Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023160 | XP_003623155.2 | 100.000 | 99 | 0 | 0 | 1 | 99 | 1 | 99 | 2.61e-63 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023160 | sp|Q9SI54|LSM7_ARATH | 90.816 | 98 | 9 | 0 | 1 | 98 | 1 | 98 | 2.47e-59 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023160 | G7L5K6 | 100.000 | 99 | 0 | 0 | 1 | 99 | 1 | 99 | 1.25e-63 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0699190 | Msa1023160 | 0.810619 | 1.053675e-50 | -8.615850e-47 |
| Msa0706500 | Msa1023160 | 0.822100 | 2.837595e-53 | -8.615850e-47 |
| Msa0376820 | Msa1023160 | 0.811442 | 6.987213e-51 | -8.615850e-47 |
| Msa0470530 | Msa1023160 | 0.803005 | 4.285353e-49 | -8.615850e-47 |
| Msa0472130 | Msa1023160 | 0.814181 | 1.756185e-51 | -8.615850e-47 |
| Msa0481480 | Msa1023160 | 0.816196 | 6.262841e-52 | -8.615850e-47 |
| Msa0994290 | Msa1023160 | 0.805686 | 1.184084e-49 | -8.615850e-47 |
| Msa1023160 | Msa1184370 | 0.832440 | 9.442911e-56 | -8.615850e-47 |
| Msa1023160 | Msa1227690 | 0.807114 | 5.919114e-50 | -8.615850e-47 |
| Msa1023160 | Msa1362790 | 0.855396 | 6.490179e-62 | -8.615850e-47 |
| Msa1023160 | Msa1369190 | 0.843300 | 1.525314e-58 | -8.615850e-47 |
| Msa1023160 | Msa1413260 | 0.818703 | 1.707094e-52 | -8.615850e-47 |
| Msa1023160 | Msa1425670 | 0.834305 | 3.235780e-56 | -8.615850e-47 |
| Msa1023160 | Msa1442850 | 0.806022 | 1.006569e-49 | -8.615850e-47 |
| Msa1023160 | Msa1450280 | 0.815055 | 1.124761e-51 | -8.615850e-47 |
| Msa1023160 | Msa1455950 | 0.831990 | 1.219965e-55 | -8.615850e-47 |
| Msa1023160 | Msa1456050 | 0.809885 | 1.516512e-50 | -8.615850e-47 |
| Msa1023160 | Msa1462860 | 0.876445 | 1.388543e-68 | -8.615850e-47 |
| Msa1023160 | Msa1465080 | 0.819315 | 1.238569e-52 | -8.615850e-47 |
| Msa0348830 | Msa1023160 | 0.862077 | 6.543601e-64 | -8.615850e-47 |
| Msa0573350 | Msa1023160 | 0.827345 | 1.646783e-54 | -8.615850e-47 |
| Msa0960830 | Msa1023160 | 0.808325 | 3.274190e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023160 | MtrunA17_Chr7g0240391 | 100.000 | 99 | 0 | 0 | 1 | 99 | 1 | 99 | 2.40e-67 | 197 |
| Msa1023160 | MtrunA17_Chr8g0351841 | 95.960 | 99 | 4 | 0 | 1 | 99 | 1 | 99 | 5.52e-64 | 188 |
| Msa1023160 | MtrunA17_Chr7g0266561 | 38.028 | 71 | 35 | 1 | 10 | 80 | 9 | 70 | 8.93e-13 | 58.5 |
| Msa1023160 | MtrunA17_Chr6g0477821 | 37.500 | 72 | 36 | 1 | 10 | 81 | 9 | 71 | 1.19e-12 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023160 | AT2G03870.2 | 90.816 | 98 | 9 | 0 | 1 | 98 | 1 | 98 | 2.51e-60 | 179 |
| Msa1023160 | AT2G03870.1 | 90.816 | 98 | 9 | 0 | 1 | 98 | 1 | 98 | 2.51e-60 | 179 |
| Msa1023160 | AT2G23930.1 | 42.254 | 71 | 32 | 2 | 10 | 80 | 9 | 70 | 3.69e-13 | 59.7 |
| Msa1023160 | AT3G11500.2 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.36e-12 | 57.8 |
| Msa1023160 | AT3G11500.1 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.36e-12 | 57.8 |
Find 44 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATTGAACTTCCTGTTAT+GGG | 0.314456 | 7_1:-50505047 | Msa1023160:three_prime_UTR |
| TTTGTTAGCATACATATATT+AGG | 0.315747 | 7_1:+50505174 | None:intergenic |
| TTAAATTGAACTTCCTGTTA+TGG | 0.322004 | 7_1:-50505048 | Msa1023160:three_prime_UTR |
| AGGGAGAAAAGAAACAGTTT+TGG | 0.361914 | 7_1:-50509740 | Msa1023160:CDS |
| TTATCCACACATTCAGTCTT+AGG | 0.361939 | 7_1:+50505201 | None:intergenic |
| ATAGACAAGTTGTAACAAAA+AGG | 0.371580 | 7_1:+50504956 | None:intergenic |
| AGCGTTTGAACTCCCATAAC+AGG | 0.405383 | 7_1:+50505035 | None:intergenic |
| GCCCCATCTGGTTGAAGAAA+GGG | 0.424703 | 7_1:+50505223 | None:intergenic |
| TCTCATCGGTACCATCGGTT+GGG | 0.437918 | 7_1:+50505254 | None:intergenic |
| TCAATTACTTAACCTTGTAC+TGG | 0.449744 | 7_1:-50507248 | Msa1023160:CDS |
| ATTCAGTCTTAGGCCCCATC+TGG | 0.452686 | 7_1:+50505211 | None:intergenic |
| ACCCCTTTCTTCAACCAGAT+GGG | 0.485806 | 7_1:-50505225 | Msa1023160:CDS |
| GGCCCCATCTGGTTGAAGAA+AGG | 0.492361 | 7_1:+50505222 | None:intergenic |
| AACCCCTTTCTTCAACCAGA+TGG | 0.499918 | 7_1:-50505226 | Msa1023160:CDS |
| TCAGTGACAGGAACTTTGAA+AGG | 0.518990 | 7_1:-50507277 | Msa1023160:intron |
| GCCAAGACTTCTTGTCTGAT+CGG | 0.519750 | 7_1:+50506069 | None:intergenic |
| CTCATCGGTACCATCGGTTG+GGG | 0.529590 | 7_1:+50505255 | None:intergenic |
| GGCAATCTCATCGGTACCAT+CGG | 0.530348 | 7_1:+50505249 | None:intergenic |
| ATCTCATCGGTACCATCGGT+TGG | 0.531471 | 7_1:+50505253 | None:intergenic |
| TGTCAGAAGCGTTAACGCAT+AGG | 0.532509 | 7_1:+50505096 | None:intergenic |
| CAACAGCTTCGTCCAGTACA+AGG | 0.533258 | 7_1:+50507236 | None:intergenic |
| GCTAAAATGCAGGTTTGTAG+AGG | 0.541478 | 7_1:-50505298 | Msa1023160:intron |
| ACCGATCAGACAAGAAGTCT+TGG | 0.542240 | 7_1:-50506070 | Msa1023160:CDS |
