Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455950 | XP_003629390.1 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 1.04e-113 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455950 | sp|P17093|RS11_SOYBN | 95.000 | 160 | 7 | 1 | 1 | 160 | 1 | 159 | 4.28e-99 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455950 | B7FGL2 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 4.97e-114 | 329 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038980 | Msa1455950 | 0.815579 | 8.601595e-52 | -8.615850e-47 |
| Msa0045730 | Msa1455950 | 0.819860 | 9.302608e-53 | -8.615850e-47 |
| Msa0116130 | Msa1455950 | 0.847085 | 1.445726e-59 | -8.615850e-47 |
| Msa1349570 | Msa1455950 | 0.842641 | 2.284793e-58 | -8.615850e-47 |
| Msa1356790 | Msa1455950 | 0.846294 | 2.377070e-59 | -8.615850e-47 |
| Msa1362790 | Msa1455950 | 0.864224 | 1.418231e-64 | -8.615850e-47 |
| Msa1368920 | Msa1455950 | 0.811412 | 7.093629e-51 | -8.615850e-47 |
| Msa1369190 | Msa1455950 | 0.839421 | 1.600954e-57 | -8.615850e-47 |
| Msa1374240 | Msa1455950 | 0.817446 | 3.284357e-52 | -8.615850e-47 |
| Msa1406080 | Msa1455950 | 0.868303 | 7.216470e-66 | -8.615850e-47 |
| Msa1426490 | Msa1455950 | 0.812511 | 4.087493e-51 | -8.615850e-47 |
| Msa1427560 | Msa1455950 | 0.847544 | 1.081202e-59 | -8.615850e-47 |
| Msa1455950 | Msa1462860 | 0.820565 | 6.412326e-53 | -8.615850e-47 |
| Msa0604960 | Msa1455950 | 0.840239 | 9.802661e-58 | -8.615850e-47 |
| Msa0623200 | Msa1455950 | 0.837594 | 4.740834e-57 | -8.615850e-47 |
| Msa0683660 | Msa1455950 | 0.814437 | 1.541165e-51 | -8.615850e-47 |
| Msa0706500 | Msa1455950 | 0.834379 | 3.102053e-56 | -8.615850e-47 |
| Msa0712610 | Msa1455950 | 0.857139 | 2.000700e-62 | -8.615850e-47 |
| Msa0729200 | Msa1455950 | 0.814851 | 1.247933e-51 | -8.615850e-47 |
| Msa0752910 | Msa1455950 | 0.862655 | 4.344675e-64 | -8.615850e-47 |
| Msa0769590 | Msa1455950 | 0.810041 | 1.403534e-50 | -8.615850e-47 |
| Msa0781080 | Msa1455950 | 0.836614 | 8.439860e-57 | -8.615850e-47 |
| Msa0806880 | Msa1455950 | 0.800953 | 1.131432e-48 | -8.615850e-47 |
| Msa0827380 | Msa1455950 | 0.850721 | 1.414235e-60 | -8.615850e-47 |
| Msa0133540 | Msa1455950 | 0.805910 | 1.062357e-49 | -8.615850e-47 |
| Msa0181490 | Msa1455950 | 0.813292 | 2.755699e-51 | -8.615850e-47 |
| Msa0219120 | Msa1455950 | 0.830825 | 2.361101e-55 | -8.615850e-47 |
| Msa0224560 | Msa1455950 | 0.804579 | 2.019239e-49 | -8.615850e-47 |
| Msa1316680 | Msa1455950 | 0.824576 | 7.488885e-54 | -8.615850e-47 |
| Msa0481850 | Msa1455950 | 0.842454 | 2.560430e-58 | -8.615850e-47 |
| Msa1023160 | Msa1455950 | 0.831990 | 1.219965e-55 | -8.615850e-47 |
| Msa1037290 | Msa1455950 | 0.813688 | 2.255679e-51 | -8.615850e-47 |
| Msa1048690 | Msa1455950 | 0.810893 | 9.191265e-51 | -8.615850e-47 |
| Msa1080350 | Msa1455950 | 0.828523 | 8.576649e-55 | -8.615850e-47 |
| Msa0258850 | Msa1455950 | 0.820532 | 6.526468e-53 | -8.615850e-47 |
| Msa0298200 | Msa1455950 | 0.826646 | 2.419891e-54 | -8.615850e-47 |
| Msa0306690 | Msa1455950 | 0.822848 | 1.901565e-53 | -8.615850e-47 |
| Msa0337670 | Msa1455950 | 0.805914 | 1.060739e-49 | -8.615850e-47 |
| Msa0348830 | Msa1455950 | 0.854163 | 1.478228e-61 | -8.615850e-47 |
| Msa1125860 | Msa1455950 | 0.824943 | 6.138088e-54 | -8.615850e-47 |
| Msa1126060 | Msa1455950 | 0.822756 | 1.997650e-53 | -8.615850e-47 |
| Msa1126520 | Msa1455950 | 0.840906 | 6.555611e-58 | -8.615850e-47 |
| Msa1143510 | Msa1455950 | 0.800688 | 1.281600e-48 | -8.615850e-47 |
| Msa1166870 | Msa1455950 | 0.803058 | 4.178024e-49 | -8.615850e-47 |
| Msa1186980 | Msa1455950 | 0.804366 | 2.236466e-49 | -8.615850e-47 |
| Msa0534750 | Msa1455950 | 0.805166 | 1.521996e-49 | -8.615850e-47 |
| Msa0596370 | Msa1455950 | 0.856317 | 3.491191e-62 | -8.615850e-47 |
| Msa0945480 | Msa1455950 | 0.843484 | 1.362299e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455950 | MtrunA17_Chr8g0372611 | 100.000 | 160 | 0 | 0 | 1 | 160 | 1 | 160 | 9.58e-118 | 329 |
| Msa1455950 | MtrunA17_Chr4g0065131 | 97.500 | 160 | 4 | 0 | 1 | 160 | 1 | 160 | 5.33e-115 | 322 |
| Msa1455950 | MtrunA17_Chr1g0152301 | 93.168 | 161 | 10 | 1 | 1 | 160 | 1 | 161 | 1.93e-99 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455950 | AT3G48930.1 | 91.250 | 160 | 14 | 0 | 1 | 160 | 1 | 160 | 6.92e-98 | 279 |
| Msa1455950 | AT5G23740.1 | 90.000 | 160 | 15 | 1 | 1 | 160 | 1 | 159 | 5.20e-96 | 274 |
| Msa1455950 | AT4G30800.1 | 90.625 | 160 | 14 | 1 | 1 | 160 | 1 | 159 | 4.37e-94 | 270 |
