8.615850e-47 |
| Msa0033120 | Msa0528310 | 0.805006 | 1.643682e-49 | -8.615850e-47 |
| Msa0036810 | Msa0528310 | 0.831402 | 1.703592e-55 | -8.615850e-47 |
| Msa0039750 | Msa0528310 | 0.821133 | 4.747386e-53 | -8.615850e-47 |
| Msa0040930 | Msa0528310 | 0.805003 | 1.646538e-49 | -8.615850e-47 |
| Msa0042240 | Msa0528310 | -0.803180 | 3.942752e-49 | -8.615850e-47 |
| Msa0045620 | Msa0528310 | 0.845551 | 3.785710e-59 | -8.615850e-47 |
| Msa0050530 | Msa0528310 | 0.846947 | 1.576980e-59 | -8.615850e-47 |
| Msa0056230 | Msa0528310 | -0.806841 | 6.763148e-50 | -8.615850e-47 |
| Msa0072390 | Msa0528310 | -0.813164 | 2.939375e-51 | -8.615850e-47 |
| Msa0073270 | Msa0528310 | 0.831440 | 1.667623e-55 | -8.615850e-47 |
| Msa0075840 | Msa0528310 | 0.804940 | 1.697457e-49 | -8.615850e-47 |
| Msa0078160 | Msa0528310 | -0.806157 | 9.429032e-50 | -8.615850e-47 |
| Msa0078170 | Msa0528310 | -0.804301 | 2.306605e-49 | -8.615850e-47 |
| Msa0085690 | Msa0528310 | -0.814362 | 1.601387e-51 | -8.615850e-47 |
| Msa0089470 | Msa0528310 | -0.828446 | 8.949623e-55 | -8.615850e-47 |
| Msa0089540 | Msa0528310 | 0.833780 | 4.380553e-56 | -8.615850e-47 |
| Msa0091090 | Msa0528310 | -0.802992 | 4.311767e-49 | -8.615850e-47 |
| Msa0094560 | Msa0528310 | 0.802295 | 6.003661e-49 | -8.615850e-47 |
| Msa0094900 | Msa0528310 | -0.805131 | 1.547719e-49 | -8.615850e-47 |
| Msa0100600 | Msa0528310 | 0.845606 | 3.656559e-59 | -8.615850e-47 |
| Msa0100890 | Msa0528310 | 0.844508 | 7.240384e-59 | -8.615850e-47 |
| Msa0102920 | Msa0528310 | 0.807486 | 4.936755e-50 | -8.615850e-47 |
| Msa0105590 | Msa0528310 | -0.800075 | 1.708353e-48 | -8.615850e-47 |
| Msa0106540 | Msa0528310 | 0.817424 | 3.321529e-52 | -8.615850e-47 |
| Msa0121320 | Msa0528310 | 0.811373 | 7.231987e-51 | -8.615850e-47 |
| Msa0122170 | Msa0528310 | -0.805001 | 1.647647e-49 | -8.615850e-47 |
| Msa0132080 | Msa0528310 | -0.847943 | 8.397107e-60 | -8.615850e-47 |
| Msa0147680 | Msa0528310 | 0.816838 | 4.497741e-52 | -8.615850e-47 |
| Msa0164170 | Msa0528310 | 0.817089 | 3.951876e-52 | -8.615850e-47 |
| Msa0166180 | Msa0528310 | 0.818687 | 1.721298e-52 | -8.615850e-47 |
| Msa0168380 | Msa0528310 | 0.832100 | 1.146330e-55 | -8.615850e-47 |
| Msa0178440 | Msa0528310 | -0.829520 | 4.916634e-55 | -8.615850e-47 |
| Msa0180100 | Msa0528310 | -0.815551 | 8.722427e-52 | -8.615850e-47 |
| Msa0180210 | Msa0528310 | 0.818785 | 1.635328e-52 | -8.615850e-47 |
| Msa0184510 | Msa0528310 | -0.802030 | 6.807764e-49 | -8.615850e-47 |
| Msa0192050 | Msa0528310 | 0.802327 | 5.914111e-49 | -8.615850e-47 |
| Msa0195140 | Msa0528310 | -0.806404 | 8.364587e-50 | -8.615850e-47 |
| Msa0196260 | Msa0528310 | 0.802414 | 5.673469e-49 | -8.615850e-47 |
| Msa0206370 | Msa0528310 | 0.810614 | 1.056186e-50 | -8.615850e-47 |
| Msa0208040 | Msa0528310 | -0.818802 | 1.621058e-52 | -8.615850e-47 |
| Msa0209370 | Msa0528310 | -0.821725 | 3.465460e-53 | -8.615850e-47 |
| Msa0210790 | Msa0528310 | 0.815152 | 1.070283e-51 | -8.615850e-47 |
| Msa0210850 | Msa0528310 | 0.801922 | 7.162789e-49 | -8.615850e-47 |
| Msa0211460 | Msa0528310 | 0.824993 | 5.971423e-54 | -8.615850e-47 |
| Msa0219840 | Msa0528310 | 0.828542 | 8.486262e-55 | -8.615850e-47 |
| Msa0221460 | Msa0528310 | -0.841770 | 3.884791e-58 | -8.615850e-47 |
| Msa0225070 | Msa0528310 | -0.836250 | 1.044397e-56 | -8.615850e-47 |
| Msa0227970 | Msa0528310 | -0.807097 | 5.968677e-50 | -8.615850e-47 |
| Msa0229350 | Msa0528310 | -0.803659 | 3.136332e-49 | -8.615850e-47 |
| Msa0234170 | Msa0528310 | 0.818075 | 2.368346e-52 | -8.615850e-47 |
| Msa0235080 | Msa0528310 | 0.807051 | 6.106187e-50 | -8.615850e-47 |
| Msa0364910 | Msa0528310 | -0.813344 | 2.683669e-51 | -8.615850e-47 |
| Msa0367590 | Msa0528310 | -0.844152 | 9.023518e-59 | -8.615850e-47 |
| Msa0368630 | Msa0528310 | 0.820068 | 8.337820e-53 | -8.615850e-47 |
| Msa0371350 | Msa0528310 | -0.808876 | 2.496291e-50 | -8.615850e-47 |
| Msa0375570 | Msa0528310 | -0.808915 | 2.448751e-50 | -8.615850e-47 |
| Msa0385030 | Msa0528310 | 0.822738 | 2.017014e-53 | -8.615850e-47 |
| Msa0388250 | Msa0528310 | 0.812176 | 4.836124e-51 | -8.615850e-47 |
| Msa0389700 | Msa0528310 | 0.807269 | 5.490508e-50 | -8.615850e-47 |
| Msa0403740 | Msa0528310 | -0.821168 | 4.661116e-53 | -8.615850e-47 |
| Msa0412580 | Msa0528310 | -0.818762 | 1.655158e-52 | -8.615850e-47 |
| Msa0416030 | Msa0528310 | 0.806513 | 7.930648e-50 | -8.615850e-47 |
| Msa0416210 | Msa0528310 | 0.821513 | 3.879284e-53 | -8.615850e-47 |
| Msa0417850 | Msa0528310 | -0.813228 | 2.845801e-51 | -8.615850e-47 |
| Msa0419420 | Msa0528310 | -0.821423 | 4.069896e-53 | -8.615850e-47 |
| Msa0422690 | Msa0528310 | 0.834851 | 2.359238e-56 | -8.615850e-47 |
| Msa0422820 | Msa0528310 | 0.842969 | 1.868883e-58 | -8.615850e-47 |
| Msa0422900 | Msa0528310 | 0.847592 | 1.049268e-59 | -8.615850e-47 |
| Msa0424220 | Msa0528310 | -0.809149 | 2.182770e-50 | -8.615850e-47 |
| Msa0427260 | Msa0528310 | -0.820597 | 6.305081e-53 | -8.615850e-47 |
| Msa0428300 | Msa0528310 | -0.810365 | 1.195457e-50 | -8.615850e-47 |
| Msa0429970 | Msa0528310 | 0.818450 | 1.948309e-52 | -8.615850e-47 |
| Msa0433630 | Msa0528310 | 0.829034 | 6.451614e-55 | -8.615850e-47 |
| Msa0435280 | Msa0528310 | 0.811958 | 5.395894e-51 | -8.615850e-47 |
| Msa0436100 | Msa0528310 | 0.820536 | 6.511422e-53 | -8.615850e-47 |
| Msa0456450 | Msa0528310 | -0.819636 | 1.046476e-52 | -8.615850e-47 |
| Msa0457070 | Msa0528310 | -0.827706 | 1.349199e-54 | -8.615850e-47 |
| Msa0460220 | Msa0528310 | -0.815428 | 9.290152e-52 | -8.615850e-47 |
| Msa0467170 | Msa0528310 | 0.809594 | 1.751494e-50 | -8.615850e-47 |
| Msa0467330 | Msa0528310 | 0.810998 | 8.720931e-51 | -8.615850e-47 |
| Msa0469060 | Msa0528310 | 0.850721 | 1.413584e-60 | -8.615850e-47 |
| Msa0471130 | Msa0528310 | -0.806475 | 8.079687e-50 | -8.615850e-47 |
| Msa0477480 | Msa0528310 | 0.810426 | 1.159461e-50 | -8.615850e-47 |
| Msa0479480 | Msa0528310 | 0.828002 | 1.145385e-54 | -8.615850e-47 |
| Msa0480270 | Msa0528310 | 0.820308 | 7.346725e-53 | -8.615850e-47 |
| Msa0238960 | Msa0528310 | -0.805852 | 1.092865e-49 | -8.615850e-47 |
| Msa0240590 | Msa0528310 | -0.836326 | 9.992710e-57 | -8.615850e-47 |
| Msa0244820 | Msa0528310 | -0.841711 | 4.026007e-58 | -8.615850e-47 |
| Msa0251120 | Msa0528310 | 0.812801 | 3.531014e-51 | -8.615850e-47 |
| Msa0260980 | Msa0528310 | 0.835842 | 1.326208e-56 | -8.615850e-47 |
| Msa0266140 | Msa0528310 | -0.811828 | 5.758306e-51 | -8.615850e-47 |
| Msa0267450 | Msa0528310 | -0.848809 | 4.838154e-60 | -8.615850e-47 |
| Msa0267510 | Msa0528310 | -0.846019 | 2.825478e-59 | -8.615850e-47 |
| Msa0269220 | Msa0528310 | -0.802273 | 6.065498e-49 | -8.615850e-47 |
| Msa0276800 | Msa0528310 | -0.841981 | 3.417498e-58 | -8.615850e-47 |
| Msa0278480 | Msa0528310 | 0.818253 | 2.159071e-52 | -8.615850e-47 |
| Msa0279090 | Msa0528310 | -0.810255 | 1.262648e-50 | -8.615850e-47 |