| ACAGAGACGATCTGAGGTGC+AGG | 0.542595 | 7_1:+50509928 | None:intergenic |
| CCCCTTTCTTCAACCAGATG+GGG | 0.548210 | 7_1:-50505224 | Msa1023160:CDS |
| TAGATGACAATGTGATAGAC+TGG | 0.550365 | 7_1:-50505012 | Msa1023160:three_prime_UTR |
| ATCTGGTTGAAGAAAGGGGT+TGG | 0.552714 | 7_1:+50505228 | None:intergenic |
| TTGGCAAAATTCGTTGACAA+AGG | 0.572355 | 7_1:-50509715 | Msa1023160:CDS |
| AAAGGGGTTGGCAATCTCAT+CGG | 0.592366 | 7_1:+50505240 | None:intergenic |
| GAGACGATCTGAGGTGCAGG+TGG | 0.596597 | 7_1:+50509931 | None:intergenic |
| CCCCATCTGGTTGAAGAAAG+GGG | 0.602661 | 7_1:+50505224 | None:intergenic |
| CGCATAGGAGAGTCACGACT+AGG | 0.612672 | 7_1:+50505111 | None:intergenic |
| AGGATTACCTTGTCTACCAC+CGG | 0.613364 | 7_1:+50509675 | None:intergenic |
| GGTGTTCAAGTTAAGCTCAC+CGG | 0.616462 | 7_1:-50509694 | Msa1023160:CDS |
| AAGCTCACCGGTGGTAGACA+AGG | 0.616471 | 7_1:-50509682 | Msa1023160:intron |
| ATGCTCGTGTCCCCAACCGA+TGG | 0.635299 | 7_1:-50505265 | Msa1023160:CDS |
| GAGAATACAGAGACGATCTG+AGG | 0.639128 | 7_1:+50509922 | None:intergenic |
| CTCTCGCACTGTTTAAACAG+CGG | 0.641442 | 7_1:-50509902 | Msa1023160:five_prime_UTR |
| TTAGTAACTAAACTGATGAG+AGG | 0.668013 | 7_1:+50505150 | None:intergenic |
| GGGGCCTAAGACTGAATGTG+TGG | 0.676762 | 7_1:-50505205 | Msa1023160:exon |
| AGACGATCTGAGGTGCAGGT+GGG | 0.677394 | 7_1:+50509932 | None:intergenic |
| GTTCAAGTTAAGCTCACCGG+TGG | 0.687790 | 7_1:-50509691 | Msa1023160:CDS |
| GAAGCTGTTGAGTTTCTGAG+AGG | 0.702935 | 7_1:-50507223 | Msa1023160:intron |
| GAGTGACTGAGACTTCGACA+TGG | 0.753210 | 7_1:-50509870 | Msa1023160:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTTATATGTTTGTTA+AGG | + | chr7_1:50506053-50506072 | None:intergenic | 10.0% |
| !! | ATTTCATAATAAAATTGTTT+GGG | + | chr7_1:50506202-50506221 | None:intergenic | 10.0% |
| !! | TATTTCATAATAAAATTGTT+TGG | + | chr7_1:50506203-50506222 | None:intergenic | 10.0% |
| !!! | AAACAATTTTATTATGAAAT+AGG | - | chr7_1:50506202-50506221 | Msa1023160:intron | 10.0% |
| !!! | AACAATTTTATTATGAAATA+GGG | - | chr7_1:50506203-50506222 | Msa1023160:intron | 10.0% |
| !!! | TTTTCGATATTTATAAATTT+TGG | - | chr7_1:50507739-50507758 | Msa1023160:intron | 10.0% |
| !!! | TTTTAATTAATTATTCATTC+AGG | + | chr7_1:50508170-50508189 | None:intergenic | 10.0% |
| !! | AAAATTATTCAATAGATAAG+TGG | + | chr7_1:50505611-50505630 | None:intergenic | 15.0% |
| !!! | ACTTATCTATTGAATAATTT+TGG | - | chr7_1:50505610-50505629 | Msa1023160:intron | 15.0% |
| !!! | CTTATCTATTGAATAATTTT+GGG | - | chr7_1:50505611-50505630 | Msa1023160:intron | 15.0% |
| !!! | TTATCTATTGAATAATTTTG+GGG | - | chr7_1:50505612-50505631 | Msa1023160:intron | 15.0% |
| !! | ATATAGAACATATAGAATAA+GGG | + | chr7_1:50506598-50506617 | None:intergenic | 15.0% |
| !!! | AACTTAATAATTTTTCTCTT+TGG | + | chr7_1:50506823-50506842 | None:intergenic | 15.0% |
| !! | AGAGAAAAATTATTAAGTTA+AGG | - | chr7_1:50506824-50506843 | Msa1023160:intron | 15.0% |
| !!! | ATAAATTTTGGATCATATAA+TGG | - | chr7_1:50507751-50507770 | Msa1023160:intron | 15.0% |
| !! | AAATAAAAAAGTTTAAGCTT+AGG | + | chr7_1:50508086-50508105 | None:intergenic | 15.0% |
| !!! | TTGCATTTTCTATTTTTTTT+TGG | - | chr7_1:50508264-50508283 | Msa1023160:intron | 15.0% |
| !! | AAATTACAGATTATATTTGA+AGG | + | chr7_1:50508583-50508602 | None:intergenic | 15.0% |
| !! | ATTTATTAATTGAAACCAAT+GGG | - | chr7_1:50509109-50509128 | Msa1023160:intron | 15.0% |
| !!! | ATAATATCTTATTTTTGTGA+TGG | - | chr7_1:50509316-50509335 | Msa1023160:intron | 15.0% |
| !! | ATGACATGAAAACATAATTA+AGG | + | chr7_1:50506128-50506147 | None:intergenic | 20.0% |
| !! | AGAGGAATATTTGTATAAAT+AGG | + | chr7_1:50506339-50506358 | None:intergenic | 20.0% |
| !! | GATATAGAACATATAGAATA+AGG | + | chr7_1:50506599-50506618 | None:intergenic | 20.0% |
| !! | ATCAAATTACAAAGAACATA+AGG | + | chr7_1:50506726-50506745 | None:intergenic | 20.0% |
| !!! | TAATTTGATCTTTGTTGTTT+GGG | - | chr7_1:50506737-50506756 | Msa1023160:intron | 20.0% |
| !! | ATGACAAAGAAAATTAACTA+TGG | + | chr7_1:50506781-50506800 | None:intergenic | 20.0% |
| !! | ATCGAAAACATATATATCAT+TGG | + | chr7_1:50507727-50507746 | None:intergenic | 20.0% |
| !! | TATAACTCATTGTAATAAGA+TGG | - | chr7_1:50507792-50507811 | Msa1023160:intron | 20.0% |
| !! | ATAACTCATTGTAATAAGAT+GGG | - | chr7_1:50507793-50507812 | Msa1023160:intron | 20.0% |
| !! | AAAATTCATTGAATCAGATT+CGG | - | chr7_1:50507851-50507870 | Msa1023160:intron | 20.0% |
| !!! | AAATTAGTTAAGCTTTTCAA+AGG | - | chr7_1:50507964-50507983 | Msa1023160:intron | 20.0% |
| !! | CATTTATTAATTGAAACCAA+TGG | - | chr7_1:50509108-50509127 | Msa1023160:intron | 20.0% |
| !! | ATGCAAATCTTTATCTTTAT+TGG | - | chr7_1:50509146-50509165 | Msa1023160:intron | 20.0% |
| !! | TGCAAATCTTTATCTTTATT+GGG | - | chr7_1:50509147-50509166 | Msa1023160:intron | 20.0% |