Find 61 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGAAGTTCTGATCAATTT+TGG | 0.204991 | tig0036760:-6634 | Msa1455950:three_prime_UTR |
| GAAAAGGTGGAAATCGTTTC+TGG | 0.234016 | tig0036760:-8310 | Msa1455950:CDS |
| ATTACCTTCAGTGGCTTCTC+TGG | 0.315196 | tig0036760:+8259 | Msa1455950:intergenic |
| CTCACCTTGCTTCCGTGTTA+AGG | 0.347416 | tig0036760:-6975 | Msa1455950:CDS |
| AGCAACCCAAAGTGTTTCTA+TGG | 0.356385 | tig0036760:-8457 | Msa1455950:intron |
| TTGAAGTTATGTACTATGAT+TGG | 0.362059 | tig0036760:-6604 | Msa1455950:three_prime_UTR |
| TTCTGGAAATCAGTTGGTCT+TGG | 0.364644 | tig0036760:-8293 | Msa1455950:CDS |
| TGTTGCAGTTCGAAGAAATC+TGG | 0.406931 | tig0036760:-8350 | Msa1455950:intron |
| TTACCTTCAGTGGCTTCTCT+GGG | 0.418959 | tig0036760:+8260 | Msa1455950:intergenic |
| TACATACCATAGAAACACTT+TGG | 0.429678 | tig0036760:+8451 | Msa1455950:intergenic |
| ACCCCGGATGGAAACATTGC+CGG | 0.435918 | tig0036760:+7224 | Msa1455950:intergenic |
| GAAGGAGATCATGTTATTAT+CGG | 0.436388 | tig0036760:-6953 | Msa1455950:CDS |
| CTTGGGACACAATGTTATGA+TGG | 0.439614 | tig0036760:-6555 | Msa1455950:three_prime_UTR |
| ATGGAAACATTGCCGGTGAA+TGG | 0.446336 | tig0036760:+7231 | Msa1455950:intergenic |
| TCACCGGCAATGTTTCCATC+CGG | 0.450663 | tig0036760:-7227 | Msa1455950:CDS |
| CACCGGCAATGTTTCCATCC+GGG | 0.463421 | tig0036760:-7226 | Msa1455950:CDS |
| CACATTGAACCTCACAGTCT+TGG | 0.470441 | tig0036760:+6787 | Msa1455950:intergenic |
| ATCCGGGGTCGTATCTTAGC+TGG | 0.478220 | tig0036760:-7210 | Msa1455950:CDS |
| TGGACACTTCTTGTCAATGT+AGG | 0.485606 | tig0036760:+7251 | Msa1455950:intergenic |
| ACATACCATAGAAACACTTT+GGG | 0.486474 | tig0036760:+8452 | Msa1455950:intergenic |
| TGAATAGAACTATTATTGTC+AGG | 0.489336 | tig0036760:-7167 | Msa1455950:CDS |
| CAGTTCGAAGAAATCTGGTA+AGG | 0.491165 | tig0036760:-8345 | Msa1455950:CDS |
| TCTGAGTGAGCGAGAGAAGA+AGG | 0.501010 | tig0036760:-8650 | Msa1455950:five_prime_UTR |
| GCTGGATCATCTAGTGGTGC+AGG | 0.501738 | tig0036760:-6749 | Msa1455950:CDS |
| AAGTAATTCTGATTTCTGTA+TGG | 0.502142 | tig0036760:-6655 | Msa1455950:three_prime_UTR |
| ATCTAGTGGTGCAGGAAAGA+AGG | 0.504250 | tig0036760:-6741 | Msa1455950:CDS |
| AAATTAAACATTACCTTCAG+TGG | 0.506426 | tig0036760:+8250 | Msa1455950:intergenic |
| TCTGGTAAGGGGAAGAGGCC+AGG | 0.508129 | tig0036760:-8332 | Msa1455950:CDS |
| AGAAATCTGGTAAGGGGAAG+AGG | 0.511084 | tig0036760:-8337 | Msa1455950:CDS |
| AAGGGGAAGAGGCCAGGAAA+AGG | 0.518491 | tig0036760:-8326 | Msa1455950:CDS |
| ACCTTCAGTGGCTTCTCTGG+GGG | 0.522306 | tig0036760:+8262 | Msa1455950:intergenic |
| ACCGGCAATGTTTCCATCCG+GGG | 0.533333 | tig0036760:-7225 | Msa1455950:CDS |
| GACAAGAAGTGTCCATTCAC+CGG | 0.534170 | tig0036760:-7243 | Msa1455950:CDS |
| AGCTAAGATACGACCCCGGA+TGG | 0.536678 | tig0036760:+7212 | Msa1455950:intergenic |
| GCACCACTAGATGATCCAGC+TGG | 0.537223 | tig0036760:+6752 | Msa1455950:intergenic |
| TTCTTTGTTACAGACTGAGA+AGG | 0.537706 | tig0036760:-8489 | Msa1455950:intron |
| CCTTGCTTCCGTGTTAAGGA+AGG | 0.545045 | tig0036760:-6971 | Msa1455950:CDS |
| TACCTTCAGTGGCTTCTCTG+GGG | 0.550510 | tig0036760:+8261 | Msa1455950:intergenic |
| GGGAAGAGGCCAGGAAAAGG+TGG | 0.558384 | tig0036760:-8323 | Msa1455950:CDS |
| AATCGTTTCTGGAAATCAGT+TGG | 0.558681 | tig0036760:-8299 | Msa1455950:CDS |
| AAGCAAGGTGAGACATGAGC+TGG | 0.562393 | tig0036760:+6986 | Msa1455950:intergenic |
| CCATGGTGGTAGAGTTGCAG+AGG | 0.569205 | tig0036760:+8598 | Msa1455950:intergenic |
| GGAAGTTACTTGTTCAGCCA+TGG | 0.570737 | tig0036760:+8581 | Msa1455950:intergenic |
| ATGTTATTATCGGACAATGC+AGG | 0.580248 | tig0036760:-6943 | Msa1455950:intron |
| AGTTCGAAGAAATCTGGTAA+GGG | 0.591421 | tig0036760:-8344 | Msa1455950:CDS |
| GTGTTGAAAGTGATCCCAGC+TGG | 0.594686 | tig0036760:-6767 | Msa1455950:CDS |
| AACCTCACAGTCTTGGAGAG+TGG | 0.603168 | tig0036760:+6794 | Msa1455950:intergenic |
| AGTGAGCGAGAGAAGAAGGT+AGG | 0.608997 | tig0036760:-8646 | Msa1455950:five_prime_UTR |
| CCTTCCTTAACACGGAAGCA+AGG | 0.616216 | tig0036760:+6971 | Msa1455950:intergenic |
| CTCTATTTAGGTATGAGAAG+AGG | 0.617524 | tig0036760:-7021 | Msa1455950:intron |
| ACTTTATTAAGAAGTATCAG+AGG | 0.622717 | tig0036760:-7131 | Msa1455950:intron |
| CACCACTAGATGATCCAGCT+GGG | 0.624692 | tig0036760:+6753 | Msa1455950:intergenic |
| CATGATCTCCTTCCTTAACA+CGG | 0.626861 | tig0036760:+6963 | Msa1455950:intergenic |
| GTTCGAAGAAATCTGGTAAG+GGG | 0.639946 | tig0036760:-8343 | Msa1455950:CDS |
| ATCCCAGCTGGATCATCTAG+TGG | 0.646748 | tig0036760:-6755 | Msa1455950:CDS |
| AGGTAGGTTTCAAGTTCGTG+CGG | 0.650287 | tig0036760:-8630 | Msa1455950:five_prime_UTR |