| Msa0279810 | Msa0528310 | 0.818657 | 1.748276e-52 | -8.615850e-47 |
| Msa0288400 | Msa0528310 | 0.839413 | 1.608109e-57 | -8.615850e-47 |
| Msa0290800 | Msa0528310 | 0.834192 | 3.455453e-56 | -8.615850e-47 |
| Msa0300670 | Msa0528310 | -0.852722 | 3.830076e-61 | -8.615850e-47 |
| Msa0304060 | Msa0528310 | -0.816740 | 4.733128e-52 | -8.615850e-47 |
| Msa0307430 | Msa0528310 | 0.840333 | 9.263276e-58 | -8.615850e-47 |
| Msa0307630 | Msa0528310 | 0.807530 | 4.833104e-50 | -8.615850e-47 |
| Msa0316000 | Msa0528310 | 0.829777 | 4.257863e-55 | -8.615850e-47 |
| Msa0316720 | Msa0528310 | -0.830966 | 2.180471e-55 | -8.615850e-47 |
| Msa0319220 | Msa0528310 | 0.816503 | 5.348156e-52 | -8.615850e-47 |
| Msa0328870 | Msa0528310 | 0.822985 | 1.766882e-53 | -8.615850e-47 |
| Msa0331070 | Msa0528310 | -0.814644 | 1.387244e-51 | -8.615850e-47 |
| Msa0336430 | Msa0528310 | 0.814549 | 1.455840e-51 | -8.615850e-47 |
| Msa0336520 | Msa0528310 | 0.822239 | 2.634877e-53 | -8.615850e-47 |
| Msa0337760 | Msa0528310 | -0.837515 | 4.967619e-57 | -8.615850e-47 |
| Msa0342220 | Msa0528310 | 0.834072 | 3.702946e-56 | -8.615850e-47 |
| Msa0349930 | Msa0528310 | 0.835075 | 2.072644e-56 | -8.615850e-47 |
| Msa0364030 | Msa0528310 | -0.821116 | 4.791634e-53 | -8.615850e-47 |
| Msa0491770 | Msa0528310 | 0.801372 | 9.287583e-49 | -8.615850e-47 |
| Msa0506750 | Msa0528310 | 0.828138 | 1.062162e-54 | -8.615850e-47 |
| Msa0519070 | Msa0528310 | -0.805463 | 1.318582e-49 | -8.615850e-47 |
| Msa0521510 | Msa0528310 | 0.827456 | 1.549216e-54 | -8.615850e-47 |
| Msa0521530 | Msa0528310 | 0.819534 | 1.104512e-52 | -8.615850e-47 |
| Msa0525180 | Msa0528310 | -0.808617 | 2.836221e-50 | -8.615850e-47 |
| Msa0528310 | Msa0530660 | 0.813338 | 2.692450e-51 | -8.615850e-47 |
| Msa0528310 | Msa0538050 | -0.821901 | 3.155472e-53 | -8.615850e-47 |
| Msa0528310 | Msa0541880 | 0.817250 | 3.634741e-52 | -8.615850e-47 |
| Msa0528310 | Msa0541940 | 0.816797 | 4.594921e-52 | -8.615850e-47 |
| Msa0528310 | Msa0549870 | 0.817488 | 3.213147e-52 | -8.615850e-47 |
| Msa0528310 | Msa0566460 | 0.817115 | 3.898020e-52 | -8.615850e-47 |
| Msa0528310 | Msa0568460 | -0.817497 | 3.197455e-52 | -8.615850e-47 |
| Msa0528310 | Msa0572360 | 0.805432 | 1.338441e-49 | -8.615850e-47 |
| Msa0528310 | Msa0576500 | -0.818833 | 1.594753e-52 | -8.615850e-47 |
| Msa0528310 | Msa0582270 | -0.801040 | 1.086229e-48 | -8.615850e-47 |
| Msa0528310 | Msa0582460 | 0.809891 | 1.512543e-50 | -8.615850e-47 |
| Msa0528310 | Msa0584970 | 0.808250 | 3.395867e-50 | -8.615850e-47 |
| Msa0528310 | Msa0585720 | -0.813885 | 2.041008e-51 | -8.615850e-47 |
| Msa0528310 | Msa0587180 | 0.830982 | 2.160942e-55 | -8.615850e-47 |
| Msa0528310 | Msa0588500 | 0.943083 | 2.278928e-102 | -8.615850e-47 |
| Msa0528310 | Msa0605520 | 0.827290 | 1.697657e-54 | -8.615850e-47 |
| Msa0528310 | Msa0608780 | -0.800466 | 1.422549e-48 | -8.615850e-47 |
| Msa0528310 | Msa0608820 | 0.801566 | 8.474739e-49 | -8.615850e-47 |
| Msa0528310 | Msa0612880 | -0.842141 | 3.099007e-58 | -8.615850e-47 |
| Msa0528310 | Msa0618990 | 0.808850 | 2.528658e-50 | -8.615850e-47 |
| Msa0528310 | Msa0619300 | 0.814522 | 1.476132e-51 | -8.615850e-47 |
| Msa0528310 | Msa0619390 | -0.800079 | 1.705580e-48 | -8.615850e-47 |
| Msa0528310 | Msa0623310 | 0.837686 | 4.489675e-57 | -8.615850e-47 |
| Msa0528310 | Msa0623980 | 0.808623 | 2.827750e-50 | -8.615850e-47 |
| Msa0528310 | Msa0625900 | -0.813735 | 2.202133e-51 | -8.615850e-47 |
| Msa0528310 | Msa0626980 | 0.806111 | 9.639413e-50 | -8.615850e-47 |
| Msa0528310 | Msa0627360 | 0.812576 | 3.955012e-51 | -8.615850e-47 |
| Msa0528310 | Msa0634900 | -0.807826 | 4.181507e-50 | -8.615850e-47 |
| Msa0528310 | Msa0646260 | 0.812541 | 4.024943e-51 | -8.615850e-47 |
| Msa0528310 | Msa0649250 | -0.804396 | 2.204280e-49 | -8.615850e-47 |
| Msa0528310 | Msa0658120 | 0.804350 | 2.253352e-49 | -8.615850e-47 |
| Msa0528310 | Msa0659020 | -0.843642 | 1.235733e-58 | -8.615850e-47 |
| Msa0528310 | Msa0660070 | -0.801189 | 1.012375e-48 | -8.615850e-47 |
| Msa0528310 | Msa0661480 | 0.819633 | 1.048537e-52 | -8.615850e-47 |
| Msa0528310 | Msa0663290 | 0.827804 | 1.278112e-54 | -8.615850e-47 |
| Msa0528310 | Msa0663690 | -0.811984 | 5.324618e-51 | -8.615850e-47 |
| Msa0528310 | Msa0664070 | 0.827256 | 1.730140e-54 | -8.615850e-47 |
| Msa0528310 | Msa0673940 | 0.831080 | 2.044785e-55 | -8.615850e-47 |
| Msa0528310 | Msa0685390 | -0.832360 | 9.884625e-56 | -8.615850e-47 |
| Msa0528310 | Msa0685610 | 0.820415 | 6.944506e-53 | -8.615850e-47 |
| Msa0528310 | Msa0689830 | 0.820176 | 7.876258e-53 | -8.615850e-47 |
| Msa0528310 | Msa0691740 | -0.801447 | 8.965669e-49 | -8.615850e-47 |
| Msa0528310 | Msa0701800 | -0.802200 | 6.280869e-49 | -8.615850e-47 |
| Msa0528310 | Msa0702360 | -0.800223 | 1.594089e-48 | -8.615850e-47 |
| Msa0528310 | Msa0702690 | -0.818348 | 2.054888e-52 | -8.615850e-47 |
| Msa0528310 | Msa0702970 | 0.804856 | 1.766681e-49 | -8.615850e-47 |
| Msa0528310 | Msa0704690 | 0.836346 | 9.877804e-57 | -8.615850e-47 |
| Msa0528310 | Msa0705520 | 0.802148 | 6.437401e-49 | -8.615850e-47 |
| Msa0528310 | Msa0705810 | -0.812302 | 4.538918e-51 | -8.615850e-47 |
| Msa0528310 | Msa0706130 | -0.812845 | 3.453563e-51 | -8.615850e-47 |
| Msa0528310 | Msa0707880 | -0.814803 | 1.279126e-51 | -8.615850e-47 |
| Msa0528310 | Msa0708020 | 0.802340 | 5.875846e-49 | -8.615850e-47 |
| Msa0528310 | Msa0715350 | 0.800094 | 1.693182e-48 | -8.615850e-47 |
| Msa0528310 | Msa0720130 | -0.812171 | 4.848474e-51 | -8.615850e-47 |
| Msa0528310 | Msa0726520 | 0.801760 | 7.732146e-49 | -8.615850e-47 |
| Msa0528310 | Msa0732970 | 0.845451 | 4.028028e-59 | -8.615850e-47 |
| Msa0528310 | Msa0733240 | -0.823541 | 1.310288e-53 | -8.615850e-47 |
| Msa0528310 | Msa0745140 | 0.803968 | 2.705560e-49 | -8.615850e-47 |
| Msa0528310 | Msa0751720 | 0.848546 | 5.720427e-60 | -8.615850e-47 |
| Msa0528310 | Msa0761830 | 0.856620 | 2.844366e-62 | -8.615850e-47 |
| Msa0528310 | Msa0769910 | -0.811814 | 5.798750e-51 | -8.615850e-47 |
| Msa0528310 | Msa0773960 | 0.836127 | 1.122400e-56 | -8.615850e-47 |
| Msa0528310 | Msa0775220 | 0.831281 | 1.824699e-55 | -8.615850e-47 |
| Msa0528310 | Msa0776640 | 0.805731 | 1.158621e-49 | -8.615850e-47 |
| Msa0528310 | Msa0792410 | 0.805077 | 1.588399e-49 | -8.615850e-47 |
| Msa0528310 | Msa0802950 | -0.835157 | 1.975295e-56 | -8.615850e-47 |
| Msa0528310 | Msa0804170 | 0.858290 | 9.119750e-63 | -8.615850e-47 |
| Msa0528310 | Msa0812020 | -0.812200 | 4.777883e-51 | -8.615850e-47 |
| Msa0528310 | Msa0812610 | 0.809471 | 1.861847e-50 | -8.615850e-47 |
| Msa0528310 | Msa0822740 | 0.811275 | 7.595953e-51 | -8.615850e-47 |
| Msa0528310 | Msa0825920 | 0.809972 | 1.452881e-50 | -8.615850e-47 |
| Msa0528310 | Msa0831820 | 0.813299 | 2.745586e-51 | -8.615850e-47 |
| Msa0528310 | Msa0842180 | 0.852537 | 4.325350e-61 | -8.615850e-47 |