| !! | TTATTGGGACAAAAAAATTA+TGG | - | chr7_1:50509162-50509181 | Msa1023160:intron | 20.0% |
| !!! | TTGCAGTTTTATTATTTGAA+TGG | - | chr7_1:50509198-50509217 | Msa1023160:intron | 20.0% |
| !! | TTTGTTAGCATACATATATT+AGG | + | chr7_1:50509717-50509736 | None:intergenic | 20.0% |
| ! | TTTATATGTGATTAACAGTC+AGG | - | chr7_1:50505128-50505147 | Msa1023160:three_prime_UTR | 25.0% |
| ! | TTATATGTGATTAACAGTCA+GGG | - | chr7_1:50505129-50505148 | Msa1023160:three_prime_UTR | 25.0% |
| !!! | AAAAGAAACAGTTTTGGATT+TGG | - | chr7_1:50505154-50505173 | Msa1023160:three_prime_UTR | 25.0% |
| ! | AAGAAGAAGAAACCTAAAAA+AGG | + | chr7_1:50505236-50505255 | None:intergenic | 25.0% |
| !!! | TTTACTCTTAAATTTGCTGA+AGG | - | chr7_1:50505728-50505747 | Msa1023160:intron | 25.0% |
| ! | TTACCTTTCATACACTAAAA+GGG | + | chr7_1:50505843-50505862 | None:intergenic | 25.0% |
| ! | TAATTTCAACTCTTGCAAAA+TGG | - | chr7_1:50505874-50505893 | Msa1023160:intron | 25.0% |
| ! | AATTTCAACTCTTGCAAAAT+GGG | - | chr7_1:50505875-50505894 | Msa1023160:intron | 25.0% |
| !! | ATGTTTGTTAAGGTAGTTTA+TGG | + | chr7_1:50506043-50506062 | None:intergenic | 25.0% |
| ! | ATTATGAAATAGGGAAGAAT+AGG | - | chr7_1:50506212-50506231 | Msa1023160:intron | 25.0% |
| ! | AAAGGTTGTTAGTTAATTAG+AGG | + | chr7_1:50506357-50506376 | None:intergenic | 25.0% |
| !! | TATAACTCCCTTTTATTCTA+TGG | - | chr7_1:50506383-50506402 | Msa1023160:intron | 25.0% |
| !! | ATAACTCCCTTTTATTCTAT+GGG | - | chr7_1:50506384-50506403 | Msa1023160:intron | 25.0% |
| ! | CTATATCCTAACAATATGTT+TGG | - | chr7_1:50506612-50506631 | Msa1023160:intron | 25.0% |
| ! | ACATAAGGAAAGGTAAATAA+TGG | + | chr7_1:50506711-50506730 | None:intergenic | 25.0% |
| ! | ATTACAAAGAACATAAGGAA+AGG | + | chr7_1:50506721-50506740 | None:intergenic | 25.0% |
| !!! | GTAATTTGATCTTTGTTGTT+TGG | - | chr7_1:50506736-50506755 | Msa1023160:intron | 25.0% |
| !!! | TCATCTCAATGATTTGTTAT+AGG | - | chr7_1:50506797-50506816 | Msa1023160:intron | 25.0% |
| !!! | TATTAAGTTAAGGTTTGTTG+TGG | - | chr7_1:50506834-50506853 | Msa1023160:intron | 25.0% |
| !!! | TTCACTTTTCTATCTAATGT+AGG | + | chr7_1:50506887-50506906 | None:intergenic | 25.0% |
| !!! | TAATACCATTGTTGGTTTAT+GGG | + | chr7_1:50507034-50507053 | None:intergenic | 25.0% |
| !!! | TTAATACCATTGTTGGTTTA+TGG | + | chr7_1:50507035-50507054 | None:intergenic | 25.0% |
| !!! | GGTTCTTGTTATATTTTGTT+AGG | - | chr7_1:50507232-50507251 | Msa1023160:CDS | 25.0% |
| !! | ATATTTTGTTAGGAAACTAG+TGG | - | chr7_1:50507242-50507261 | Msa1023160:CDS | 25.0% |
| ! | AAGAATAAGAGTGATTTGAA+TGG | + | chr7_1:50507435-50507454 | None:intergenic | 25.0% |
| ! | GGTAAATACTAAATAATACC+TGG | - | chr7_1:50507686-50507705 | Msa1023160:intron | 25.0% |
| ! | AAATTCATTGAATCAGATTC+GGG | - | chr7_1:50507852-50507871 | Msa1023160:intron | 25.0% |
| ! | TTATGCAAACAAAACATAGT+TGG | + | chr7_1:50508549-50508568 | None:intergenic | 25.0% |
| !! | TAATTTTTCCATGTTTGAGA+AGG | - | chr7_1:50508597-50508616 | Msa1023160:intron | 25.0% |
| !! | AATTTTTCCATGTTTGAGAA+GGG | - | chr7_1:50508598-50508617 | Msa1023160:intron | 25.0% |
| !!! | TGCTTTAGAAAAGATTAGAT+GGG | + | chr7_1:50508867-50508886 | None:intergenic | 25.0% |
| ! | TTGATAGAGCATATGAAATT+TGG | - | chr7_1:50508988-50509007 | Msa1023160:intron | 25.0% |
| ! | AATAATAAAACTGCAATCTC+AGG | + | chr7_1:50509194-50509213 | None:intergenic | 25.0% |
| !!! | TATCTTATTTTTGTGATGGT+TGG | - | chr7_1:50509320-50509339 | Msa1023160:intron | 25.0% |
| !!! | ATCTTATTTTTGTGATGGTT+GGG | - | chr7_1:50509321-50509340 | Msa1023160:intron | 25.0% |
| ! | TTAAATTGAACTTCCTGTTA+TGG | - | chr7_1:50509840-50509859 | Msa1023160:intron | 25.0% |
| ! | TAAATTGAACTTCCTGTTAT+GGG | - | chr7_1:50509841-50509860 | Msa1023160:intron | 25.0% |
| ! | AAAAGGCAAATAGACAAAAA+AGG | + | chr7_1:50509918-50509937 | None:intergenic | 25.0% |
| ! | ATAGACAAGTTGTAACAAAA+AGG | + | chr7_1:50509935-50509954 | None:intergenic | 25.0% |
| !!! | AGACAAGGTAATCCTTTTTT+AGG | - | chr7_1:50505221-50505240 | Msa1023160:CDS | 30.0% |
| ! | AAACTGGTAATGAAAGTAAG+TGG | + | chr7_1:50505282-50505301 | None:intergenic | 30.0% |
| !! | CGATTTTAATAAAATGCCCA+GGG | + | chr7_1:50505430-50505449 | None:intergenic | 30.0% |
| ! | CCTGGGCATTTTATTAAAAT+CGG | - | chr7_1:50505428-50505447 | Msa1023160:intron | 30.0% |
| AACAATGCATAGTATATGCA+AGG | + | chr7_1:50505510-50505529 | None:intergenic | 30.0% | |
| TAATCACTTACGCTAAGTAT+TGG | - | chr7_1:50505567-50505586 | Msa1023160:intron | 30.0% | |
| AATCACTTACGCTAAGTATT+GGG | - | chr7_1:50505568-50505587 | Msa1023160:intron | 30.0% | |
| TTGTGCTTCATAAAACTCTT+TGG | - | chr7_1:50505658-50505677 | Msa1023160:intron | 30.0% | |
| TACCTTTCATACACTAAAAG+GGG | + | chr7_1:50505842-50505861 | None:intergenic | 30.0% | |
