AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706500 MtrunA17_Chr8g0385771 99.171 603 5 0 1 603 1 603 0.0 1238
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706500 AT5G61970.1 74.917 602 144 3 1 599 1 598 0.0 950

Find 167 sgRNAs with CRISPR-Local

Find 510 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACCAGTGATTGAGAATT+TGG 0.115111 4_4:-79487369 None:intergenic
TCATAATCAATGTTCAAAAT+TGG 0.161311 4_4:-79494293 None:intergenic
TTGAATTATTGAAGACTTAA+TGG 0.166875 4_4:+79487277 Msa0706500:intron
AGCTAACTTCTTCTGGCTTT+TGG 0.191919 4_4:-79492196 None:intergenic
GGCTTTATAAGCAGAATATT+TGG 0.214752 4_4:+79494052 Msa0706500:CDS
TTGAGTTGCCTAGAGATATT+TGG 0.228836 4_4:+79494176 Msa0706500:three_prime_UTR
GTCAAATTCCGCTGCGATTC+CGG 0.238104 4_4:-79487026 None:intergenic
CCTCTAGTTTAGCTTTAAAA+AGG 0.275792 4_4:-79490137 None:intergenic
CAAAATGGCAACCCTTGTTT+TGG 0.275936 4_4:-79490404 None:intergenic
TGATCAGAATTGGTTGATTT+CGG 0.285982 4_4:-79487338 None:intergenic
TCAGCAAAGCTAACTTCTTC+TGG 0.288214 4_4:-79492203 None:intergenic
TCTTCATGTGATTCTCTATT+CGG 0.294404 4_4:+79488929 Msa0706500:CDS
CTATCTGATTTAGTCAGTTC+TGG 0.303730 4_4:+79492167 Msa0706500:CDS
AGATACTGCCTTCACAAAAT+TGG 0.305322 4_4:+79490051 Msa0706500:CDS
AGCATATTTGATTCAGTGTT+TGG 0.315353 4_4:+79494078 Msa0706500:exon
GGCAGATTCTAGGACATCTT+TGG 0.324881 4_4:+79489091 Msa0706500:CDS
TGAATTATTGAAGACTTAAT+GGG 0.325650 4_4:+79487278 Msa0706500:intron
TACGAGGAGTTAGGGAAATA+TGG 0.327193 4_4:+79489970 Msa0706500:CDS
CTTCCATGACAGAATTTCAT+TGG 0.334299 4_4:+79490353 Msa0706500:CDS
GTGCGGTCAAGGCAGATTCT+AGG 0.336790 4_4:+79489081 Msa0706500:CDS
GTTAGGGAAATATGGAGATT+TGG 0.338508 4_4:+79489978 Msa0706500:CDS
CATAATCAATGTTCAAAATT+GGG 0.338972 4_4:-79494292 None:intergenic
CGGGCAATTGCCTGGAAAGC+TGG 0.340905 4_4:-79493941 None:intergenic
GGATATCTTTCTCCAGCTCC+TGG 0.341220 4_4:-79491582 None:intergenic
ACTACTAAACATTGGCGATA+TGG 0.346999 4_4:+79490098 Msa0706500:CDS
CATTTGATATTGGAAATCTA+TGG 0.352525 4_4:-79490381 None:intergenic
AGGCTGTATTCGGGCTGATT+TGG 0.353297 4_4:+79491687 Msa0706500:CDS
AATTCCCAGATATTCAAAAT+AGG 0.359611 4_4:+79494002 Msa0706500:CDS
AAGATACCAACCTTTCAAAA+TGG 0.363789 4_4:-79490419 None:intergenic
TATAAGCGAACAAGCTCTTC+AGG 0.367288 4_4:-79491975 None:intergenic
ATGATGCTAGAGGCTGTATT+CGG 0.368177 4_4:+79491677 Msa0706500:CDS
AAAACTACAAAGGCAACTAT+TGG 0.368252 4_4:-79494346 None:intergenic
AAACAAATTGCATCGGAATC+AGG 0.368525 4_4:+79486970 Msa0706500:five_prime_UTR
AGGGCTGTATACGAGGAGTT+AGG 0.371688 4_4:+79489961 Msa0706500:intron
GGAAAGCTTCAAATGTTAGA+TGG 0.373121 4_4:+79492982 Msa0706500:CDS
AAGGCTGTCAGTGCTGTCTT+AGG 0.375481 4_4:+79491858 Msa0706500:CDS
GGGAACAATCTGATCAGAAT+TGG 0.378268 4_4:-79487348 None:intergenic
GTCCAGCACAATCGGGTTAC+GGG 0.380969 4_4:-79493960 None:intergenic
TGAGATGCATTTGGTCCATT+TGG 0.384327 4_4:-79488993 None:intergenic
GGGCAATTGCCTGGAAAGCT+GGG 0.390320 4_4:-79493940 None:intergenic
AAACATCAAGTTTCTCCAAT+AGG 0.391438 4_4:-79493859 None:intergenic
AGCTCCGGTCAATGATATAT+TGG 0.393649 4_4:-79493669 None:intergenic
TACGCAAGGTCCAGCACAAT+CGG 0.400545 4_4:-79493968 None:intergenic
TCAGTTGGAGAAATTCCTAT+TGG 0.402440 4_4:+79493844 Msa0706500:intron
ATTTATACAACCTCCTCAAT+CGG 0.402621 4_4:-79487733 None:intergenic
CTTATATGATCTCTTGCTAC+AGG 0.403111 4_4:+79491992 Msa0706500:CDS
GACTATGGTGAAAGAATTAG+AGG 0.405813 4_4:+79493550 Msa0706500:intron
TGTTTGAGCAAGATCAGAAC+TGG 0.406278 4_4:+79489675 Msa0706500:CDS
CAACAAAAGGTTGCGCTCAA+TGG 0.416938 4_4:-79491889 None:intergenic
AGAGTGTTCATGCAAAAGTT+TGG 0.418884 4_4:+79492226 Msa0706500:CDS
GCGAACAAGCTCTTCAGGTT+TGG 0.420651 4_4:-79491970 None:intergenic
ATGACAGAATTTCATTGGCT+TGG 0.420947 4_4:+79490358 Msa0706500:CDS
GGTCCAGCACAATCGGGTTA+CGG 0.428004 4_4:-79493961 None:intergenic
TAGATTCGTTGAGATGCATT+TGG 0.428149 4_4:-79489002 None:intergenic
CAACAAACTCCCCTTCATAT+AGG 0.430300 4_4:-79489654 None:intergenic
AAACCAGTGATTGAGAATTT+GGG 0.431036 4_4:-79487368 None:intergenic
TCGGGTTACGGGCAATTGCC+TGG 0.434213 4_4:-79493949 None:intergenic
AGTTGTATAGAACATGCATT+GGG 0.445865 4_4:+79493599 Msa0706500:CDS
AGAACATGCATTGGGGATCA+TGG 0.454533 4_4:+79493607 Msa0706500:CDS
GTTCCCAAATTCTCAATCAC+TGG 0.456061 4_4:+79487365 Msa0706500:CDS
TGATGCTAGAGGCTGTATTC+GGG 0.459700 4_4:+79491678 Msa0706500:CDS
TGAAGGCAGTATCTGATACT+AGG 0.459854 4_4:-79490042 None:intergenic
TCTATTCGGCGGAGAGAGCT+TGG 0.459965 4_4:+79488943 Msa0706500:CDS
AGTGACATTAGACTCAGTTA+AGG 0.466330 4_4:-79487798 None:intergenic
ATCATTGACCGGAGCTGAGC+GGG 0.467588 4_4:+79493676 Msa0706500:CDS
CCCGCTCACGACACAAAACT+TGG 0.470661 4_4:-79490005 None:intergenic
AATGTTAGATGGCAATAGTA+AGG 0.476979 4_4:+79492993 Msa0706500:CDS
TTGCAACCCTGACCAACAAA+AGG 0.482338 4_4:-79491902 None:intergenic
AACAAAGGAACCCGCGTCAT+CGG 0.482732 4_4:-79494127 None:intergenic
CAGAGGCTTGTAGATTTGAC+TGG 0.485146 4_4:-79490074 None:intergenic
GTAAATTTCCAAATATCTCT+AGG 0.485327 4_4:-79494184 None:intergenic
GAAAGATATCCATGGTCCCT+TGG 0.491522 4_4:+79491594 Msa0706500:CDS
GAGAAAAGGCAGCTTCCAAA+TGG 0.491978 4_4:+79488978 Msa0706500:CDS
GGGCTGTATACGAGGAGTTA+GGG 0.493311 4_4:+79489962 Msa0706500:intron
TCTCAACGAATCTATCTGAT+TGG 0.494018 4_4:+79489011 Msa0706500:CDS
TGCCCGTAACCCGATTGTGC+TGG 0.494225 4_4:+79493958 Msa0706500:CDS
AGTCTAATGTCACTGAAGTA+AGG 0.494583 4_4:+79487807 Msa0706500:CDS
GGCTTACGAGTCCTATATGA+AGG 0.496687 4_4:+79489643 Msa0706500:intron
AGTTTAGCTGAAGATGCCTT+AGG 0.498692 4_4:+79492961 Msa0706500:CDS
GGAGTCATGCCATGGAGAAA+AGG 0.500377 4_4:+79488964 Msa0706500:CDS
CAATATCAAATGCCAAAACA+AGG 0.504437 4_4:+79490392 Msa0706500:CDS
TCGTATACTTGCCACGACCG+TGG 0.504552 4_4:-79487769 None:intergenic
TTGAGATCTTGCCTCAGCCA+TGG 0.506412 4_4:-79490323 None:intergenic
TATTTCAGCGGACAAAAGAC+TGG 0.510192 4_4:+79491624 Msa0706500:CDS
ACTTTCTGCATTTCCTGCAG+TGG 0.513474 4_4:-79491808 None:intergenic
CATACAGTGTGGCTGGAAAG+AGG 0.514081 4_4:+79492905 Msa0706500:CDS
ATTATGTACCCGCTCAGCTC+CGG 0.514586 4_4:-79493684 None:intergenic
TGATTTGAATGGTCTTGATA+AGG 0.515403 4_4:+79491839 Msa0706500:CDS
TTGAAGTTTACCCACGGTCG+TGG 0.516226 4_4:+79487758 Msa0706500:CDS
TTTATACAACCTCCTCAATC+GGG 0.522055 4_4:-79487732 None:intergenic
CGTATACTTGCCACGACCGT+GGG 0.522528 4_4:-79487768 None:intergenic
GATATCTTTCTCCAGCTCCT+GGG 0.522684 4_4:-79491581 None:intergenic
TAAAGCACTTCAAAAGTGCT+AGG 0.524363 4_4:+79489708 Msa0706500:CDS
TCACCGATTTCGATCCGAGT+TGG 0.526538 4_4:-79494413 None:intergenic
TGATGTTTATGAGTCTGCTG+TGG 0.529265 4_4:+79493874 Msa0706500:CDS
GTGTTTGTACCAGGCTGCCA+TGG 0.530914 4_4:+79490306 Msa0706500:intron
TAACATTTGAAGCTTTCCTA+AGG 0.531683 4_4:-79492977 None:intergenic
GGTATTGTACAGCCCGATTG+AGG 0.540160 4_4:+79487720 Msa0706500:CDS
ATCTCCAATATATCATTGAC+CGG 0.542724 4_4:+79493665 Msa0706500:CDS
CTGATTTAGTCAGTTCTGGA+AGG 0.544771 4_4:+79492171 Msa0706500:CDS
TGATATATTGGAGATCCCTT+CGG 0.546542 4_4:-79493657 None:intergenic
TGATTTAGTCAGTTCTGGAA+GGG 0.550208 4_4:+79492172 Msa0706500:CDS
GCAAAGTCATACAGTGTGGC+TGG 0.551315 4_4:+79492898 Msa0706500:CDS
