Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470530 | XP_013461302.1 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 4.01e-81 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470530 | sp|Q5Q995|KTAP2_IXOSC | 38.168 | 131 | 71 | 2 | 4 | 124 | 5 | 135 | 3.39e-21 | 85.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470530 | I3T7J3 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 1.92e-81 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0470530 | 0.838899 | 2.185827e-57 | -8.615850e-47 |
| Msa0004540 | Msa0470530 | 0.802252 | 6.128493e-49 | -8.615850e-47 |
| Msa0012940 | Msa0470530 | 0.821317 | 4.305528e-53 | -8.615850e-47 |
| Msa0014830 | Msa0470530 | 0.810530 | 1.101209e-50 | -8.615850e-47 |
| Msa0027630 | Msa0470530 | 0.818861 | 1.571373e-52 | -8.615850e-47 |
| Msa0029260 | Msa0470530 | 0.815476 | 9.067684e-52 | -8.615850e-47 |
| Msa0029630 | Msa0470530 | 0.864074 | 1.578891e-64 | -8.615850e-47 |
| Msa0033880 | Msa0470530 | 0.833925 | 4.028877e-56 | -8.615850e-47 |
| Msa0038000 | Msa0470530 | 0.807384 | 5.190444e-50 | -8.615850e-47 |
| Msa0046740 | Msa0470530 | 0.817128 | 3.871880e-52 | -8.615850e-47 |
| Msa0048180 | Msa0470530 | 0.841743 | 3.948819e-58 | -8.615850e-47 |
| Msa0068020 | Msa0470530 | 0.804227 | 2.389668e-49 | -8.615850e-47 |
| Msa0075170 | Msa0470530 | 0.803475 | 3.424250e-49 | -8.615850e-47 |
| Msa0076040 | Msa0470530 | 0.824584 | 7.457973e-54 | -8.615850e-47 |
| Msa0079920 | Msa0470530 | 0.846539 | 2.038143e-59 | -8.615850e-47 |
| Msa0090520 | Msa0470530 | 0.803895 | 2.802487e-49 | -8.615850e-47 |
| Msa0091610 | Msa0470530 | 0.840792 | 7.023859e-58 | -8.615850e-47 |
| Msa0093010 | Msa0470530 | 0.863233 | 2.881131e-64 | -8.615850e-47 |
| Msa0093850 | Msa0470530 | 0.827359 | 1.634475e-54 | -8.615850e-47 |
| Msa0103240 | Msa0470530 | 0.844448 | 7.512150e-59 | -8.615850e-47 |
| Msa0115370 | Msa0470530 | 0.840252 | 9.726559e-58 | -8.615850e-47 |
| Msa0123510 | Msa0470530 | 0.817837 | 2.680297e-52 | -8.615850e-47 |
| Msa0125450 | Msa0470530 | 0.857102 | 2.051351e-62 | -8.615850e-47 |
| Msa0125540 | Msa0470530 | 0.845296 | 4.437339e-59 | -8.615850e-47 |
| Msa0127850 | Msa0470530 | 0.843745 | 1.159583e-58 | -8.615850e-47 |
| Msa0128860 | Msa0470530 | 0.816334 | 5.835453e-52 | -8.615850e-47 |
| Msa0130240 | Msa0470530 | 0.822915 | 1.834852e-53 | -8.615850e-47 |
| Msa0131590 | Msa0470530 | 0.843186 | 1.635526e-58 | -8.615850e-47 |
| Msa0136120 | Msa0470530 | 0.818539 | 1.859772e-52 | -8.615850e-47 |
| Msa0137990 | Msa0470530 | 0.802669 | 5.026656e-49 | -8.615850e-47 |
| Msa0138360 | Msa0470530 | 0.836842 | 7.381018e-57 | -8.615850e-47 |
| Msa0147980 | Msa0470530 | 0.849206 | 3.751118e-60 | -8.615850e-47 |
| Msa0149190 | Msa0470530 | 0.808430 | 3.108807e-50 | -8.615850e-47 |
| Msa0165950 | Msa0470530 | 0.800276 | 1.555249e-48 | -8.615850e-47 |
| Msa0166460 | Msa0470530 | 0.807993 | 3.852260e-50 | -8.615850e-47 |
| Msa0166750 | Msa0470530 | 0.805811 | 1.114897e-49 | -8.615850e-47 |
| Msa0169300 | Msa0470530 | 0.815520 | 8.865139e-52 | -8.615850e-47 |
| Msa0172980 | Msa0470530 | 0.809382 | 1.944820e-50 | -8.615850e-47 |
| Msa0174000 | Msa0470530 | 0.821675 | 3.559751e-53 | -8.615850e-47 |
| Msa0174730 | Msa0470530 | 0.814643 | 1.387679e-51 | -8.615850e-47 |
| Msa0174770 | Msa0470530 | 0.812165 | 4.864123e-51 | -8.615850e-47 |
| Msa0177960 | Msa0470530 | 0.830930 | 2.224506e-55 | -8.615850e-47 |
| Msa0180020 | Msa0470530 | 0.803155 | 3.990057e-49 | -8.615850e-47 |
| Msa0181610 | Msa0470530 | 0.818701 | 1.708652e-52 | -8.615850e-47 |
| Msa0183900 | Msa0470530 | 0.803186 | 3.931686e-49 | -8.615850e-47 |
| Msa0188350 | Msa0470530 | 0.826763 | 2.269802e-54 | -8.615850e-47 |
| Msa0199880 | Msa0470530 | 0.804923 | 1.711172e-49 | -8.615850e-47 |
| Msa0206690 | Msa0470530 | 0.823865 | 1.100266e-53 | -8.615850e-47 |
| Msa0214550 | Msa0470530 | 0.825250 | 5.193146e-54 | -8.615850e-47 |
| Msa0218830 | Msa0470530 | 0.800753 | 1.243285e-48 | -8.615850e-47 |
| Msa0226460 | Msa0470530 | 0.819884 | 9.188502e-53 | -8.615850e-47 |
| Msa0236620 | Msa0470530 | 0.816844 | 4.484915e-52 | -8.615850e-47 |
| Msa0376280 | Msa0470530 | 0.810646 | 1.039516e-50 | -8.615850e-47 |
| Msa0376820 | Msa0470530 | 0.811312 | 7.456308e-51 | -8.615850e-47 |
| Msa0384670 | Msa0470530 | 0.801562 | 8.490251e-49 | -8.615850e-47 |
| Msa0385500 | Msa0470530 | 0.819366 | 1.206024e-52 | -8.615850e-47 |
| Msa0389510 | Msa0470530 | 0.804682 | 1.921137e-49 | -8.615850e-47 |
| Msa0419720 | Msa0470530 | 0.800765 | 1.235943e-48 | -8.615850e-47 |
| Msa0423750 | Msa0470530 | 0.898835 | 3.591900e-77 | -8.615850e-47 |
| Msa0434570 | Msa0470530 | 0.815103 | 1.097395e-51 | -8.615850e-47 |
| Msa0434770 | Msa0470530 | 0.814957 | 1.182461e-51 | -8.615850e-47 |
| Msa0439230 | Msa0470530 | 0.811528 | 6.691623e-51 | -8.615850e-47 |
| Msa0443390 | Msa0470530 | 0.843097 | 1.727772e-58 | -8.615850e-47 |
| Msa0456430 | Msa0470530 | 0.819803 | 9.585568e-53 | -8.615850e-47 |
| Msa0466350 | Msa0470530 | 0.800620 | 1.322964e-48 | -8.615850e-47 |