| AGTTACTTGTTCAGCCATGG+TGG | 0.659627 | tig0036760:+8584 | Msa1455950:intergenic |
| GGCCACTCTCCAAGACTGTG+AGG | 0.661246 | tig0036760:-6796 | Msa1455950:CDS |
| CCTCTGCAACTCTACCACCA+TGG | 0.669441 | tig0036760:-8598 | Msa1455950:exon |
| ATAGAACTATTATTGTCAGG+AGG | 0.690212 | tig0036760:-7164 | Msa1455950:CDS |
| TTCCAGCTAAGATACGACCC+CGG | 0.719534 | tig0036760:+7208 | Msa1455940:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAACAGAAATT+GGG | + | tig0036760:6721-6740 | Msa1455950:intergenic | 10.0% |
| !! | AATAAAAAAAAAACAGAAAT+TGG | + | tig0036760:6722-6741 | Msa1455950:intergenic | 10.0% |
| !! | ATAAAAAAAAAACAGAAATT+GGG | + | tig0036760:6721-6740 | Msa1455950:intergenic | 10.0% |
| !! | AATAAAAAAAAAACAGAAAT+TGG | + | tig0036760:6722-6741 | Msa1455950:intergenic | 10.0% |
| !!! | ATCTCTGTTTTTTTTTTTTT+TGG | - | tig0036760:6598-6617 | Msa1455950:three_prime_UTR | 15.0% |
| !!! | AAAGACTACATTTTTTTTTT+AGG | + | tig0036760:7085-7104 | Msa1455950:intergenic | 15.0% |
| !! | TAAAAAAAAAATGTAGTCTT+TGG | - | tig0036760:7084-7103 | Msa1455950:intron | 15.0% |
| !! | TGTTTGTAAATAAATAATAG+TGG | - | tig0036760:7417-7436 | Msa1455950:intron | 15.0% |
| !!! | GTTTCAATTATTTTGAATTT+TGG | - | tig0036760:8616-8635 | Msa1455950:five_prime_UTR | 15.0% |
| !!! | ATCTCTGTTTTTTTTTTTTT+TGG | - | tig0036760:6598-6617 | Msa1455950:three_prime_UTR | 15.0% |
| !!! | AAAGACTACATTTTTTTTTT+AGG | + | tig0036760:7085-7104 | Msa1455950:intergenic | 15.0% |
| !! | TAAAAAAAAAATGTAGTCTT+TGG | - | tig0036760:7084-7103 | Msa1455950:intron | 15.0% |
| !! | TGTTTGTAAATAAATAATAG+TGG | - | tig0036760:7417-7436 | Msa1455950:intron | 15.0% |
| !!! | GTTTCAATTATTTTGAATTT+TGG | - | tig0036760:8616-8635 | Msa1455950:five_prime_UTR | 15.0% |
| !!! | TGAAGGTAATGTTTAATTTT+AGG | - | tig0036760:6889-6908 | Msa1455950:intron | 20.0% |
| !!! | GAAGGTAATGTTTAATTTTA+GGG | - | tig0036760:6890-6909 | Msa1455950:intron | 20.0% |
| !!! | TATGTTCTAAACTTACATAT+AGG | - | tig0036760:6925-6944 | Msa1455950:intron | 20.0% |
| !! | TAAAGCAAAATTGAGTTAAA+TGG | - | tig0036760:7138-7157 | Msa1455950:CDS | 20.0% |
| !!! | ATTTATGTATGTTTTGATAC+TGG | - | tig0036760:7260-7279 | Msa1455950:intron | 20.0% |
| !! | TGTCTGTTTATATGATAAAT+TGG | - | tig0036760:7383-7402 | Msa1455950:intron | 20.0% |
| !! | TATTTATTTACAAACACAAC+AGG | + | tig0036760:7413-7432 | Msa1455950:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTGAATGGC+AGG | - | tig0036760:7500-7519 | Msa1455950:intron | 20.0% |
| !!! | TTCGTTATTATGTTTTTTCT+TGG | - | tig0036760:8562-8581 | Msa1455950:intron | 20.0% |
| !!! | TCGTTATTATGTTTTTTCTT+GGG | - | tig0036760:8563-8582 | Msa1455950:intron | 20.0% |
| !!! | TGAAGGTAATGTTTAATTTT+AGG | - | tig0036760:6889-6908 | Msa1455950:intron | 20.0% |
| !!! | GAAGGTAATGTTTAATTTTA+GGG | - | tig0036760:6890-6909 | Msa1455950:intron | 20.0% |
| !!! | TATGTTCTAAACTTACATAT+AGG | - | tig0036760:6925-6944 | Msa1455950:intron | 20.0% |
| !! | TAAAGCAAAATTGAGTTAAA+TGG | - | tig0036760:7138-7157 | Msa1455950:CDS | 20.0% |
| !!! | ATTTATGTATGTTTTGATAC+TGG | - | tig0036760:7260-7279 | Msa1455950:intron | 20.0% |
| !! | TGTCTGTTTATATGATAAAT+TGG | - | tig0036760:7383-7402 | Msa1455950:intron | 20.0% |
| !! | TATTTATTTACAAACACAAC+AGG | + | tig0036760:7413-7432 | Msa1455950:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTGAATGGC+AGG | - | tig0036760:7500-7519 | Msa1455950:intron | 20.0% |
| !!! | TTCGTTATTATGTTTTTTCT+TGG | - | tig0036760:8562-8581 | Msa1455950:intron | 20.0% |
| !!! | TCGTTATTATGTTTTTTCTT+GGG | - | tig0036760:8563-8582 | Msa1455950:intron | 20.0% |
| ! | AAATTAAACATTACCTTCAG+TGG | + | tig0036760:6888-6907 | Msa1455950:intergenic | 25.0% |
| ! | AAACTTACATATAGGAATGT+AGG | - | tig0036760:6933-6952 | Msa1455950:intron | 25.0% |
| ! | AACTTACATATAGGAATGTA+GGG | - | tig0036760:6934-6953 | Msa1455950:intron | 25.0% |
| ! | AACTAAAACAAATACACTCA+AGG | + | tig0036760:6977-6996 | Msa1455950:intergenic | 25.0% |
| !!! | ATTTTAGTCCTCAAATGTAT+TGG | - | tig0036760:7001-7020 | Msa1455950:CDS | 25.0% |
| ! | TTAGATAAGGATAGAAACAT+TGG | - | tig0036760:7178-7197 | Msa1455950:CDS | 25.0% |
| !! | GCAATACTTATTCTAGTTAT+TGG | - | tig0036760:7461-7480 | Msa1455950:intron | 25.0% |
| !! | GTATTGAGACATGTAATTTT+TGG | - | tig0036760:7585-7604 | Msa1455950:intron | 25.0% |
| !!! | AGACATGTAATTTTTGGTTA+TGG | - | tig0036760:7591-7610 | Msa1455950:intron | 25.0% |
| ! | GTTATGGTTATGTTATGTTA+CGG | - | tig0036760:7607-7626 | Msa1455950:intron | 25.0% |
| ! | AATTTCACTTTCAAAGTAAC+TGG | + | tig0036760:7753-7772 | Msa1455950:intergenic | 25.0% |