GATGTTTATGAGTCTGCTGT+GGG 0.553817 4_4:+79493875 Msa0706500:CDS
TATTCAAAATAGGATGAAGA+AGG 0.553984 4_4:+79494012 Msa0706500:CDS
AGAGAATCAATCATCTGCCA+TGG 0.554301 4_4:+79487304 Msa0706500:CDS
ACGCAAGGTCCAGCACAATC+GGG 0.554921 4_4:-79493967 None:intergenic
TTTGTGTCGTGAGCGGGTTG+AGG 0.555876 4_4:+79490011 Msa0706500:CDS
GTACCAGGCTGCCATGGCTG+AGG 0.557385 4_4:+79490312 Msa0706500:intron
GCAATTGCCTGGAAAGCTGG+GGG 0.559921 4_4:-79493938 None:intergenic
ATCAGGACACAACTCGGAGT+CGG 0.561098 4_4:+79486987 Msa0706500:five_prime_UTR
TTTCTTGAAACCGATGACGC+GGG 0.564639 4_4:+79494117 Msa0706500:three_prime_UTR
GCCAATGTTTAGTAGTTCAG+AGG 0.565196 4_4:-79490091 None:intergenic
AAGAAGGACAAAAGAGCAAA+GGG 0.565383 4_4:+79494028 Msa0706500:CDS
AACCCTAAAACAAATTGCAT+CGG 0.567650 4_4:+79486963 None:intergenic
ATACAGTGTGGCTGGAAAGA+GGG 0.567964 4_4:+79492906 Msa0706500:CDS
GGCAATTGCCTGGAAAGCTG+GGG 0.568944 4_4:-79493939 None:intergenic
CAGTTGTATAGAACATGCAT+TGG 0.572812 4_4:+79493598 Msa0706500:CDS
ATAATCAATGTTCAAAATTG+GGG 0.574485 4_4:-79494291 None:intergenic
GTTCTATACAACTGTTAGAA+CGG 0.575188 4_4:-79493589 None:intergenic
TGGGGATCATGGAGGAGAAG+AGG 0.577029 4_4:+79493618 Msa0706500:CDS
GAATACAGCCTCTAGCATCA+TGG 0.586389 4_4:-79491675 None:intergenic
TCTGCATACCATGATGCTAG+AGG 0.587070 4_4:+79491667 Msa0706500:CDS
TAGGACATCTTTGGAAGCTG+AGG 0.588289 4_4:+79489100 Msa0706500:CDS
TTTCGGATCATCGACTTCCA+TGG 0.588879 4_4:-79487321 None:intergenic
GCAAGATCAGAACTGGGATG+TGG 0.590766 4_4:+79489682 Msa0706500:CDS
ATGCAGCATGGTTTGCGTCA+CGG 0.594530 4_4:+79487542 Msa0706500:CDS
GAGAGCTTGGAGTCATGCCA+TGG 0.598852 4_4:+79488956 Msa0706500:CDS
CTAAACATTGGCGATATGGA+AGG 0.599650 4_4:+79490102 Msa0706500:CDS
GCCTCTGAACTACTAAACAT+TGG 0.599852 4_4:+79490090 Msa0706500:CDS
GGTTGCGCAAGGCAGTAAAG+TGG 0.604150 4_4:+79489036 Msa0706500:CDS
ATCGGAATCAGGACACAACT+CGG 0.604445 4_4:+79486981 Msa0706500:five_prime_UTR
AAGCCAATGAAATTCTGTCA+TGG 0.604976 4_4:-79490356 None:intergenic
CTCAAGAGAATATCTCCGAA+GGG 0.608613 4_4:+79493642 Msa0706500:CDS
GAAGAAGGACAAAAGAGCAA+AGG 0.610571 4_4:+79494027 Msa0706500:CDS
ACTCAAGAGAATATCTCCGA+AGG 0.611069 4_4:+79493641 Msa0706500:CDS
CGGTATCCAGAAAATCATCA+AGG 0.614471 4_4:+79487051 Msa0706500:five_prime_UTR
TCATGTGATTCTCTATTCGG+CGG 0.614718 4_4:+79488932 Msa0706500:CDS
GCTTACGAGTCCTATATGAA+GGG 0.614942 4_4:+79489644 Msa0706500:CDS
ATTCGATAGTGTTATACGCA+AGG 0.621387 4_4:-79493982 None:intergenic
AACGAATCTATCTGATTGGT+AGG 0.622250 4_4:+79489015 Msa0706500:CDS
AAATCTTTGAAGTTTACCCA+CGG 0.622381 4_4:+79487752 Msa0706500:CDS
ATTGTACAGCCCGATTGAGG+AGG 0.626640 4_4:+79487723 Msa0706500:CDS
TCTGATTGGTAGGTTGCGCA+AGG 0.628782 4_4:+79489025 Msa0706500:CDS
GTTGCGCAAGGCAGTAAAGT+GGG 0.628797 4_4:+79489037 Msa0706500:CDS
ACGGAGATTACACTCGCTAT+CGG 0.630014 4_4:+79487561 Msa0706500:CDS
CGGAAGTGAACTGAACTCGC+CGG 0.630741 4_4:+79487007 Msa0706500:five_prime_UTR
CCCGTCAATTAAAACTACAA+AGG 0.633528 4_4:-79494356 None:intergenic
AAATCAGCACAAATGCAGCA+TGG 0.634136 4_4:+79487530 Msa0706500:CDS
CATCTCATAATTCTCAACAA+AGG 0.635370 4_4:-79494142 None:intergenic
ATTTCTTGAAACCGATGACG+CGG 0.647556 4_4:+79494116 Msa0706500:three_prime_UTR
ATTTAACAGGGCTGTATACG+AGG 0.648075 4_4:+79489954 Msa0706500:intron
AATATCAAATGCCAAAACAA+GGG 0.652385 4_4:+79490393 Msa0706500:CDS
AGTGTGAAAGATGATTTGAA+TGG 0.655868 4_4:+79491828 Msa0706500:CDS
CTTACGAGTCCTATATGAAG+GGG 0.656319 4_4:+79489645 Msa0706500:CDS
CTTGGCAGAAAATATTTCAG+CGG 0.661052 4_4:+79491612 Msa0706500:CDS
CAATTGCCTGGAAAGCTGGG+GGG 0.661981 4_4:-79493937 None:intergenic
ATCGCAGCGGAATTTGACGC+CGG 0.668025 4_4:+79487031 Msa0706500:five_prime_UTR
AGATATTTGGAAATTTACAG+CGG 0.668791 4_4:+79494189 Msa0706500:three_prime_UTR
TATCATTGACCGGAGCTGAG+CGG 0.688933 4_4:+79493675 Msa0706500:CDS
TGAACTCGCCGGAATCGCAG+CGG 0.693161 4_4:+79487018 Msa0706500:five_prime_UTR
ACATGCATTGGGGATCATGG+AGG 0.704917 4_4:+79493610 Msa0706500:CDS
GAGCTGGAGAAAGATATCCA+TGG 0.711540 4_4:+79491586 Msa0706500:CDS
GTTTGAGCAAGATCAGAACT+GGG 0.716721 4_4:+79489676 Msa0706500:CDS
AAGGACAAAAGAGCAAAGGG+TGG 0.733205 4_4:+79494031 Msa0706500:CDS
GTTGTATAGAACATGCATTG+GGG 0.748586 4_4:+79493600 Msa0706500:CDS
TGTTGCAAAGTCATACAGTG+TGG 0.777758 4_4:+79492894 Msa0706500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATATATATATTTTTT+GGG + chr4_4:79494322-79494341 Msa0706500:three_prime_UTR 0.0%
!!! ATTTTTAAAAAAAAGGAAAA+AGG - chr4_4:79488797-79488816 None:intergenic 10.0%
!!! GTAAAACATTTTTAAAAAAA+AGG - chr4_4:79488804-79488823 None:intergenic 10.0%
!! CTATTAAATTGAAAAAAAAA+AGG + chr4_4:79490460-79490479 Msa0706500:intron 10.0%
!! TAAATATATGCTAAAAATAT+TGG + chr4_4:79490680-79490699 Msa0706500:intron 10.0%
!!! AAATAAACTTTTCATTTTTC+TGG + chr4_4:79488842-79488861 Msa0706500:intron 15.0%
!! TAGATTAAAATAGTAGAAAA+GGG - chr4_4:79489556-79489575 None:intergenic 15.0%
!! ATAGATTAAAATAGTAGAAA+AGG - chr4_4:79489557-79489576 None:intergenic 15.0%
!!! TTTTCTACTATTTTAATCTA+TGG + chr4_4:79489556-79489575 Msa0706500:intron 15.0%
!! AAGTCAAATATTATAAATCA+AGG - chr4_4:79489750-79489769 None:intergenic 15.0%
!! TTGATTTATAATATTTGACT+TGG + chr4_4:79489749-79489768 Msa0706500:intron 15.0%
!! TAACAAATATATTATGTGTA+TGG - chr4_4:79490948-79490967 None:intergenic 15.0%
!!! ACATAATATATTTGTTAATG+TGG + chr4_4:79490951-79490970 Msa0706500:intron 15.0%
!! AAATCCAAAAAAGAAAAAAA+TGG - chr4_4:79491435-79491454 None:intergenic 15.0%
!!! TTTTACAGAAGTTAAAAATT+TGG - chr4_4:79492387-79492406 None:intergenic 15.0%
!!! AAATAAAAAACTCTAAAGAT+GGG - chr4_4:79492487-79492506 None:intergenic 15.0%
!!! TAAATAAAAAACTCTAAAGA+TGG - chr4_4:79492488-79492507 None:intergenic 15.0%
!!! AGTTATTTTTTAAGATCAAA+TGG + chr4_4:79493023-79493042 Msa0706500:intron 15.0%
!!! GATTTTTCAAATGATTTTTT+TGG + chr4_4:79493067-79493086 Msa0706500:intron 15.0%
!! CATGTATAAATTTCACTAAT+TGG + chr4_4:79487137-79487156 Msa0706500:intron 20.0%
!! TTGAATTATTGAAGACTTAA+TGG + chr4_4:79487277-79487296 Msa0706500:intron 20.0%
!! TGAATTATTGAAGACTTAAT+GGG + chr4_4:79487278-79487297 Msa0706500:intron 20.0%
!! TTAATCGTTAGTAAAAGAAA+CGG - chr4_4:79487425-79487444 None:intergenic 20.0%
!! TATAGAATTCAAACGTTATA+CGG - chr4_4:79487660-79487679 None:intergenic 20.0%
!! AAAAAAAGGAAAAAGGAAAA+AGG - chr4_4:79488790-79488809 None:intergenic 20.0%
!! AAAAAATATTACCAAAAGAG+AGG - chr4_4:79489256-79489275 None:intergenic 20.0%
!!! TTCATTACAACTTCTTTTAA+AGG - chr4_4:79489447-79489466 None:intergenic 20.0%
!!! GAATAGAAAAAAAAGTTGAT+TGG + chr4_4:79489511-79489530 Msa0706500:intron 20.0%
!! TATAACTTACTTGAAGAAAA+GGG + chr4_4:79490179-79490198 Msa0706500:intron 20.0%
!!! AACTTCATCTTTTTTAAGTT+TGG - chr4_4:79490497-79490516 None:intergenic 20.0%
!! AAATTCAATTTAACACCAAA+AGG - chr4_4:79490898-79490917 None:intergenic 20.0%
!! TATATTATGTGTATGGATTT+AGG - chr4_4:79490941-79490960 None:intergenic 20.0%
!!! AAAAAATTGTTAGTTTCCTT+TGG - chr4_4:79491013-79491032 None:intergenic 20.0%
!!! AAAAAAATGTTAGTTTCCTT+TGG - chr4_4:79491151-79491170 None:intergenic 20.0%
!! TTACATTGTCAAGATTTAAT+TGG + chr4_4:79491218-79491237 Msa0706500:intron 20.0%