| Msa0470530 | Msa0471960 | 0.801268 | 9.756461e-49 | -8.615850e-47 |
| Msa0470530 | Msa0472130 | 0.808167 | 3.537612e-50 | -8.615850e-47 |
| Msa0470530 | Msa0478580 | 0.821201 | 4.578120e-53 | -8.615850e-47 |
| Msa0470530 | Msa0481480 | 0.824215 | 9.106811e-54 | -8.615850e-47 |
| Msa0470530 | Msa0484740 | 0.841141 | 5.688600e-58 | -8.615850e-47 |
| Msa0470530 | Msa0503530 | 0.811117 | 8.219890e-51 | -8.615850e-47 |
| Msa0470530 | Msa0508630 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
| Msa0470530 | Msa0511770 | 0.828132 | 1.065629e-54 | -8.615850e-47 |
| Msa0470530 | Msa0518030 | 0.815321 | 9.816432e-52 | -8.615850e-47 |
| Msa0470530 | Msa0521050 | 0.808015 | 3.811578e-50 | -8.615850e-47 |
| Msa0470530 | Msa0524500 | 0.824948 | 6.120075e-54 | -8.615850e-47 |
| Msa0470530 | Msa0526540 | 0.819560 | 1.089244e-52 | -8.615850e-47 |
| Msa0470530 | Msa0527020 | 0.813390 | 2.622450e-51 | -8.615850e-47 |
| Msa0470530 | Msa0527150 | 0.835706 | 1.435092e-56 | -8.615850e-47 |
| Msa0470530 | Msa0527190 | 0.831074 | 2.051131e-55 | -8.615850e-47 |
| Msa0470530 | Msa0531250 | 0.812521 | 4.066051e-51 | -8.615850e-47 |
| Msa0470530 | Msa0547990 | 0.827718 | 1.340416e-54 | -8.615850e-47 |
| Msa0470530 | Msa0552810 | 0.823174 | 1.596626e-53 | -8.615850e-47 |
| Msa0470530 | Msa0559870 | 0.806253 | 8.998265e-50 | -8.615850e-47 |
| Msa0470530 | Msa0576940 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0470530 | Msa0580230 | 0.819341 | 1.222070e-52 | -8.615850e-47 |
| Msa0470530 | Msa0580280 | 0.821286 | 4.378137e-53 | -8.615850e-47 |
| Msa0470530 | Msa0581070 | 0.846355 | 2.288577e-59 | -8.615850e-47 |
| Msa0470530 | Msa0581110 | 0.843342 | 1.485951e-58 | -8.615850e-47 |
| Msa0470530 | Msa0593700 | 0.819573 | 1.082059e-52 | -8.615850e-47 |
| Msa0470530 | Msa0603570 | 0.810258 | 1.260632e-50 | -8.615850e-47 |
| Msa0470530 | Msa0610390 | 0.825590 | 4.314875e-54 | -8.615850e-47 |
| Msa0470530 | Msa0614510 | 0.828551 | 8.440809e-55 | -8.615850e-47 |
| Msa0470530 | Msa0615580 | 0.806157 | 9.427384e-50 | -8.615850e-47 |
| Msa0470530 | Msa0619860 | 0.841851 | 3.697202e-58 | -8.615850e-47 |
| Msa0470530 | Msa0620200 | 0.804592 | 2.006272e-49 | -8.615850e-47 |
| Msa0470530 | Msa0628420 | 0.816541 | 5.243430e-52 | -8.615850e-47 |
| Msa0470530 | Msa0631250 | 0.838606 | 2.603017e-57 | -8.615850e-47 |
| Msa0470530 | Msa0633570 | 0.816638 | 4.987553e-52 | -8.615850e-47 |
| Msa0470530 | Msa0638480 | 0.822385 | 2.436802e-53 | -8.615850e-47 |
| Msa0470530 | Msa0644030 | 0.832436 | 9.466119e-56 | -8.615850e-47 |
| Msa0470530 | Msa0647820 | 0.822375 | 2.449964e-53 | -8.615850e-47 |
| Msa0470530 | Msa0650920 | 0.814410 | 1.563043e-51 | -8.615850e-47 |
| Msa0470530 | Msa0662630 | 0.842452 | 2.563956e-58 | -8.615850e-47 |
| Msa0470530 | Msa0665440 | 0.800862 | 1.180870e-48 | -8.615850e-47 |
| Msa0470530 | Msa0666230 | 0.856521 | 3.040727e-62 | -8.615850e-47 |
| Msa0470530 | Msa0687630 | 0.814078 | 1.850476e-51 | -8.615850e-47 |
| Msa0470530 | Msa0690540 | 0.810738 | 9.930048e-51 | -8.615850e-47 |
| Msa0470530 | Msa0692840 | 0.800086 | 1.699339e-48 | -8.615850e-47 |
| Msa0470530 | Msa0692940 | 0.812409 | 4.301975e-51 | -8.615850e-47 |
| Msa0470530 | Msa0693210 | 0.823420 | 1.398314e-53 | -8.615850e-47 |
| Msa0470530 | Msa0694990 | 0.809953 | 1.466434e-50 | -8.615850e-47 |
| Msa0470530 | Msa0699190 | 0.800275 | 1.555858e-48 | -8.615850e-47 |
| Msa0470530 | Msa0704660 | 0.854800 | 9.670857e-62 | -8.615850e-47 |
| Msa0470530 | Msa0706500 | 0.867794 | 1.052661e-65 | -8.615850e-47 |
| Msa0470530 | Msa0718740 | 0.813879 | 2.046684e-51 | -8.615850e-47 |
| Msa0470530 | Msa0785130 | 0.813848 | 2.078872e-51 | -8.615850e-47 |
| Msa0470530 | Msa0788770 | 0.807821 | 4.191265e-50 | -8.615850e-47 |
| Msa0470530 | Msa0808800 | 0.900291 | 8.482756e-78 | -8.615850e-47 |
| Msa0470530 | Msa0822170 | 0.828423 | 9.065718e-55 | -8.615850e-47 |
| Msa0470530 | Msa0822180 | 0.812792 | 3.547574e-51 | -8.615850e-47 |
| Msa0470530 | Msa0824640 | 0.806025 | 1.005069e-49 | -8.615850e-47 |
| Msa0470530 | Msa0825270 | 0.808807 | 2.583217e-50 | -8.615850e-47 |
| Msa0470530 | Msa0826500 | 0.810652 | 1.036252e-50 | -8.615850e-47 |
| Msa0470530 | Msa0838370 | 0.824535 | 7.658324e-54 | -8.615850e-47 |
| Msa0470530 | Msa0858440 | 0.838039 | 3.643849e-57 | -8.615850e-47 |
| Msa0470530 | Msa0864010 | 0.800809 | 1.210854e-48 | -8.615850e-47 |
| Msa0470530 | Msa0865570 | 0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa0470530 | Msa0872250 | 0.802566 | 5.278736e-49 | -8.615850e-47 |
| Msa0470530 | Msa0880470 | 0.804302 | 2.305879e-49 | -8.615850e-47 |
| Msa0470530 | Msa0884290 | 0.816161 | 6.376353e-52 | -8.615850e-47 |
| Msa0470530 | Msa0888940 | 0.800469 | 1.420217e-48 | -8.615850e-47 |
| Msa0470530 | Msa0898760 | 0.810595 | 1.065908e-50 | -8.615850e-47 |
| Msa0470530 | Msa0928120 | 0.815738 | 7.927812e-52 | -8.615850e-47 |
| Msa0470530 | Msa0943170 | 0.847038 | 1.489109e-59 | -8.615850e-47 |
| Msa0470530 | Msa0943440 | 0.804082 | 2.561707e-49 | -8.615850e-47 |