| Msa0528310 | Msa0846900 | 0.832240 | 1.058032e-55 | -8.615850e-47 |
| Msa0528310 | Msa0847140 | 0.807367 | 5.233976e-50 | -8.615850e-47 |
| Msa0528310 | Msa0852090 | -0.813779 | 2.153074e-51 | -8.615850e-47 |
| Msa0528310 | Msa0852890 | 0.800924 | 1.147051e-48 | -8.615850e-47 |
| Msa0528310 | Msa0861400 | -0.801149 | 1.031673e-48 | -8.615850e-47 |
| Msa0528310 | Msa0871420 | 0.825656 | 4.161441e-54 | -8.615850e-47 |
| Msa0528310 | Msa0900830 | 0.805649 | 1.205809e-49 | -8.615850e-47 |
| Msa0528310 | Msa0903460 | -0.802973 | 4.351152e-49 | -8.615850e-47 |
| Msa0528310 | Msa0906100 | -0.827066 | 1.920581e-54 | -8.615850e-47 |
| Msa0528310 | Msa0913520 | 0.801608 | 8.307850e-49 | -8.615850e-47 |
| Msa0528310 | Msa0935930 | -0.802358 | 5.827324e-49 | -8.615850e-47 |
| Msa0528310 | Msa0936630 | 0.803092 | 4.110805e-49 | -8.615850e-47 |
| Msa0528310 | Msa0938150 | -0.814096 | 1.832992e-51 | -8.615850e-47 |
| Msa0528310 | Msa0941150 | -0.817231 | 3.670470e-52 | -8.615850e-47 |
| Msa0528310 | Msa0967900 | -0.834984 | 2.184022e-56 | -8.615850e-47 |
| Msa0528310 | Msa0970100 | 0.803199 | 3.907141e-49 | -8.615850e-47 |
| Msa0528310 | Msa0978980 | 0.804990 | 1.656474e-49 | -8.615850e-47 |
| Msa0528310 | Msa0981670 | 0.820528 | 6.542078e-53 | -8.615850e-47 |
| Msa0528310 | Msa0991630 | 0.815168 | 1.061258e-51 | -8.615850e-47 |
| Msa0528310 | Msa0998660 | -0.803331 | 3.668823e-49 | -8.615850e-47 |
| Msa0528310 | Msa1003110 | 0.805667 | 1.194949e-49 | -8.615850e-47 |
| Msa0528310 | Msa1008850 | 0.812802 | 3.529422e-51 | -8.615850e-47 |
| Msa0528310 | Msa1014550 | -0.805002 | 1.647147e-49 | -8.615850e-47 |
| Msa0528310 | Msa1021560 | 0.806846 | 6.747539e-50 | -8.615850e-47 |
| Msa0528310 | Msa1025200 | 0.803544 | 3.313862e-49 | -8.615850e-47 |
| Msa0528310 | Msa1025440 | -0.804578 | 2.019369e-49 | -8.615850e-47 |
| Msa0528310 | Msa1026710 | 0.852312 | 5.012989e-61 | -8.615850e-47 |
| Msa0528310 | Msa1036260 | -0.801833 | 7.472471e-49 | -8.615850e-47 |
| Msa0528310 | Msa1039150 | -0.812401 | 4.319659e-51 | -8.615850e-47 |
| Msa0528310 | Msa1050260 | 0.823925 | 1.065079e-53 | -8.615850e-47 |
| Msa0528310 | Msa1070630 | -0.808488 | 3.021617e-50 | -8.615850e-47 |
| Msa0528310 | Msa1078210 | -0.813112 | 3.018795e-51 | -8.615850e-47 |
| Msa0528310 | Msa1078590 | -0.811169 | 8.006378e-51 | -8.615850e-47 |
| Msa0528310 | Msa1078600 | -0.810558 | 1.086101e-50 | -8.615850e-47 |
| Msa0528310 | Msa1078760 | -0.806482 | 8.053843e-50 | -8.615850e-47 |
| Msa0528310 | Msa1078770 | -0.804665 | 1.936822e-49 | -8.615850e-47 |
| Msa0528310 | Msa1083630 | 0.819073 | 1.406370e-52 | -8.615850e-47 |
| Msa0528310 | Msa1083660 | -0.802747 | 4.844651e-49 | -8.615850e-47 |
| Msa0528310 | Msa1088740 | -0.801855 | 7.396019e-49 | -8.615850e-47 |
| Msa0528310 | Msa1093190 | -0.832519 | 9.023693e-56 | -8.615850e-47 |
| Msa0528310 | Msa1122710 | -0.812561 | 3.985561e-51 | -8.615850e-47 |
| Msa0528310 | Msa1123440 | -0.811836 | 5.736363e-51 | -8.615850e-47 |
| Msa0528310 | Msa1124210 | 0.811690 | 6.170268e-51 | -8.615850e-47 |
| Msa0528310 | Msa1127200 | 0.812910 | 3.342068e-51 | -8.615850e-47 |
| Msa0528310 | Msa1128620 | 0.800221 | 1.595692e-48 | -8.615850e-47 |
| Msa0528310 | Msa1130770 | 0.818576 | 1.823640e-52 | -8.615850e-47 |
| Msa0528310 | Msa1133860 | 0.804877 | 1.749705e-49 | -8.615850e-47 |
| Msa0528310 | Msa1146980 | 0.815629 | 8.382888e-52 | -8.615850e-47 |
| Msa0528310 | Msa1156430 | -0.806517 | 7.915931e-50 | -8.615850e-47 |
| Msa0528310 | Msa1162360 | 0.811661 | 6.261425e-51 | -8.615850e-47 |
| Msa0528310 | Msa1164830 | -0.822486 | 2.308922e-53 | -8.615850e-47 |
| Msa0528310 | Msa1165460 | 0.821386 | 4.151298e-53 | -8.615850e-47 |
| Msa0528310 | Msa1169600 | -0.805258 | 1.456134e-49 | -8.615850e-47 |
| Msa0528310 | Msa1170320 | 0.825832 | 3.780041e-54 | -8.615850e-47 |
| Msa0528310 | Msa1183910 | 0.812614 | 3.880122e-51 | -8.615850e-47 |
| Msa0528310 | Msa1186670 | 0.825763 | 3.926540e-54 | -8.615850e-47 |
| Msa0528310 | Msa1190350 | -0.823730 | 1.183296e-53 | -8.615850e-47 |
| Msa0528310 | Msa1191530 | -0.824422 | 8.141403e-54 | -8.615850e-47 |
| Msa0528310 | Msa1191960 | -0.806979 | 6.321705e-50 | -8.615850e-47 |
| Msa0528310 | Msa1194480 | -0.813077 | 3.071509e-51 | -8.615850e-47 |
| Msa0528310 | Msa1197720 | 0.808128 | 3.605723e-50 | -8.615850e-47 |
| Msa0528310 | Msa1205270 | -0.835990 | 1.216037e-56 | -8.615850e-47 |
| Msa0528310 | Msa1206040 | 0.807446 | 5.035490e-50 | -8.615850e-47 |
| Msa0528310 | Msa1209990 | -0.807474 | 4.966649e-50 | -8.615850e-47 |
| Msa0528310 | Msa1217890 | 0.840982 | 6.263484e-58 | -8.615850e-47 |
| Msa0528310 | Msa1220720 | 0.815280 | 1.002306e-51 | -8.615850e-47 |
| Msa0528310 | Msa1223620 | 0.800422 | 1.451725e-48 | -8.615850e-47 |
| Msa0528310 | Msa1228600 | -0.837368 | 5.418463e-57 | -8.615850e-47 |
| Msa0528310 | Msa1231490 | 0.801115 | 1.048408e-48 | -8.615850e-47 |
| Msa0528310 | Msa1240060 | 0.800910 | 1.154597e-48 | -8.615850e-47 |
| Msa0528310 | Msa1243630 | -0.813044 | 3.123130e-51 | -8.615850e-47 |
| Msa0528310 | Msa1244220 | -0.809364 | 1.962297e-50 | -8.615850e-47 |
| Msa0528310 | Msa1255030 | -0.822311 | 2.535179e-53 | -8.615850e-47 |
| Msa0528310 | Msa1265570 | 0.822116 | 2.814198e-53 | -8.615850e-47 |
| Msa0528310 | Msa1266120 | -0.846333 | 2.319435e-59 | -8.615850e-47 |
| Msa0528310 | Msa1281370 | 0.802510 | 5.422861e-49 | -8.615850e-47 |
| Msa0528310 | Msa1286860 | -0.817493 | 3.204774e-52 | -8.615850e-47 |
| Msa0528310 | Msa1288970 | -0.825229 | 5.251587e-54 | -8.615850e-47 |
| Msa0528310 | Msa1290090 | -0.818433 | 1.965252e-52 | -8.615850e-47 |
| Msa0528310 | Msa1295210 | -0.806265 | 8.947606e-50 | -8.615850e-47 |
| Msa0528310 | Msa1297220 | -0.844404 | 7.721470e-59 | -8.615850e-47 |
| Msa0528310 | Msa1298480 | -0.807706 | 4.434306e-50 | -8.615850e-47 |
| Msa0528310 | Msa1315500 | 0.806502 | 7.972171e-50 | -8.615850e-47 |
| Msa0528310 | Msa1321490 | 0.809579 | 1.764868e-50 | -8.615850e-47 |
| Msa0528310 | Msa1323260 | -0.839730 | 1.330493e-57 | -8.615850e-47 |
| Msa0528310 | Msa1328280 | 0.828275 | 9.839887e-55 | -8.615850e-47 |
| Msa0528310 | Msa1328870 | 0.811182 | 7.955144e-51 | -8.615850e-47 |
| Msa0528310 | Msa1334560 | 0.801809 | 7.557562e-49 | -8.615850e-47 |
| Msa0528310 | Msa1334670 | 0.825302 | 5.048233e-54 | -8.615850e-47 |
| Msa0528310 | Msa1342360 | -0.818356 | 2.045545e-52 | -8.615850e-47 |
| Msa0528310 | Msa1342760 | 0.835954 | 1.242027e-56 | -8.615850e-47 |
| Msa0528310 | Msa1343450 | -0.849820 | 2.528979e-60 | -8.615850e-47 |
| Msa0528310 | Msa1347610 | 0.823077 | 1.682268e-53 | -8.615850e-47 |
| Msa0528310 | Msa1352630 | -0.807051 | 6.103524e-50 | -8.615850e-47 |
| Msa0528310 | Msa1357860 | 0.800727 | 1.258271e-48 | -8.615850e-47 |
| Msa0528310 | Msa1361680 | 0.805286 | 1.436478e-49 | -8.615850e-47 |
| Msa0528310 | Msa1362590 | 0.812076 | 5.084848e-51 | -8.615850e-47 |