!!! ACTACCATTTTTTTCTTTTT+TGG + chr4_4:79491428-79491447 Msa0706500:intron 20.0%
!!! TTTTAACAGATGATGATTAT+AGG + chr4_4:79492512-79492531 Msa0706500:intron 20.0%
!! AGAAGATTATAAGAAACAAA+GGG - chr4_4:79493378-79493397 None:intergenic 20.0%
!! TAGAAGATTATAAGAAACAA+AGG - chr4_4:79493379-79493398 None:intergenic 20.0%
!!! ATTTCTTTTCCTTTTCAATT+TGG + chr4_4:79493525-79493544 Msa0706500:intron 20.0%
!!! TGTACTTTTCAACAAAAAAA+AGG - chr4_4:79494245-79494264 None:intergenic 20.0%
!! ATAATCAATGTTCAAAATTG+GGG - chr4_4:79494294-79494313 None:intergenic 20.0%
!! CATAATCAATGTTCAAAATT+GGG - chr4_4:79494295-79494314 None:intergenic 20.0%
!! TCATAATCAATGTTCAAAAT+TGG - chr4_4:79494296-79494315 None:intergenic 20.0%
!!! AAATTGAAGATTGATTTGAG+AGG - chr4_4:79487192-79487211 None:intergenic 25.0%
!! AAAATTAGATCTAGCATTGA+TGG - chr4_4:79487221-79487240 None:intergenic 25.0%
! ATCAATGACATTTCAAAAGA+CGG - chr4_4:79487632-79487651 None:intergenic 25.0%
! AACGTTTGAATTCTATAGAT+TGG + chr4_4:79487663-79487682 Msa0706500:intron 25.0%
!!! AAGAATGATTTGGTTTCAAT+TGG + chr4_4:79487931-79487950 Msa0706500:intron 25.0%
! AATGGAAAAACATCTAAAAG+TGG - chr4_4:79488679-79488698 None:intergenic 25.0%
! TAAATGATGATTTCGTATCA+AGG - chr4_4:79488752-79488771 None:intergenic 25.0%
! TTGATACGAAATCATCATTT+AGG + chr4_4:79488751-79488770 Msa0706500:intron 25.0%
!!! TGGAATTTACTTTTGAATTC+AGG + chr4_4:79488904-79488923 Msa0706500:intron 25.0%
!!! TTTGTTTTCACAATTTTGTG+CGG + chr4_4:79489064-79489083 Msa0706500:CDS 25.0%
! TTAATCAGTATTGCAACAAA+AGG + chr4_4:79489131-79489150 Msa0706500:intron 25.0%
! CCATTTGATGTAAATAACAA+TGG - chr4_4:79489174-79489193 None:intergenic 25.0%
!!! CCATTGTTATTTACATCAAA+TGG + chr4_4:79489171-79489190 Msa0706500:intron 25.0%
! TTAATGCTTAGAGTTATTGT+TGG + chr4_4:79489340-79489359 Msa0706500:intron 25.0%
!!! ATAATATTTGACTTGGAGAA+AGG + chr4_4:79489756-79489775 Msa0706500:intron 25.0%
!!! TAATATTTGACTTGGAGAAA+GGG + chr4_4:79489757-79489776 Msa0706500:intron 25.0%
! TTACACAATAAACAAGTGTT+TGG - chr4_4:79489864-79489883 None:intergenic 25.0%
! GTATAACTTACTTGAAGAAA+AGG + chr4_4:79490178-79490197 Msa0706500:intron 25.0%
! CATTTGATATTGGAAATCTA+TGG - chr4_4:79490384-79490403 None:intergenic 25.0%
! AATATCAAATGCCAAAACAA+GGG + chr4_4:79490393-79490412 Msa0706500:CDS 25.0%
!!! TTTTGGAATCTTTTTCTTTC+TGG + chr4_4:79490593-79490612 Msa0706500:intron 25.0%
!!! TTTGGAATCTTTTTCTTTCT+GGG + chr4_4:79490594-79490613 Msa0706500:intron 25.0%
! AAATTGTTAGTTAACTCATG+TGG + chr4_4:79490978-79490997 Msa0706500:intron 25.0%
! TTCATGAATCACAAACATAA+GGG - chr4_4:79491404-79491423 None:intergenic 25.0%
! ATTCATGAATCACAAACATA+AGG - chr4_4:79491405-79491424 None:intergenic 25.0%
!! TTTATTCTTCTGTGCATTTT+AGG + chr4_4:79491785-79491804 Msa0706500:intron 25.0%
! ACAAATTATCATTCCATTTG+AGG - chr4_4:79492114-79492133 None:intergenic 25.0%
! GGAAGCAAATAAATTAAGAA+GGG - chr4_4:79492310-79492329 None:intergenic 25.0%
! AGGAAGCAAATAAATTAAGA+AGG - chr4_4:79492311-79492330 None:intergenic 25.0%
! CATTTGAAAAATCAACAAAC+AGG - chr4_4:79493060-79493079 None:intergenic 25.0%
!!! TTCAAATGATTTTTTTGGTC+TGG + chr4_4:79493072-79493091 Msa0706500:intron 25.0%
! GAAGGAGATCATAATATAAA+AGG - chr4_4:79493222-79493241 None:intergenic 25.0%
! AATTCCCAGATATTCAAAAT+AGG + chr4_4:79494002-79494021 Msa0706500:CDS 25.0%
!!! TCATCCTATTTTGAATATCT+GGG - chr4_4:79494009-79494028 None:intergenic 25.0%
!!! TTCATCCTATTTTGAATATC+TGG - chr4_4:79494010-79494029 None:intergenic 25.0%
! TATTCAAAATAGGATGAAGA+AGG + chr4_4:79494012-79494031 Msa0706500:CDS 25.0%
! GTAAATTTCCAAATATCTCT+AGG - chr4_4:79494187-79494206 None:intergenic 25.0%
! AGATATTTGGAAATTTACAG+CGG + chr4_4:79494189-79494208 Msa0706500:three_prime_UTR 25.0%
!! ATATTTAAAAACTGATGACG+TGG + chr4_4:79494216-79494235 Msa0706500:three_prime_UTR 25.0%
!! TATTTAAAAACTGATGACGT+GGG + chr4_4:79494217-79494236 Msa0706500:three_prime_UTR 25.0%
!! TGAATACCTTGATGATTTTC+TGG - chr4_4:79487060-79487079 None:intergenic 30.0%
! TGATCAGAATTGGTTGATTT+CGG - chr4_4:79487341-79487360 None:intergenic 30.0%
AAACCAGTGATTGAGAATTT+GGG - chr4_4:79487371-79487390 None:intergenic 30.0%
! ACTTTTTACATTGACACTGT+AGG + chr4_4:79487696-79487715 Msa0706500:intron 30.0%
ATTTATACAACCTCCTCAAT+CGG - chr4_4:79487736-79487755 None:intergenic 30.0%
!! AAATCTTTGAAGTTTACCCA+CGG + chr4_4:79487752-79487771 Msa0706500:CDS 30.0%
GAGTGTTAGAAAGAATGATT+TGG + chr4_4:79487921-79487940 Msa0706500:intron 30.0%
TAATTCGATAGCAATGAAGA+TGG - chr4_4:79487970-79487989 None:intergenic 30.0%
TTAACAATCTACACTCTACA+GGG - chr4_4:79488195-79488214 None:intergenic 30.0%
TGTAGATTGTTAAGATGAGT+TGG + chr4_4:79488202-79488221 Msa0706500:intron 30.0%
GTAGATTGTTAAGATGAGTT+GGG + chr4_4:79488203-79488222 Msa0706500:intron 30.0%
! TTTTGTTAAAAGTCCCACAT+TGG + chr4_4:79488354-79488373 Msa0706500:intron 30.0%
TATACTTGGCCTAATCTATA+GGG - chr4_4:79488427-79488446 None:intergenic 30.0%
TTATACTTGGCCTAATCTAT+AGG - chr4_4:79488428-79488447 None:intergenic 30.0%
TCTACTTATTTGTCAGTACT+GGG - chr4_4:79488454-79488473 None:intergenic 30.0%
ATCTACTTATTTGTCAGTAC+TGG - chr4_4:79488455-79488474 None:intergenic 30.0%
! TAGGATGTTTGTTGGAAAAT+GGG - chr4_4:79488536-79488555 None:intergenic 30.0%
! TTAGGATGTTTGTTGGAAAA+TGG - chr4_4:79488537-79488556 None:intergenic 30.0%
TTATCGCAAAAAGCAGTATT+AGG - chr4_4:79488555-79488574 None:intergenic 30.0%
TGAAATGTACGTGATAGAAA+TGG - chr4_4:79488697-79488716 None:intergenic 30.0%
! AAATCATCATTTAGGCCTTT+TGG + chr4_4:79488759-79488778 Msa0706500:intron 30.0%
TCTTCATGTGATTCTCTATT+CGG + chr4_4:79488929-79488948 Msa0706500:CDS 30.0%
!!! TTTATTTTGCTGATGAAGCA+TGG + chr4_4:79489588-79489607 Msa0706500:intron 30.0%
AATCAGTGAACAAATGAAAG+AGG - chr4_4:79489619-79489638 None:intergenic 30.0%
!!! TCATTTGTTCACTGATTTTC+AGG + chr4_4:79489622-79489641 Msa0706500:intron 30.0%
AGAAAGGGAAAAAAATATGC+AGG + chr4_4:79489772-79489791 Msa0706500:intron 30.0%
TAACCATGATCCTATTTAAC+AGG + chr4_4:79489941-79489960 Msa0706500:intron 30.0%
AACCATGATCCTATTTAACA+GGG + chr4_4:79489942-79489961 Msa0706500:intron 30.0%
!! CCTCTAGTTTAGCTTTAAAA+AGG - chr4_4:79490140-79490159 None:intergenic 30.0%
!!! CCTTTTTAAAGCTAAACTAG+AGG + chr4_4:79490137-79490156 Msa0706500:CDS 30.0%
! TTTAAAGCTAAACTAGAGGT+TGG + chr4_4:79490141-79490160 Msa0706500:intron 30.0%
TACTTGAAGAAAAGGGAAAA+TGG + chr4_4:79490186-79490205 Msa0706500:intron 30.0%
ACTTGAAGAAAAGGGAAAAT+GGG + chr4_4:79490187-79490206 Msa0706500:intron 30.0%
!!! CTTGTTTTGGCATTTGATAT+TGG - chr4_4:79490394-79490413 None:intergenic 30.0%
CAATATCAAATGCCAAAACA+AGG + chr4_4:79490392-79490411 Msa0706500:CDS 30.0%
AAGATACCAACCTTTCAAAA+TGG - chr4_4:79490422-79490441 None:intergenic 30.0%
! GTAAAATGGCATTTCTGTTT+TGG + chr4_4:79490576-79490595 Msa0706500:intron 30.0%
AAATATTGGTGTGAAGAACA+TGG + chr4_4:79490694-79490713 Msa0706500:intron 30.0%
AACAAATTCAAGAGTTAGGT+TGG - chr4_4:79491176-79491195 None:intergenic 30.0%
TTGCAACAAATTCAAGAGTT+AGG - chr4_4:79491180-79491199 None:intergenic 30.0%