| CTTACCTTTCATACACTAAA+AGG | + | chr7_1:50505844-50505863 | None:intergenic | 30.0% | |
| ! | CTTTTAGTGTATGAAAGGTA+AGG | - | chr7_1:50505842-50505861 | Msa1023160:intron | 30.0% |
| TTAGTGTAGATGACTCATTA+AGG | - | chr7_1:50505899-50505918 | Msa1023160:intron | 30.0% | |
| TAGTGTAGATGACTCATTAA+GGG | - | chr7_1:50505900-50505919 | Msa1023160:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+AGG | + | chr7_1:50505926-50505945 | None:intergenic | 30.0% | |
| !!! | TTGAGCTTATTTTGAGCTTA+TGG | - | chr7_1:50505933-50505952 | Msa1023160:intron | 30.0% |
| AAACATAATTAAGGCTCGTT+TGG | + | chr7_1:50506119-50506138 | None:intergenic | 30.0% | |
| GAACTTACTTCTTATGTGTT+GGG | - | chr7_1:50506174-50506193 | Msa1023160:intron | 30.0% | |
| GAGAAAAAACTCTCATTCAA+AGG | - | chr7_1:50506234-50506253 | Msa1023160:intron | 30.0% | |
| AGGAGAATATACAAATAGAG+TGG | + | chr7_1:50506319-50506338 | None:intergenic | 30.0% | |
| AAGGGAGTTATAGTAATGAA+AGG | + | chr7_1:50506375-50506394 | None:intergenic | 30.0% | |
| ! | TAACTCCCTTTTATTCTATG+GGG | - | chr7_1:50506385-50506404 | Msa1023160:intron | 30.0% |
| ! | GACTTGTCTGTTTTATATAG+TGG | - | chr7_1:50506455-50506474 | Msa1023160:intron | 30.0% |
| !! | TGTCTGTTTTATATAGTGGA+AGG | - | chr7_1:50506459-50506478 | Msa1023160:intron | 30.0% |
| AATCCATTGAAAGAGCAATA+GGG | + | chr7_1:50506655-50506674 | None:intergenic | 30.0% | |
| AAATCCATTGAAAGAGCAAT+AGG | + | chr7_1:50506656-50506675 | None:intergenic | 30.0% | |
| ! | AAGGAAAGGTAAATAATGGA+AGG | + | chr7_1:50506707-50506726 | None:intergenic | 30.0% |
| TTGAGCAATATATAAGCAAG+AGG | - | chr7_1:50506909-50506928 | Msa1023160:intron | 30.0% | |
| !! | AATACCATTGTTGGTTTATG+GGG | + | chr7_1:50507033-50507052 | None:intergenic | 30.0% |
| !! | ATTGGCTTTAATACCATTGT+TGG | + | chr7_1:50507042-50507061 | None:intergenic | 30.0% |
| AACAATGGTATTAAAGCCAA+TGG | - | chr7_1:50507041-50507060 | Msa1023160:intron | 30.0% | |
| TATTCCCATACTCTTACTTA+AGG | - | chr7_1:50507309-50507328 | Msa1023160:intron | 30.0% | |
| TAAGAGTGATTTGAATGGTA+GGG | + | chr7_1:50507430-50507449 | None:intergenic | 30.0% | |
| ATAAGAGTGATTTGAATGGT+AGG | + | chr7_1:50507431-50507450 | None:intergenic | 30.0% | |
| ! | ATTTGTTGAATTTCAGTGAC+AGG | - | chr7_1:50507599-50507618 | Msa1023160:intron | 30.0% |
| TCAATTACTTAACCTTGTAC+TGG | - | chr7_1:50507640-50507659 | Msa1023160:intron | 30.0% | |
| ! | TATCATTGGCTGTAAAAACA+AGG | + | chr7_1:50507713-50507732 | None:intergenic | 30.0% |
| !! | TTGTAATAAGATGGGTTTTC+AGG | - | chr7_1:50507801-50507820 | Msa1023160:intron | 30.0% |
| AATTCATTGAATCAGATTCG+GGG | - | chr7_1:50507853-50507872 | Msa1023160:intron | 30.0% | |
| TCTAATCAGTAAGCACTAAA+AGG | - | chr7_1:50508116-50508135 | Msa1023160:intron | 30.0% | |
| TAAGCACTAAAAGGAACTTA+TGG | - | chr7_1:50508125-50508144 | Msa1023160:intron | 30.0% | |
| TTGATACTGCTTTAACACTT+TGG | - | chr7_1:50508235-50508254 | Msa1023160:intron | 30.0% | |
| TAATGTTTGTAGATTCACAC+AGG | + | chr7_1:50508384-50508403 | None:intergenic | 30.0% | |
| !! | CAAATAGTTGATTTGCAAAG+GGG | + | chr7_1:50508634-50508653 | None:intergenic | 30.0% |
| !! | CCAAATAGTTGATTTGCAAA+GGG | + | chr7_1:50508635-50508654 | None:intergenic | 30.0% |
| !! | ACCAAATAGTTGATTTGCAA+AGG | + | chr7_1:50508636-50508655 | None:intergenic | 30.0% |
| AGATAGAAGATAGACTTGAA+TGG | - | chr7_1:50508669-50508688 | Msa1023160:intron | 30.0% | |
| AGCACGAAAACAAAATATCA+TGG | + | chr7_1:50508771-50508790 | None:intergenic | 30.0% | |
| !! | CTGCTTTAGAAAAGATTAGA+TGG | + | chr7_1:50508868-50508887 | None:intergenic | 30.0% |
| ATTTCAGTGTTTCATGCTTT+GGG | + | chr7_1:50508897-50508916 | None:intergenic | 30.0% | |
| AATTTCAGTGTTTCATGCTT+TGG | + | chr7_1:50508898-50508917 | None:intergenic | 30.0% | |
| ! | TAGTTGTCTTGTTACTATGT+TGG | - | chr7_1:50508961-50508980 | Msa1023160:intron | 30.0% |
| TCAGATGAATTGTTGAGAAA+GGG | - | chr7_1:50509080-50509099 | Msa1023160:intron | 30.0% | |
| !! | TTGTGTAAAGTATCGTTGTT+TGG | + | chr7_1:50509224-50509243 | None:intergenic | 30.0% |
| TTTACACAATTTCTGTGTTG+AGG | - | chr7_1:50509235-50509254 | Msa1023160:intron | 30.0% | |
| AATGAAAAATGCAGCTAAAC+AGG | + | chr7_1:50509285-50509304 | None:intergenic | 30.0% | |
| ! | ATTTAGCTCACTAGTGAAAA+AGG | + | chr7_1:50509375-50509394 | None:intergenic | 30.0% |
| AATTTCACTGAGTTAAAGCA+TGG | - | chr7_1:50509534-50509553 | Msa1023160:intron | 30.0% | |
| ATTTCACTGAGTTAAAGCAT+GGG | - | chr7_1:50509535-50509554 | Msa1023160:intron | 30.0% | |
| !!! | TACTGTTTTTGCTAAAATGC+AGG | - | chr7_1:50509580-50509599 | Msa1023160:intron | 30.0% |
| TTAGTAACTAAACTGATGAG+AGG | + | chr7_1:50509741-50509760 | None:intergenic | 30.0% | |