| Msa0528310 | Msa1365130 | -0.814586 | 1.428432e-51 | -8.615850e-47 |
| Msa0528310 | Msa1365230 | 0.822104 | 2.831795e-53 | -8.615850e-47 |
| Msa0528310 | Msa1366140 | -0.819338 | 1.223919e-52 | -8.615850e-47 |
| Msa0528310 | Msa1367900 | -0.820635 | 6.180204e-53 | -8.615850e-47 |
| Msa0528310 | Msa1369180 | -0.812202 | 4.773859e-51 | -8.615850e-47 |
| Msa0528310 | Msa1371800 | 0.849433 | 3.244232e-60 | -8.615850e-47 |
| Msa0528310 | Msa1372030 | 0.829888 | 3.999932e-55 | -8.615850e-47 |
| Msa0528310 | Msa1376310 | 0.845225 | 4.636499e-59 | -8.615850e-47 |
| Msa0528310 | Msa1379270 | -0.803897 | 2.799907e-49 | -8.615850e-47 |
| Msa0528310 | Msa1379940 | 0.823326 | 1.471324e-53 | -8.615850e-47 |
| Msa0528310 | Msa1381300 | -0.806664 | 7.369293e-50 | -8.615850e-47 |
| Msa0528310 | Msa1381330 | 0.817477 | 3.230889e-52 | -8.615850e-47 |
| Msa0528310 | Msa1384410 | -0.808467 | 3.053453e-50 | -8.615850e-47 |
| Msa0528310 | Msa1386320 | 0.815353 | 9.655595e-52 | -8.615850e-47 |
| Msa0528310 | Msa1387100 | -0.812563 | 3.980509e-51 | -8.615850e-47 |
| Msa0528310 | Msa1387450 | -0.808937 | 2.423390e-50 | -8.615850e-47 |
| Msa0528310 | Msa1395050 | 0.806263 | 8.956528e-50 | -8.615850e-47 |
| Msa0528310 | Msa1405830 | 0.815461 | 9.136535e-52 | -8.615850e-47 |
| Msa0528310 | Msa1407670 | 0.806339 | 8.631868e-50 | -8.615850e-47 |
| Msa0528310 | Msa1413020 | 0.862910 | 3.626608e-64 | -8.615850e-47 |
| Msa0528310 | Msa1420830 | 0.824011 | 1.017017e-53 | -8.615850e-47 |
| Msa0528310 | Msa1427600 | -0.818725 | 1.687330e-52 | -8.615850e-47 |
| Msa0528310 | Msa1431520 | 0.809456 | 1.875650e-50 | -8.615850e-47 |
| Msa0528310 | Msa1434700 | 0.802095 | 6.600448e-49 | -8.615850e-47 |
| Msa0528310 | Msa1435950 | -0.824705 | 6.983111e-54 | -8.615850e-47 |
| Msa0528310 | Msa1449770 | 0.812023 | 5.222794e-51 | -8.615850e-47 |
| Msa0528310 | Msa1450630 | -0.823466 | 1.364217e-53 | -8.615850e-47 |
| Msa0528310 | Msa1460970 | 0.809918 | 1.492229e-50 | -8.615850e-47 |
| Msa0528310 | Msa1462610 | 0.803531 | 3.333961e-49 | -8.615850e-47 |
| Msa0528310 | Msa1462780 | 0.801806 | 7.566638e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528310 | MtrunA17_Chr4g0004741 | 96.166 | 313 | 12 | 0 | 1 | 313 | 1 | 313 | 0.0 | 615 |
| Msa0528310 | MtrunA17_Chr4g0004721 | 88.854 | 314 | 34 | 1 | 1 | 313 | 1 | 314 | 0.0 | 575 |
| Msa0528310 | MtrunA17_Chr4g0004711 | 88.498 | 313 | 36 | 0 | 1 | 313 | 1 | 313 | 0.0 | 572 |
| Msa0528310 | MtrunA17_Chr4g0004681 | 84.984 | 313 | 44 | 1 | 1 | 313 | 1 | 310 | 0.0 | 551 |
| Msa0528310 | MtrunA17_Chr2g0331641 | 61.465 | 314 | 120 | 1 | 1 | 313 | 1 | 314 | 6.49e-133 | 380 |
| Msa0528310 | MtrunA17_Chr8g0351111 | 42.553 | 282 | 157 | 2 | 37 | 313 | 42 | 323 | 1.64e-84 | 257 |
| Msa0528310 | MtrunA17_Chr8g0351121 | 40.741 | 297 | 166 | 3 | 24 | 313 | 66 | 359 | 4.67e-81 | 249 |
| Msa0528310 | MtrunA17_Chr8g0351141 | 39.414 | 307 | 175 | 3 | 15 | 313 | 23 | 326 | 1.52e-80 | 247 |
| Msa0528310 | MtrunA17_Chr7g0246361 | 44.048 | 252 | 129 | 4 | 61 | 312 | 50 | 289 | 1.19e-65 | 208 |
| Msa0528310 | MtrunA17_Chr1g0210971 | 32.646 | 291 | 170 | 7 | 43 | 308 | 60 | 349 | 1.66e-33 | 126 |
| Msa0528310 | MtrunA17_Chr4g0000511 | 30.916 | 262 | 162 | 5 | 67 | 313 | 151 | 408 | 4.55e-30 | 119 |
| Msa0528310 | MtrunA17_Chr1g0208141 | 29.688 | 256 | 169 | 6 | 67 | 313 | 118 | 371 | 1.01e-28 | 115 |
| Msa0528310 | MtrunA17_Chr3g0077771 | 27.907 | 258 | 163 | 6 | 58 | 295 | 108 | 362 | 2.62e-24 | 101 |
| Msa0528310 | MtrunA17_Chr6g0450811 | 29.134 | 254 | 169 | 6 | 62 | 306 | 116 | 367 | 2.55e-22 | 95.9 |
| Msa0528310 | MtrunA17_Chr7g0248631 | 24.786 | 234 | 165 | 3 | 81 | 304 | 88 | 320 | 8.37e-16 | 77.8 |
| Msa0528310 | MtrunA17_Chr6g0450821 | 25.806 | 248 | 166 | 5 | 62 | 306 | 86 | 318 | 7.41e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0528310 | AT1G79870.1 | 73.163 | 313 | 84 | 0 | 1 | 313 | 1 | 313 | 1.35e-163 | 458 |
| Msa0528310 | AT1G79870.2 | 69.010 | 313 | 78 | 1 | 1 | 313 | 1 | 294 | 4.90e-147 | 415 |
| Msa0528310 | AT1G12550.1 | 48.355 | 304 | 152 | 3 | 13 | 312 | 18 | 320 | 3.82e-100 | 297 |
| Msa0528310 | AT2G45630.2 | 42.568 | 296 | 167 | 3 | 21 | 313 | 43 | 338 | 4.09e-84 | 257 |
| Msa0528310 | AT1G17745.1 | 32.692 | 260 | 160 | 7 | 67 | 313 | 145 | 402 | 1.02e-32 | 127 |
| Msa0528310 | AT1G68010.1 | 31.379 | 290 | 175 | 5 | 43 | 308 | 60 | 349 | 3.37e-31 | 120 |
| Msa0528310 | AT4G34200.1 | 30.859 | 256 | 166 | 6 | 67 | 313 | 124 | 377 | 5.26e-31 | 122 |
| Msa0528310 | AT1G68010.3 | 31.884 | 276 | 164 | 5 | 43 | 294 | 60 | 335 | 1.05e-30 | 119 |
| Msa0528310 | AT1G68010.2 | 31.271 | 291 | 175 | 6 | 43 | 308 | 60 | 350 | 1.81e-29 | 116 |
| Msa0528310 | AT3G19480.1 | 30.078 | 256 | 168 | 6 | 67 | 313 | 109 | 362 | 1.10e-28 | 116 |
| Msa0528310 | AT1G17745.2 | 29.965 | 287 | 159 | 9 | 67 | 313 | 145 | 429 | 1.04e-26 | 110 |
| Msa0528310 | AT1G72190.1 | 29.644 | 253 | 158 | 5 | 58 | 295 | 106 | 353 | 1.08e-24 | 102 |
| Msa0528310 | AT5G14780.3 | 30.041 | 243 | 161 | 5 | 76 | 310 | 102 | 343 | 2.41e-23 | 99.0 |
| Msa0528310 | AT5G14780.2 | 30.041 | 243 | 161 | 5 | 76 | 310 | 114 | 355 | 2.42e-23 | 99.0 |
| Msa0528310 | AT5G14780.1 | 30.041 | 243 | 161 | 5 | 76 | 310 | 128 | 369 | 3.91e-23 | 98.6 |
| Msa0528310 | AT2G45630.1 | 35.156 | 128 | 81 | 2 | 21 | 146 | 43 | 170 | 2.39e-21 | 89.7 |
| Msa0528310 | AT5G28310.1 | 33.846 | 195 | 73 | 7 | 123 | 313 | 91 | 233 | 3.90e-19 | 85.1 |
| Msa0528310 | AT1G01510.1 | 23.750 | 240 | 164 | 3 | 81 | 304 | 96 | 332 | 1.36e-13 | 71.6 |
Find 108 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAAACCATTGGCATTAT+TGG | 0.108448 | 4_1:-1109732 | Msa0528310:CDS |
| CTTGGATAGTACTTGTATTT+TGG | 0.175534 | 4_1:+1109621 | None:intergenic |
| CATGTTCCCGAAGAACTATT+TGG | 0.241347 | 4_1:-1109375 | Msa0528310:CDS |
| GCTACAATCTTTATCGCATT+TGG | 0.249078 | 4_1:-1112165 | Msa0528310:CDS |
| GACTGATGATGTTGCTGATT+TGG | 0.253175 | 4_1:-1111933 | Msa0528310:CDS |
| TGCATTACTTGAAGGTCGTT+TGG | 0.291318 | 4_1:-1109433 | Msa0528310:CDS |
| TACCTCGGCCAATGTTAATT+AGG | 0.297605 | 4_1:+1109484 | None:intergenic |
| TTGAGTTCTTGATCTAAGTA+TGG | 0.305679 | 4_1:+1112193 | None:intergenic |
| GATTTGTCAGAAGTGGAAAT+TGG | 0.306236 | 4_1:-1111862 | Msa0528310:CDS |
| TACGCTTCTTCGGAGGATTT+CGG | 0.309133 | 4_1:-1111894 | Msa0528310:CDS |
| GATGTTGCTGATTTGGCTAT+TGG | 0.316026 | 4_1:-1111926 | Msa0528310:CDS |
| TATAGATCCCATTAGGGTTT+GGG | 0.330034 | 4_1:+1112243 | None:intergenic |
| CTACAATCTTTATCGCATTT+GGG | 0.335483 | 4_1:-1112164 | Msa0528310:CDS |
| GAAGATCTATAGATCCCATT+AGG | 0.336472 | 4_1:+1112236 | None:intergenic |
| TCTCAAAACCCAAACCCTAA+TGG | 0.350798 | 4_1:-1112251 | Msa0528310:exon |
| TTCTAGCCCAAATAGTTCTT+CGG | 0.356251 | 4_1:+1109368 | None:intergenic |
| CTATAGATCCCATTAGGGTT+TGG | 0.357738 | 4_1:+1112242 | None:intergenic |
| TCTAGCCCAAATAGTTCTTC+GGG | 0.361285 | 4_1:+1109369 | None:intergenic |