CATAGCATGTTTGAATTGTT+AGG - chr4_4:79491320-79491339 None:intergenic 30.0%
ACATGCTATGTAGTATCAAA+AGG + chr4_4:79491330-79491349 Msa0706500:intron 30.0%
CATGCTATGTAGTATCAAAA+GGG + chr4_4:79491331-79491350 Msa0706500:intron 30.0%
ATGCTATGTAGTATCAAAAG+GGG + chr4_4:79491332-79491351 Msa0706500:intron 30.0%
AGTGTGAAAGATGATTTGAA+TGG + chr4_4:79491828-79491847 Msa0706500:CDS 30.0%
! TGATTTGAATGGTCTTGATA+AGG + chr4_4:79491839-79491858 Msa0706500:CDS 30.0%
AAAAAAAAACAGCAGCTTTG+AGG - chr4_4:79492076-79492095 None:intergenic 30.0%
ATTTGAGGAGCTAATGTTAA+AGG - chr4_4:79492099-79492118 None:intergenic 30.0%
TTTAACATTAGCTCCTCAAA+TGG + chr4_4:79492098-79492117 Msa0706500:intron 30.0%
GCAAAAGCTGAAAATAACAA+GGG - chr4_4:79492358-79492377 None:intergenic 30.0%
AGCAAAAGCTGAAAATAACA+AGG - chr4_4:79492359-79492378 None:intergenic 30.0%
!!! TTGTTATTTTCAGCTTTTGC+TGG + chr4_4:79492358-79492377 Msa0706500:intron 30.0%
TTTGTATACCGATAGCATTT+AGG + chr4_4:79492413-79492432 Msa0706500:intron 30.0%
TGAACTTTCCTAAATGCTAT+CGG - chr4_4:79492424-79492443 None:intergenic 30.0%
TCTTATTGGATGAATAGAGT+CGG + chr4_4:79492601-79492620 Msa0706500:intron 30.0%
! ATGTATACCTTTAGTTTAGG+TGG - chr4_4:79492846-79492865 None:intergenic 30.0%
! AGCATGTATACCTTTAGTTT+AGG - chr4_4:79492849-79492868 None:intergenic 30.0%
! TAACATTTGAAGCTTTCCTA+AGG - chr4_4:79492980-79492999 None:intergenic 30.0%
AATGTTAGATGGCAATAGTA+AGG + chr4_4:79492993-79493012 Msa0706500:CDS 30.0%
GTTTCAATGTTATGGAAGTT+AGG - chr4_4:79493134-79493153 None:intergenic 30.0%
TAACAAGCGTTTCAATGTTA+TGG - chr4_4:79493142-79493161 None:intergenic 30.0%
! TGAAATCAATTGTTGTTGAC+TGG + chr4_4:79493179-79493198 Msa0706500:intron 30.0%
! GAAATCAATTGTTGTTGACT+GGG + chr4_4:79493180-79493199 Msa0706500:intron 30.0%
TATTATGATCTCCTTCAATC+AGG + chr4_4:79493226-79493245 Msa0706500:intron 30.0%
ACCTAAAGATGGTAATCTAT+CGG + chr4_4:79493256-79493275 Msa0706500:intron 30.0%
GATTATAAGAAACAAAGGGA+AGG - chr4_4:79493374-79493393 None:intergenic 30.0%
GTTCTATACAACTGTTAGAA+CGG - chr4_4:79493592-79493611 None:intergenic 30.0%
AGTTGTATAGAACATGCATT+GGG + chr4_4:79493599-79493618 Msa0706500:CDS 30.0%
ATCTCCAATATATCATTGAC+CGG + chr4_4:79493665-79493684 Msa0706500:CDS 30.0%
!!! TCCTATGCTATTTTTTTGAG+CGG + chr4_4:79493717-79493736 Msa0706500:intron 30.0%
AAACATCAAGTTTCTCCAAT+AGG - chr4_4:79493862-79493881 None:intergenic 30.0%
! GGCTTTATAAGCAGAATATT+TGG + chr4_4:79494052-79494071 Msa0706500:CDS 30.0%
AGCATATTTGATTCAGTGTT+TGG + chr4_4:79494078-79494097 Msa0706500:exon 30.0%
CATCTCATAATTCTCAACAA+AGG - chr4_4:79494145-79494164 None:intergenic 30.0%
AAAACTACAAAGGCAACTAT+TGG - chr4_4:79494349-79494368 None:intergenic 30.0%
!!! GCCTTTGTAGTTTTAATTGA+CGG + chr4_4:79494355-79494374 Msa0706500:three_prime_UTR 30.0%
!!! CCTTTGTAGTTTTAATTGAC+GGG + chr4_4:79494356-79494375 Msa0706500:three_prime_UTR 30.0%
!!! CTTTGTAGTTTTAATTGACG+GGG + chr4_4:79494357-79494376 Msa0706500:three_prime_UTR 30.0%
!!! TTTGTAGTTTTAATTGACGG+GGG + chr4_4:79494358-79494377 Msa0706500:three_prime_UTR 30.0%
AAACAAATTGCATCGGAATC+AGG + chr4_4:79486970-79486989 Msa0706500:five_prime_UTR 35.0%
!! CTTGATGATTTTCTGGATAC+CGG - chr4_4:79487053-79487072 None:intergenic 35.0%
AACTACAACAATGACAGATC+TGG - chr4_4:79487168-79487187 None:intergenic 35.0%
CAAACCAGTGATTGAGAATT+TGG - chr4_4:79487372-79487391 None:intergenic 35.0%
! TTTTACATTGACACTGTAGG+AGG + chr4_4:79487699-79487718 Msa0706500:intron 35.0%
TTTATACAACCTCCTCAATC+GGG - chr4_4:79487735-79487754 None:intergenic 35.0%
AGTGACATTAGACTCAGTTA+AGG - chr4_4:79487801-79487820 None:intergenic 35.0%
AGTCTAATGTCACTGAAGTA+AGG + chr4_4:79487807-79487826 Msa0706500:CDS 35.0%
TGAAATTGTGTTACCGAAGA+AGG + chr4_4:79487895-79487914 Msa0706500:intron 35.0%
TCTAACACTCTTTCCTTCTT+CGG - chr4_4:79487911-79487930 None:intergenic 35.0%
! TTTGGTTTCAATTGGCTGTT+AGG + chr4_4:79487939-79487958 Msa0706500:intron 35.0%
ATGTGTCCTCTTAAGACTTA+CGG + chr4_4:79487993-79488012 Msa0706500:intron 35.0%
GACTAGAGCTAAATAGTAGT+AGG + chr4_4:79488017-79488036 Msa0706500:intron 35.0%
AGCTAAATAGTAGTAGGCTA+GGG + chr4_4:79488023-79488042 Msa0706500:intron 35.0%
ACCTAAGAAAATGGAATCCA+TGG + chr4_4:79488156-79488175 Msa0706500:intron 35.0%
CCTAAGAAAATGGAATCCAT+GGG + chr4_4:79488157-79488176 Msa0706500:intron 35.0%
CTTAACAATCTACACTCTAC+AGG - chr4_4:79488196-79488215 None:intergenic 35.0%
! AGAGAAGATAACTTTAGGGA+GGG - chr4_4:79488494-79488513 None:intergenic 35.0%
GCAGAGAGAAGATAACTTTA+GGG - chr4_4:79488498-79488517 None:intergenic 35.0%
AGCAGTATTAGGATGTTTGT+TGG - chr4_4:79488544-79488563 None:intergenic 35.0%
TCTAAGAGTTCAAAGCTGAA+TGG + chr4_4:79488598-79488617 Msa0706500:intron 35.0%
ATGATGATTTCGTATCAAGG+CGG - chr4_4:79488749-79488768 None:intergenic 35.0%
AGGAAAAAGGACAAACCAAA+AGG - chr4_4:79488777-79488796 None:intergenic 35.0%
TATCTACACATGCTTAACAG+TGG + chr4_4:79488878-79488897 Msa0706500:intron 35.0%
TAGATTCGTTGAGATGCATT+TGG - chr4_4:79489005-79489024 None:intergenic 35.0%
TCTCAACGAATCTATCTGAT+TGG + chr4_4:79489011-79489030 Msa0706500:CDS 35.0%
AACGAATCTATCTGATTGGT+AGG + chr4_4:79489015-79489034 Msa0706500:CDS 35.0%
TATTACCAAAAGAGAGGAGT+GGG - chr4_4:79489250-79489269 None:intergenic 35.0%
ATATTACCAAAAGAGAGGAG+TGG - chr4_4:79489251-79489270 None:intergenic 35.0%
! TTGTTGGATTTGTTCCTTTC+CGG + chr4_4:79489356-79489375 Msa0706500:intron 35.0%
TGTATCAGATTATACCGGAA+AGG - chr4_4:79489373-79489392 None:intergenic 35.0%
TGCTCTGTATCAGATTATAC+CGG - chr4_4:79489378-79489397 None:intergenic 35.0%
CATGTAATGCTCTGTATCAA+AGG - chr4_4:79489416-79489435 None:intergenic 35.0%
!! TAAAGCACTTCAAAAGTGCT+AGG + chr4_4:79489708-79489727 Msa0706500:CDS 35.0%
TCATGGTTAAAAACTCGACA+GGG - chr4_4:79489930-79489949 None:intergenic 35.0%
ATCATGGTTAAAAACTCGAC+AGG - chr4_4:79489931-79489950 None:intergenic 35.0%
GTTAGGGAAATATGGAGATT+TGG + chr4_4:79489978-79489997 Msa0706500:CDS 35.0%
AGATACTGCCTTCACAAAAT+TGG + chr4_4:79490051-79490070 Msa0706500:CDS 35.0%
ACTACTAAACATTGGCGATA+TGG + chr4_4:79490098-79490117 Msa0706500:CDS 35.0%
!! GCTTTAAAAAGGTCTAATGC+AGG - chr4_4:79490129-79490148 None:intergenic 35.0%
GATAACTTAGTGTTTGTACC+AGG + chr4_4:79490297-79490316 Msa0706500:intron 35.0%
CTTCCATGACAGAATTTCAT+TGG + chr4_4:79490353-79490372 Msa0706500:CDS 35.0%
AAGCCAATGAAATTCTGTCA+TGG - chr4_4:79490359-79490378 None:intergenic 35.0%
! ATGACAGAATTTCATTGGCT+TGG + chr4_4:79490358-79490377 Msa0706500:CDS 35.0%
!!! GAAATGCCATTTTACAGCAT+GGG - chr4_4:79490571-79490590 None:intergenic 35.0%
!!! AGAAATGCCATTTTACAGCA+TGG - chr4_4:79490572-79490591 None:intergenic 35.0%
ATGTTCTTCACACCAATAGA+GGG - chr4_4:79490725-79490744 None:intergenic 35.0%
ACAAATATTTCTCTGATCCC+TGG + chr4_4:79490819-79490838 Msa0706500:intron 35.0%
AAGTAAAATCCACTAGTCCA+GGG - chr4_4:79490839-79490858 None:intergenic 35.0%
!! AGTGGATTTTACTTCTGACT+TGG + chr4_4:79490845-79490864 Msa0706500:intron 35.0%
!! TAACACCAAAAGGAGCATTA+TGG - chr4_4:79490888-79490907 None:intergenic 35.0%
TTGCAACAAATTCAAGAGCT+AGG - chr4_4:79491040-79491059 None:intergenic 35.0%
! CTGAATAATTTTATCAGCCC+AGG + chr4_4:79491564-79491583 Msa0706500:intron 35.0%