| Msa0470530 | Msa0958000 | 0.819501 | 1.123646e-52 | -8.615850e-47 |
| Msa0470530 | Msa0960830 | 0.838871 | 2.222210e-57 | -8.615850e-47 |
| Msa0470530 | Msa0963020 | 0.836667 | 8.181926e-57 | -8.615850e-47 |
| Msa0470530 | Msa0980540 | 0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0470530 | Msa0980940 | 0.813814 | 2.115048e-51 | -8.615850e-47 |
| Msa0470530 | Msa0994290 | 0.838142 | 3.427006e-57 | -8.615850e-47 |
| Msa0470530 | Msa0997430 | 0.811574 | 6.540724e-51 | -8.615850e-47 |
| Msa0470530 | Msa1019240 | 0.836475 | 9.158909e-57 | -8.615850e-47 |
| Msa0470530 | Msa1019260 | 0.843091 | 1.734459e-58 | -8.615850e-47 |
| Msa0470530 | Msa1023160 | 0.803005 | 4.285353e-49 | -8.615850e-47 |
| Msa0470530 | Msa1025940 | 0.811906 | 5.538271e-51 | -8.615850e-47 |
| Msa0470530 | Msa1029070 | 0.804360 | 2.242828e-49 | -8.615850e-47 |
| Msa0470530 | Msa1039900 | 0.864294 | 1.349040e-64 | -8.615850e-47 |
| Msa0470530 | Msa1055010 | 0.811328 | 7.395044e-51 | -8.615850e-47 |
| Msa0470530 | Msa1070390 | 0.813299 | 2.745544e-51 | -8.615850e-47 |
| Msa0470530 | Msa1072710 | 0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa0470530 | Msa1104210 | 0.829849 | 4.089863e-55 | -8.615850e-47 |
| Msa0470530 | Msa1121680 | 0.802701 | 4.951432e-49 | -8.615850e-47 |
| Msa0470530 | Msa1123350 | 0.843082 | 1.743864e-58 | -8.615850e-47 |
| Msa0470530 | Msa1124070 | 0.823699 | 1.203621e-53 | -8.615850e-47 |
| Msa0470530 | Msa1126510 | 0.815878 | 7.376131e-52 | -8.615850e-47 |
| Msa0470530 | Msa1126770 | 0.817799 | 2.733986e-52 | -8.615850e-47 |
| Msa0470530 | Msa1126830 | 0.844083 | 9.415996e-59 | -8.615850e-47 |
| Msa0470530 | Msa1127590 | 0.841519 | 4.524617e-58 | -8.615850e-47 |
| Msa0470530 | Msa1130980 | 0.812140 | 4.923859e-51 | -8.615850e-47 |
| Msa0470530 | Msa1131170 | 0.813500 | 2.480968e-51 | -8.615850e-47 |
| Msa0470530 | Msa1131560 | 0.820875 | 5.443357e-53 | -8.615850e-47 |
| Msa0470530 | Msa1165780 | 0.845368 | 4.243211e-59 | -8.615850e-47 |
| Msa0470530 | Msa1166860 | 0.801977 | 6.978080e-49 | -8.615850e-47 |
| Msa0470530 | Msa1166870 | 0.821766 | 3.390066e-53 | -8.615850e-47 |
| Msa0470530 | Msa1184370 | 0.834688 | 2.593023e-56 | -8.615850e-47 |
| Msa0470530 | Msa1188560 | 0.800875 | 1.173898e-48 | -8.615850e-47 |
| Msa0470530 | Msa1192850 | 0.829377 | 5.326957e-55 | -8.615850e-47 |
| Msa0470530 | Msa1201830 | 0.803527 | 3.340469e-49 | -8.615850e-47 |
| Msa0470530 | Msa1202580 | 0.818395 | 2.004794e-52 | -8.615850e-47 |
| Msa0470530 | Msa1206090 | 0.832502 | 9.112330e-56 | -8.615850e-47 |
| Msa0470530 | Msa1206650 | 0.820896 | 5.381964e-53 | -8.615850e-47 |
| Msa0470530 | Msa1208020 | 0.840418 | 8.802544e-58 | -8.615850e-47 |
| Msa0470530 | Msa1227690 | 0.836672 | 8.156017e-57 | -8.615850e-47 |
| Msa0470530 | Msa1230580 | 0.833204 | 6.100078e-56 | -8.615850e-47 |
| Msa0470530 | Msa1233850 | 0.803828 | 2.893074e-49 | -8.615850e-47 |
| Msa0470530 | Msa1235250 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
| Msa0470530 | Msa1251160 | 0.812551 | 4.005100e-51 | -8.615850e-47 |
| Msa0470530 | Msa1256470 | 0.809482 | 1.851509e-50 | -8.615850e-47 |
| Msa0470530 | Msa1256770 | 0.802986 | 4.324267e-49 | -8.615850e-47 |
| Msa0470530 | Msa1256950 | 0.809462 | 1.870043e-50 | -8.615850e-47 |
| Msa0470530 | Msa1262890 | 0.834269 | 3.304064e-56 | -8.615850e-47 |
| Msa0470530 | Msa1290450 | 0.812002 | 5.277492e-51 | -8.615850e-47 |
| Msa0470530 | Msa1307950 | 0.825633 | 4.213937e-54 | -8.615850e-47 |
| Msa0470530 | Msa1327490 | 0.827088 | 1.898095e-54 | -8.615850e-47 |
| Msa0470530 | Msa1329510 | 0.810927 | 9.037914e-51 | -8.615850e-47 |
| Msa0470530 | Msa1329540 | 0.831243 | 1.864354e-55 | -8.615850e-47 |
| Msa0470530 | Msa1331250 | 0.841638 | 4.209966e-58 | -8.615850e-47 |
| Msa0470530 | Msa1335940 | 0.807147 | 5.825962e-50 | -8.615850e-47 |
| Msa0470530 | Msa1339730 | 0.819428 | 1.167584e-52 | -8.615850e-47 |
| Msa0470530 | Msa1340480 | 0.809464 | 1.867661e-50 | -8.615850e-47 |
| Msa0470530 | Msa1343290 | 0.818711 | 1.699476e-52 | -8.615850e-47 |
| Msa0470530 | Msa1344850 | 0.810729 | 9.971626e-51 | -8.615850e-47 |
| Msa0470530 | Msa1345450 | 0.800973 | 1.120770e-48 | -8.615850e-47 |
| Msa0470530 | Msa1349570 | 0.801376 | 9.270779e-49 | -8.615850e-47 |
| Msa0470530 | Msa1358480 | 0.831449 | 1.658508e-55 | -8.615850e-47 |
| Msa0470530 | Msa1362420 | 0.843549 | 1.308715e-58 | -8.615850e-47 |
| Msa0470530 | Msa1363330 | 0.816325 | 5.862788e-52 | -8.615850e-47 |
| Msa0470530 | Msa1363860 | 0.802181 | 6.337411e-49 | -8.615850e-47 |
| Msa0470530 | Msa1367590 | 0.803025 | 4.244953e-49 | -8.615850e-47 |
| Msa0470530 | Msa1369150 | 0.810462 | 1.139091e-50 | -8.615850e-47 |
| Msa0470530 | Msa1369190 | 0.847322 | 1.244155e-59 | -8.615850e-47 |
| Msa0470530 | Msa1370860 | 0.801685 | 8.014285e-49 | -8.615850e-47 |
| Msa0470530 | Msa1371520 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0470530 | Msa1374060 | 0.801364 | 9.324893e-49 | -8.615850e-47 |
| Msa0470530 | Msa1376650 | 0.828986 | 6.626410e-55 | -8.615850e-47 |