| CTCAAAACCCAAACCCTAAT+GGG | 0.373521 | 4_1:-1112250 | Msa0528310:exon |
| GCATTACTTGAAGGTCGTTT+GGG | 0.382800 | 4_1:-1109432 | Msa0528310:CDS |
| GCCATGGCCGACCTTCTTCT+AGG | 0.398609 | 4_1:-1109294 | Msa0528310:CDS |
| AACTTGGAGGCTCATTTCCT+TGG | 0.398981 | 4_1:-1109270 | Msa0528310:CDS |
| ATTAAAACCTTCAGCTCTCT+TGG | 0.401991 | 4_1:+1109683 | None:intergenic |
| GTTTGATCCTTACGCTTCTT+CGG | 0.404719 | 4_1:-1111904 | Msa0528310:CDS |
| ACCATTGGCATTATTGGAAT+GGG | 0.410967 | 4_1:-1109726 | Msa0528310:CDS |
| CATTGACCTAGAAAATTTGA+TGG | 0.416063 | 4_1:-1109177 | Msa0528310:three_prime_UTR |
| ATGTTCCCGAAGAACTATTT+GGG | 0.421570 | 4_1:-1109374 | Msa0528310:CDS |
| CGGGAGGTCATTAATGCAAT+TGG | 0.423538 | 4_1:-1109519 | Msa0528310:CDS |
| CTTTGGAGTTCTAGAATAGT+AGG | 0.425937 | 4_1:+1109650 | None:intergenic |
| ACCTAGAAAATTTGATGGAA+TGG | 0.433685 | 4_1:-1109172 | Msa0528310:three_prime_UTR |
| AACCATTGGCATTATTGGAA+TGG | 0.435784 | 4_1:-1109727 | Msa0528310:CDS |
| ACTATGGACATAAAATTGAT+TGG | 0.437851 | 4_1:-1109201 | Msa0528310:three_prime_UTR |
| AAACTCATCACATCATCAAC+CGG | 0.440972 | 4_1:-1109539 | Msa0528310:CDS |
| CTTAACAAGTGTAAGGAGAA+AGG | 0.448740 | 4_1:-1111986 | Msa0528310:CDS |
| AAGATCTATAGATCCCATTA+GGG | 0.453054 | 4_1:+1112237 | None:intergenic |
| CGACCTTCTTCTAGGAAACT+TGG | 0.454624 | 4_1:-1109286 | Msa0528310:CDS |
| AGCATCCAACTGCGACATAC+TGG | 0.457202 | 4_1:-1109586 | Msa0528310:CDS |
| CTGGTCTCTGCATTACTTGA+AGG | 0.461779 | 4_1:-1109441 | Msa0528310:CDS |
| GAAGGTCGTTTGGGTGGTGC+TGG | 0.462451 | 4_1:-1109423 | Msa0528310:CDS |
| AAAGCCACTGTTAACTCCCT+TGG | 0.464385 | 4_1:-1109247 | Msa0528310:CDS |
| TGAGTTGCAGAGAGTTCGAT+TGG | 0.465722 | 4_1:+1112277 | None:intergenic |
| TGATGAGTTTCCTCTGTAAG+AGG | 0.469038 | 4_1:+1109552 | None:intergenic |
| ATCAACACCAACGCTATAGC+TGG | 0.469096 | 4_1:+1112018 | None:intergenic |
| CTGGAAACAATCTCAAGCTT+CGG | 0.481879 | 4_1:+1112037 | None:intergenic |
| ATTATTGGAATGGGAAGGAT+TGG | 0.483559 | 4_1:-1109717 | Msa0528310:CDS |
| ATTCACGAAGATGCAGGAAA+TGG | 0.492321 | 4_1:+1112301 | None:intergenic |
| TTAACAAGTGTAAGGAGAAA+GGG | 0.494005 | 4_1:-1111985 | Msa0528310:CDS |
| TGCTTCAATGAGGTTAGAAT+CGG | 0.502193 | 4_1:+1112063 | None:intergenic |
| ATTGGGATTCACGAAGATGC+AGG | 0.504725 | 4_1:+1112295 | None:intergenic |
| GATTGATCTTAACAAGTGTA+AGG | 0.511207 | 4_1:-1111993 | Msa0528310:CDS |
| ACTCTTGTGATGTGGATTTG+AGG | 0.511668 | 4_1:-1109120 | Msa0528310:three_prime_UTR |
| ACATCATCAGTCAAAACATC+AGG | 0.513625 | 4_1:+1111944 | None:intergenic |
| ATGTTAATTAGGACACCCTT+CGG | 0.518527 | 4_1:+1109495 | None:intergenic |
| GCGTCAATTCGTGCGGTGGT+CGG | 0.520525 | 4_1:-1112103 | Msa0528310:CDS |
| TCCCATTCCAATAATGCCAA+TGG | 0.521994 | 4_1:+1109725 | None:intergenic |
| CAGTTCTCTGGGAAAACCAT+TGG | 0.522702 | 4_1:-1109741 | Msa0528310:CDS |
| TGTGATCGATTTGTCAGAAG+TGG | 0.532616 | 4_1:-1111869 | Msa0528310:CDS |
| GCAGTTGCCAAGAGAGCTGA+AGG | 0.536835 | 4_1:-1109690 | Msa0528310:CDS |
| TTATTGCCTCATGTTGGAAG+CGG | 0.540920 | 4_1:-1109336 | Msa0528310:CDS |
| GCATGTTGATGAACCAGAGC+TGG | 0.545737 | 4_1:-1109460 | Msa0528310:CDS |
| CATTAATGCAATTGGTCCGA+AGG | 0.549098 | 4_1:-1109511 | Msa0528310:CDS |
| CCTCCAAGTTTCCTAGAAGA+AGG | 0.549489 | 4_1:+1109283 | None:intergenic |
| GTGGTCGGAAATGCAAGCGC+CGG | 0.549559 | 4_1:-1112088 | Msa0528310:CDS |
| TCCTAGAAGAAGGTCGGCCA+TGG | 0.550756 | 4_1:+1109293 | None:intergenic |
| CCTTCTTCTAGGAAACTTGG+AGG | 0.552158 | 4_1:-1109283 | Msa0528310:CDS |
| GATGCTAACTCAACAAGACT+TGG | 0.554749 | 4_1:+1109603 | None:intergenic |
| GGTAGAAACTCGAGCTGCCA+TGG | 0.556384 | 4_1:-1109310 | Msa0528310:CDS |
| GAGTTAACAGTGGCTTTCCA+AGG | 0.557323 | 4_1:+1109253 | None:intergenic |
| ACTTTAGTCAAGAAATTACC+TGG | 0.561795 | 4_1:-1108989 | Msa0528310:three_prime_UTR |
| CAATTGCATTAATGACCTCC+CGG | 0.564836 | 4_1:+1109520 | None:intergenic |
| GTCCTAATTAACATTGGCCG+AGG | 0.565769 | 4_1:-1109486 | Msa0528310:CDS |
| TGTTGCCTGCCCTCTTACAG+AGG | 0.566261 | 4_1:-1109562 | Msa0528310:CDS |
| AGTTTCCTCTGTAAGAGGGC+AGG | 0.567739 | 4_1:+1109557 | None:intergenic |
| GAGTTGCAGAGAGTTCGATT+GGG | 0.568148 | 4_1:+1112278 | None:intergenic |
| AATTAGCGACTCTTGTGATG+TGG | 0.569237 | 4_1:-1109128 | Msa0528310:three_prime_UTR |
| AGTAATGCAGAGACCAGCTC+TGG | 0.572833 | 4_1:+1109447 | None:intergenic |
| TTGGCATTATTGGAATGGGA+AGG | 0.585206 | 4_1:-1109722 | Msa0528310:CDS |
| TTATGTCCATAGTTCAAAAG+CGG | 0.585507 | 4_1:+1109211 | None:intergenic |
| TGATTATAAGTTGACAACTA+AGG | 0.586743 | 4_1:-1111831 | Msa0528310:intron |
| CTATTCTAGAACTCCAAAGC+AGG | 0.594716 | 4_1:-1109646 | Msa0528310:CDS |
| CGGCGCGTCAATTCGTGCGG+TGG | 0.598767 | 4_1:-1112107 | Msa0528310:CDS |
| GCCTCATGTTGGAAGCGGCA+CGG | 0.602877 | 4_1:-1109331 | Msa0528310:CDS |
| AAATCCTCCGAAGAAGCGTA+AGG | 0.604514 | 4_1:+1111897 | None:intergenic |
| ATTGTTTCCAGCTATAGCGT+TGG | 0.607959 | 4_1:-1112025 | Msa0528310:CDS |
| AACAACCAGTATGTCGCAGT+TGG | 0.611894 | 4_1:+1109581 | None:intergenic |
| CGGCATGCAGATTAAACCAA+GGG | 0.612509 | 4_1:+1109231 | None:intergenic |
| AATGAAAATTATAGTGCTGG+CGG | 0.613570 | 4_1:-1112358 | None:intergenic |
| AATAGTTCTTCGGGAACATG+AGG | 0.622864 | 4_1:+1109378 | None:intergenic |
| TAATTGATGATGTAACTGAA+TGG | 0.622931 | 4_1:+1109146 | None:intergenic |
| AAGGGTGTCCTAATTAACAT+TGG | 0.623755 | 4_1:-1109492 | Msa0528310:CDS |
| ACCGTGCCGCTTCCAACATG+AGG | 0.623796 | 4_1:+1109330 | None:intergenic |
| TGATCCTTACGCTTCTTCGG+AGG | 0.626638 | 4_1:-1111901 | Msa0528310:CDS |
| ATTAATGCAATTGGTCCGAA+GGG | 0.631084 | 4_1:-1109510 | Msa0528310:CDS |
| GTTGTCTTATTGCCTCATGT+TGG | 0.632321 | 4_1:-1109342 | Msa0528310:CDS |
| CAAGTTTCCTAGAAGAAGGT+CGG | 0.637549 | 4_1:+1109287 | None:intergenic |
| ATAACGAAAGCTATTTCACC+AGG | 0.642081 | 4_1:+1108971 | None:intergenic |
| AATGAGGTTAGAATCGGCGC+CGG | 0.642307 | 4_1:+1112069 | None:intergenic |
| GATGAGTTTCCTCTGTAAGA+GGG | 0.642427 | 4_1:+1109553 | None:intergenic |
| GCTTCGGCAATGCTTCAATG+AGG | 0.644180 | 4_1:+1112053 | None:intergenic |
| TTACTTGAAGGTCGTTTGGG+TGG | 0.644249 | 4_1:-1109429 | Msa0528310:CDS |
| AACTCATCACATCATCAACC+GGG | 0.655089 | 4_1:-1109538 | Msa0528310:CDS |
| GTTCATCAACATGCTTACCT+CGG | 0.658095 | 4_1:+1109469 | None:intergenic |
| GCGGCATGCAGATTAAACCA+AGG | 0.659732 | 4_1:+1109230 | None:intergenic |
| ACACGGCGCGTCAATTCGTG+CGG | 0.666825 | 4_1:-1112110 | Msa0528310:CDS |
| TAAACCAAGGGAGTTAACAG+TGG | 0.668491 | 4_1:+1109243 | None:intergenic |
| AGAAGTGGAAATTGGAAGCG+TGG | 0.693078 | 4_1:-1111854 | Msa0528310:CDS |
| ATGGAATTACTTTAGCTACG+AGG | 0.743135 | 4_1:+1112212 | None:intergenic |
| TCATCACATCATCAACCGGG+AGG | 0.750770 | 4_1:-1109535 | Msa0528310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTAAATATTGAAATAT+AGG | + | chr4_1:1111360-1111379 | None:intergenic | 10.0% |
| !!! | TGAAAAAATAAATTATTTTC+AGG | + | chr4_1:1111550-1111569 | None:intergenic | 10.0% |
| !!! | AAATAATTTATTTTTTCATC+CGG | - | chr4_1:1111552-1111571 | Msa0528310:intron | 10.0% |