! GCTGAAATATTTTCTGCCAA+GGG - chr4_4:79491613-79491632 None:intergenic 35.0%
CTTGGCAGAAAATATTTCAG+CGG + chr4_4:79491612-79491631 Msa0706500:CDS 35.0%
CTTATATGATCTCTTGCTAC+AGG + chr4_4:79491992-79492011 Msa0706500:CDS 35.0%
GCAAGTTCACAAACAAAACA+TGG - chr4_4:79492025-79492044 None:intergenic 35.0%
CTATCTGATTTAGTCAGTTC+TGG + chr4_4:79492167-79492186 Msa0706500:CDS 35.0%
!! TGATTTAGTCAGTTCTGGAA+GGG + chr4_4:79492172-79492191 Msa0706500:CDS 35.0%
! AGAGTGTTCATGCAAAAGTT+TGG + chr4_4:79492226-79492245 Msa0706500:CDS 35.0%
TCCATAAATTCTACCGTGAT+GGG - chr4_4:79492558-79492577 None:intergenic 35.0%
TTCCATAAATTCTACCGTGA+TGG - chr4_4:79492559-79492578 None:intergenic 35.0%
TCACGGTAGAATTTATGGAA+AGG + chr4_4:79492559-79492578 Msa0706500:intron 35.0%
CTTATTGGATGAATAGAGTC+GGG + chr4_4:79492602-79492621 Msa0706500:intron 35.0%
GTCGGGAATAAATGTTATAG+TGG + chr4_4:79492619-79492638 Msa0706500:intron 35.0%
! AAGTTTTTCTCTCCTCTCAT+AGG + chr4_4:79492724-79492743 Msa0706500:intron 35.0%
! AGTTTTTCTCTCCTCTCATA+GGG + chr4_4:79492725-79492744 Msa0706500:intron 35.0%
AGTATAACCACATCTGTTTC+TGG + chr4_4:79492803-79492822 Msa0706500:intron 35.0%
TTAAAGTCCAGAAACAGATG+TGG - chr4_4:79492813-79492832 None:intergenic 35.0%
GATGTTTCCACCTAAACTAA+AGG + chr4_4:79492836-79492855 Msa0706500:intron 35.0%
GGAAAGCTTCAAATGTTAGA+TGG + chr4_4:79492982-79493001 Msa0706500:CDS 35.0%
CAATGTTATGGAAGTTAGGA+TGG - chr4_4:79493130-79493149 None:intergenic 35.0%
TTGATTTCACACTCAACTTC+AGG - chr4_4:79493168-79493187 None:intergenic 35.0%
ATTACCATCTTTAGGTCTAC+AGG - chr4_4:79493252-79493271 None:intergenic 35.0%
CCTAAAGATGGTAATCTATC+GGG + chr4_4:79493257-79493276 Msa0706500:intron 35.0%
CATAGTCTGCCAAATTGAAA+AGG - chr4_4:79493537-79493556 None:intergenic 35.0%
! CTTTTCAATTTGGCAGACTA+TGG + chr4_4:79493535-79493554 Msa0706500:intron 35.0%
GACTATGGTGAAAGAATTAG+AGG + chr4_4:79493550-79493569 Msa0706500:intron 35.0%
CAGTTGTATAGAACATGCAT+TGG + chr4_4:79493598-79493617 Msa0706500:CDS 35.0%
GTTGTATAGAACATGCATTG+GGG + chr4_4:79493600-79493619 Msa0706500:CDS 35.0%
TGATATATTGGAGATCCCTT+CGG - chr4_4:79493660-79493679 None:intergenic 35.0%
!!! CCTATGCTATTTTTTTGAGC+GGG + chr4_4:79493718-79493737 Msa0706500:intron 35.0%
GTAATCCTATCTGTTTCAGT+TGG + chr4_4:79493829-79493848 Msa0706500:intron 35.0%
TTTCTCCAACTGAAACAGAT+AGG - chr4_4:79493837-79493856 None:intergenic 35.0%
TCAGTTGGAGAAATTCCTAT+TGG + chr4_4:79493844-79493863 Msa0706500:intron 35.0%
ATTCGATAGTGTTATACGCA+AGG - chr4_4:79493985-79494004 None:intergenic 35.0%
AAGAAGGACAAAAGAGCAAA+GGG + chr4_4:79494028-79494047 Msa0706500:CDS 35.0%
! TTGAGTTGCCTAGAGATATT+TGG + chr4_4:79494176-79494195 Msa0706500:three_prime_UTR 35.0%
CCCGTCAATTAAAACTACAA+AGG - chr4_4:79494359-79494378 None:intergenic 35.0%
CGGTATCCAGAAAATCATCA+AGG + chr4_4:79487051-79487070 Msa0706500:five_prime_UTR 40.0%
AGAGAATCAATCATCTGCCA+TGG + chr4_4:79487304-79487323 Msa0706500:CDS 40.0%
GGGAACAATCTGATCAGAAT+TGG - chr4_4:79487351-79487370 None:intergenic 40.0%
GTTCCCAAATTCTCAATCAC+TGG + chr4_4:79487365-79487384 Msa0706500:CDS 40.0%
AAATCAGCACAAATGCAGCA+TGG + chr4_4:79487530-79487549 Msa0706500:CDS 40.0%
! GTATTTTCGCTGTTGCTAAC+TGG + chr4_4:79487587-79487606 Msa0706500:intron 40.0%
TGCATCAGAAAAGAGAGATG+CGG - chr4_4:79487846-79487865 None:intergenic 40.0%
TAGTCACCGTAAGTCTTAAG+AGG - chr4_4:79488002-79488021 None:intergenic 40.0%
GAGCTAAATAGTAGTAGGCT+AGG + chr4_4:79488022-79488041 Msa0706500:intron 40.0%
ATTGCAAAGCACACGTTTGT+GGG - chr4_4:79488057-79488076 None:intergenic 40.0%
AATCGTGGCACCTAAGAAAA+TGG + chr4_4:79488147-79488166 Msa0706500:intron 40.0%
! CCCATGGATTCCATTTTCTT+AGG - chr4_4:79488160-79488179 None:intergenic 40.0%
AAAATGGAATCCATGGGAAG+CGG + chr4_4:79488163-79488182 Msa0706500:intron 40.0%
!! CAGTACTGGGCTTTTATACT+TGG - chr4_4:79488441-79488460 None:intergenic 40.0%
! GAGAGAAGATAACTTTAGGG+AGG - chr4_4:79488495-79488514 None:intergenic 40.0%
GGCAGAGAGAAGATAACTTT+AGG - chr4_4:79488499-79488518 None:intergenic 40.0%
TGGAAAATGGGTAAAGAGTG+TGG - chr4_4:79488524-79488543 None:intergenic 40.0%
!!! TTTTTGCGATAAGCACTGGT+AGG + chr4_4:79488563-79488582 Msa0706500:intron 40.0%
AAGAGTTCAAAGCTGAATGG+TGG + chr4_4:79488601-79488620 Msa0706500:intron 40.0%
TGATGATTTCGTATCAAGGC+GGG - chr4_4:79488748-79488767 None:intergenic 40.0%
CACATGCTTAACAGTGGAAT+TGG + chr4_4:79488884-79488903 Msa0706500:intron 40.0%
TCATGTGATTCTCTATTCGG+CGG + chr4_4:79488932-79488951 Msa0706500:CDS 40.0%
TGAGATGCATTTGGTCCATT+TGG - chr4_4:79488996-79489015 None:intergenic 40.0%
! TTCACAATTTTGTGCGGTCA+AGG + chr4_4:79489070-79489089 Msa0706500:CDS 40.0%
! GTATTGCAACAAAAGGCATG+TGG + chr4_4:79489138-79489157 Msa0706500:intron 40.0%
! TATTTCCCACTCCTCTCTTT+TGG + chr4_4:79489242-79489261 Msa0706500:intron 40.0%
!! GATACAGAGCATTGCATGTT+AGG + chr4_4:79489387-79489406 Msa0706500:intron 40.0%
GCTTACGAGTCCTATATGAA+GGG + chr4_4:79489644-79489663 Msa0706500:CDS 40.0%
CTTACGAGTCCTATATGAAG+GGG + chr4_4:79489645-79489664 Msa0706500:CDS 40.0%
CAACAAACTCCCCTTCATAT+AGG - chr4_4:79489657-79489676 None:intergenic 40.0%
TGTTTGAGCAAGATCAGAAC+TGG + chr4_4:79489675-79489694 Msa0706500:CDS 40.0%
GTTTGAGCAAGATCAGAACT+GGG + chr4_4:79489676-79489695 Msa0706500:CDS 40.0%
AGCCCTGTTAAATAGGATCA+TGG - chr4_4:79489947-79489966 None:intergenic 40.0%
CGTATACAGCCCTGTTAAAT+AGG - chr4_4:79489954-79489973 None:intergenic 40.0%
ATTTAACAGGGCTGTATACG+AGG + chr4_4:79489954-79489973 Msa0706500:intron 40.0%
TACGAGGAGTTAGGGAAATA+TGG + chr4_4:79489970-79489989 Msa0706500:CDS 40.0%
TGAAGGCAGTATCTGATACT+AGG - chr4_4:79490045-79490064 None:intergenic 40.0%
!! TTGACTGGCCAATTTTGTGA+AGG - chr4_4:79490062-79490081 None:intergenic 40.0%
GCCTCTGAACTACTAAACAT+TGG + chr4_4:79490090-79490109 Msa0706500:CDS 40.0%
GCCAATGTTTAGTAGTTCAG+AGG - chr4_4:79490094-79490113 None:intergenic 40.0%
CTAAACATTGGCGATATGGA+AGG + chr4_4:79490102-79490121 Msa0706500:CDS 40.0%
!! CAAAATGGCAACCCTTGTTT+TGG - chr4_4:79490407-79490426 None:intergenic 40.0%
!!! ACAAGGGTTGCCATTTTGAA+AGG + chr4_4:79490409-79490428 Msa0706500:CDS 40.0%
ACGTGTATGTAACCACCTAA+TGG + chr4_4:79490536-79490555 Msa0706500:intron 40.0%
! CTTTTGCCCATGCTGTAAAA+TGG + chr4_4:79490562-79490581 Msa0706500:intron 40.0%
TGTTCTTCACACCAATAGAG+GGG - chr4_4:79490724-79490743 None:intergenic 40.0%
CATGTTCTTCACACCAATAG+AGG - chr4_4:79490726-79490745 None:intergenic 40.0%
ATCTGCTGAACATAACTCGT+TGG + chr4_4:79490774-79490793 Msa0706500:intron 40.0%
TCTGCTGAACATAACTCGTT+GGG + chr4_4:79490775-79490794 Msa0706500:intron 40.0%
CTCGTTGGGGTAATATAGTT+TGG + chr4_4:79490789-79490808 Msa0706500:intron 40.0%
GAAGTAAAATCCACTAGTCC+AGG - chr4_4:79490840-79490859 None:intergenic 40.0%
GCATTATGGATGTCAACCTA+GGG - chr4_4:79490874-79490893 None:intergenic 40.0%
AGCATTATGGATGTCAACCT+AGG - chr4_4:79490875-79490894 None:intergenic 40.0%
! GACATCCATAATGCTCCTTT+TGG + chr4_4:79490880-79490899 Msa0706500:intron 40.0%
ATCAAAAGGGGAATTGTTGC+TGG + chr4_4:79491344-79491363 Msa0706500:intron 40.0%
! CGCTGAAATATTTTCTGCCA+AGG - chr4_4:79491614-79491633 None:intergenic 40.0%