| ! | AGGGAGAAAAGAAACAGTTT+TGG | - | chr7_1:50505148-50505167 | Msa1023160:three_prime_UTR | 35.0% |
| TTGGCAAAATTCGTTGACAA+AGG | - | chr7_1:50505173-50505192 | Msa1023160:three_prime_UTR | 35.0% | |
| !! | CCGATTTTAATAAAATGCCC+AGG | + | chr7_1:50505431-50505450 | None:intergenic | 35.0% |
| ! | TAAAATCGGCTCATGTTTCA+CGG | - | chr7_1:50505442-50505461 | Msa1023160:intron | 35.0% |
| !!! | TCACGGCTTAATCACTTTTT+TGG | - | chr7_1:50505459-50505478 | Msa1023160:intron | 35.0% |
| ! | ATCACTTACGCTAAGTATTG+GGG | - | chr7_1:50505569-50505588 | Msa1023160:intron | 35.0% |
| TCCGTGTAAATGCAAACATT+GGG | + | chr7_1:50505702-50505721 | None:intergenic | 35.0% | |
| GATGTAATAACTGTCCAGTT+TGG | - | chr7_1:50505750-50505769 | Msa1023160:intron | 35.0% | |
| AATAACTGTCCAGTTTGGAT+TGG | - | chr7_1:50505755-50505774 | Msa1023160:intron | 35.0% | |
| CGAACTTACTTCTTATGTGT+TGG | - | chr7_1:50506173-50506192 | Msa1023160:intron | 35.0% | |
| TCACTTAGACTTGTAAACGT+TGG | + | chr7_1:50506294-50506313 | None:intergenic | 35.0% | |
| !! | AACTTGTTTTCCGCCAAATA+CGG | + | chr7_1:50506498-50506517 | None:intergenic | 35.0% |
| GAGAAGCCAAACATATTGTT+AGG | + | chr7_1:50506621-50506640 | None:intergenic | 35.0% | |
| CAGAATCTAGACTATCAGAA+AGG | + | chr7_1:50506681-50506700 | None:intergenic | 35.0% | |
| CATCTTTACCCAAAACCTTA+AGG | + | chr7_1:50506951-50506970 | None:intergenic | 35.0% | |
| !!! | TAAGGTTTTGGGTAAAGATG+TGG | - | chr7_1:50506951-50506970 | Msa1023160:intron | 35.0% |
| !! | ATACCATTGTTGGTTTATGG+GGG | + | chr7_1:50507032-50507051 | None:intergenic | 35.0% |
| TTAAAGCCAATGGTTGAACA+AGG | - | chr7_1:50507051-50507070 | Msa1023160:intron | 35.0% | |
| TAAAGCCAATGGTTGAACAA+GGG | - | chr7_1:50507052-50507071 | Msa1023160:intron | 35.0% | |
| AACAAGAACCCAAAACAACA+AGG | + | chr7_1:50507222-50507241 | None:intergenic | 35.0% | |
| ! | CATGCCTTAAGTAAGAGTAT+GGG | + | chr7_1:50507316-50507335 | None:intergenic | 35.0% |
| TCATGCCTTAAGTAAGAGTA+TGG | + | chr7_1:50507317-50507336 | None:intergenic | 35.0% | |
| TGAAACCATCAAAGAAGTTG+TGG | - | chr7_1:50507334-50507353 | Msa1023160:intron | 35.0% | |
| GAAACCATCAAAGAAGTTGT+GGG | - | chr7_1:50507335-50507354 | Msa1023160:intron | 35.0% | |
| !! | TAATGAGAGTTTGCTATGAG+TGG | + | chr7_1:50507473-50507492 | None:intergenic | 35.0% |
| AGTGAGAATAGTGATTTGAG+AGG | + | chr7_1:50507508-50507527 | None:intergenic | 35.0% | |
| TTTGCATCCTATTGTTTGCA+TGG | - | chr7_1:50507551-50507570 | Msa1023160:intron | 35.0% | |
| TTGCATCCTATTGTTTGCAT+GGG | - | chr7_1:50507552-50507571 | Msa1023160:intron | 35.0% | |
| TTGTTACCCATGCAAACAAT+AGG | + | chr7_1:50507561-50507580 | None:intergenic | 35.0% | |
| TTTCAGGATTCAGGATTAGA+TGG | - | chr7_1:50507817-50507836 | Msa1023160:intron | 35.0% | |
| AGGATTAGATGGCAATAAAG+TGG | - | chr7_1:50507828-50507847 | Msa1023160:intron | 35.0% | |
| !!! | AGCAGTAACACTGCTTTTTT+GGG | + | chr7_1:50508002-50508021 | None:intergenic | 35.0% |
| !!! | AAGCAGTAACACTGCTTTTT+TGG | + | chr7_1:50508003-50508022 | None:intergenic | 35.0% |
| TGTTAAAGCAGTATCAACGT+GGG | + | chr7_1:50508232-50508251 | None:intergenic | 35.0% | |
| CTCAATAAGCTTGACAAGAA+AGG | + | chr7_1:50508430-50508449 | None:intergenic | 35.0% | |
| ! | CTTGAATTACAGTTTTCCGA+GGG | + | chr7_1:50508523-50508542 | None:intergenic | 35.0% |
| ! | TCTTGAATTACAGTTTTCCG+AGG | + | chr7_1:50508524-50508543 | None:intergenic | 35.0% |
| CCCTTTGCAAATCAACTATT+TGG | - | chr7_1:50508632-50508651 | Msa1023160:intron | 35.0% | |
| AACTTCCATGAATAACTGTC+TGG | - | chr7_1:50508919-50508938 | Msa1023160:intron | 35.0% | |
| !!! | AGATGTTTTGTTTGCCTAAC+CGG | - | chr7_1:50509026-50509045 | Msa1023160:intron | 35.0% |
| GTCAGATGAATTGTTGAGAA+AGG | - | chr7_1:50509079-50509098 | Msa1023160:intron | 35.0% | |
| CAGATGAATTGTTGAGAAAG+GGG | - | chr7_1:50509081-50509100 | Msa1023160:intron | 35.0% | |
| TACATACAAGAACTTCCCAT+TGG | + | chr7_1:50509127-50509146 | None:intergenic | 35.0% | |
| AAACAGTAGAGTTCAAAGAG+TGG | + | chr7_1:50509568-50509587 | None:intergenic | 35.0% | |
| TTATCCACACATTCAGTCTT+AGG | + | chr7_1:50509690-50509709 | None:intergenic | 35.0% | |
| TAGATGACAATGTGATAGAC+TGG | - | chr7_1:50509876-50509895 | Msa1023160:five_prime_UTR | 35.0% | |
| GGCAAATAGACAAAAAAGGA+AGG | + | chr7_1:50509914-50509933 | None:intergenic | 35.0% | |
| !!! | CGGCTTAATCACTTTTTTGG+TGG | - | chr7_1:50505462-50505481 | Msa1023160:intron | 40.0% |
| !!! | ATCACTTTTTTGGTGGTGTC+CGG | - | chr7_1:50505469-50505488 | Msa1023160:intron | 40.0% |
| CATAGTATATGCAAGGTCAG+TGG | + | chr7_1:50505503-50505522 | None:intergenic | 40.0% | |
| !! | TCACTTACGCTAAGTATTGG+GGG | - | chr7_1:50505570-50505589 | Msa1023160:intron | 40.0% |
| ! | AGTATTGGGGGCTTAACTTT+AGG | - | chr7_1:50505582-50505601 | Msa1023160:intron | 40.0% |