| Msa0470530 | Msa1379760 | 0.812730 | 3.659666e-51 | -8.615850e-47 |
| Msa0470530 | Msa1382780 | 0.807811 | 4.212669e-50 | -8.615850e-47 |
| Msa0470530 | Msa1386600 | 0.815750 | 7.876731e-52 | -8.615850e-47 |
| Msa0470530 | Msa1404190 | 0.816588 | 5.118897e-52 | -8.615850e-47 |
| Msa0470530 | Msa1411950 | 0.826014 | 3.423023e-54 | -8.615850e-47 |
| Msa0470530 | Msa1413260 | 0.834446 | 2.984006e-56 | -8.615850e-47 |
| Msa0470530 | Msa1418340 | 0.815286 | 9.995236e-52 | -8.615850e-47 |
| Msa0470530 | Msa1425670 | 0.830298 | 3.177021e-55 | -8.615850e-47 |
| Msa0470530 | Msa1434740 | 0.815753 | 7.867491e-52 | -8.615850e-47 |
| Msa0470530 | Msa1435770 | 0.811444 | 6.979308e-51 | -8.615850e-47 |
| Msa0470530 | Msa1438050 | 0.830997 | 2.141935e-55 | -8.615850e-47 |
| Msa0470530 | Msa1442850 | 0.835087 | 2.057868e-56 | -8.615850e-47 |
| Msa0470530 | Msa1443930 | 0.806094 | 9.719556e-50 | -8.615850e-47 |
| Msa0470530 | Msa1450280 | 0.818109 | 2.326483e-52 | -8.615850e-47 |
| Msa0470530 | Msa1456050 | 0.819614 | 1.058682e-52 | -8.615850e-47 |
| Msa0470530 | Msa1459960 | 0.837092 | 6.372393e-57 | -8.615850e-47 |
| Msa0470530 | Msa1462860 | 0.838675 | 2.497949e-57 | -8.615850e-47 |
| Msa0470530 | Msa1462910 | 0.806870 | 6.668094e-50 | -8.615850e-47 |
| Msa0470530 | Msa1465080 | 0.849370 | 3.377348e-60 | -8.615850e-47 |
| Msa0241830 | Msa0470530 | 0.805957 | 1.038786e-49 | -8.615850e-47 |
| Msa0244980 | Msa0470530 | 0.830755 | 2.455596e-55 | -8.615850e-47 |
| Msa0245430 | Msa0470530 | 0.828118 | 1.073720e-54 | -8.615850e-47 |
| Msa0245580 | Msa0470530 | 0.855825 | 4.864498e-62 | -8.615850e-47 |
| Msa0249580 | Msa0470530 | 0.826213 | 3.069226e-54 | -8.615850e-47 |
| Msa0254940 | Msa0470530 | 0.803252 | 3.810236e-49 | -8.615850e-47 |
| Msa0257490 | Msa0470530 | 0.808409 | 3.141676e-50 | -8.615850e-47 |
| Msa0262480 | Msa0470530 | 0.823565 | 1.293399e-53 | -8.615850e-47 |
| Msa0269470 | Msa0470530 | 0.859912 | 2.978390e-63 | -8.615850e-47 |
| Msa0279850 | Msa0470530 | 0.811833 | 5.743638e-51 | -8.615850e-47 |
| Msa0281530 | Msa0470530 | 0.831897 | 1.286749e-55 | -8.615850e-47 |
| Msa0284180 | Msa0470530 | 0.810556 | 1.086816e-50 | -8.615850e-47 |
| Msa0296250 | Msa0470530 | 0.854635 | 1.079636e-61 | -8.615850e-47 |
| Msa0296790 | Msa0470530 | 0.813357 | 2.666258e-51 | -8.615850e-47 |
| Msa0300120 | Msa0470530 | 0.806642 | 7.450107e-50 | -8.615850e-47 |
| Msa0304590 | Msa0470530 | 0.801571 | 8.454987e-49 | -8.615850e-47 |
| Msa0304660 | Msa0470530 | 0.803656 | 3.141815e-49 | -8.615850e-47 |
| Msa0305780 | Msa0470530 | 0.831815 | 1.348031e-55 | -8.615850e-47 |
| Msa0307850 | Msa0470530 | 0.812996 | 3.200590e-51 | -8.615850e-47 |
| Msa0317910 | Msa0470530 | 0.830919 | 2.239222e-55 | -8.615850e-47 |
| Msa0320590 | Msa0470530 | 0.855462 | 6.207081e-62 | -8.615850e-47 |
| Msa0322900 | Msa0470530 | 0.808118 | 3.623865e-50 | -8.615850e-47 |
| Msa0331700 | Msa0470530 | 0.804921 | 1.712278e-49 | -8.615850e-47 |
| Msa0332640 | Msa0470530 | 0.819553 | 1.093577e-52 | -8.615850e-47 |
| Msa0341690 | Msa0470530 | 0.834670 | 2.620990e-56 | -8.615850e-47 |
| Msa0348830 | Msa0470530 | 0.870028 | 1.988218e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470530 | MtrunA17_Chr3g0125171 | 99.200 | 125 | 1 | 0 | 1 | 125 | 1 | 125 | 3.69e-85 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470530 | AT1G77350.1 | 73.770 | 122 | 31 | 1 | 1 | 121 | 1 | 122 | 8.91e-60 | 180 |
| Msa0470530 | AT1G77350.2 | 73.770 | 122 | 31 | 1 | 1 | 121 | 1 | 122 | 8.91e-60 | 180 |
Find 46 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACAATTTCATGGGTAAAT+TGG | 0.199532 | 3_3:-72627535 | Msa0470530:five_prime_UTR |
| TGAGAAGCCATGGCGGGGTC+TGG | 0.324778 | 3_3:-72626689 | Msa0470530:intron |
| CAGTTAGGAGCACAAGAAAT+AGG | 0.332990 | 3_3:+72626546 | None:intergenic |
| AGTACTTACCTACAATTTCA+TGG | 0.359733 | 3_3:-72627544 | Msa0470530:five_prime_UTR |
| CATCTTGTGAATCTTGAGTT+AGG | 0.382414 | 3_3:-72627401 | Msa0470530:intron |
| ATCTTATAAGTTATGATACT+AGG | 0.383609 | 3_3:+72624506 | None:intergenic |
| GAGACAGCCGGTGCAAAATC+TGG | 0.384994 | 3_3:-72625866 | Msa0470530:CDS |
| CAATTTACCCATGAAATTGT+AGG | 0.390611 | 3_3:+72627536 | None:intergenic |
| TGAATGCAGTTTCCTGTTCT+CGG | 0.393893 | 3_3:-72624684 | Msa0470530:intron |
| GCAAAATCTGGCTGGGGTGC+TGG | 0.425345 | 3_3:-72625854 | Msa0470530:intron |
| TCGGAATTATTCACAATACT+TGG | 0.430748 | 3_3:-72626587 | Msa0470530:CDS |
| GAGAAGCCATGGCGGGGTCT+GGG | 0.434467 | 3_3:-72626688 | Msa0470530:intron |
| CTCGGCTGTGTTGCTCTATG+AGG | 0.447834 | 3_3:-72624666 | Msa0470530:CDS |
| TTGCTATGAGAAGCCATGGC+GGG | 0.473545 | 3_3:-72626695 | Msa0470530:intron |
| AGAGCAACACAGCCGAGAAC+AGG | 0.475210 | 3_3:+72624672 | None:intergenic |
| ACGTTCTAGTTTCGTTTCTA+CGG | 0.475682 | 3_3:+72627463 | None:intergenic |
| AGCCGGTGCAAAATCTGGCT+GGG | 0.475968 | 3_3:-72625861 | Msa0470530:CDS |
| CAGCCGGTGCAAAATCTGGC+TGG | 0.479798 | 3_3:-72625862 | Msa0470530:CDS |
| TTGTAAAACTATTGCGACTA+GGG | 0.496217 | 3_3:+72624530 | None:intergenic |