TATTTCAGCGGACAAAAGAC+TGG + chr4_4:79491624-79491643 Msa0706500:CDS 40.0%
ATGATGCTAGAGGCTGTATT+CGG + chr4_4:79491677-79491696 Msa0706500:CDS 40.0%
!! TATTCGGGCTGATTTGGTAT+TGG + chr4_4:79491693-79491712 Msa0706500:intron 40.0%
TATAAGCGAACAAGCTCTTC+AGG - chr4_4:79491978-79491997 None:intergenic 40.0%
!! CTGATTTAGTCAGTTCTGGA+AGG + chr4_4:79492171-79492190 Msa0706500:CDS 40.0%
!!! AGCTAACTTCTTCTGGCTTT+TGG - chr4_4:79492199-79492218 None:intergenic 40.0%
TCAGCAAAGCTAACTTCTTC+TGG - chr4_4:79492206-79492225 None:intergenic 40.0%
!! GAAGGGATATCTCTAAGATC+AGG - chr4_4:79492293-79492312 None:intergenic 40.0%
TGATGGGAGCTTTACATACT+AGG - chr4_4:79492542-79492561 None:intergenic 40.0%
AGTATGTAAAGCTCCCATCA+CGG + chr4_4:79492542-79492561 Msa0706500:intron 40.0%
TCCCATCACGGTAGAATTTA+TGG + chr4_4:79492554-79492573 Msa0706500:intron 40.0%
CCAATAAGAGATGACACACT+GGG - chr4_4:79492590-79492609 None:intergenic 40.0%
TCCAATAAGAGATGACACAC+TGG - chr4_4:79492591-79492610 None:intergenic 40.0%
TCTTGCTTTCGCAAACATCA+AGG - chr4_4:79492702-79492721 None:intergenic 40.0%
CATGCTTATGACTTATGTGC+AGG + chr4_4:79492863-79492882 Msa0706500:intron 40.0%
TGTTGCAAAGTCATACAGTG+TGG + chr4_4:79492894-79492913 Msa0706500:CDS 40.0%
AGTTTAGCTGAAGATGCCTT+AGG + chr4_4:79492961-79492980 Msa0706500:CDS 40.0%
! ATCAATTGTTGTTGACTGGG+AGG + chr4_4:79493183-79493202 Msa0706500:intron 40.0%
GACTGGGAGGAACTAAATAA+AGG + chr4_4:79493196-79493215 Msa0706500:intron 40.0%
CCCGATAGATTACCATCTTT+AGG - chr4_4:79493260-79493279 None:intergenic 40.0%
!! TGTGCAGACTCTAAAGTTGT+TGG - chr4_4:79493325-79493344 None:intergenic 40.0%
! TGCACAGTGTTTTCGTGATA+TGG + chr4_4:79493339-79493358 Msa0706500:intron 40.0%
ACTCAAGAGAATATCTCCGA+AGG + chr4_4:79493641-79493660 Msa0706500:CDS 40.0%
CTCAAGAGAATATCTCCGAA+GGG + chr4_4:79493642-79493661 Msa0706500:CDS 40.0%
AGCTCCGGTCAATGATATAT+TGG - chr4_4:79493672-79493691 None:intergenic 40.0%
CCCGCTCAAAAAAATAGCAT+AGG - chr4_4:79493721-79493740 None:intergenic 40.0%
TGATGTTTATGAGTCTGCTG+TGG + chr4_4:79493874-79493893 Msa0706500:CDS 40.0%
GATGTTTATGAGTCTGCTGT+GGG + chr4_4:79493875-79493894 Msa0706500:CDS 40.0%
GAAGAAGGACAAAAGAGCAA+AGG + chr4_4:79494027-79494046 Msa0706500:CDS 40.0%
ATTTCTTGAAACCGATGACG+CGG + chr4_4:79494116-79494135 Msa0706500:three_prime_UTR 40.0%
ATCGGAATCAGGACACAACT+CGG + chr4_4:79486981-79487000 Msa0706500:five_prime_UTR 45.0%
!! TTTCGGATCATCGACTTCCA+TGG - chr4_4:79487324-79487343 None:intergenic 45.0%
ACGGAGATTACACTCGCTAT+CGG + chr4_4:79487561-79487580 Msa0706500:CDS 45.0%
GATTGCAAAGCACACGTTTG+TGG - chr4_4:79488058-79488077 None:intergenic 45.0%
GCGACAGTTATAAGCATGAG+TGG + chr4_4:79488103-79488122 Msa0706500:intron 45.0%
GTTCACAGTCCATGTAATCG+TGG + chr4_4:79488132-79488151 Msa0706500:intron 45.0%
! TCTTAGGTGCCACGATTACA+TGG - chr4_4:79488144-79488163 None:intergenic 45.0%
!! ATAGGCGCTGATATCATAGC+AGG - chr4_4:79488242-79488261 None:intergenic 45.0%
TGGTCCAATGGATCTTGGAT+AGG - chr4_4:79488260-79488279 None:intergenic 45.0%
TGCTATCAGCTCACCACTAT+CGG + chr4_4:79488282-79488301 Msa0706500:intron 45.0%
! GGTCTTGTCTCATCCAATGT+GGG - chr4_4:79488370-79488389 None:intergenic 45.0%
! AGGTCTTGTCTCATCCAATG+TGG - chr4_4:79488371-79488390 None:intergenic 45.0%
CAGCATACAAACACATCGTC+AGG - chr4_4:79488391-79488410 None:intergenic 45.0%
GACGATGTGTTTGTATGCTG+TGG + chr4_4:79488391-79488410 Msa0706500:intron 45.0%
CAGTCCTCACCCTATAGATT+AGG + chr4_4:79488415-79488434 Msa0706500:intron 45.0%
TTGGCCTAATCTATAGGGTG+AGG - chr4_4:79488422-79488441 None:intergenic 45.0%
! AAATGGGTAAAGAGTGTGGC+AGG - chr4_4:79488520-79488539 None:intergenic 45.0%
!!! CTGCTTTTTGCGATAAGCAC+TGG + chr4_4:79488559-79488578 Msa0706500:intron 45.0%
GAGAAAAGGCAGCTTCCAAA+TGG + chr4_4:79488978-79488997 Msa0706500:CDS 45.0%
!! GGCAGATTCTAGGACATCTT+TGG + chr4_4:79489091-79489110 Msa0706500:CDS 45.0%
! TAGGACATCTTTGGAAGCTG+AGG + chr4_4:79489100-79489119 Msa0706500:CDS 45.0%
! AACAAAAGGCATGTGGCAAC+TGG + chr4_4:79489145-79489164 Msa0706500:intron 45.0%
GGCTTACGAGTCCTATATGA+AGG + chr4_4:79489643-79489662 Msa0706500:intron 45.0%
TGCAGGAACAAGCTTATGCT+TGG + chr4_4:79489789-79489808 Msa0706500:intron 45.0%
!! ACCAAGTTTTGTGTCGTGAG+CGG + chr4_4:79490004-79490023 Msa0706500:CDS 45.0%
CAGAGGCTTGTAGATTTGAC+TGG - chr4_4:79490077-79490096 None:intergenic 45.0%
!!! GGGTTGCCATTTTGAAAGGT+TGG + chr4_4:79490413-79490432 Msa0706500:intron 45.0%
GTTACATACACGTGAGGCAA+AGG - chr4_4:79490529-79490548 None:intergenic 45.0%
TAGGTGGTTACATACACGTG+AGG - chr4_4:79490535-79490554 None:intergenic 45.0%
CATGGGCAAAAGAGACCATT+AGG - chr4_4:79490554-79490573 None:intergenic 45.0%
CTGCTGAACATAACTCGTTG+GGG + chr4_4:79490776-79490795 Msa0706500:intron 45.0%
!! ACTTCTGACTTGGATACCCT+AGG + chr4_4:79490855-79490874 Msa0706500:intron 45.0%
! AATTTTATCAGCCCAGGAGC+TGG + chr4_4:79491570-79491589 Msa0706500:intron 45.0%
GATATCTTTCTCCAGCTCCT+GGG - chr4_4:79491584-79491603 None:intergenic 45.0%
GAGCTGGAGAAAGATATCCA+TGG + chr4_4:79491586-79491605 Msa0706500:CDS 45.0%
GAAAGATATCCATGGTCCCT+TGG + chr4_4:79491594-79491613 Msa0706500:CDS 45.0%
! TATTTTCTGCCAAGGGACCA+TGG - chr4_4:79491606-79491625 None:intergenic 45.0%
TCTGCATACCATGATGCTAG+AGG + chr4_4:79491667-79491686 Msa0706500:CDS 45.0%
GAATACAGCCTCTAGCATCA+TGG - chr4_4:79491678-79491697 None:intergenic 45.0%
TGATGCTAGAGGCTGTATTC+GGG + chr4_4:79491678-79491697 Msa0706500:CDS 45.0%
ACTTTCTGCATTTCCTGCAG+TGG - chr4_4:79491811-79491830 None:intergenic 45.0%
CAACAAAAGGTTGCGCTCAA+TGG - chr4_4:79491892-79491911 None:intergenic 45.0%
! CATTGAGCGCAACCTTTTGT+TGG + chr4_4:79491890-79491909 Msa0706500:CDS 45.0%
TTGCAACCCTGACCAACAAA+AGG - chr4_4:79491905-79491924 None:intergenic 45.0%
!!! GTTTGGCTTTTCGAGCAGAA+AGG + chr4_4:79492243-79492262 Msa0706500:CDS 45.0%
CATGCATGTGCAGTGCAATT+AGG - chr4_4:79492331-79492350 None:intergenic 45.0%
CCCAGTGTGTCATCTCTTAT+TGG + chr4_4:79492587-79492606 Msa0706500:intron 45.0%
TGCTCAATTGCCCTTTCCTA+GGG - chr4_4:79492752-79492771 None:intergenic 45.0%
ATACAGTGTGGCTGGAAAGA+GGG + chr4_4:79492906-79492925 Msa0706500:CDS 45.0%
AAGATCTCCTCTGATCTGTC+AGG - chr4_4:79493283-79493302 None:intergenic 45.0%
AGAACATGCATTGGGGATCA+TGG + chr4_4:79493607-79493626 Msa0706500:CDS 45.0%
AAGGACAAAAGAGCAAAGGG+TGG + chr4_4:79494031-79494050 Msa0706500:CDS 45.0%
TTTCTTGAAACCGATGACGC+GGG + chr4_4:79494117-79494136 Msa0706500:three_prime_UTR 45.0%
TTAATTGACGGGGGATAGCA+TGG + chr4_4:79494367-79494386 Msa0706500:three_prime_UTR 45.0%
TAATTGACGGGGGATAGCAT+GGG + chr4_4:79494368-79494387 Msa0706500:three_prime_UTR 45.0%
!! TAATAATATATTTCTTAATA+TGG + chr4_4:79491093-79491112 Msa0706500:intron 5.0%
!!! ATATTTTCATAAATTATATT+TGG + chr4_4:79494267-79494286 Msa0706500:three_prime_UTR 5.0%
!! CAAAAAATATATATATATAA+AGG - chr4_4:79494323-79494342 None:intergenic 5.0%
!!! CTTTATATATATATATTTTT+TGG + chr4_4:79494321-79494340 Msa0706500:three_prime_UTR 5.0%
ATCAGGACACAACTCGGAGT+CGG + chr4_4:79486987-79487006 Msa0706500:five_prime_UTR 50.0%