| !! | ATTGTTAATAGCTCTATGTA+TGG | - | tig0036760:7794-7813 | Msa1455950:intron | 25.0% |
| !!! | TTCTGTTTCTAATACAGAAA+TGG | - | tig0036760:7832-7851 | Msa1455950:intron | 25.0% |
| !!! | TTCTATTCATTTTAGCACTA+TGG | + | tig0036760:7957-7976 | Msa1455950:intergenic | 25.0% |
| ! | TGAATAGAACTATTATTGTC+AGG | - | tig0036760:7968-7987 | Msa1455950:intron | 25.0% |
| !!! | ACTTTATTAAGAAGTATCAG+AGG | - | tig0036760:8004-8023 | Msa1455950:intron | 25.0% |
| ! | AAGTGTGCAAATAAAAAATG+GGG | + | tig0036760:8055-8074 | Msa1455950:intergenic | 25.0% |
| ! | CAAGTGTGCAAATAAAAAAT+GGG | + | tig0036760:8056-8075 | Msa1455950:intergenic | 25.0% |
| ! | GAGGAGTAACAAAAAAAAAA+GGG | + | tig0036760:8097-8116 | Msa1455950:intergenic | 25.0% |
| ! | AGAGGAGTAACAAAAAAAAA+AGG | + | tig0036760:8098-8117 | Msa1455950:intergenic | 25.0% |
| !! | TTTTTGTTACTCCTCTATTT+AGG | - | tig0036760:8102-8121 | Msa1455950:intron | 25.0% |
| !! | TCCTTTCTTTTTCTTTTTGT+AGG | - | tig0036760:8233-8252 | Msa1455950:intron | 25.0% |
| ! | TCCTACAAAAAGAAAAAGAA+AGG | + | tig0036760:8237-8256 | Msa1455950:intergenic | 25.0% |
| ! | TAAAGAAGTGGCAAAAATAA+AGG | + | tig0036760:8319-8338 | Msa1455950:intergenic | 25.0% |
| !!! | TTTATTTTTGCCACTTCTTT+AGG | - | tig0036760:8318-8337 | Msa1455950:CDS | 25.0% |
| ! | AAGTAATTCTGATTTCTGTA+TGG | - | tig0036760:8480-8499 | Msa1455950:intron | 25.0% |
| ! | TTGAAGTTATGTACTATGAT+TGG | - | tig0036760:8531-8550 | Msa1455950:intron | 25.0% |
| ! | AAATTAAACATTACCTTCAG+TGG | + | tig0036760:6888-6907 | Msa1455950:intergenic | 25.0% |
| ! | AAACTTACATATAGGAATGT+AGG | - | tig0036760:6933-6952 | Msa1455950:intron | 25.0% |
| ! | AACTTACATATAGGAATGTA+GGG | - | tig0036760:6934-6953 | Msa1455950:intron | 25.0% |
| ! | AACTAAAACAAATACACTCA+AGG | + | tig0036760:6977-6996 | Msa1455950:intergenic | 25.0% |
| !!! | ATTTTAGTCCTCAAATGTAT+TGG | - | tig0036760:7001-7020 | Msa1455950:CDS | 25.0% |
| ! | TTAGATAAGGATAGAAACAT+TGG | - | tig0036760:7178-7197 | Msa1455950:CDS | 25.0% |
| !! | GCAATACTTATTCTAGTTAT+TGG | - | tig0036760:7461-7480 | Msa1455950:intron | 25.0% |
| !! | GTATTGAGACATGTAATTTT+TGG | - | tig0036760:7585-7604 | Msa1455950:intron | 25.0% |
| !!! | AGACATGTAATTTTTGGTTA+TGG | - | tig0036760:7591-7610 | Msa1455950:intron | 25.0% |
| ! | GTTATGGTTATGTTATGTTA+CGG | - | tig0036760:7607-7626 | Msa1455950:intron | 25.0% |
| ! | AATTTCACTTTCAAAGTAAC+TGG | + | tig0036760:7753-7772 | Msa1455950:intergenic | 25.0% |
| !! | ATTGTTAATAGCTCTATGTA+TGG | - | tig0036760:7794-7813 | Msa1455950:intron | 25.0% |
| !!! | TTCTGTTTCTAATACAGAAA+TGG | - | tig0036760:7832-7851 | Msa1455950:intron | 25.0% |
| !!! | TTCTATTCATTTTAGCACTA+TGG | + | tig0036760:7957-7976 | Msa1455950:intergenic | 25.0% |
| ! | TGAATAGAACTATTATTGTC+AGG | - | tig0036760:7968-7987 | Msa1455950:intron | 25.0% |
| !!! | ACTTTATTAAGAAGTATCAG+AGG | - | tig0036760:8004-8023 | Msa1455950:intron | 25.0% |
| ! | AAGTGTGCAAATAAAAAATG+GGG | + | tig0036760:8055-8074 | Msa1455950:intergenic | 25.0% |
| ! | CAAGTGTGCAAATAAAAAAT+GGG | + | tig0036760:8056-8075 | Msa1455950:intergenic | 25.0% |
| ! | GAGGAGTAACAAAAAAAAAA+GGG | + | tig0036760:8097-8116 | Msa1455950:intergenic | 25.0% |
| ! | AGAGGAGTAACAAAAAAAAA+AGG | + | tig0036760:8098-8117 | Msa1455950:intergenic | 25.0% |
| !! | TTTTTGTTACTCCTCTATTT+AGG | - | tig0036760:8102-8121 | Msa1455950:intron | 25.0% |
| !! | TCCTTTCTTTTTCTTTTTGT+AGG | - | tig0036760:8233-8252 | Msa1455950:intron | 25.0% |
| ! | TCCTACAAAAAGAAAAAGAA+AGG | + | tig0036760:8237-8256 | Msa1455950:intergenic | 25.0% |
| ! | TAAAGAAGTGGCAAAAATAA+AGG | + | tig0036760:8319-8338 | Msa1455950:intergenic | 25.0% |
| !!! | TTTATTTTTGCCACTTCTTT+AGG | - | tig0036760:8318-8337 | Msa1455950:CDS | 25.0% |
| ! | AAGTAATTCTGATTTCTGTA+TGG | - | tig0036760:8480-8499 | Msa1455950:intron | 25.0% |
| ! | TTGAAGTTATGTACTATGAT+TGG | - | tig0036760:8531-8550 | Msa1455950:intron | 25.0% |
| AAAAAACAGAGATAGAACGA+AGG | + | tig0036760:6591-6610 | Msa1455950:intergenic | 30.0% | |
| ACATACCATAGAAACACTTT+GGG | + | tig0036760:6686-6705 | Msa1455950:intergenic | 30.0% | |
| TACATACCATAGAAACACTT+TGG | + | tig0036760:6687-6706 | Msa1455950:intergenic | 30.0% | |
| TCCTCAAATGTATTGGATTT+GGG | - | tig0036760:7008-7027 | Msa1455950:CDS | 30.0% | |
| ATGCAAAGCACAATTAGATA+AGG | - | tig0036760:7165-7184 | Msa1455950:CDS | 30.0% | |
| TATAGACCAATTCTTTCAAG+CGG | + | tig0036760:7636-7655 | Msa1455950:intergenic | 30.0% | |
| ACACTTGCAAGACATAATAT+AGG | + | tig0036760:7680-7699 | Msa1455950:intergenic | 30.0% | |