| GATGACAATGAATAGAAGAA+AGG | 0.500365 | 3_3:+72626649 | None:intergenic |
| CGAATACCCAAGGGCAATCT+CGG | 0.501828 | 3_3:+72627486 | None:intergenic |
| TATGAGGTTAACAAGCTCTC+TGG | 0.505681 | 3_3:-72624650 | Msa0470530:CDS |
| TTAAATACCGAGATTGCCCT+TGG | 0.510093 | 3_3:-72627493 | Msa0470530:five_prime_UTR |
| TAGAAGAAAGGAATACATCA+TGG | 0.524516 | 3_3:+72626661 | None:intergenic |
| GTTTCTACGGCGAATACCCA+AGG | 0.531065 | 3_3:+72627476 | None:intergenic |
| TCTTATAAGTTATGATACTA+GGG | 0.531858 | 3_3:+72624507 | None:intergenic |
| GAATTATTCACAATACTTGG+AGG | 0.534232 | 3_3:-72626584 | Msa0470530:CDS |
| GTACTTACCTACAATTTCAT+GGG | 0.535831 | 3_3:-72627543 | Msa0470530:five_prime_UTR |
| AATTATTCACAATACTTGGA+GGG | 0.538766 | 3_3:-72626583 | Msa0470530:CDS |
| ACCATGTAGTGATGCATACT+CGG | 0.544399 | 3_3:+72625549 | None:intergenic |
| GCCGGTGCAAAATCTGGCTG+GGG | 0.558097 | 3_3:-72625860 | Msa0470530:CDS |
| CCGTGGGAAACTTGCATCGT+CGG | 0.565118 | 3_3:-72626606 | Msa0470530:CDS |
| TGCTATGAGAAGCCATGGCG+GGG | 0.568516 | 3_3:-72626694 | Msa0470530:intron |
| TAAATACCGAGATTGCCCTT+GGG | 0.585124 | 3_3:-72627492 | Msa0470530:five_prime_UTR |
| CACTTCAAGAAATGTACCGT+GGG | 0.587600 | 3_3:-72626622 | Msa0470530:CDS |
| GGAGTCACTTGTTGCAACAG+CGG | 0.601261 | 3_3:+72624625 | None:intergenic |
| ACCGAGTATGCATCACTACA+TGG | 0.601750 | 3_3:-72625550 | Msa0470530:intron |
| GTTGTAAAACTATTGCGACT+AGG | 0.603827 | 3_3:+72624529 | None:intergenic |
| GGAACTCCCAGACCCCGCCA+TGG | 0.620572 | 3_3:+72626682 | None:intergenic |
| AACGAAACTAGAACGTGTGA+AGG | 0.623245 | 3_3:-72627456 | Msa0470530:five_prime_UTR |
| GGTACATTTCTTGAAGTGAG+AGG | 0.637005 | 3_3:+72626627 | None:intergenic |
| TTTCTACGGCGAATACCCAA+GGG | 0.644078 | 3_3:+72627477 | None:intergenic |
| CCGACGATGCAAGTTTCCCA+CGG | 0.661665 | 3_3:+72626606 | None:intergenic |
| TCACTTCAAGAAATGTACCG+TGG | 0.674064 | 3_3:-72626623 | Msa0470530:CDS |
| ATGTAGTGATGCATACTCGG+TGG | 0.725698 | 3_3:+72625552 | None:intergenic |
| TTTGCTATGAGAAGCCATGG+CGG | 0.727809 | 3_3:-72626696 | Msa0470530:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATATTTAACTATTTTTA+GGG | - | chr3_3:72624392-72624411 | Msa0470530:three_prime_UTR | 10.0% |
| !!! | ACTTAATTTTACAATTATAT+TGG | - | chr3_3:72627535-72627554 | Msa0470530:five_prime_UTR | 10.0% |
| !!! | GATCATATTTAACTATTTTT+AGG | - | chr3_3:72624391-72624410 | Msa0470530:three_prime_UTR | 15.0% |
| !!! | TCATATTTAACTATTTTTAG+GGG | - | chr3_3:72624393-72624412 | Msa0470530:three_prime_UTR | 15.0% |
| !!! | TGTTTATTTTTTGTTTTCTT+CGG | - | chr3_3:72624883-72624902 | Msa0470530:intron | 15.0% |
| !!! | TTACTTTGTTATAACTAATA+AGG | - | chr3_3:72625174-72625193 | Msa0470530:intron | 15.0% |
| !!! | TACTTTGTTATAACTAATAA+GGG | - | chr3_3:72625175-72625194 | Msa0470530:intron | 15.0% |
| !! | TAAAATAGATGTTATAGAAA+TGG | + | chr3_3:72625641-72625660 | None:intergenic | 15.0% |
| !!! | AACTATTTCTTAAAAAGAAA+AGG | - | chr3_3:72626546-72626565 | Msa0470530:intron | 15.0% |
| !!! | ACTATTTCTTAAAAAGAAAA+GGG | - | chr3_3:72626547-72626566 | Msa0470530:CDS | 15.0% |
| !!! | TTTTCAATGTAATTTGTTAT+TGG | + | chr3_3:72627009-72627028 | None:intergenic | 15.0% |
| !!! | ATTTTACAATTATATTGGTA+TGG | - | chr3_3:72627540-72627559 | Msa0470530:five_prime_UTR | 15.0% |
| !! | AACATTATTATTAGATCCAT+TGG | - | chr3_3:72624835-72624854 | Msa0470530:intron | 20.0% |
| !! | ACATTATTATTAGATCCATT+GGG | - | chr3_3:72624836-72624855 | Msa0470530:intron | 20.0% |
| !! | AGAAAACAAAAAATAAACAC+CGG | + | chr3_3:72624882-72624901 | None:intergenic | 20.0% |
| !!! | GTTTATTTTTTGTTTTCTTC+GGG | - | chr3_3:72624884-72624903 | Msa0470530:intron | 20.0% |
| !!! | TTTATTTTTTGTTTTCTTCG+GGG | - | chr3_3:72624885-72624904 | Msa0470530:intron | 20.0% |
| !!! | AATTAAGATACAATTTTCGT+TGG | - | chr3_3:72624932-72624951 | Msa0470530:intron | 20.0% |
| !!! | ATGATTCTTTTTATGTTTCT+CGG | - | chr3_3:72625539-72625558 | Msa0470530:intron | 20.0% |
| !! | TAATAAGATCATATAGTAGA+AGG | - | chr3_3:72625563-72625582 | Msa0470530:CDS | 20.0% |
| !! | TTAATACTATTGTTAGTGTT+TGG | - | chr3_3:72625658-72625677 | Msa0470530:intron | 20.0% |
| !! | ATTTATTTGTACTTGTATGA+AGG | - | chr3_3:72625713-72625732 | Msa0470530:intron | 20.0% |
| !! | GATAAAAGTAGTAACTTTAT+TGG | + | chr3_3:72625826-72625845 | None:intergenic | 20.0% |
| !!! | TAATTTAAAGCAGACTATTT+GGG | + | chr3_3:72625991-72626010 | None:intergenic | 20.0% |
| !!! | ATAATTTAAAGCAGACTATT+TGG | + | chr3_3:72625992-72626011 | None:intergenic | 20.0% |
| !! | AAAACAGAATGAGTATTAAT+TGG | - | chr3_3:72626236-72626255 | Msa0470530:intron | 20.0% |
| !!! | TTCATTTCTTTTATTCTTTC+TGG | - | chr3_3:72626320-72626339 | Msa0470530:intron | 20.0% |
| !!! | TTTAAAATATATGCGTGAAT+TGG | + | chr3_3:72626351-72626370 | None:intergenic | 20.0% |
| !! | TCCTATTTGTTCATTAATAA+GGG | + | chr3_3:72626498-72626517 | None:intergenic | 20.0% |
| !! | TTCCTATTTGTTCATTAATA+AGG | + | chr3_3:72626499-72626518 | None:intergenic | 20.0% |
| !! | CAATGATACAATTAATTAAG+CGG | - | chr3_3:72626632-72626651 | Msa0470530:CDS | 20.0% |