GTCAAATTCCGCTGCGATTC+CGG - chr4_4:79487029-79487048 None:intergenic 50.0%
GCAATTGCGAAATCGCGTAG+GGG - chr4_4:79487102-79487121 None:intergenic 50.0%
CGCAATTGCGAAATCGCGTA+GGG - chr4_4:79487103-79487122 None:intergenic 50.0%
! ATGCAGCATGGTTTGCGTCA+CGG + chr4_4:79487542-79487561 Msa0706500:CDS 50.0%
TCGCTGTTGCTAACTGGATG+CGG + chr4_4:79487593-79487612 Msa0706500:intron 50.0%
GGTATTGTACAGCCCGATTG+AGG + chr4_4:79487720-79487739 Msa0706500:CDS 50.0%
ATTGTACAGCCCGATTGAGG+AGG + chr4_4:79487723-79487742 Msa0706500:CDS 50.0%
TTGAAGTTTACCCACGGTCG+TGG + chr4_4:79487758-79487777 Msa0706500:CDS 50.0%
AGCGCCTATCCAAGATCCAT+TGG + chr4_4:79488253-79488272 Msa0706500:intron 50.0%
! GATAGTGGTGAGCTGATAGC+AGG - chr4_4:79488283-79488302 None:intergenic 50.0%
GCTATCAGCTCACCACTATC+GGG + chr4_4:79488283-79488302 Msa0706500:intron 50.0%
ACACGCCTGATGTGAAGTCT+TGG + chr4_4:79488317-79488336 Msa0706500:intron 50.0%
CACGCCTGATGTGAAGTCTT+GGG + chr4_4:79488318-79488337 Msa0706500:intron 50.0%
CATGCCCAAGACTTCACATC+AGG - chr4_4:79488325-79488344 None:intergenic 50.0%
GATGTGAAGTCTTGGGCATG+AGG + chr4_4:79488325-79488344 Msa0706500:intron 50.0%
! CTTTAGGGAGGGTGATAGAC+AGG - chr4_4:79488483-79488502 None:intergenic 50.0%
GGAGTCATGCCATGGAGAAA+AGG + chr4_4:79488964-79488983 Msa0706500:CDS 50.0%
! TGGAAGCTGCCTTTTCTCCA+TGG - chr4_4:79488976-79488995 None:intergenic 50.0%
TCTGATTGGTAGGTTGCGCA+AGG + chr4_4:79489025-79489044 Msa0706500:CDS 50.0%
GTTGCGCAAGGCAGTAAAGT+GGG + chr4_4:79489037-79489056 Msa0706500:CDS 50.0%
GCAAGATCAGAACTGGGATG+TGG + chr4_4:79489682-79489701 Msa0706500:CDS 50.0%
AGGGCTGTATACGAGGAGTT+AGG + chr4_4:79489961-79489980 Msa0706500:intron 50.0%
GGGCTGTATACGAGGAGTTA+GGG + chr4_4:79489962-79489981 Msa0706500:intron 50.0%
!! CCAAGTTTTGTGTCGTGAGC+GGG + chr4_4:79490005-79490024 Msa0706500:CDS 50.0%
TTGAGATCTTGCCTCAGCCA+TGG - chr4_4:79490326-79490345 None:intergenic 50.0%
GGGCAAAAGAGACCATTAGG+TGG - chr4_4:79490551-79490570 None:intergenic 50.0%
AACATGGTGTGCCCCTCTAT+TGG + chr4_4:79490710-79490729 Msa0706500:intron 50.0%
! TTCTCTGATCCCTGGACTAG+TGG + chr4_4:79490827-79490846 Msa0706500:intron 50.0%
CATGTGGATGTCAGAGCCAA+AGG + chr4_4:79490994-79491013 Msa0706500:intron 50.0%
CATGTCGATGTCAGAGCCAA+AGG + chr4_4:79491132-79491151 Msa0706500:intron 50.0%
GGATATCTTTCTCCAGCTCC+TGG - chr4_4:79491585-79491604 None:intergenic 50.0%
AGGCTGTATTCGGGCTGATT+TGG + chr4_4:79491687-79491706 Msa0706500:CDS 50.0%
! TGTGCATTTTAGGCCACTGC+AGG + chr4_4:79491795-79491814 Msa0706500:intron 50.0%
AAGGCTGTCAGTGCTGTCTT+AGG + chr4_4:79491858-79491877 Msa0706500:CDS 50.0%
! AGCGCAACCTTTTGTTGGTC+AGG + chr4_4:79491895-79491914 Msa0706500:CDS 50.0%
! GCGCAACCTTTTGTTGGTCA+GGG + chr4_4:79491896-79491915 Msa0706500:CDS 50.0%
! GCGAACAAGCTCTTCAGGTT+TGG - chr4_4:79491973-79491992 None:intergenic 50.0%
GAGCAGAAAGGTTGTCTTGC+TGG + chr4_4:79492255-79492274 Msa0706500:intron 50.0%
GCTCAATTGCCCTTTCCTAG+GGG - chr4_4:79492751-79492770 None:intergenic 50.0%
CTGCTCAATTGCCCTTTCCT+AGG - chr4_4:79492753-79492772 None:intergenic 50.0%
GGAAAGGGCAATTGAGCAGT+AGG + chr4_4:79492754-79492773 Msa0706500:intron 50.0%
AAGGGCAATTGAGCAGTAGG+TGG + chr4_4:79492757-79492776 Msa0706500:intron 50.0%
GCAGTAGGTGGTGATTACTG+TGG + chr4_4:79492769-79492788 Msa0706500:intron 50.0%
GATGTGGTTATACTGCCAGC+AGG - chr4_4:79492797-79492816 None:intergenic 50.0%
GCAAAGTCATACAGTGTGGC+TGG + chr4_4:79492898-79492917 Msa0706500:CDS 50.0%
CATACAGTGTGGCTGGAAAG+AGG + chr4_4:79492905-79492924 Msa0706500:CDS 50.0%
AGGTCTACAGGCCTGATTGA+AGG - chr4_4:79493240-79493259 None:intergenic 50.0%
CAGGCCTGTAGACCTAAAGA+TGG + chr4_4:79493245-79493264 Msa0706500:intron 50.0%
ACATGCATTGGGGATCATGG+AGG + chr4_4:79493610-79493629 Msa0706500:CDS 50.0%
TATCATTGACCGGAGCTGAG+CGG + chr4_4:79493675-79493694 Msa0706500:CDS 50.0%
ATTATGTACCCGCTCAGCTC+CGG - chr4_4:79493687-79493706 None:intergenic 50.0%
TACGCAAGGTCCAGCACAAT+CGG - chr4_4:79493971-79493990 None:intergenic 50.0%
AACAAAGGAACCCGCGTCAT+CGG - chr4_4:79494130-79494149 None:intergenic 50.0%
AATTGACGGGGGATAGCATG+GGG + chr4_4:79494369-79494388 Msa0706500:three_prime_UTR 50.0%
CGGAAGTGAACTGAACTCGC+CGG + chr4_4:79487007-79487026 Msa0706500:five_prime_UTR 55.0%
ATCGCAGCGGAATTTGACGC+CGG + chr4_4:79487031-79487050 Msa0706500:five_prime_UTR 55.0%
TGCGAAATCGCGTAGGGGAA+GGG - chr4_4:79487097-79487116 None:intergenic 55.0%
TTGCGAAATCGCGTAGGGGA+AGG - chr4_4:79487098-79487117 None:intergenic 55.0%
GCGCAATTGCGAAATCGCGT+AGG - chr4_4:79487104-79487123 None:intergenic 55.0%
CGTATACTTGCCACGACCGT+GGG - chr4_4:79487771-79487790 None:intergenic 55.0%
TCGTATACTTGCCACGACCG+TGG - chr4_4:79487772-79487791 None:intergenic 55.0%
GCAGGTGGTCCAATGGATCT+TGG - chr4_4:79488265-79488284 None:intergenic 55.0%
GCTGATAGCAGGTGGTCCAA+TGG - chr4_4:79488272-79488291 None:intergenic 55.0%
AGTGGTGAGCTGATAGCAGG+TGG - chr4_4:79488280-79488299 None:intergenic 55.0%
GTGGCTCAAGAGCGAGAACA+GGG - chr4_4:79488660-79488679 None:intergenic 55.0%
AGTGGCTCAAGAGCGAGAAC+AGG - chr4_4:79488661-79488680 None:intergenic 55.0%
TCTATTCGGCGGAGAGAGCT+TGG + chr4_4:79488943-79488962 Msa0706500:CDS 55.0%
GAGAGCTTGGAGTCATGCCA+TGG + chr4_4:79488956-79488975 Msa0706500:CDS 55.0%
GGTTGCGCAAGGCAGTAAAG+TGG + chr4_4:79489036-79489055 Msa0706500:CDS 55.0%
GTGCGGTCAAGGCAGATTCT+AGG + chr4_4:79489081-79489100 Msa0706500:CDS 55.0%
CCCGCTCACGACACAAAACT+TGG - chr4_4:79490008-79490027 None:intergenic 55.0%
!! TTTGTGTCGTGAGCGGGTTG+AGG + chr4_4:79490011-79490030 Msa0706500:CDS 55.0%
GTGTTTGTACCAGGCTGCCA+TGG + chr4_4:79490306-79490325 Msa0706500:intron 55.0%
ACACGTGAGGCAAAGGTGAG+AGG - chr4_4:79490522-79490541 None:intergenic 55.0%
TTTCCTAGGGGCCCTATGAG+AGG - chr4_4:79492739-79492758 None:intergenic 55.0%
TCTCATAGGGCCCCTAGGAA+AGG + chr4_4:79492738-79492757 Msa0706500:intron 55.0%
CTCATAGGGCCCCTAGGAAA+GGG + chr4_4:79492739-79492758 Msa0706500:intron 55.0%
GTGATTACTGTGGTGCCTGC+TGG + chr4_4:79492779-79492798 Msa0706500:intron 55.0%
TATCGGGCCTGACAGATCAG+AGG + chr4_4:79493273-79493292 Msa0706500:intron 55.0%
TGGGGATCATGGAGGAGAAG+AGG + chr4_4:79493618-79493637 Msa0706500:CDS 55.0%
ATCATTGACCGGAGCTGAGC+GGG + chr4_4:79493676-79493695 Msa0706500:CDS 55.0%
CAATTGCCTGGAAAGCTGGG+GGG - chr4_4:79493940-79493959 None:intergenic 55.0%
GCAATTGCCTGGAAAGCTGG+GGG - chr4_4:79493941-79493960 None:intergenic 55.0%
GGCAATTGCCTGGAAAGCTG+GGG - chr4_4:79493942-79493961 None:intergenic 55.0%
GGGCAATTGCCTGGAAAGCT+GGG - chr4_4:79493943-79493962 None:intergenic 55.0%
GTCCAGCACAATCGGGTTAC+GGG - chr4_4:79493963-79493982 None:intergenic 55.0%
GGTCCAGCACAATCGGGTTA+CGG - chr4_4:79493964-79493983 None:intergenic 55.0%
ACGCAAGGTCCAGCACAATC+GGG - chr4_4:79493970-79493989 None:intergenic 55.0%
TGAACTCGCCGGAATCGCAG+CGG + chr4_4:79487018-79487037 Msa0706500:five_prime_UTR 60.0%
AATCGCGTAGGGGAAGGGGA+GGG - chr4_4:79487092-79487111 None:intergenic 60.0%
AAATCGCGTAGGGGAAGGGG+AGG - chr4_4:79487093-79487112 None:intergenic 60.0%
GCGAAATCGCGTAGGGGAAG+GGG - chr4_4:79487096-79487115 None:intergenic 60.0%
AGGGATCAGACCGCTTCCCA+TGG - chr4_4:79488176-79488195 None:intergenic 60.0%