| ! | TCTTTGGTGCAGTTGAATGA+AGG | - | chr7_1:50505674-50505693 | Msa1023160:intron | 40.0% |
| GCCCAATGTTTGCATTTACA+CGG | - | chr7_1:50505698-50505717 | Msa1023160:intron | 40.0% | |
| GTCCGTGTAAATGCAAACAT+TGG | + | chr7_1:50505703-50505722 | None:intergenic | 40.0% | |
| AGCTAGAAACCAATCCAAAC+TGG | + | chr7_1:50505767-50505786 | None:intergenic | 40.0% | |
| ! | AGCCCCTTTTAGTGTATGAA+AGG | - | chr7_1:50505837-50505856 | Msa1023160:intron | 40.0% |
| GAGCAGTGATTCTGTTGTAA+AGG | + | chr7_1:50506265-50506284 | None:intergenic | 40.0% | |
| GCACTCCCCATAGAATAAAA+GGG | + | chr7_1:50506393-50506412 | None:intergenic | 40.0% | |
| AGCACTCCCCATAGAATAAA+AGG | + | chr7_1:50506394-50506413 | None:intergenic | 40.0% | |
| CGTGATGATATTCCCGTATT+TGG | - | chr7_1:50506482-50506501 | Msa1023160:intron | 40.0% | |
| GATGATATTCCCGTATTTGG+CGG | - | chr7_1:50506485-50506504 | Msa1023160:intron | 40.0% | |
| !! | ACTTGTTTTCCGCCAAATAC+GGG | + | chr7_1:50506497-50506516 | None:intergenic | 40.0% |
| GTATTTGGCGGAAAACAAGT+TGG | - | chr7_1:50506497-50506516 | Msa1023160:intron | 40.0% | |
| !! | CCTTAAGGCATTGGGTTTAT+GGG | + | chr7_1:50506936-50506955 | None:intergenic | 40.0% |
| !! | ACCTTAAGGCATTGGGTTTA+TGG | + | chr7_1:50506937-50506956 | None:intergenic | 40.0% |
| ! | AACCCAATGCCTTAAGGTTT+TGG | - | chr7_1:50506939-50506958 | Msa1023160:intron | 40.0% |
| ! | ACCCAATGCCTTAAGGTTTT+GGG | - | chr7_1:50506940-50506959 | Msa1023160:intron | 40.0% |
| ! | ACCCAAAACCTTAAGGCATT+GGG | + | chr7_1:50506944-50506963 | None:intergenic | 40.0% |
| TACCCAAAACCTTAAGGCAT+TGG | + | chr7_1:50506945-50506964 | None:intergenic | 40.0% | |
| !! | TACCATTGTTGGTTTATGGG+GGG | + | chr7_1:50507031-50507050 | None:intergenic | 40.0% |
| TTGACACCAACCACATGAAT+GGG | + | chr7_1:50507134-50507153 | None:intergenic | 40.0% | |
| !! | CAACAAGGCTTTGGGTTTAT+GGG | + | chr7_1:50507207-50507226 | None:intergenic | 40.0% |
| !! | ACAACAAGGCTTTGGGTTTA+TGG | + | chr7_1:50507208-50507227 | None:intergenic | 40.0% |
| !!! | AACCCAAAGCCTTGTTGTTT+TGG | - | chr7_1:50507210-50507229 | Msa1023160:intron | 40.0% |
| !!! | ACCCAAAGCCTTGTTGTTTT+GGG | - | chr7_1:50507211-50507230 | Msa1023160:intron | 40.0% |
| ACCCAAAACAACAAGGCTTT+GGG | + | chr7_1:50507215-50507234 | None:intergenic | 40.0% | |
| AACCCAAAACAACAAGGCTT+TGG | + | chr7_1:50507216-50507235 | None:intergenic | 40.0% | |
| TTGTTAGGAAACTAGTGGTC+AGG | - | chr7_1:50507247-50507266 | Msa1023160:CDS | 40.0% | |
| CCAATAGATCAAGCAACCAA+CGG | - | chr7_1:50507394-50507413 | Msa1023160:intron | 40.0% | |
| AAAGCACAACGACAAGAAGA+GGG | + | chr7_1:50507533-50507552 | None:intergenic | 40.0% | |
| ! | AAAAGCACAACGACAAGAAG+AGG | + | chr7_1:50507534-50507553 | None:intergenic | 40.0% |
| TTGTTTGCATGGGTAACAAG+AGG | - | chr7_1:50507562-50507581 | Msa1023160:intron | 40.0% | |
| TCAGTGACAGGAACTTTGAA+AGG | - | chr7_1:50507611-50507630 | Msa1023160:intron | 40.0% | |
| !! | AAGATGGGTTTTCAGGATTC+AGG | - | chr7_1:50507808-50507827 | Msa1023160:intron | 40.0% |
| GTGTTAAAGCAGTATCAACG+TGG | + | chr7_1:50508233-50508252 | None:intergenic | 40.0% | |
| CAGTCACTCAACATTGACAA+AGG | - | chr7_1:50508312-50508331 | Msa1023160:intron | 40.0% | |
| CTTGTCAAGCTTATTGAGCT+TGG | - | chr7_1:50508432-50508451 | Msa1023160:intron | 40.0% | |
| TAATACAGTAGTCCTGCAGT+TGG | - | chr7_1:50508489-50508508 | Msa1023160:intron | 40.0% | |
| GTTAACTCCCTTCTCAAACA+TGG | + | chr7_1:50508608-50508627 | None:intergenic | 40.0% | |
| ! | GTAGTTTTCAACGGATCATC+AGG | + | chr7_1:50508800-50508819 | None:intergenic | 40.0% |
| ! | GTCTGATCGGTAGTTTTCAA+CGG | + | chr7_1:50508809-50508828 | None:intergenic | 40.0% |
| TCAGACCAGACAGTTATTCA+TGG | + | chr7_1:50508927-50508946 | None:intergenic | 40.0% | |
| GCTAAAATGCAGGTTTGTAG+AGG | - | chr7_1:50509590-50509609 | Msa1023160:intron | 40.0% | |
| GAGAATACAGAGACGATCTG+AGG | + | chr7_1:50504969-50504988 | None:intergenic | 45.0% | |
| CTCTCGCACTGTTTAAACAG+CGG | - | chr7_1:50504986-50505005 | Msa1023160:three_prime_UTR | 45.0% | |
| ! | GGTGTTCAAGTTAAGCTCAC+CGG | - | chr7_1:50505194-50505213 | Msa1023160:three_prime_UTR | 45.0% |
| AGGATTACCTTGTCTACCAC+CGG | + | chr7_1:50505216-50505235 | None:intergenic | 45.0% | |
| AGTAATCAGAGTTCGAACCC+TGG | - | chr7_1:50505410-50505429 | Msa1023160:intron | 45.0% | |
| GTAATCAGAGTTCGAACCCT+GGG | - | chr7_1:50505411-50505430 | Msa1023160:intron | 45.0% | |
| !!! | TCACTTTTTTGGTGGTGTCC+GGG | - | chr7_1:50505470-50505489 | Msa1023160:intron | 45.0% |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr7_1:50505532-50505551 | Msa1023160:intron | 45.0% | |
| !! | TGGGGCGTTTTTGTTGAGAA+TGG | - | chr7_1:50505630-50505649 | Msa1023160:intron | 45.0% |
| !! | GGGGCGTTTTTGTTGAGAAT+GGG | - | chr7_1:50505631-50505650 | Msa1023160:intron | 45.0% |