| !! | AATGATACAATTAATTAAGC+GGG | - | chr3_3:72626633-72626652 | Msa0470530:CDS | 20.0% |
| !! | ATAGTTAGTAATACATCTAA+TGG | - | chr3_3:72626865-72626884 | Msa0470530:intron | 20.0% |
| !! | TAGTTAGTAATACATCTAAT+GGG | - | chr3_3:72626866-72626885 | Msa0470530:intron | 20.0% |
| !! | TTACATTGAAAAAGAAAATC+TGG | - | chr3_3:72627017-72627036 | Msa0470530:intron | 20.0% |
| !!! | ATATAACATGCTTTTACTTT+AGG | - | chr3_3:72627064-72627083 | Msa0470530:intron | 20.0% |
| !! | TCTTATAAGTTATGATACTA+GGG | + | chr3_3:72627491-72627510 | None:intergenic | 20.0% |
| !! | ATCTTATAAGTTATGATACT+AGG | + | chr3_3:72627492-72627511 | None:intergenic | 20.0% |
| !! | GTAATATAAAAATGACTGAT+TGG | + | chr3_3:72627598-72627617 | None:intergenic | 20.0% |
| !!! | ATCAGTCATTTTTATATTAC+AGG | - | chr3_3:72627598-72627617 | Msa0470530:five_prime_UTR | 20.0% |
| ! | TTGCAACATTGAAAAAGATA+CGG | - | chr3_3:72624422-72624441 | Msa0470530:three_prime_UTR | 25.0% |
| ! | GAAATAAAATGAAGATCCAT+TGG | + | chr3_3:72624684-72624703 | None:intergenic | 25.0% |
| !! | TGATCTCGTAATTTGAAATT+AGG | - | chr3_3:72624757-72624776 | Msa0470530:intron | 25.0% |
| ! | TCAATATAAGTCAAACCAAA+CGG | - | chr3_3:72625014-72625033 | Msa0470530:intron | 25.0% |
| ! | AATTATTCACAATACTTGGA+GGG | - | chr3_3:72625412-72625431 | Msa0470530:intron | 25.0% |
| ! | AAGCTTCAAAGATAAGAAAA+TGG | + | chr3_3:72625503-72625522 | None:intergenic | 25.0% |
| !! | TGATTCTTTTTATGTTTCTC+GGG | - | chr3_3:72625540-72625559 | Msa0470530:intron | 25.0% |
| !! | CATTTGATGCATTTTATTAG+AGG | + | chr3_3:72625743-72625762 | None:intergenic | 25.0% |
| ! | TTCAATTTACAAAATGGAAC+TGG | + | chr3_3:72625783-72625802 | None:intergenic | 25.0% |
| ! | TCTGACTTCAATTTACAAAA+TGG | + | chr3_3:72625789-72625808 | None:intergenic | 25.0% |
| ! | TTTATCACTTCATAGTTCAT+AGG | - | chr3_3:72625840-72625859 | Msa0470530:intron | 25.0% |
| ! | CACATATATATATATCTTCC+AGG | - | chr3_3:72626019-72626038 | Msa0470530:intron | 25.0% |
| !! | CTCACATTTACATTACATTT+TGG | - | chr3_3:72626082-72626101 | Msa0470530:intron | 25.0% |
| ! | TCCCTTATTAATGAACAAAT+AGG | - | chr3_3:72626494-72626513 | Msa0470530:intron | 25.0% |
| ! | CGCTTAATTAATTGTATCAT+TGG | + | chr3_3:72626634-72626653 | None:intergenic | 25.0% |
| ! | ATGATACAATTAATTAAGCG+GGG | - | chr3_3:72626634-72626653 | Msa0470530:CDS | 25.0% |
| !!! | ACTATAAGTTGATTAGTTGA+AGG | + | chr3_3:72626703-72626722 | None:intergenic | 25.0% |
| ! | TCAACACATTATATCTGTTT+AGG | + | chr3_3:72626796-72626815 | None:intergenic | 25.0% |
| ! | TTTATAAGAACATGTTCCAA+AGG | + | chr3_3:72626900-72626919 | None:intergenic | 25.0% |
| ! | TTGAATTCTAGATATTCTGT+TGG | - | chr3_3:72626974-72626993 | Msa0470530:intron | 25.0% |
| ! | TGAATTCTAGATATTCTGTT+GGG | - | chr3_3:72626975-72626994 | Msa0470530:intron | 25.0% |
| !!! | GCTATTTTACAAAAAGCTTT+AGG | + | chr3_3:72627109-72627128 | None:intergenic | 25.0% |
| ! | TAAATAACAGACTATGACAA+TGG | + | chr3_3:72627160-72627179 | None:intergenic | 25.0% |
| ! | CATTAGAATAACATCAACAA+TGG | + | chr3_3:72627282-72627301 | None:intergenic | 25.0% |
| TGCAACATTGAAAAAGATAC+GGG | - | chr3_3:72624423-72624442 | Msa0470530:three_prime_UTR | 30.0% | |
| AGTACTTACCTACAATTTCA+TGG | - | chr3_3:72624451-72624470 | Msa0470530:three_prime_UTR | 30.0% | |
| GTACTTACCTACAATTTCAT+GGG | - | chr3_3:72624452-72624471 | Msa0470530:three_prime_UTR | 30.0% | |
| CAATTTACCCATGAAATTGT+AGG | + | chr3_3:72624462-72624481 | None:intergenic | 30.0% | |
| CTACAATTTCATGGGTAAAT+TGG | - | chr3_3:72624460-72624479 | Msa0470530:three_prime_UTR | 30.0% | |
| CAATATAAGTCAAACCAAAC+GGG | - | chr3_3:72625015-72625034 | Msa0470530:intron | 30.0% | |
| ! | TCATTCTTGAGTGATACTTT+TGG | - | chr3_3:72625235-72625254 | Msa0470530:intron | 30.0% |
| !!! | TGAGTGATACTTTTGGTTTT+CGG | - | chr3_3:72625242-72625261 | Msa0470530:intron | 30.0% |
| TAGAAGAAAGGAATACATCA+TGG | + | chr3_3:72625337-72625356 | None:intergenic | 30.0% | |
| GATGACAATGAATAGAAGAA+AGG | + | chr3_3:72625349-72625368 | None:intergenic | 30.0% | |
| TCGGAATTATTCACAATACT+TGG | - | chr3_3:72625408-72625427 | Msa0470530:intron | 30.0% | |
| GAATTATTCACAATACTTGG+AGG | - | chr3_3:72625411-72625430 | Msa0470530:intron | 30.0% | |
| AAGAATCATTAGCAAACTAC+AGG | + | chr3_3:72625528-72625547 | None:intergenic | 30.0% | |
| TGTTATAGAAATGGAGTAAG+TGG | + | chr3_3:72625632-72625651 | None:intergenic | 30.0% | |
| TCCTACTTTAACAAATACAG+AGG | - | chr3_3:72625890-72625909 | Msa0470530:intron | 30.0% | |
| ! | TCCTCTGTATTTGTTAAAGT+AGG | + | chr3_3:72625894-72625913 | None:intergenic | 30.0% |
| TATTACTTGAATAGAGATCC+TGG | + | chr3_3:72626040-72626059 | None:intergenic | 30.0% | |
| CAAATAGGAAGTAATTCACT+AGG | - | chr3_3:72626509-72626528 | Msa0470530:intron | 30.0% | |
| ! | CTTATTAAAAGCACAACAAC+AGG | - | chr3_3:72627190-72627209 | Msa0470530:intron | 30.0% |
| TTGTAAAACTATTGCGACTA+GGG | + | chr3_3:72627468-72627487 | None:intergenic | 30.0% | |
| !! | ACGTTCTAGTTTCGTTTCTA+CGG | + | chr3_3:72624535-72624554 | None:intergenic | 35.0% |