| ATAGAACTATTATTGTCAGG+AGG | - | tig0036760:7971-7990 | Msa1455950:intron | 30.0% | |
| !! | TTAAGAAGTATCAGAGGTAT+TGG | - | tig0036760:8010-8029 | Msa1455950:intron | 30.0% |
| ! | ATTGGTTTCCTTTCATACTA+TGG | - | tig0036760:8028-8047 | Msa1455950:intron | 30.0% |
| CCAAGTGTGCAAATAAAAAA+TGG | + | tig0036760:8057-8076 | Msa1455950:intergenic | 30.0% | |
| !!! | CCATTTTTTATTTGCACACT+TGG | - | tig0036760:8054-8073 | Msa1455950:intron | 30.0% |
| GAAGGAGATCATGTTATTAT+CGG | - | tig0036760:8182-8201 | Msa1455950:intron | 30.0% | |
| !! | TTTGAATTTTGGCATCTGAA+AGG | - | tig0036760:8627-8646 | Msa1455950:five_prime_UTR | 30.0% |
| AAAAAACAGAGATAGAACGA+AGG | + | tig0036760:6591-6610 | Msa1455950:intergenic | 30.0% | |
| ACATACCATAGAAACACTTT+GGG | + | tig0036760:6686-6705 | Msa1455950:intergenic | 30.0% | |
| TACATACCATAGAAACACTT+TGG | + | tig0036760:6687-6706 | Msa1455950:intergenic | 30.0% | |
| TCCTCAAATGTATTGGATTT+GGG | - | tig0036760:7008-7027 | Msa1455950:CDS | 30.0% | |
| ATGCAAAGCACAATTAGATA+AGG | - | tig0036760:7165-7184 | Msa1455950:CDS | 30.0% | |
| TATAGACCAATTCTTTCAAG+CGG | + | tig0036760:7636-7655 | Msa1455950:intergenic | 30.0% | |
| ACACTTGCAAGACATAATAT+AGG | + | tig0036760:7680-7699 | Msa1455950:intergenic | 30.0% | |
| ATAGAACTATTATTGTCAGG+AGG | - | tig0036760:7971-7990 | Msa1455950:intron | 30.0% | |
| !! | TTAAGAAGTATCAGAGGTAT+TGG | - | tig0036760:8010-8029 | Msa1455950:intron | 30.0% |
| ! | ATTGGTTTCCTTTCATACTA+TGG | - | tig0036760:8028-8047 | Msa1455950:intron | 30.0% |
| CCAAGTGTGCAAATAAAAAA+TGG | + | tig0036760:8057-8076 | Msa1455950:intergenic | 30.0% | |
| !!! | CCATTTTTTATTTGCACACT+TGG | - | tig0036760:8054-8073 | Msa1455950:intron | 30.0% |
| GAAGGAGATCATGTTATTAT+CGG | - | tig0036760:8182-8201 | Msa1455950:intron | 30.0% | |
| !! | TTTGAATTTTGGCATCTGAA+AGG | - | tig0036760:8627-8646 | Msa1455950:five_prime_UTR | 30.0% |
| TTCTTTGTTACAGACTGAGA+AGG | - | tig0036760:6646-6665 | Msa1455950:three_prime_UTR | 35.0% | |
| AGTTCGAAGAAATCTGGTAA+GGG | - | tig0036760:6791-6810 | Msa1455950:CDS | 35.0% | |
| ! | AATCGTTTCTGGAAATCAGT+TGG | - | tig0036760:6836-6855 | Msa1455950:intron | 35.0% |
| ! | TGTAGGGATAAACAGCATTT+TGG | - | tig0036760:6950-6969 | Msa1455950:CDS | 35.0% |
| GTCCTCAAATGTATTGGATT+TGG | - | tig0036760:7007-7026 | Msa1455950:CDS | 35.0% | |
| CCTCAAATGTATTGGATTTG+GGG | - | tig0036760:7009-7028 | Msa1455950:CDS | 35.0% | |
| !!! | ACGCTATTTCTTTTGCATAG+TGG | - | tig0036760:7217-7236 | Msa1455950:CDS | 35.0% |
| ! | TTATGTCTTGCAAGTGTTGT+TGG | - | tig0036760:7683-7702 | Msa1455950:intron | 35.0% |
| ! | TATGTCTTGCAAGTGTTGTT+GGG | - | tig0036760:7684-7703 | Msa1455950:intron | 35.0% |
| ! | AATAGCTCTATGTATGGCTA+CGG | - | tig0036760:7800-7819 | Msa1455950:intron | 35.0% |
| CTCTTCTCATACCTAAATAG+AGG | + | tig0036760:8116-8135 | Msa1455950:intergenic | 35.0% | |
| CTCTATTTAGGTATGAGAAG+AGG | - | tig0036760:8114-8133 | Msa1455950:intron | 35.0% | |
| ATGTTATTATCGGACAATGC+AGG | - | tig0036760:8192-8211 | Msa1455950:intron | 35.0% | |
| !! | GGTGAAGTTCTGATCAATTT+TGG | - | tig0036760:8501-8520 | Msa1455950:intron | 35.0% |
| TTCTTTGTTACAGACTGAGA+AGG | - | tig0036760:6646-6665 | Msa1455950:three_prime_UTR | 35.0% | |
| AGTTCGAAGAAATCTGGTAA+GGG | - | tig0036760:6791-6810 | Msa1455950:CDS | 35.0% | |
| ! | AATCGTTTCTGGAAATCAGT+TGG | - | tig0036760:6836-6855 | Msa1455950:intron | 35.0% |
| ! | TGTAGGGATAAACAGCATTT+TGG | - | tig0036760:6950-6969 | Msa1455950:CDS | 35.0% |
| GTCCTCAAATGTATTGGATT+TGG | - | tig0036760:7007-7026 | Msa1455950:CDS | 35.0% | |
| CCTCAAATGTATTGGATTTG+GGG | - | tig0036760:7009-7028 | Msa1455950:CDS | 35.0% | |
| !!! | ACGCTATTTCTTTTGCATAG+TGG | - | tig0036760:7217-7236 | Msa1455950:CDS | 35.0% |
| ! | TTATGTCTTGCAAGTGTTGT+TGG | - | tig0036760:7683-7702 | Msa1455950:intron | 35.0% |
| ! | TATGTCTTGCAAGTGTTGTT+GGG | - | tig0036760:7684-7703 | Msa1455950:intron | 35.0% |
| ! | AATAGCTCTATGTATGGCTA+CGG | - | tig0036760:7800-7819 | Msa1455950:intron | 35.0% |
| CTCTTCTCATACCTAAATAG+AGG | + | tig0036760:8116-8135 | Msa1455950:intergenic | 35.0% | |
| CTCTATTTAGGTATGAGAAG+AGG | - | tig0036760:8114-8133 | Msa1455950:intron | 35.0% | |
| ATGTTATTATCGGACAATGC+AGG | - | tig0036760:8192-8211 | Msa1455950:intron | 35.0% | |
| !! | GGTGAAGTTCTGATCAATTT+TGG | - | tig0036760:8501-8520 | Msa1455950:intron | 35.0% |
| ! | AGCAACCCAAAGTGTTTCTA+TGG | - | tig0036760:6678-6697 | Msa1455950:three_prime_UTR | 40.0% |
| TGTTGCAGTTCGAAGAAATC+TGG | - | tig0036760:6785-6804 | Msa1455950:CDS | 40.0% | |