| !!! | TTTTTCAATTAAGAATACAA+CGG | + | chr4_1:1109768-1109787 | None:intergenic | 15.0% |
| !!! | ACATACATTAAATATGTTTT+AGG | - | chr4_1:1110371-1110390 | Msa0528310:intron | 15.0% |
| !!! | TTTATTGATAATGTATCTTA+TGG | - | chr4_1:1111017-1111036 | Msa0528310:intron | 15.0% |
| !! | TTATTAAAAGAACCTATTAA+TGG | + | chr4_1:1111280-1111299 | None:intergenic | 15.0% |
| !! | AGTGAAAAACATTTAAAAAT+TGG | - | chr4_1:1111399-1111418 | Msa0528310:intron | 15.0% |
| !!! | AAAATAAATTATTTTCAGGT+TGG | + | chr4_1:1111546-1111565 | None:intergenic | 15.0% |
| !!! | TTAAAAGTTGAGATTTTTGT+GGG | + | chr4_1:1109193-1109212 | None:intergenic | 20.0% |
| !! | ATAAACTATAAGCTCAAAAA+TGG | + | chr4_1:1109621-1109640 | None:intergenic | 20.0% |
| !! | AAAAAATAAGTCAATCCAAA+CGG | + | chr4_1:1110078-1110097 | None:intergenic | 20.0% |
| !!! | TACATTAAATATGTTTTAGG+TGG | - | chr4_1:1110374-1110393 | Msa0528310:intron | 20.0% |
| !! | AATCATAATGTTAACTGTTT+CGG | - | chr4_1:1110532-1110551 | Msa0528310:intron | 20.0% |
| !! | AATATCATGTTATTCATTGT+AGG | - | chr4_1:1110791-1110810 | Msa0528310:intron | 20.0% |
| !! | ATATCATGTTATTCATTGTA+GGG | - | chr4_1:1110792-1110811 | Msa0528310:intron | 20.0% |
| !! | GTTAAAAGTTGAGATTTTTG+TGG | + | chr4_1:1109194-1109213 | None:intergenic | 25.0% |
| !! | TGATTATAAGTTGACAACTA+AGG | - | chr4_1:1109496-1109515 | Msa0528310:CDS | 25.0% |
| ! | GTTGATACTGTTAAAAATTG+TGG | - | chr4_1:1109566-1109585 | Msa0528310:CDS | 25.0% |
| !! | ATGTTGTTTGGTATATTTAG+CGG | + | chr4_1:1109852-1109871 | None:intergenic | 25.0% |
| ! | GCTAATTGAATTATGTTGTT+TGG | + | chr4_1:1109864-1109883 | None:intergenic | 25.0% |
| ! | GCTAATTGAATTATGTTGTT+TGG | + | chr4_1:1109864-1109883 | None:intergenic | 25.0% |
| ! | AGTGAAAAATTGTGAATAGA+TGG | + | chr4_1:1110045-1110064 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCATGTCA+AGG | + | chr4_1:1110205-1110224 | None:intergenic | 25.0% |
| ! | AAAAAATTAGCCAATCCAAA+CGG | - | chr4_1:1110267-1110286 | Msa0528310:intron | 25.0% |
| !!! | TGGAACATAGTTTTAAATTG+TGG | - | chr4_1:1110394-1110413 | Msa0528310:intron | 25.0% |
| ! | ATAATGTATCTTATGGTTCA+TGG | - | chr4_1:1111024-1111043 | Msa0528310:intron | 25.0% |
| !!! | ATTATTTTCAGGTTGGAAAA+TGG | + | chr4_1:1111539-1111558 | None:intergenic | 25.0% |
| ! | ACTATGGACATAAAATTGAT+TGG | - | chr4_1:1112126-1112145 | Msa0528310:CDS | 25.0% |
| !!! | TAATTGATGATGTAACTGAA+TGG | + | chr4_1:1112184-1112203 | None:intergenic | 25.0% |
| AAGATCTATAGATCCCATTA+GGG | + | chr4_1:1109093-1109112 | None:intergenic | 30.0% | |
| TTGAGTTCTTGATCTAAGTA+TGG | + | chr4_1:1109137-1109156 | None:intergenic | 30.0% | |
| CTACAATCTTTATCGCATTT+GGG | - | chr4_1:1109163-1109182 | Msa0528310:three_prime_UTR | 30.0% | |
| !! | TCTCAACTTTTAACTCAACA+CGG | - | chr4_1:1109200-1109219 | Msa0528310:three_prime_UTR | 30.0% |
| GATTGATCTTAACAAGTGTA+AGG | - | chr4_1:1109334-1109353 | Msa0528310:CDS | 30.0% | |
| TTAACAAGTGTAAGGAGAAA+GGG | - | chr4_1:1109342-1109361 | Msa0528310:CDS | 30.0% | |
| ! | AAATTGTGGTCTAGTTCAAT+AGG | - | chr4_1:1109580-1109599 | Msa0528310:CDS | 30.0% |
| TGTCTTATAAGCTCATTTGA+TGG | - | chr4_1:1109653-1109672 | Msa0528310:CDS | 30.0% | |
| TTTGATGGAAAAGACATGTT+TGG | - | chr4_1:1109668-1109687 | Msa0528310:CDS | 30.0% | |
| TTGGTATATTTAGCTGATAG+CGG | + | chr4_1:1109916-1109935 | None:intergenic | 30.0% | |
| ! | AGTTAGCTTATAGATGATAG+CGG | + | chr4_1:1109987-1110006 | None:intergenic | 30.0% |
| AAAAATTAGCCAATCCAAAC+GGG | - | chr4_1:1110268-1110287 | Msa0528310:intron | 30.0% | |
| TAGAGACACAATAAGACTTA+GGG | + | chr4_1:1110294-1110313 | None:intergenic | 30.0% | |
| !! | TAAGTCTTATTGTGTCTCTA+GGG | - | chr4_1:1110294-1110313 | Msa0528310:intron | 30.0% |
| ! | ACATGCATGGAAATTGTTTT+AGG | - | chr4_1:1110423-1110442 | Msa0528310:intron | 30.0% |
| !!! | AGCAGCATAGTTTTAAATTG+TGG | - | chr4_1:1110447-1110466 | Msa0528310:intron | 30.0% |
| CTTGACTGAGTTTGATAAAA+AGG | - | chr4_1:1110755-1110774 | Msa0528310:intron | 30.0% | |
| ! | AAATACAGCTTCATTTTGCA+GGG | + | chr4_1:1110848-1110867 | None:intergenic | 30.0% |
| TACATGAGAATACACATAAC+CGG | + | chr4_1:1111500-1111519 | None:intergenic | 30.0% | |
| ! | CTTGGATAGTACTTGTATTT+TGG | + | chr4_1:1111709-1111728 | None:intergenic | 30.0% |
| TTATGTCCATAGTTCAAAAG+CGG | + | chr4_1:1112119-1112138 | None:intergenic | 30.0% | |
| ! | CATCAAATTTTCTAGGTCAA+TGG | + | chr4_1:1112152-1112171 | None:intergenic | 30.0% |
| CATTGACCTAGAAAATTTGA+TGG | - | chr4_1:1112150-1112169 | Msa0528310:CDS | 30.0% | |
| ACCTAGAAAATTTGATGGAA+TGG | - | chr4_1:1112155-1112174 | Msa0528310:CDS | 30.0% | |
| ! | ACCATTCCATCAAATTTTCT+AGG | + | chr4_1:1112159-1112178 | None:intergenic | 30.0% |
| ACTTTAGTCAAGAAATTACC+TGG | - | chr4_1:1112338-1112357 | Msa0528310:five_prime_UTR | 30.0% | |
| TATAGATCCCATTAGGGTTT+GGG | + | chr4_1:1109087-1109106 | None:intergenic | 35.0% | |
| GAAGATCTATAGATCCCATT+AGG | + | chr4_1:1109094-1109113 | None:intergenic | 35.0% | |
| ATGGAATTACTTTAGCTACG+AGG | + | chr4_1:1109118-1109137 | None:intergenic | 35.0% | |
| GCTACAATCTTTATCGCATT+TGG | - | chr4_1:1109162-1109181 | Msa0528310:three_prime_UTR | 35.0% | |
| TGCTTCAATGAGGTTAGAAT+CGG | + | chr4_1:1109267-1109286 | None:intergenic | 35.0% | |
| CTTAACAAGTGTAAGGAGAA+AGG | - | chr4_1:1109341-1109360 | Msa0528310:CDS | 35.0% | |
| ACATCATCAGTCAAAACATC+AGG | + | chr4_1:1109386-1109405 | None:intergenic | 35.0% | |
| GATTTGTCAGAAGTGGAAAT+TGG | - | chr4_1:1109465-1109484 | Msa0528310:CDS | 35.0% | |
| ! | TCTAGTTCAATAGGTCTGTT+TGG | - | chr4_1:1109589-1109608 | Msa0528310:CDS | 35.0% |
| ! | AGCTAGCTTATAGATGATAG+CGG | + | chr4_1:1110020-1110039 | None:intergenic | 35.0% |
| CTAGAGACACAATAAGACTT+AGG | + | chr4_1:1110295-1110314 | None:intergenic | 35.0% | |
| !! | CTAAGTCTTATTGTGTCTCT+AGG | - | chr4_1:1110293-1110312 | Msa0528310:intron | 35.0% |
| ! | CACAGCTGAAACATAGTTTT+AGG | - | chr4_1:1110343-1110362 | Msa0528310:intron | 35.0% |
| TTCTCTGCAATATCAAGACT+TGG | - | chr4_1:1110561-1110580 | Msa0528310:intron | 35.0% | |
| GAGTATAGTAGTGCTCTATT+AGG | - | chr4_1:1110583-1110602 | Msa0528310:intron | 35.0% | |
| TGATGAAGAGTGGAGATAAA+GGG | + | chr4_1:1110611-1110630 | None:intergenic | 35.0% | |
| ATGATGAAGAGTGGAGATAA+AGG | + | chr4_1:1110612-1110631 | None:intergenic | 35.0% | |
| TTTATCTCCACTCTTCATCA+TGG | - | chr4_1:1110611-1110630 | Msa0528310:intron | 35.0% | |
| ! | ATGAGTTGACGTTTCTAGAT+AGG | - | chr4_1:1110659-1110678 | Msa0528310:intron | 35.0% |
| ! | CAAATACAGCTTCATTTTGC+AGG | + | chr4_1:1110849-1110868 | None:intergenic | 35.0% |
| AACTACGTGAGATTCAGAAA+TGG | + | chr4_1:1110872-1110891 | None:intergenic | 35.0% | |
| TTTCTGAATCTCACGTAGTT+AGG | - | chr4_1:1110872-1110891 | Msa0528310:intron | 35.0% | |
| GTGAATCTCATTGAATTGCA+CGG | - | chr4_1:1110899-1110918 | Msa0528310:intron | 35.0% | |
| ! | GAATCTCGATTTGATAACCT+CGG | - | chr4_1:1111099-1111118 | Msa0528310:intron | 35.0% |