| CATCTTGTGAATCTTGAGTT+AGG | - | chr3_3:72624594-72624613 | Msa0470530:exon | 35.0% | |
| !!! | CATTGGTTTTGTAATTCCCT+TGG | + | chr3_3:72624667-72624686 | None:intergenic | 35.0% |
| CAAGGGAATTACAAAACCAA+TGG | - | chr3_3:72624665-72624684 | Msa0470530:CDS | 35.0% | |
| ! | TTCATTTTGCAAGCGAAATC+CGG | - | chr3_3:72624860-72624879 | Msa0470530:intron | 35.0% |
| !! | TTTACAGTCAAGTTGAGAAC+TGG | + | chr3_3:72625059-72625078 | None:intergenic | 35.0% |
| ACTAGAGATTCCAAGCTATT+GGG | - | chr3_3:72625138-72625157 | Msa0470530:intron | 35.0% | |
| TTCTATAGAACCCAATAGCT+TGG | + | chr3_3:72625151-72625170 | None:intergenic | 35.0% | |
| TCACTTCATAGTTCATAGGT+TGG | - | chr3_3:72625844-72625863 | Msa0470530:intron | 35.0% | |
| !!! | ACATTTTGGTTGCAGTTCAT+TGG | - | chr3_3:72626096-72626115 | Msa0470530:intron | 35.0% |
| ! | GCAGTTCATTGGAAATTTTC+AGG | - | chr3_3:72626107-72626126 | Msa0470530:intron | 35.0% |
| AGTCTGTCATCAACATTCAT+CGG | + | chr3_3:72626180-72626199 | None:intergenic | 35.0% | |
| CTTGAGAATCACATGAAACA+CGG | - | chr3_3:72626288-72626307 | Msa0470530:intron | 35.0% | |
| TTGAGAATCACATGAAACAC+GGG | - | chr3_3:72626289-72626308 | Msa0470530:intron | 35.0% | |
| ATGACTGCAAAAAGAAGACA+CGG | + | chr3_3:72626384-72626403 | None:intergenic | 35.0% | |
| TCATTAATAAGGGAGAGAGA+GGG | + | chr3_3:72626488-72626507 | None:intergenic | 35.0% | |
| TTCATTAATAAGGGAGAGAG+AGG | + | chr3_3:72626489-72626508 | None:intergenic | 35.0% | |
| ATTGGATCATTTAGACCAGA+GGG | + | chr3_3:72626616-72626635 | None:intergenic | 35.0% | |
| ! | AAGGTGATTTAAAATCAGCC+AGG | + | chr3_3:72626684-72626703 | None:intergenic | 35.0% |
| ! | CCATTTCTTTTACAAGCCAA+CGG | + | chr3_3:72626827-72626846 | None:intergenic | 35.0% |
| !! | TTGGCTTGTAAAAGAAATGG+TGG | - | chr3_3:72626827-72626846 | Msa0470530:intron | 35.0% |
| CATGAGCTTATGAAGGTAAA+GGG | + | chr3_3:72626944-72626963 | None:intergenic | 35.0% | |
| ACATGAGCTTATGAAGGTAA+AGG | + | chr3_3:72626945-72626964 | None:intergenic | 35.0% | |
| TACCTTCATAAGCTCATGTA+TGG | - | chr3_3:72626946-72626965 | Msa0470530:intron | 35.0% | |
| TACCATACATGAGCTTATGA+AGG | + | chr3_3:72626951-72626970 | None:intergenic | 35.0% | |
| ! | ACTCTACTAGTTGCTTTACT+TGG | + | chr3_3:72627131-72627150 | None:intergenic | 35.0% |
| ! | TTAAAAGCACAACAACAGGA+TGG | - | chr3_3:72627194-72627213 | Msa0470530:intron | 35.0% |
| GTTGTAAAACTATTGCGACT+AGG | + | chr3_3:72627469-72627488 | None:intergenic | 35.0% | |
| TTAAATACCGAGATTGCCCT+TGG | - | chr3_3:72624502-72624521 | Msa0470530:three_prime_UTR | 40.0% | |
| TAAATACCGAGATTGCCCTT+GGG | - | chr3_3:72624503-72624522 | Msa0470530:three_prime_UTR | 40.0% | |
| AACGAAACTAGAACGTGTGA+AGG | - | chr3_3:72624539-72624558 | Msa0470530:three_prime_UTR | 40.0% | |
| TGAGAAAATGCGAGATTCCA+AGG | - | chr3_3:72624647-72624666 | Msa0470530:CDS | 40.0% | |
| GAGAAAATGCGAGATTCCAA+GGG | - | chr3_3:72624648-72624667 | Msa0470530:CDS | 40.0% | |
| TTGAGAACTTCAGATCGATG+TGG | - | chr3_3:72624806-72624825 | Msa0470530:intron | 40.0% | |
| GCTTGCAAAATGAAACCCAA+TGG | + | chr3_3:72624854-72624873 | None:intergenic | 40.0% | |
| CACTAGAGATTCCAAGCTAT+TGG | - | chr3_3:72625137-72625156 | Msa0470530:intron | 40.0% | |
| TGGCTTCTCATAGCAAAGAA+TGG | + | chr3_3:72625296-72625315 | None:intergenic | 40.0% | |
| ! | TTCTTTGCTATGAGAAGCCA+TGG | - | chr3_3:72625296-72625315 | Msa0470530:intron | 40.0% |
| GGTACATTTCTTGAAGTGAG+AGG | + | chr3_3:72625371-72625390 | None:intergenic | 40.0% | |
| TCACTTCAAGAAATGTACCG+TGG | - | chr3_3:72625372-72625391 | Msa0470530:intron | 40.0% | |
| CACTTCAAGAAATGTACCGT+GGG | - | chr3_3:72625373-72625392 | Msa0470530:intron | 40.0% | |
| ! | CAGTTAGGAGCACAAGAAAT+AGG | + | chr3_3:72625452-72625471 | None:intergenic | 40.0% |
| GATTGTGAGAACTCACAGTT+AGG | + | chr3_3:72625467-72625486 | None:intergenic | 40.0% | |
| ACCATGTAGTGATGCATACT+CGG | + | chr3_3:72626449-72626468 | None:intergenic | 40.0% | |
| ! | AGAAAAGGGAGAAAGTGTGA+CGG | - | chr3_3:72626561-72626580 | Msa0470530:CDS | 40.0% |
| TTGGATCATTTAGACCAGAG+GGG | + | chr3_3:72626615-72626634 | None:intergenic | 40.0% | |
| CATTGGATCATTTAGACCAG+AGG | + | chr3_3:72626617-72626636 | None:intergenic | 40.0% | |
| AAATCAGCCAGGTTTAGAGA+AGG | + | chr3_3:72626673-72626692 | None:intergenic | 40.0% | |
| !! | TGTGTTGATTACATGACCGT+TGG | - | chr3_3:72626808-72626827 | Msa0470530:intron | 40.0% |
| !! | CCGTTGGCTTGTAAAAGAAA+TGG | - | chr3_3:72626824-72626843 | Msa0470530:intron | 40.0% |
| TGAATGCAGTTTCCTGTTCT+CGG | - | chr3_3:72627311-72627330 | Msa0470530:intron | 40.0% | |
| TATGAGGTTAACAAGCTCTC+TGG | - | chr3_3:72627345-72627364 | Msa0470530:intron | 40.0% | |
| TCCAGAACCAAAAAGCAAAG+TGG | - | chr3_3:72627390-72627409 | Msa0470530:intron | 40.0% | |
| CCAGAACCAAAAAGCAAAGT+GGG | - | chr3_3:72627391-72627410 | Msa0470530:intron | 40.0% | |
| TTTCTACGGCGAATACCCAA+GGG | + | chr3_3:72624521-72624540 | None:intergenic | 45.0% | |
| ! | AACTGGCTAGTTGACGACAT+GGG | + | chr3_3:72625042-72625061 | None:intergenic | 45.0% |
| ! | TTTGCTATGAGAAGCCATGG+CGG | - | chr3_3:72625299-72625318 | Msa0470530:intron | 45.0% |