| CAGTTCGAAGAAATCTGGTA+AGG | - | tig0036760:6790-6809 | Msa1455950:CDS | 40.0% | |
| GTTCGAAGAAATCTGGTAAG+GGG | - | tig0036760:6792-6811 | Msa1455950:CDS | 40.0% | |
| ! | AAACGATTTCCACCTTTTCC+TGG | + | tig0036760:6824-6843 | Msa1455950:intergenic | 40.0% |
| GAAAAGGTGGAAATCGTTTC+TGG | - | tig0036760:6825-6844 | Msa1455950:intron | 40.0% | |
| ! | TTCTGGAAATCAGTTGGTCT+TGG | - | tig0036760:6842-6861 | Msa1455950:intron | 40.0% |
| CCCCAAATCCAATACATTTG+AGG | + | tig0036760:7012-7031 | Msa1455950:intergenic | 40.0% | |
| TAATAGAGCCTCACATTCGA+GGG | - | tig0036760:7043-7062 | Msa1455950:intron | 40.0% | |
| ! | TGTTTGTCTGAGATTCCTCT+TGG | - | tig0036760:7308-7327 | Msa1455950:intron | 40.0% |
| AGATTCCTCTTGGCAATATC+AGG | - | tig0036760:7318-7337 | Msa1455950:intron | 40.0% | |
| TGGACACTTCTTGTCAATGT+AGG | + | tig0036760:7887-7906 | Msa1455950:intergenic | 40.0% | |
| AATGGGGACCATAGTATGAA+AGG | + | tig0036760:8039-8058 | Msa1455950:intergenic | 40.0% | |
| CATGATCTCCTTCCTTAACA+CGG | + | tig0036760:8175-8194 | Msa1455950:intergenic | 40.0% | |
| TTATTATCGGACAATGCAGG+TGG | - | tig0036760:8195-8214 | Msa1455950:intron | 40.0% | |
| TATTATCGGACAATGCAGGT+GGG | - | tig0036760:8196-8215 | Msa1455950:intron | 40.0% | |
| CTTGGGACACAATGTTATGA+TGG | - | tig0036760:8580-8599 | Msa1455950:intron | 40.0% | |
| ! | GAATTTTCTCACGTATAGCG+AGG | - | tig0036760:8649-8668 | Msa1455950:five_prime_UTR | 40.0% |
| ! | AGCAACCCAAAGTGTTTCTA+TGG | - | tig0036760:6678-6697 | Msa1455950:three_prime_UTR | 40.0% |
| TGTTGCAGTTCGAAGAAATC+TGG | - | tig0036760:6785-6804 | Msa1455950:CDS | 40.0% | |
| CAGTTCGAAGAAATCTGGTA+AGG | - | tig0036760:6790-6809 | Msa1455950:CDS | 40.0% | |
| GTTCGAAGAAATCTGGTAAG+GGG | - | tig0036760:6792-6811 | Msa1455950:CDS | 40.0% | |
| ! | AAACGATTTCCACCTTTTCC+TGG | + | tig0036760:6824-6843 | Msa1455950:intergenic | 40.0% |
| GAAAAGGTGGAAATCGTTTC+TGG | - | tig0036760:6825-6844 | Msa1455950:intron | 40.0% | |
| ! | TTCTGGAAATCAGTTGGTCT+TGG | - | tig0036760:6842-6861 | Msa1455950:intron | 40.0% |
| CCCCAAATCCAATACATTTG+AGG | + | tig0036760:7012-7031 | Msa1455950:intergenic | 40.0% | |
| TAATAGAGCCTCACATTCGA+GGG | - | tig0036760:7043-7062 | Msa1455950:intron | 40.0% | |
| ! | TGTTTGTCTGAGATTCCTCT+TGG | - | tig0036760:7308-7327 | Msa1455950:intron | 40.0% |
| AGATTCCTCTTGGCAATATC+AGG | - | tig0036760:7318-7337 | Msa1455950:intron | 40.0% | |
| TGGACACTTCTTGTCAATGT+AGG | + | tig0036760:7887-7906 | Msa1455950:intergenic | 40.0% | |
| AATGGGGACCATAGTATGAA+AGG | + | tig0036760:8039-8058 | Msa1455950:intergenic | 40.0% | |
| CATGATCTCCTTCCTTAACA+CGG | + | tig0036760:8175-8194 | Msa1455950:intergenic | 40.0% | |
| TTATTATCGGACAATGCAGG+TGG | - | tig0036760:8195-8214 | Msa1455950:intron | 40.0% | |
| TATTATCGGACAATGCAGGT+GGG | - | tig0036760:8196-8215 | Msa1455950:intron | 40.0% | |
| CTTGGGACACAATGTTATGA+TGG | - | tig0036760:8580-8599 | Msa1455950:intron | 40.0% | |
| !! | AGGTAGGTTTCAAGTTCGTG+CGG | - | tig0036760:6505-6524 | Msa1455950:three_prime_UTR | 45.0% |
| AGTTACTTGTTCAGCCATGG+TGG | + | tig0036760:6554-6573 | Msa1455950:intergenic | 45.0% | |
| GGAAGTTACTTGTTCAGCCA+TGG | + | tig0036760:6557-6576 | Msa1455950:intergenic | 45.0% | |
| ! | AGAACGAAGGAGTGTGAAGA+AGG | + | tig0036760:6578-6597 | Msa1455950:intergenic | 45.0% |
| AGAAATCTGGTAAGGGGAAG+AGG | - | tig0036760:6798-6817 | Msa1455950:CDS | 45.0% | |
| TTACCTTCAGTGGCTTCTCT+GGG | + | tig0036760:6878-6897 | Msa1455950:intergenic | 45.0% | |
| ATTACCTTCAGTGGCTTCTC+TGG | + | tig0036760:6879-6898 | Msa1455950:intergenic | 45.0% | |
| GTAATAGAGCCTCACATTCG+AGG | - | tig0036760:7042-7061 | Msa1455950:intron | 45.0% | |
| !! | CTGAGCGTCTAGCTTTGTAT+TGG | - | tig0036760:7283-7302 | Msa1455950:intron | 45.0% |
| TTCCTCTTGGCAATATCAGG+TGG | - | tig0036760:7321-7340 | Msa1455950:intron | 45.0% | |
| CGGTATCCGCTTGAAAGAAT+TGG | - | tig0036760:7627-7646 | Msa1455950:intron | 45.0% | |
| ! | TCTTGCAAGTGTTGTTGGGA+AGG | - | tig0036760:7688-7707 | Msa1455950:intron | 45.0% |
| !! | GACAAGAAGTGTCCATTCAC+CGG | - | tig0036760:7892-7911 | Msa1455950:intron | 45.0% |
| ATGGAAACATTGCCGGTGAA+TGG | + | tig0036760:7907-7926 | Msa1455950:intergenic | 45.0% | |
| CAATGCAGGTGGGACTTTAT+AGG | - | tig0036760:8206-8225 | Msa1455950:intron | 45.0% | |
| CACATTGAACCTCACAGTCT+TGG | + | tig0036760:8351-8370 | Msa1455950:intergenic | 45.0% | |
| ATCTAGTGGTGCAGGAAAGA+AGG | - | tig0036760:8394-8413 | Msa1455950:intron | 45.0% | |
| ! | GCAGGAAAGAAGGCTTTTAC+TGG | - | tig0036760:8404-8423 | Msa1455950:intron | 45.0% |