| TGAACAAAAGAGTAGGTCTT+GGG | + | chr4_1:1111139-1111158 | None:intergenic | 35.0% | |
| AAAGGAGTGAACAAAAGAGT+AGG | + | chr4_1:1111146-1111165 | None:intergenic | 35.0% | |
| ! | CTCTTTTGTTCACTCCTTTT+TGG | - | chr4_1:1111147-1111166 | Msa0528310:intron | 35.0% |
| TTGTTGGAAGATTGCCAAAA+AGG | + | chr4_1:1111164-1111183 | None:intergenic | 35.0% | |
| ATGCAGTAGTGATCCTTAAT+GGG | + | chr4_1:1111230-1111249 | None:intergenic | 35.0% | |
| TATGCAGTAGTGATCCTTAA+TGG | + | chr4_1:1111231-1111250 | None:intergenic | 35.0% | |
| TGATCTATCATCATGTTGCA+AGG | - | chr4_1:1111428-1111447 | Msa0528310:intron | 35.0% | |
| GATCTATCATCATGTTGCAA+GGG | - | chr4_1:1111429-1111448 | Msa0528310:intron | 35.0% | |
| !!! | TTTTCAGGTTGGAAAATGGA+GGG | + | chr4_1:1111535-1111554 | None:intergenic | 35.0% |
| !!! | ATTTTCAGGTTGGAAAATGG+AGG | + | chr4_1:1111536-1111555 | None:intergenic | 35.0% |
| ! | TATTTTCGTTGCAGTTCTCT+GGG | - | chr4_1:1111575-1111594 | Msa0528310:intron | 35.0% |
| AACCATTGGCATTATTGGAA+TGG | - | chr4_1:1111600-1111619 | Msa0528310:intron | 35.0% | |
| ACCATTGGCATTATTGGAAT+GGG | - | chr4_1:1111601-1111620 | Msa0528310:intron | 35.0% | |
| ATTATTGGAATGGGAAGGAT+TGG | - | chr4_1:1111610-1111629 | Msa0528310:intron | 35.0% | |
| ATTAAAACCTTCAGCTCTCT+TGG | + | chr4_1:1111647-1111666 | None:intergenic | 35.0% | |
| !! | CTTTGGAGTTCTAGAATAGT+AGG | + | chr4_1:1111680-1111699 | None:intergenic | 35.0% |
| !!! | TTGTATTTTGGTTCCTGCTT+TGG | + | chr4_1:1111697-1111716 | None:intergenic | 35.0% |
| AAACTCATCACATCATCAAC+CGG | - | chr4_1:1111788-1111807 | Msa0528310:intron | 35.0% | |
| ATTAATGCAATTGGTCCGAA+GGG | - | chr4_1:1111817-1111836 | Msa0528310:intron | 35.0% | |
| ATGTTAATTAGGACACCCTT+CGG | + | chr4_1:1111835-1111854 | None:intergenic | 35.0% | |
| !! | AAGGGTGTCCTAATTAACAT+TGG | - | chr4_1:1111835-1111854 | Msa0528310:CDS | 35.0% |
| ATGTTCCCGAAGAACTATTT+GGG | - | chr4_1:1111953-1111972 | Msa0528310:CDS | 35.0% | |
| TTCTAGCCCAAATAGTTCTT+CGG | + | chr4_1:1111962-1111981 | None:intergenic | 35.0% | |
| ATTCACGAAGATGCAGGAAA+TGG | + | chr4_1:1109029-1109048 | None:intergenic | 40.0% | |
| TCTCAAAACCCAAACCCTAA+TGG | - | chr4_1:1109076-1109095 | Msa0528310:three_prime_UTR | 40.0% | |
| CTCAAAACCCAAACCCTAAT+GGG | - | chr4_1:1109077-1109096 | Msa0528310:three_prime_UTR | 40.0% | |
| CTATAGATCCCATTAGGGTT+TGG | + | chr4_1:1109088-1109107 | None:intergenic | 40.0% | |
| CTGGAAACAATCTCAAGCTT+CGG | + | chr4_1:1109293-1109312 | None:intergenic | 40.0% | |
| ATTGTTTCCAGCTATAGCGT+TGG | - | chr4_1:1109302-1109321 | Msa0528310:CDS | 40.0% | |
| ! | GACTGATGATGTTGCTGATT+TGG | - | chr4_1:1109394-1109413 | Msa0528310:CDS | 40.0% |
| !! | GATGTTGCTGATTTGGCTAT+TGG | - | chr4_1:1109401-1109420 | Msa0528310:CDS | 40.0% |
| GTTTGATCCTTACGCTTCTT+CGG | - | chr4_1:1109423-1109442 | Msa0528310:CDS | 40.0% | |
| !! | TGTGATCGATTTGTCAGAAG+TGG | - | chr4_1:1109458-1109477 | Msa0528310:CDS | 40.0% |
| !! | TCACTAAACAAAGTGCCGTT+TGG | - | chr4_1:1110060-1110079 | Msa0528310:intron | 40.0% |
| TCGATAACCATGATGAAGAG+TGG | + | chr4_1:1110621-1110640 | None:intergenic | 40.0% | |
| TGCTGAAACACGAGTTTGTA+TGG | + | chr4_1:1110696-1110715 | None:intergenic | 40.0% | |
| TGCATCCACAAACCAATTTG+AGG | - | chr4_1:1110940-1110959 | Msa0528310:intron | 40.0% | |
| GCATCCACAAACCAATTTGA+GGG | - | chr4_1:1110941-1110960 | Msa0528310:intron | 40.0% | |
| !! | AAGTCCCTCAAATTGGTTTG+TGG | + | chr4_1:1110948-1110967 | None:intergenic | 40.0% |
| ACAAACCAATTTGAGGGACT+TGG | - | chr4_1:1110947-1110966 | Msa0528310:intron | 40.0% | |
| AGAAACCAAGTCCCTCAAAT+TGG | + | chr4_1:1110955-1110974 | None:intergenic | 40.0% | |
| GTGAACAAAAGAGTAGGTCT+TGG | + | chr4_1:1111140-1111159 | None:intergenic | 40.0% | |
| ! | AGATGTTTCTACTGCCTACT+GGG | + | chr4_1:1111189-1111208 | None:intergenic | 40.0% |
| GTGATCCAATTCACCCATTA+AGG | - | chr4_1:1111214-1111233 | Msa0528310:intron | 40.0% | |
| ! | GTGATCCTTAATGGGTGAAT+TGG | + | chr4_1:1111222-1111241 | None:intergenic | 40.0% |
| GTCACACTGCTCATTAAAAC+CGG | - | chr4_1:1111478-1111497 | Msa0528310:intron | 40.0% | |
| !! | TTTCAGGTTGGAAAATGGAG+GGG | + | chr4_1:1111534-1111553 | None:intergenic | 40.0% |
| GAGAACTGCAACGAAAATAC+CGG | + | chr4_1:1111574-1111593 | None:intergenic | 40.0% | |
| ! | GTATTTTCGTTGCAGTTCTC+TGG | - | chr4_1:1111574-1111593 | Msa0528310:intron | 40.0% |
| GGGAAAACCATTGGCATTAT+TGG | - | chr4_1:1111595-1111614 | Msa0528310:intron | 40.0% | |
| TCCCATTCCAATAATGCCAA+TGG | + | chr4_1:1111605-1111624 | None:intergenic | 40.0% | |
| TTGGCATTATTGGAATGGGA+AGG | - | chr4_1:1111605-1111624 | Msa0528310:intron | 40.0% | |
| !! | CTATTCTAGAACTCCAAAGC+AGG | - | chr4_1:1111681-1111700 | Msa0528310:intron | 40.0% |
| GATGCTAACTCAACAAGACT+TGG | + | chr4_1:1111727-1111746 | None:intergenic | 40.0% | |
| GATGAGTTTCCTCTGTAAGA+GGG | + | chr4_1:1111777-1111796 | None:intergenic | 40.0% | |
| TGATGAGTTTCCTCTGTAAG+AGG | + | chr4_1:1111778-1111797 | None:intergenic | 40.0% | |
| AACTCATCACATCATCAACC+GGG | - | chr4_1:1111789-1111808 | Msa0528310:intron | 40.0% | |
| CAATTGCATTAATGACCTCC+CGG | + | chr4_1:1111810-1111829 | None:intergenic | 40.0% | |
| CATTAATGCAATTGGTCCGA+AGG | - | chr4_1:1111816-1111835 | Msa0528310:intron | 40.0% | |
| TACCTCGGCCAATGTTAATT+AGG | + | chr4_1:1111846-1111865 | None:intergenic | 40.0% | |
| GTTCATCAACATGCTTACCT+CGG | + | chr4_1:1111861-1111880 | None:intergenic | 40.0% | |
| TGCATTACTTGAAGGTCGTT+TGG | - | chr4_1:1111894-1111913 | Msa0528310:CDS | 40.0% | |
| GCATTACTTGAAGGTCGTTT+GGG | - | chr4_1:1111895-1111914 | Msa0528310:CDS | 40.0% | |
| AATAGTTCTTCGGGAACATG+AGG | + | chr4_1:1111952-1111971 | None:intergenic | 40.0% | |
| CATGTTCCCGAAGAACTATT+TGG | - | chr4_1:1111952-1111971 | Msa0528310:CDS | 40.0% | |
| TCTAGCCCAAATAGTTCTTC+GGG | + | chr4_1:1111961-1111980 | None:intergenic | 40.0% | |
| ! | GTTGTCTTATTGCCTCATGT+TGG | - | chr4_1:1111985-1112004 | Msa0528310:CDS | 40.0% |
| TTATTGCCTCATGTTGGAAG+CGG | - | chr4_1:1111991-1112010 | Msa0528310:CDS | 40.0% | |
| CAAGTTTCCTAGAAGAAGGT+CGG | + | chr4_1:1112043-1112062 | None:intergenic | 40.0% | |
| TAAACCAAGGGAGTTAACAG+TGG | + | chr4_1:1112087-1112106 | None:intergenic | 40.0% | |
| AATTAGCGACTCTTGTGATG+TGG | - | chr4_1:1112199-1112218 | Msa0528310:CDS | 40.0% | |
| ACTCTTGTGATGTGGATTTG+AGG | - | chr4_1:1112207-1112226 | Msa0528310:CDS | 40.0% | |
| ATTGGGATTCACGAAGATGC+AGG | + | chr4_1:1109035-1109054 | None:intergenic | 45.0% | |
| GAGTTGCAGAGAGTTCGATT+GGG | + | chr4_1:1109052-1109071 | None:intergenic | 45.0% | |
| TGAGTTGCAGAGAGTTCGAT+TGG | + | chr4_1:1109053-1109072 | None:intergenic | 45.0% | |
| ATCAACACCAACGCTATAGC+TGG | + | chr4_1:1109312-1109331 | None:intergenic | 45.0% | |
| ! | AAATCCTCCGAAGAAGCGTA+AGG | + | chr4_1:1109433-1109452 | None:intergenic | 45.0% |
| TACGCTTCTTCGGAGGATTT+CGG | - | chr4_1:1109433-1109452 | Msa0528310:CDS | 45.0% | |