| TGTTCGTGTATGCAGGGATA+TGG | - | chr3_3:72625867-72625886 | Msa0470530:CDS | 45.0% | |
| !! | GGAAATTTTCAGGAGACAGC+CGG | - | chr3_3:72626117-72626136 | Msa0470530:intron | 45.0% |
| ATCACATGAAACACGGGATG+AGG | - | chr3_3:72626295-72626314 | Msa0470530:intron | 45.0% | |
| ATGTAGTGATGCATACTCGG+TGG | + | chr3_3:72626446-72626465 | None:intergenic | 45.0% | |
| ACCGAGTATGCATCACTACA+TGG | - | chr3_3:72626445-72626464 | Msa0470530:intron | 45.0% | |
| ATTTAGACCAGAGGGGTGAT+TGG | + | chr3_3:72626608-72626627 | None:intergenic | 45.0% | |
| AGGTTTAGAGAAGGCTTGAC+TGG | + | chr3_3:72626664-72626683 | None:intergenic | 45.0% | |
| AGTCAAGCCTTCTCTAAACC+TGG | - | chr3_3:72626663-72626682 | Msa0470530:CDS | 45.0% | |
| !! | CTAATGGGTTGTGCATCCTT+TGG | - | chr3_3:72626881-72626900 | Msa0470530:intron | 45.0% |
| !!! | CCCACTTTGCTTTTTGGTTC+TGG | + | chr3_3:72627394-72627413 | None:intergenic | 45.0% |
| !! | AGCTCTCCCACTTTGCTTTT+TGG | + | chr3_3:72627400-72627419 | None:intergenic | 45.0% |
| CGAATACCCAAGGGCAATCT+CGG | + | chr3_3:72624512-72624531 | None:intergenic | 50.0% | |
| GTTTCTACGGCGAATACCCA+AGG | + | chr3_3:72624522-72624541 | None:intergenic | 50.0% | |
| ! | ACTGGCTAGTTGACGACATG+GGG | + | chr3_3:72625041-72625060 | None:intergenic | 50.0% |
| ! | GAACTGGCTAGTTGACGACA+TGG | + | chr3_3:72625043-72625062 | None:intergenic | 50.0% |
| TTGCTATGAGAAGCCATGGC+GGG | - | chr3_3:72625300-72625319 | Msa0470530:intron | 50.0% | |
| !! | AGGTTGGTGTTCGTGTATGC+AGG | - | chr3_3:72625860-72625879 | Msa0470530:CDS | 50.0% |
| ! | GGTTGGTGTTCGTGTATGCA+GGG | - | chr3_3:72625861-72625880 | Msa0470530:CDS | 50.0% |
| TCAAATGCCAATCACCCCTC+TGG | - | chr3_3:72626598-72626617 | Msa0470530:CDS | 50.0% | |
| ! | GGAGTCACTTGTTGCAACAG+CGG | + | chr3_3:72627373-72627392 | None:intergenic | 50.0% |
| TGCTATGAGAAGCCATGGCG+GGG | - | chr3_3:72625301-72625320 | Msa0470530:intron | 55.0% | |
| CCGACGATGCAAGTTTCCCA+CGG | + | chr3_3:72625392-72625411 | None:intergenic | 55.0% | |
| CCGTGGGAAACTTGCATCGT+CGG | - | chr3_3:72625389-72625408 | Msa0470530:intron | 55.0% | |
| GAGACAGCCGGTGCAAAATC+TGG | - | chr3_3:72626129-72626148 | Msa0470530:intron | 55.0% | |
| AGCCGGTGCAAAATCTGGCT+GGG | - | chr3_3:72626134-72626153 | Msa0470530:intron | 55.0% | |
| ! | ACCCCAGCCAGATTTTGCAC+CGG | + | chr3_3:72626139-72626158 | None:intergenic | 55.0% |
| GGAGAGAGAGGGTAAGTGCA+GGG | + | chr3_3:72626477-72626496 | None:intergenic | 55.0% | |
| AGAGCAACACAGCCGAGAAC+AGG | + | chr3_3:72627326-72627345 | None:intergenic | 55.0% | |
| ! | CTCGGCTGTGTTGCTCTATG+AGG | - | chr3_3:72627329-72627348 | Msa0470530:intron | 55.0% |
| TTGACGACATGGGGCCCGTT+TGG | + | chr3_3:72625032-72625051 | None:intergenic | 60.0% | |
| CAGCCGGTGCAAAATCTGGC+TGG | - | chr3_3:72626133-72626152 | Msa0470530:intron | 60.0% | |
| GCCGGTGCAAAATCTGGCTG+GGG | - | chr3_3:72626135-72626154 | Msa0470530:intron | 60.0% | |
| GCAAAATCTGGCTGGGGTGC+TGG | - | chr3_3:72626141-72626160 | Msa0470530:intron | 60.0% | |
| GGGAGAGAGAGGGTAAGTGC+AGG | + | chr3_3:72626478-72626497 | None:intergenic | 60.0% | |
| ! | TGAGAAGCCATGGCGGGGTC+TGG | - | chr3_3:72625306-72625325 | Msa0470530:intron | 65.0% |
| ! | GAGAAGCCATGGCGGGGTCT+GGG | - | chr3_3:72625307-72625326 | Msa0470530:intron | 65.0% |
| GGAACTCCCAGACCCCGCCA+TGG | + | chr3_3:72625316-72625335 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 72624385 | 72627632 | 72624385 | ID=Msa0470530;Name=Msa0470530 |
| chr3_3 | mRNA | 72624385 | 72627632 | 72624385 | ID=Msa0470530-mRNA-1;Parent=Msa0470530;Name=Msa0470530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=234|1|1|1|0.75|0.6|5|210|125 |
| chr3_3 | exon | 72624385 | 72624697 | 72624385 | ID=Msa0470530-mRNA-1:exon:18224;Parent=Msa0470530-mRNA-1 |
| chr3_3 | exon | 72625551 | 72625617 | 72625551 | ID=Msa0470530-mRNA-1:exon:18223;Parent=Msa0470530-mRNA-1 |
| chr3_3 | exon | 72625855 | 72625906 | 72625855 | ID=Msa0470530-mRNA-1:exon:18222;Parent=Msa0470530-mRNA-1 |
| chr3_3 | exon | 72626547 | 72626705 | 72626547 | ID=Msa0470530-mRNA-1:exon:18221;Parent=Msa0470530-mRNA-1 |
| chr3_3 | exon | 72627402 | 72627632 | 72627402 | ID=Msa0470530-mRNA-1:exon:18220;Parent=Msa0470530-mRNA-1 |
| chr3_3 | five_prime_UTR | 72627402 | 72627632 | 72627402 | ID=Msa0470530-mRNA-1:five_prime_utr;Parent=Msa0470530-mRNA-1 |
| chr3_3 | five_prime_UTR | 72626703 | 72626705 | 72626703 | ID=Msa0470530-mRNA-1:five_prime_utr;Parent=Msa0470530-mRNA-1 |
| chr3_3 | CDS | 72626547 | 72626702 | 72626547 | ID=Msa0470530-mRNA-1:cds;Parent=Msa0470530-mRNA-1 |
| chr3_3 | CDS | 72625855 | 72625906 | 72625855 | ID=Msa0470530-mRNA-1:cds;Parent=Msa0470530-mRNA-1 |
| chr3_3 | CDS | 72625551 | 72625617 | 72625551 | ID=Msa0470530-mRNA-1:cds;Parent=Msa0470530-mRNA-1 |
| chr3_3 | CDS | 72624595 | 72624697 | 72624595 | ID=Msa0470530-mRNA-1:cds;Parent=Msa0470530-mRNA-1 |
| chr3_3 | three_prime_UTR | 72624385 | 72624594 | 72624385 | ID=Msa0470530-mRNA-1:three_prime_utr;Parent=Msa0470530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