| !! | AGGTAGGTTTCAAGTTCGTG+CGG | - | tig0036760:6505-6524 | Msa1455950:three_prime_UTR | 45.0% |
| AGTTACTTGTTCAGCCATGG+TGG | + | tig0036760:6554-6573 | Msa1455950:intergenic | 45.0% | |
| GGAAGTTACTTGTTCAGCCA+TGG | + | tig0036760:6557-6576 | Msa1455950:intergenic | 45.0% | |
| ! | AGAACGAAGGAGTGTGAAGA+AGG | + | tig0036760:6578-6597 | Msa1455950:intergenic | 45.0% |
| AGAAATCTGGTAAGGGGAAG+AGG | - | tig0036760:6798-6817 | Msa1455950:CDS | 45.0% | |
| TTACCTTCAGTGGCTTCTCT+GGG | + | tig0036760:6878-6897 | Msa1455950:intergenic | 45.0% | |
| ATTACCTTCAGTGGCTTCTC+TGG | + | tig0036760:6879-6898 | Msa1455950:intergenic | 45.0% | |
| GTAATAGAGCCTCACATTCG+AGG | - | tig0036760:7042-7061 | Msa1455950:intron | 45.0% | |
| !! | CTGAGCGTCTAGCTTTGTAT+TGG | - | tig0036760:7283-7302 | Msa1455950:intron | 45.0% |
| TTCCTCTTGGCAATATCAGG+TGG | - | tig0036760:7321-7340 | Msa1455950:intron | 45.0% | |
| CGGTATCCGCTTGAAAGAAT+TGG | - | tig0036760:7627-7646 | Msa1455950:intron | 45.0% | |
| ! | TCTTGCAAGTGTTGTTGGGA+AGG | - | tig0036760:7688-7707 | Msa1455950:intron | 45.0% |
| !! | GACAAGAAGTGTCCATTCAC+CGG | - | tig0036760:7892-7911 | Msa1455950:intron | 45.0% |
| ATGGAAACATTGCCGGTGAA+TGG | + | tig0036760:7907-7926 | Msa1455950:intergenic | 45.0% | |
| CAATGCAGGTGGGACTTTAT+AGG | - | tig0036760:8206-8225 | Msa1455950:intron | 45.0% | |
| CACATTGAACCTCACAGTCT+TGG | + | tig0036760:8351-8370 | Msa1455950:intergenic | 45.0% | |
| ATCTAGTGGTGCAGGAAAGA+AGG | - | tig0036760:8394-8413 | Msa1455950:intron | 45.0% | |
| ! | GCAGGAAAGAAGGCTTTTAC+TGG | - | tig0036760:8404-8423 | Msa1455950:intron | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTGAA+TGG | - | tig0036760:7496-7515 | Msa1455950:intron | 5.0% |
| !!! | TTTTTTTTTTTTTATAATAC+AGG | - | tig0036760:7859-7878 | Msa1455950:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTGAA+TGG | - | tig0036760:7496-7515 | Msa1455950:intron | 5.0% |
| !!! | TTTTTTTTTTTTTATAATAC+AGG | - | tig0036760:7859-7878 | Msa1455950:intron | 5.0% |
| AGTGAGCGAGAGAAGAAGGT+AGG | - | tig0036760:6489-6508 | Msa1455950:three_prime_UTR | 50.0% | |
| TACCTTCAGTGGCTTCTCTG+GGG | + | tig0036760:6877-6896 | Msa1455950:intergenic | 50.0% | |
| GTTATGCTCCCTCGAATGTG+AGG | + | tig0036760:7054-7073 | Msa1455950:intergenic | 50.0% | |
| AGCCACCTGATATTGCCAAG+AGG | + | tig0036760:7326-7345 | Msa1455950:intergenic | 50.0% | |
| TCACCGGCAATGTTTCCATC+CGG | - | tig0036760:7908-7927 | Msa1455950:intron | 50.0% | |
| TTCCAGCTAAGATACGACCC+CGG | + | tig0036760:7930-7949 | Msa1455950:intergenic | 50.0% | |
| AAGCAAGGTGAGACATGAGC+TGG | + | tig0036760:8152-8171 | Msa1455950:intergenic | 50.0% | |
| CTCACCTTGCTTCCGTGTTA+AGG | - | tig0036760:8160-8179 | Msa1455950:intron | 50.0% | |
| CCTTCCTTAACACGGAAGCA+AGG | + | tig0036760:8167-8186 | Msa1455950:intergenic | 50.0% | |
| CCTTGCTTCCGTGTTAAGGA+AGG | - | tig0036760:8164-8183 | Msa1455950:intron | 50.0% | |
| TGGAGAGTGGCCTAAAGAAG+TGG | + | tig0036760:8331-8350 | Msa1455950:intergenic | 50.0% | |
| AACCTCACAGTCTTGGAGAG+TGG | + | tig0036760:8344-8363 | Msa1455950:intergenic | 50.0% | |
| GTGTTGAAAGTGATCCCAGC+TGG | - | tig0036760:8368-8387 | Msa1455950:intron | 50.0% | |
| ATCCCAGCTGGATCATCTAG+TGG | - | tig0036760:8380-8399 | Msa1455950:intron | 50.0% | |
| CACCACTAGATGATCCAGCT+GGG | + | tig0036760:8385-8404 | Msa1455950:intergenic | 50.0% | |
| AGTGAGCGAGAGAAGAAGGT+AGG | - | tig0036760:6489-6508 | Msa1455950:three_prime_UTR | 50.0% | |
| TACCTTCAGTGGCTTCTCTG+GGG | + | tig0036760:6877-6896 | Msa1455950:intergenic | 50.0% | |
| GTTATGCTCCCTCGAATGTG+AGG | + | tig0036760:7054-7073 | Msa1455950:intergenic | 50.0% | |
| AGCCACCTGATATTGCCAAG+AGG | + | tig0036760:7326-7345 | Msa1455950:intergenic | 50.0% | |
| TCACCGGCAATGTTTCCATC+CGG | - | tig0036760:7908-7927 | Msa1455950:intron | 50.0% | |
| TTCCAGCTAAGATACGACCC+CGG | + | tig0036760:7930-7949 | Msa1455950:intergenic | 50.0% | |
| AAGCAAGGTGAGACATGAGC+TGG | + | tig0036760:8152-8171 | Msa1455950:intergenic | 50.0% | |
| CTCACCTTGCTTCCGTGTTA+AGG | - | tig0036760:8160-8179 | Msa1455950:intron | 50.0% | |
| CCTTCCTTAACACGGAAGCA+AGG | + | tig0036760:8167-8186 | Msa1455950:intergenic | 50.0% | |
| CCTTGCTTCCGTGTTAAGGA+AGG | - | tig0036760:8164-8183 | Msa1455950:intron | 50.0% | |
| TGGAGAGTGGCCTAAAGAAG+TGG | + | tig0036760:8331-8350 | Msa1455950:intergenic | 50.0% | |
| AACCTCACAGTCTTGGAGAG+TGG | + | tig0036760:8344-8363 | Msa1455950:intergenic | 50.0% | |
| GTGTTGAAAGTGATCCCAGC+TGG | - | tig0036760:8368-8387 | Msa1455950:intron | 50.0% | |