CTCACCACTATCGGGCGACT+CGG + chr4_4:79488291-79488310 Msa0706500:intron 60.0%
TCACCACTATCGGGCGACTC+GGG + chr4_4:79488292-79488311 Msa0706500:intron 60.0%
GGGAGGGTGATAGACAGGAG+TGG - chr4_4:79488478-79488497 None:intergenic 60.0%
TCTCCTCTCATAGGGCCCCT+AGG + chr4_4:79492733-79492752 Msa0706500:intron 60.0%
CGGGCAATTGCCTGGAAAGC+TGG - chr4_4:79493944-79493963 None:intergenic 60.0%
TCGGGTTACGGGCAATTGCC+TGG - chr4_4:79493952-79493971 None:intergenic 60.0%
TGCCCGTAACCCGATTGTGC+TGG + chr4_4:79493958-79493977 Msa0706500:CDS 60.0%
ATCGCGTAGGGGAAGGGGAG+GGG - chr4_4:79487091-79487110 None:intergenic 65.0%
TGACCCGAGTCGCCCGATAG+TGG - chr4_4:79488298-79488317 None:intergenic 65.0%
GTACCAGGCTGCCATGGCTG+AGG + chr4_4:79490312-79490331 Msa0706500:intron 65.0%
TTGCCTCAGCCATGGCAGCC+TGG - chr4_4:79490318-79490337 None:intergenic 65.0%
TGGGGGGAAGGGAGCAATGC+GGG - chr4_4:79493924-79493943 None:intergenic 65.0%
CTGGGGGGAAGGGAGCAATG+CGG - chr4_4:79493925-79493944 None:intergenic 65.0%
TCCCTTCCCCCCAGCTTTCC+AGG + chr4_4:79493931-79493950 Msa0706500:CDS 65.0%
GCCTGGAAAGCTGGGGGGAA+GGG - chr4_4:79493935-79493954 None:intergenic 65.0%
TGCCTGGAAAGCTGGGGGGA+AGG - chr4_4:79493936-79493955 None:intergenic 65.0%
GTAGGGGAAGGGGAGGGGGA+AGG - chr4_4:79487086-79487105 None:intergenic 70.0%
TCGCGTAGGGGAAGGGGAGG+GGG - chr4_4:79487090-79487109 None:intergenic 70.0%
GGGGGGAAGGGAGCAATGCG+GGG - chr4_4:79493923-79493942 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 79486969 79494421 79486969 ID=Msa0706500;Name=Msa0706500
chr4_4 mRNA 79486969 79494421 79486969 ID=Msa0706500-mRNA-1;Parent=Msa0706500;Name=Msa0706500-mRNA-1;_AED=0.12;_eAED=0.12;_QI=109|1|1|1|0.92|0.85|14|343|603
chr4_4 exon 79486969 79487072 79486969 ID=Msa0706500-mRNA-1:exon:25622;Parent=Msa0706500-mRNA-1
chr4_4 exon 79487291 79487386 79487291 ID=Msa0706500-mRNA-1:exon:25623;Parent=Msa0706500-mRNA-1
chr4_4 exon 79487516 79487582 79487516 ID=Msa0706500-mRNA-1:exon:25624;Parent=Msa0706500-mRNA-1
chr4_4 exon 79487718 79487828 79487718 ID=Msa0706500-mRNA-1:exon:25625;Parent=Msa0706500-mRNA-1
chr4_4 exon 79488926 79489121 79488926 ID=Msa0706500-mRNA-1:exon:25626;Parent=Msa0706500-mRNA-1
chr4_4 exon 79489644 79489729 79489644 ID=Msa0706500-mRNA-1:exon:25627;Parent=Msa0706500-mRNA-1
chr4_4 exon 79489963 79490158 79489963 ID=Msa0706500-mRNA-1:exon:25628;Parent=Msa0706500-mRNA-1
chr4_4 exon 79490319 79490430 79490319 ID=Msa0706500-mRNA-1:exon:25629;Parent=Msa0706500-mRNA-1
chr4_4 exon 79491581 79491708 79491581 ID=Msa0706500-mRNA-1:exon:25630;Parent=Msa0706500-mRNA-1
chr4_4 exon 79491807 79492013 79491807 ID=Msa0706500-mRNA-1:exon:25631;Parent=Msa0706500-mRNA-1
chr4_4 exon 79492155 79492264 79492155 ID=Msa0706500-mRNA-1:exon:25632;Parent=Msa0706500-mRNA-1
chr4_4 exon 79492885 79493014 79492885 ID=Msa0706500-mRNA-1:exon:25633;Parent=Msa0706500-mRNA-1
chr4_4 exon 79493551 79493697 79493551 ID=Msa0706500-mRNA-1:exon:25634;Parent=Msa0706500-mRNA-1
chr4_4 exon 79493848 79494421 79493848 ID=Msa0706500-mRNA-1:exon:25635;Parent=Msa0706500-mRNA-1
chr4_4 five_prime_UTR 79486969 79487072 79486969 ID=Msa0706500-mRNA-1:five_prime_utr;Parent=Msa0706500-mRNA-1
chr4_4 five_prime_UTR 79487291 79487295 79487291 ID=Msa0706500-mRNA-1:five_prime_utr;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79487296 79487386 79487296 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79487516 79487582 79487516 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79487718 79487828 79487718 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79488926 79489121 79488926 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79489644 79489729 79489644 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79489963 79490158 79489963 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79490319 79490430 79490319 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79491581 79491708 79491581 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79491807 79492013 79491807 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79492155 79492264 79492155 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79492885 79493014 79492885 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79493551 79493697 79493551 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 CDS 79493848 79494078 79493848 ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1
chr4_4 three_prime_UTR 79494079 79494421 79494079 ID=Msa0706500-mRNA-1:three_prime_utr;Parent=Msa0706500-mRNA-1
Gene Sequence

>Msa0706500

ATGGGAAAAGAGAATCAATCATCTGCCATGGAAGTCGATGATCCGAAATCAACCAATTCTGATCAGATTGTTCCCAAATTCTCAATCACTGTTCTGCAGCTGTTAAAATCAGCACAAATGCAGCATGGTTTGCGTCACGGAGATTACACTCGCTATCGGAGGTATTGTACAGCCCGATTGAGGAGGTTGTATAAATCTTTGAAGTTTACCCACGGTCGTGGCAAGTATACGAAAAGAACCTTAACTGAGTCTAATGTCACTGAAGTAAGGTTTCTTCATGTGATTCTCTATTCGGCGGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGACCAAATGCATCTCAACGAATCTATCTGATTGGTAGGTTGCGCAAGGCAGTAAAGTGGGCTACTTTGTTTTCACAATTTTGTGCGGTCAAGGCAGATTCTAGGACATCTTTGGAAGCTGAGGCTTACGAGTCCTATATGAAGGGGAGTTTGTTGTTTGAGCAAGATCAGAACTGGGATGTGGCTTTAAAGCACTTCAAAAGTGCTAGGGCTGTATACGAGGAGTTAGGGAAATATGGAGATTTGGATAACCAAGTTTTGTGTCGTGAGCGGGTTGAGGAACTAGAACCTAGTATCAGATACTGCCTTCACAAAATTGGCCAGTCAAATCTACAAGCCTCTGAACTACTAAACATTGGCGATATGGAAGGACCTGCATTAGACCTTTTTAAAGCTAAACTAGAGGCTGCCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTTCATTGGCTTGGCCATAGATTTCCAATATCAAATGCCAAAACAAGGGTTGCCATTTTGAAAGCCCAGGAGCTGGAGAAAGATATCCATGGTCCCTTGGCAGAAAATATTTCAGCGGACAAAAGACTGGTTATTTTTGACAAAATCTTTTCTGCATACCATGATGCTAGAGGCTGTATTCGGGCTGATTTGGCCACTGCAGGAAATGCAGAAAGTGTGAAAGATGATTTGAATGGTCTTGATAAGGCTGTCAGTGCTGTCTTAGGAGAAAGAACCATTGAGCGCAACCTTTTGTTGGTCAGGGTTGCAAAAAGTAAACTTGCAAAGCGTAATGATGATAAAAATGAAAAACTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACATCTGATCTATCTGATTTAGTCAGTTCTGGAAGGGACCAAAAGCCAGAAGAAGTTAGCTTTGCTGAAGAGTGTTCATGCAAAAGTTTGGCTTTTCGAGCAGAAAGGTGCTTTTATGTTGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATGCTTTGTACTGTCGTGCTCGCAGTTTAGCTGAAGATGCCTTAGGAAAGCTTCAAATGTTAGATGGCAATAGTAAGACTATGGTGAAAGAATTAGAGGTCTTGTGCAATGAATGCCGTTCTAACAGTTGTATAGAACATGCATTGGGGATCATGGAGGAGAAGAGGACTCAAGAGAATATCTCCGAAGGGATCTCCAATATATCATTGACCGGAGCTGAGCGGTTGGAGAAATTCCTATTGGAGAAACTTGATGTTTATGAGTCTGCTGTGGGTGATTCAAACGTGAAATCTGCACCCCGCATTGCTCCCTTCCCCCCAGCTTTCCAGGCAATTGCCCGTAACCCGATTGTGCTGGACCTTGCGTATAACACTATCGAATTCCCAGATATTCAAAATAGGATGAAGAAGGACAAAAGAGCAAAGGGTGGCTTTATAAGCAGAATATTTGGATGA

Protein sequence

>Msa0706500

MGKENQSSAMEVDDPKSTNSDQIVPKFSITVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTKRTLTESNVTEVRFLHVILYSAERAWSHAMEKRQLPNGPNASQRIYLIGRLRKAVKWATLFSQFCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLNIGDMEGPALDLFKAKLEAAMAEARSQQAASMTEFHWLGHRFPISNAKTRVAILKAQELEKDIHGPLAENISADKRLVIFDKIFSAYHDARGCIRADLATAGNAESVKDDLNGLDKAVSAVLGERTIERNLLLVRVAKSKLAKRNDDKNEKLTKPEELVRLYDLLLQNTSDLSDLVSSGRDQKPEEVSFAEECSCKSLAFRAERCFYVAKSYSVAGKRAEAYALYCRARSLAEDALGKLQMLDGNSKTMVKELEVLCNECRSNSCIEHALGIMEEKRTQENISEGISNISLTGAERLEKFLLEKLDVYESAVGDSNVKSAPRIAPFPPAFQAIARNPIVLDLAYNTIEFPDIQNRMKKDKRAKGGFISRIFG*