| AGAAGTGGAAATTGGAAGCG+TGG | - | chr4_1:1109473-1109492 | Msa0528310:CDS | 45.0% | |
| AATAAGACTTAGGGCCCGTT+TGG | + | chr4_1:1110285-1110304 | None:intergenic | 45.0% | |
| ! | GTCTTATTGTGTCTCTAGGG+TGG | - | chr4_1:1110297-1110316 | Msa0528310:intron | 45.0% |
| ATTGTGGTTCGCAACATGCA+TGG | - | chr4_1:1110410-1110429 | Msa0528310:intron | 45.0% | |
| CACGGTATGAGTTCAGTCAT+GGG | - | chr4_1:1110917-1110936 | Msa0528310:intron | 45.0% | |
| ! | CGATTTGATAACCTCGGTTC+CGG | - | chr4_1:1111105-1111124 | Msa0528310:intron | 45.0% |
| ACAAAAGAGTAGGTCTTGGG+TGG | + | chr4_1:1111136-1111155 | None:intergenic | 45.0% | |
| ATCTTCCAACAATCCCCAGT+AGG | - | chr4_1:1111172-1111191 | Msa0528310:intron | 45.0% | |
| ! | GATGTTTCTACTGCCTACTG+GGG | + | chr4_1:1111188-1111207 | None:intergenic | 45.0% |
| ! | CAGATGTTTCTACTGCCTAC+TGG | + | chr4_1:1111190-1111209 | None:intergenic | 45.0% |
| ACGCTGCTCTTGCCATTAAT+AGG | - | chr4_1:1111265-1111284 | Msa0528310:intron | 45.0% | |
| !! | TTCAGGTTGGAAAATGGAGG+GGG | + | chr4_1:1111533-1111552 | None:intergenic | 45.0% |
| ! | CAGTTCTCTGGGAAAACCAT+TGG | - | chr4_1:1111586-1111605 | Msa0528310:intron | 45.0% |
| AACAACCAGTATGTCGCAGT+TGG | + | chr4_1:1111749-1111768 | None:intergenic | 45.0% | |
| CGGGAGGTCATTAATGCAAT+TGG | - | chr4_1:1111808-1111827 | Msa0528310:intron | 45.0% | |
| GTCCTAATTAACATTGGCCG+AGG | - | chr4_1:1111841-1111860 | Msa0528310:CDS | 45.0% | |
| CTGGTCTCTGCATTACTTGA+AGG | - | chr4_1:1111886-1111905 | Msa0528310:CDS | 45.0% | |
| TTACTTGAAGGTCGTTTGGG+TGG | - | chr4_1:1111898-1111917 | Msa0528310:CDS | 45.0% | |
| ! | CGACCTTCTTCTAGGAAACT+TGG | - | chr4_1:1112041-1112060 | Msa0528310:CDS | 45.0% |
| CCTCCAAGTTTCCTAGAAGA+AGG | + | chr4_1:1112047-1112066 | None:intergenic | 45.0% | |
| ! | CCTTCTTCTAGGAAACTTGG+AGG | - | chr4_1:1112044-1112063 | Msa0528310:CDS | 45.0% |
| AACTTGGAGGCTCATTTCCT+TGG | - | chr4_1:1112057-1112076 | Msa0528310:CDS | 45.0% | |
| GAGTTAACAGTGGCTTTCCA+AGG | + | chr4_1:1112077-1112096 | None:intergenic | 45.0% | |
| AAAGCCACTGTTAACTCCCT+TGG | - | chr4_1:1112080-1112099 | Msa0528310:CDS | 45.0% | |
| CGGCATGCAGATTAAACCAA+GGG | + | chr4_1:1112099-1112118 | None:intergenic | 45.0% | |
| !!! | TGCATGCCGCTTTTGAACTA+TGG | - | chr4_1:1112110-1112129 | Msa0528310:CDS | 45.0% |
| !! | ATAATAAGATTAAATTAATT+TGG | - | chr4_1:1111050-1111069 | Msa0528310:intron | 5.0% |
| !!! | TTTAATAATACTTTTATATT+TGG | - | chr4_1:1111292-1111311 | Msa0528310:intron | 5.0% |
| AATGAGGTTAGAATCGGCGC+CGG | + | chr4_1:1109261-1109280 | None:intergenic | 50.0% | |
| GCTTCGGCAATGCTTCAATG+AGG | + | chr4_1:1109277-1109296 | None:intergenic | 50.0% | |
| TGATCCTTACGCTTCTTCGG+AGG | - | chr4_1:1109426-1109445 | Msa0528310:CDS | 50.0% | |
| !! | TTTGCAGGGAAGCACTGAGA+GGG | + | chr4_1:1110834-1110853 | None:intergenic | 50.0% |
| !!! | TTTTGCAGGGAAGCACTGAG+AGG | + | chr4_1:1110835-1110854 | None:intergenic | 50.0% |
| GCACGGTATGAGTTCAGTCA+TGG | - | chr4_1:1110916-1110935 | Msa0528310:intron | 50.0% | |
| AGAGTAGGTCTTGGGTGGTA+AGG | + | chr4_1:1111131-1111150 | None:intergenic | 50.0% | |
| TACTGCCTACTGGGGATTGT+TGG | + | chr4_1:1111180-1111199 | None:intergenic | 50.0% | |
| !! | TCAGGTTGGAAAATGGAGGG+GGG | + | chr4_1:1111532-1111551 | None:intergenic | 50.0% |
| AGCATCCAACTGCGACATAC+TGG | - | chr4_1:1111741-1111760 | Msa0528310:intron | 50.0% | |
| AGTTTCCTCTGTAAGAGGGC+AGG | + | chr4_1:1111773-1111792 | None:intergenic | 50.0% | |
| TCATCACATCATCAACCGGG+AGG | - | chr4_1:1111792-1111811 | Msa0528310:intron | 50.0% | |
| ! | GCATGTTGATGAACCAGAGC+TGG | - | chr4_1:1111867-1111886 | Msa0528310:CDS | 50.0% |
| AGTAATGCAGAGACCAGCTC+TGG | + | chr4_1:1111883-1111902 | None:intergenic | 50.0% | |
| GCGGCATGCAGATTAAACCA+AGG | + | chr4_1:1112100-1112119 | None:intergenic | 50.0% | |
| GACTTAGGGCCCGTTTGGAT+TGG | + | chr4_1:1110280-1110299 | None:intergenic | 55.0% | |
| ! | GTGGTTTGCAGCTGCAGTCA+TGG | - | chr4_1:1110466-1110485 | Msa0528310:intron | 55.0% |
| TAGGTCTTGGGTGGTAAGGC+CGG | + | chr4_1:1111127-1111146 | None:intergenic | 55.0% | |
| AATGGCAAGAGCAGCGTCAC+AGG | + | chr4_1:1111262-1111281 | None:intergenic | 55.0% | |
| TTGGAAAATGGAGGGGGGAG+GGG | + | chr4_1:1111527-1111546 | None:intergenic | 55.0% | |
| GTTGGAAAATGGAGGGGGGA+GGG | + | chr4_1:1111528-1111547 | None:intergenic | 55.0% | |
| GCAGTTGCCAAGAGAGCTGA+AGG | - | chr4_1:1111637-1111656 | Msa0528310:intron | 55.0% | |
| TGTTGCCTGCCCTCTTACAG+AGG | - | chr4_1:1111765-1111784 | Msa0528310:intron | 55.0% | |
| GGTAGAAACTCGAGCTGCCA+TGG | - | chr4_1:1112017-1112036 | Msa0528310:CDS | 55.0% | |
| TCCTAGAAGAAGGTCGGCCA+TGG | + | chr4_1:1112037-1112056 | None:intergenic | 55.0% | |
| ACACGGCGCGTCAATTCGTG+CGG | - | chr4_1:1109217-1109236 | Msa0528310:three_prime_UTR | 60.0% | |
| GCGTCAATTCGTGCGGTGGT+CGG | - | chr4_1:1109224-1109243 | Msa0528310:exon | 60.0% | |
| GTGGTCGGAAATGCAAGCGC+CGG | - | chr4_1:1109239-1109258 | Msa0528310:exon | 60.0% | |
| TGGAAAATGGAGGGGGGAGG+GGG | + | chr4_1:1111526-1111545 | None:intergenic | 60.0% | |
| GGTTGGAAAATGGAGGGGGG+AGG | + | chr4_1:1111529-1111548 | None:intergenic | 60.0% | |
| GAAGGTCGTTTGGGTGGTGC+TGG | - | chr4_1:1111904-1111923 | Msa0528310:CDS | 60.0% | |
| GCCTCATGTTGGAAGCGGCA+CGG | - | chr4_1:1111996-1112015 | Msa0528310:CDS | 60.0% | |
| !! | ACCGTGCCGCTTCCAACATG+AGG | + | chr4_1:1112000-1112019 | None:intergenic | 60.0% |
| GCCATGGCCGACCTTCTTCT+AGG | - | chr4_1:1112033-1112052 | Msa0528310:CDS | 60.0% | |
| GGAAAATGGAGGGGGGAGGG+GGG | + | chr4_1:1111525-1111544 | None:intergenic | 65.0% | |
| CGGCGCGTCAATTCGTGCGG+TGG | - | chr4_1:1109220-1109239 | Msa0528310:three_prime_UTR | 70.0% | |
| GGGTGGTAAGGCCGGAACCG+AGG | + | chr4_1:1111119-1111138 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 1108973 | 1112376 | 1108973 | ID=Msa0528310;Name=Msa0528310 |
| chr4_1 | mRNA | 1108973 | 1112376 | 1108973 | ID=Msa0528310-mRNA-1;Parent=Msa0528310;Name=Msa0528310-mRNA-1;_AED=0.03;_eAED=0.03;_QI=122|1|1|1|0.5|0.33|3|245|313 |
| chr4_1 | exon | 1108973 | 1109026 | 1108973 | ID=Msa0528310-mRNA-1:exon:328;Parent=Msa0528310-mRNA-1 |
| chr4_1 | exon | 1109051 | 1109760 | 1109051 | ID=Msa0528310-mRNA-1:exon:327;Parent=Msa0528310-mRNA-1 |
| chr4_1 | exon | 1111832 | 1112376 | 1111832 | ID=Msa0528310-mRNA-1:exon:326;Parent=Msa0528310-mRNA-1 |
| chr4_1 | five_prime_UTR | 1112255 | 1112376 | 1112255 | ID=Msa0528310-mRNA-1:five_prime_utr;Parent=Msa0528310-mRNA-1 |
| chr4_1 | CDS | 1111832 | 1112254 | 1111832 | ID=Msa0528310-mRNA-1:cds;Parent=Msa0528310-mRNA-1 |
| chr4_1 | CDS | 1109242 | 1109760 | 1109242 | ID=Msa0528310-mRNA-1:cds;Parent=Msa0528310-mRNA-1 |
| chr4_1 | three_prime_UTR | 1109051 | 1109241 | 1109051 | ID=Msa0528310-mRNA-1:three_prime_utr;Parent=Msa0528310-mRNA-1 |
| chr4_1 | three_prime_UTR | 1108973 | 1109026 | 1108973 | ID=Msa0528310-mRNA-1:three_prime_utr;Parent=Msa0528310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