| ATCCCAGCTGGATCATCTAG+TGG | - | tig0036760:8380-8399 | Msa1455950:intron | 50.0% | |
| CACCACTAGATGATCCAGCT+GGG | + | tig0036760:8385-8404 | Msa1455950:intergenic | 50.0% | |
| CCATGGTGGTAGAGTTGCAG+AGG | + | tig0036760:6540-6559 | Msa1455950:intergenic | 55.0% | |
| CCTCTGCAACTCTACCACCA+TGG | - | tig0036760:6537-6556 | Msa1455950:three_prime_UTR | 55.0% | |
| AAGGGGAAGAGGCCAGGAAA+AGG | - | tig0036760:6809-6828 | Msa1455950:intron | 55.0% | |
| ACCTTCAGTGGCTTCTCTGG+GGG | + | tig0036760:6876-6895 | Msa1455950:intergenic | 55.0% | |
| CACCGGCAATGTTTCCATCC+GGG | - | tig0036760:7909-7928 | Msa1455950:intron | 55.0% | |
| ACCGGCAATGTTTCCATCCG+GGG | - | tig0036760:7910-7929 | Msa1455950:intron | 55.0% | |
| ACCCCGGATGGAAACATTGC+CGG | + | tig0036760:7914-7933 | Msa1455950:intergenic | 55.0% | |
| AGCTAAGATACGACCCCGGA+TGG | + | tig0036760:7926-7945 | Msa1455950:intergenic | 55.0% | |
| ATCCGGGGTCGTATCTTAGC+TGG | - | tig0036760:7925-7944 | Msa1455950:intron | 55.0% | |
| GCACCACTAGATGATCCAGC+TGG | + | tig0036760:8386-8405 | Msa1455950:intergenic | 55.0% | |
| GCTGGATCATCTAGTGGTGC+AGG | - | tig0036760:8386-8405 | Msa1455950:intron | 55.0% | |
| CCATGGTGGTAGAGTTGCAG+AGG | + | tig0036760:6540-6559 | Msa1455950:intergenic | 55.0% | |
| CCTCTGCAACTCTACCACCA+TGG | - | tig0036760:6537-6556 | Msa1455950:three_prime_UTR | 55.0% | |
| AAGGGGAAGAGGCCAGGAAA+AGG | - | tig0036760:6809-6828 | Msa1455950:intron | 55.0% | |
| ACCTTCAGTGGCTTCTCTGG+GGG | + | tig0036760:6876-6895 | Msa1455950:intergenic | 55.0% | |
| CACCGGCAATGTTTCCATCC+GGG | - | tig0036760:7909-7928 | Msa1455950:intron | 55.0% | |
| ACCGGCAATGTTTCCATCCG+GGG | - | tig0036760:7910-7929 | Msa1455950:intron | 55.0% | |
| ACCCCGGATGGAAACATTGC+CGG | + | tig0036760:7914-7933 | Msa1455950:intergenic | 55.0% | |
| AGCTAAGATACGACCCCGGA+TGG | + | tig0036760:7926-7945 | Msa1455950:intergenic | 55.0% | |
| ATCCGGGGTCGTATCTTAGC+TGG | - | tig0036760:7925-7944 | Msa1455950:intron | 55.0% | |
| GCACCACTAGATGATCCAGC+TGG | + | tig0036760:8386-8405 | Msa1455950:intergenic | 55.0% | |
| GCTGGATCATCTAGTGGTGC+AGG | - | tig0036760:8386-8405 | Msa1455950:intron | 55.0% | |
| TCTGGTAAGGGGAAGAGGCC+AGG | - | tig0036760:6803-6822 | Msa1455950:intron | 60.0% | |
| GGGAAGAGGCCAGGAAAAGG+TGG | - | tig0036760:6812-6831 | Msa1455950:intron | 60.0% | |
| ACCCCCAGAGAAGCCACTGA+AGG | - | tig0036760:6872-6891 | Msa1455950:intron | 60.0% | |
| GGCCACTCTCCAAGACTGTG+AGG | - | tig0036760:8339-8358 | Msa1455950:CDS | 60.0% | |
| TCTGGTAAGGGGAAGAGGCC+AGG | - | tig0036760:6803-6822 | Msa1455950:intron | 60.0% | |
| GGGAAGAGGCCAGGAAAAGG+TGG | - | tig0036760:6812-6831 | Msa1455950:intron | 60.0% | |
| ACCCCCAGAGAAGCCACTGA+AGG | - | tig0036760:6872-6891 | Msa1455950:intron | 60.0% | |
| GGCCACTCTCCAAGACTGTG+AGG | - | tig0036760:8339-8358 | Msa1455950:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0036760 | gene | 6486 | 8671 | 6486 | ID=Msa1455950;Name=Msa1455950 |
| tig0036760 | mRNA | 6486 | 8671 | 6486 | ID=Msa1455950-mRNA-1;Parent=Msa1455950;Name=Msa1455950-mRNA-1;_AED=0.12;_eAED=0.12;_QI=70|1|1|1|1|1|6|238|160 |
| tig0036760 | exon | 6486 | 6817 | 6486 | ID=Msa1455950-mRNA-1:exon:20499;Parent=Msa1455950-mRNA-1 |
| tig0036760 | exon | 6944 | 7033 | 6944 | ID=Msa1455950-mRNA-1:exon:20498;Parent=Msa1455950-mRNA-1 |
| tig0036760 | exon | 7132 | 7276 | 7132 | ID=Msa1455950-mRNA-1:exon:20497;Parent=Msa1455950-mRNA-1 |
| tig0036760 | exon | 8264 | 8364 | 8264 | ID=Msa1455950-mRNA-1:exon:20496;Parent=Msa1455950-mRNA-1 |
| tig0036760 | exon | 8458 | 8498 | 8458 | ID=Msa1455950-mRNA-1:exon:20495;Parent=Msa1455950-mRNA-1 |
| tig0036760 | exon | 8590 | 8671 | 8590 | ID=Msa1455950-mRNA-1:exon:20494;Parent=Msa1455950-mRNA-1 |
| tig0036760 | five_prime_UTR | 8602 | 8671 | 8602 | ID=Msa1455950-mRNA-1:five_prime_utr;Parent=Msa1455950-mRNA-1 |
| tig0036760 | CDS | 8590 | 8601 | 8590 | ID=Msa1455950-mRNA-1:cds;Parent=Msa1455950-mRNA-1 |
| tig0036760 | CDS | 8458 | 8498 | 8458 | ID=Msa1455950-mRNA-1:cds;Parent=Msa1455950-mRNA-1 |
| tig0036760 | CDS | 8264 | 8364 | 8264 | ID=Msa1455950-mRNA-1:cds;Parent=Msa1455950-mRNA-1 |
| tig0036760 | CDS | 7132 | 7276 | 7132 | ID=Msa1455950-mRNA-1:cds;Parent=Msa1455950-mRNA-1 |
| tig0036760 | CDS | 6944 | 7033 | 6944 | ID=Msa1455950-mRNA-1:cds;Parent=Msa1455950-mRNA-1 |
| tig0036760 | CDS | 6724 | 6817 | 6724 | ID=Msa1455950-mRNA-1:cds;Parent=Msa1455950-mRNA-1 |
| tig0036760 | three_prime_UTR | 6486 | 6723 | 6486 | ID=Msa1455950-mRNA-1:three_prime_utr;Parent=Msa1455950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