| TGACTCATTAAGGGCCTGTT+TGG | - | chr7_1:50505909-50505928 | Msa1023160:intron | 45.0% | |
| GCTCCCTATTGCTCTTTCAA+TGG | - | chr7_1:50506649-50506668 | Msa1023160:intron | 45.0% | |
| CCCATAAACCCAATGCCTTA+AGG | - | chr7_1:50506933-50506952 | Msa1023160:intron | 45.0% | |
| TCGAACCCTTGTTCAACCAT+TGG | + | chr7_1:50507060-50507079 | None:intergenic | 45.0% | |
| TCCTTGTGTCGAAAGTCTAC+CGG | - | chr7_1:50507085-50507104 | Msa1023160:intron | 45.0% | |
| GTTGACACCAACCACATGAA+TGG | + | chr7_1:50507135-50507154 | None:intergenic | 45.0% | |
| AGGAAACTAGTGGTCAGGTA+TGG | - | chr7_1:50507252-50507271 | Msa1023160:CDS | 45.0% | |
| ACTAGTGGTCAGGTATGGAT+AGG | - | chr7_1:50507257-50507276 | Msa1023160:CDS | 45.0% | |
| TGCTCCCACAACTTCTTTGA+TGG | + | chr7_1:50507342-50507361 | None:intergenic | 45.0% | |
| ! | CAAAGAAGTTGTGGGAGCAT+AGG | - | chr7_1:50507343-50507362 | Msa1023160:intron | 45.0% |
| ! | CCGTTGGTTGCTTGATCTAT+TGG | + | chr7_1:50507397-50507416 | None:intergenic | 45.0% |
| GAGTGATTTGAATGGTAGGG+AGG | + | chr7_1:50507427-50507446 | None:intergenic | 45.0% | |
| GAAGCTGTTGAGTTTCTGAG+AGG | - | chr7_1:50507665-50507684 | Msa1023160:intron | 45.0% | |
| TGGCTGTAAAAACAAGGTCC+AGG | + | chr7_1:50507707-50507726 | None:intergenic | 45.0% | |
| !! | GAGTGACTGTCTTTTCAAGC+AGG | + | chr7_1:50508301-50508320 | None:intergenic | 45.0% |
| AGGGTGAATTTACCAACTGC+AGG | + | chr7_1:50508504-50508523 | None:intergenic | 45.0% | |
| !! | GCAGTTGGTAAATTCACCCT+CGG | - | chr7_1:50508504-50508523 | Msa1023160:intron | 45.0% |
| ACCGATCAGACAAGAAGTCT+TGG | - | chr7_1:50508818-50508837 | Msa1023160:intron | 45.0% | |
| GCCAAGACTTCTTGTCTGAT+CGG | + | chr7_1:50508822-50508841 | None:intergenic | 45.0% | |
| TCATGACAAGTTAGCCGGTT+AGG | + | chr7_1:50509043-50509062 | None:intergenic | 45.0% | |
| ACGAGTCATGACAAGTTAGC+CGG | + | chr7_1:50509048-50509067 | None:intergenic | 45.0% | |
| TTCTGTGTTGAGGAGTTGCA+AGG | - | chr7_1:50509245-50509264 | Msa1023160:intron | 45.0% | |
| TCGTGTAGCTTCAAACTTGC+AGG | + | chr7_1:50509462-50509481 | None:intergenic | 45.0% | |
| ! | AAAGGGGTTGGCAATCTCAT+CGG | + | chr7_1:50509651-50509670 | None:intergenic | 45.0% |
| ATCTGGTTGAAGAAAGGGGT+TGG | + | chr7_1:50509663-50509682 | None:intergenic | 45.0% | |
| AACCCCTTTCTTCAACCAGA+TGG | - | chr7_1:50509662-50509681 | Msa1023160:intron | 45.0% | |
| ACCCCTTTCTTCAACCAGAT+GGG | - | chr7_1:50509663-50509682 | Msa1023160:intron | 45.0% | |
| !! | TGTCAGAAGCGTTAACGCAT+AGG | + | chr7_1:50509795-50509814 | None:intergenic | 45.0% |
| AGCGTTTGAACTCCCATAAC+AGG | + | chr7_1:50509856-50509875 | None:intergenic | 45.0% | |
| !! | TAAAAAAAAAAAAAAAAAAC+TGG | + | chr7_1:50505298-50505317 | None:intergenic | 5.0% |
| !! | AATAATTAAAGAAAAAAAAA+AGG | + | chr7_1:50505349-50505368 | None:intergenic | 5.0% |
| !!! | CTTTAATTATTATTTTTTAT+AGG | - | chr7_1:50505358-50505377 | Msa1023160:intron | 5.0% |
| !! | AAAAAAAAAAAAAAACAATT+GGG | + | chr7_1:50507879-50507898 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAAACAAT+TGG | + | chr7_1:50507880-50507899 | None:intergenic | 5.0% |
| GAGTGACTGAGACTTCGACA+TGG | - | chr7_1:50505018-50505037 | Msa1023160:three_prime_UTR | 50.0% | |
| ! | GTTCAAGTTAAGCTCACCGG+TGG | - | chr7_1:50505197-50505216 | Msa1023160:three_prime_UTR | 50.0% |
| !!! | CACTTTTTTGGTGGTGTCCG+GGG | - | chr7_1:50505471-50505490 | Msa1023160:intron | 50.0% |
| AAGGTCAGTGGTTTGAACCC+CGG | + | chr7_1:50505491-50505510 | None:intergenic | 50.0% | |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr7_1:50505533-50505552 | Msa1023160:intron | 50.0% | |
| !! | TGGCGGAAAACAAGTTGGTG+TGG | - | chr7_1:50506502-50506521 | Msa1023160:intron | 50.0% |
| !! | GGCGGAAAACAAGTTGGTGT+GGG | - | chr7_1:50506503-50506522 | Msa1023160:intron | 50.0% |
| ! | GAGCAATAGGGAGCACACAA+AGG | + | chr7_1:50506643-50506662 | None:intergenic | 50.0% |
| TGGTGTCCAACTCACTTGTG+TGG | - | chr7_1:50506971-50506990 | Msa1023160:intron | 50.0% | |
| GAGCAACCACACAAGTGAGT+TGG | + | chr7_1:50506980-50506999 | None:intergenic | 50.0% | |
| CTCACTTGTGTGGTTGCTCT+TGG | - | chr7_1:50506981-50507000 | Msa1023160:intron | 50.0% | |
| CTCCCCCCATAAACCAACAA+TGG | - | chr7_1:50507026-50507045 | Msa1023160:intron | 50.0% | |
| TGGTTGAACAAGGGTTCGAC+CGG | - | chr7_1:50507061-50507080 | Msa1023160:intron | 50.0% | |
| AGACTTTCGACACAAGGAGC+CGG | + | chr7_1:50507083-50507102 | None:intergenic | 50.0% | |
| TCCGGTAGACTTTCGACACA+AGG | + | chr7_1:50507089-50507108 | None:intergenic | 50.0% | |
| GAAAGTCTACCGGACAATGC+TGG | - | chr7_1:50507095-50507114 | Msa1023160:intron | 50.0% | |
| !! | CATGTGGTTGGTGTCAACAG+CGG | - | chr7_1:50507137-50507156 | Msa1023160:intron | 50.0% |
| ! | CAACAGCGGAGGTGTATTAG+AGG | - | chr7_1:50507151-50507170 | Msa1023160:intron | 50.0% |
| CAACAGCTTCGTCCAGTACA+AGG | + | chr7_1:50507655-50507674 | None:intergenic | 50.0% | |
| ! | TCTCATCGGTACCATCGGTT+GGG | + | chr7_1:50509637-50509656 | None:intergenic | 50.0% |
| ATCTCATCGGTACCATCGGT+TGG | + | chr7_1:50509638-50509657 | None:intergenic | 50.0% | |
| GGCAATCTCATCGGTACCAT+CGG | + | chr7_1:50509642-50509661 | None:intergenic | 50.0% | |
| CCCCATCTGGTTGAAGAAAG+GGG | + | chr7_1:50509667-50509686 | None:intergenic | 50.0% | |
| CCCCTTTCTTCAACCAGATG+GGG | - | chr7_1:50509664-50509683 | Msa1023160:intron | 50.0% | |
| GCCCCATCTGGTTGAAGAAA+GGG | + | chr7_1:50509668-50509687 | None:intergenic | 50.0% | |
| ATTCAGTCTTAGGCCCCATC+TGG | + | chr7_1:50509680-50509699 | None:intergenic | 50.0% | |
| ! | AGACGATCTGAGGTGCAGGT+GGG | + | chr7_1:50504959-50504978 | None:intergenic | 55.0% |
| ! | ACAGAGACGATCTGAGGTGC+AGG | + | chr7_1:50504963-50504982 | None:intergenic | 55.0% |
| AAGCTCACCGGTGGTAGACA+AGG | - | chr7_1:50505206-50505225 | Msa1023160:exon | 55.0% | |
| CCAACTGAGCTAAGCTCACG+GGG | - | chr7_1:50505534-50505553 | Msa1023160:intron | 55.0% | |
| TGTTGTGGCAAGTGTGTGCG+AGG | - | chr7_1:50506849-50506868 | Msa1023160:intron | 55.0% | |
| TGGTTGCTCTTGGCCCAATG+TGG | - | chr7_1:50506991-50507010 | Msa1023160:intron | 55.0% | |
| GCCCAATGTGGATGATCCCT+GGG | - | chr7_1:50507003-50507022 | Msa1023160:intron | 55.0% | |
| GCCCAGGGATCATCCACATT+GGG | + | chr7_1:50507007-50507026 | None:intergenic | 55.0% | |
| AGCCCAGGGATCATCCACAT+TGG | + | chr7_1:50507008-50507027 | None:intergenic | 55.0% | |
| ACCGGACAATGCTGGTCAAG+CGG | - | chr7_1:50507103-50507122 | Msa1023160:intron | 55.0% | |
| GCAGGTCCCATTCATGTGGT+TGG | - | chr7_1:50507125-50507144 | Msa1023160:intron | 55.0% | |
| GTAGGGAGGTTGTAAGCCGT+TGG | + | chr7_1:50507413-50507432 | None:intergenic | 55.0% | |
| ! | CTCATCGGTACCATCGGTTG+GGG | + | chr7_1:50509636-50509655 | None:intergenic | 55.0% |
| GGCCCCATCTGGTTGAAGAA+AGG | + | chr7_1:50509669-50509688 | None:intergenic | 55.0% | |
| GGGGCCTAAGACTGAATGTG+TGG | - | chr7_1:50509683-50509702 | Msa1023160:CDS | 55.0% | |
| CGCATAGGAGAGTCACGACT+AGG | + | chr7_1:50509780-50509799 | None:intergenic | 55.0% | |
| ! | GAGACGATCTGAGGTGCAGG+TGG | + | chr7_1:50504960-50504979 | None:intergenic | 60.0% |
| CCCCGTGAGCTTAGCTCAGT+TGG | + | chr7_1:50505537-50505556 | None:intergenic | 60.0% | |
| GGCCCAATGTGGATGATCCC+TGG | - | chr7_1:50507002-50507021 | Msa1023160:intron | 60.0% | |
| TGGTTTATGGGGGGAGCCCA+GGG | + | chr7_1:50507022-50507041 | None:intergenic | 60.0% | |
| TTGGTTTATGGGGGGAGCCC+AGG | + | chr7_1:50507023-50507042 | None:intergenic | 60.0% | |
| GCCGCTTGACCAGCATTGTC+CGG | + | chr7_1:50507107-50507126 | None:intergenic | 60.0% | |
| GACAATGCTGGTCAAGCGGC+AGG | - | chr7_1:50507107-50507126 | Msa1023160:intron | 60.0% | |
| AGCGGCAGGTCCCATTCATG+TGG | - | chr7_1:50507121-50507140 | Msa1023160:intron | 60.0% | |
| !! | GTGGTTGGTGTCAACAGCGG+AGG | - | chr7_1:50507140-50507159 | Msa1023160:intron | 60.0% |
| ATGCTCGTGTCCCCAACCGA+TGG | - | chr7_1:50509623-50509642 | Msa1023160:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 50504943 | 50509967 | 50504943 | ID=Msa1023160;Name=Msa1023160 |
| chr7_1 | mRNA | 50504943 | 50509967 | 50504943 | ID=Msa1023160-mRNA-1;Parent=Msa1023160;Name=Msa1023160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=94|1|1|1|1|1|5|276|99 |
| chr7_1 | exon | 50504943 | 50505308 | 50504943 | ID=Msa1023160-mRNA-1:exon:9923;Parent=Msa1023160-mRNA-1 |
| chr7_1 | exon | 50506063 | 50506115 | 50506063 | ID=Msa1023160-mRNA-1:exon:9922;Parent=Msa1023160-mRNA-1 |
| chr7_1 | exon | 50507224 | 50507295 | 50507224 | ID=Msa1023160-mRNA-1:exon:9921;Parent=Msa1023160-mRNA-1 |
| chr7_1 | exon | 50509683 | 50509764 | 50509683 | ID=Msa1023160-mRNA-1:exon:9920;Parent=Msa1023160-mRNA-1 |
| chr7_1 | exon | 50509871 | 50509967 | 50509871 | ID=Msa1023160-mRNA-1:exon:9919;Parent=Msa1023160-mRNA-1 |
| chr7_1 | five_prime_UTR | 50509874 | 50509967 | 50509874 | ID=Msa1023160-mRNA-1:five_prime_utr;Parent=Msa1023160-mRNA-1 |
| chr7_1 | CDS | 50509871 | 50509873 | 50509871 | ID=Msa1023160-mRNA-1:cds;Parent=Msa1023160-mRNA-1 |
| chr7_1 | CDS | 50509683 | 50509764 | 50509683 | ID=Msa1023160-mRNA-1:cds;Parent=Msa1023160-mRNA-1 |
| chr7_1 | CDS | 50507224 | 50507295 | 50507224 | ID=Msa1023160-mRNA-1:cds;Parent=Msa1023160-mRNA-1 |
| chr7_1 | CDS | 50506063 | 50506115 | 50506063 | ID=Msa1023160-mRNA-1:cds;Parent=Msa1023160-mRNA-1 |
| chr7_1 | CDS | 50505219 | 50505308 | 50505219 | ID=Msa1023160-mRNA-1:cds;Parent=Msa1023160-mRNA-1 |
| chr7_1 | three_prime_UTR | 50504943 | 50505218 | 50504943 | ID=Msa1023160-mRNA-1:three_prime_utr;Parent=Msa1023160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
