Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0706500 | XP_003630590.1 | 99.171 | 603 | 5 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1238 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0706500 | sp|Q8BMA6|SRP68_MOUSE | 33.953 | 592 | 350 | 15 | 27 | 603 | 57 | 622 | 2.46e-94 | 305 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0706500 | G7LIT8 | 99.171 | 603 | 5 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1238 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007850 | Msa0706500 | 0.832490 | 9.178067e-56 | -8.615850e-47 |
Msa0012940 | Msa0706500 | 0.801224 | 9.961244e-49 | -8.615850e-47 |
Msa0017730 | Msa0706500 | 0.806136 | 9.525735e-50 | -8.615850e-47 |
Msa0022970 | Msa0706500 | 0.804583 | 2.015213e-49 | -8.615850e-47 |
Msa0027630 | Msa0706500 | 0.808462 | 3.061085e-50 | -8.615850e-47 |
Msa0029260 | Msa0706500 | 0.800244 | 1.578552e-48 | -8.615850e-47 |
Msa0032810 | Msa0706500 | 0.819759 | 9.810477e-53 | -8.615850e-47 |
Msa0033880 | Msa0706500 | 0.813700 | 2.241615e-51 | -8.615850e-47 |
Msa0045730 | Msa0706500 | 0.878752 | 2.177413e-69 | -8.615850e-47 |
Msa0046830 | Msa0706500 | 0.834243 | 3.354913e-56 | -8.615850e-47 |
Msa0048180 | Msa0706500 | 0.837414 | 5.271392e-57 | -8.615850e-47 |
Msa0052300 | Msa0706500 | -0.803693 | 3.085600e-49 | -8.615850e-47 |
Msa0052350 | Msa0706500 | -0.820696 | 5.983943e-53 | -8.615850e-47 |
Msa0052790 | Msa0706500 | 0.815884 | 7.354878e-52 | -8.615850e-47 |
Msa0056270 | Msa0706500 | 0.819676 | 1.024887e-52 | -8.615850e-47 |
Msa0057610 | Msa0706500 | 0.817268 | 3.601497e-52 | -8.615850e-47 |
Msa0076040 | Msa0706500 | 0.808968 | 2.386300e-50 | -8.615850e-47 |
Msa0093010 | Msa0706500 | 0.834101 | 3.642102e-56 | -8.615850e-47 |
Msa0093850 | Msa0706500 | 0.801161 | 1.026118e-48 | -8.615850e-47 |
Msa0097580 | Msa0706500 | 0.820833 | 5.564512e-53 | -8.615850e-47 |
Msa0103240 | Msa0706500 | 0.831384 | 1.721217e-55 | -8.615850e-47 |
Msa0116130 | Msa0706500 | 0.869883 | 2.217132e-66 | -8.615850e-47 |
Msa0118710 | Msa0706500 | 0.819520 | 1.112552e-52 | -8.615850e-47 |
Msa0604960 | Msa0706500 | 0.802749 | 4.840085e-49 | -8.615850e-47 |
Msa0609000 | Msa0706500 | 0.807492 | 4.923001e-50 | -8.615850e-47 |
Msa0615580 | Msa0706500 | 0.829053 | 6.384184e-55 | -8.615850e-47 |
Msa0618930 | Msa0706500 | 0.821596 | 3.712791e-53 | -8.615850e-47 |
Msa0619860 | Msa0706500 | 0.875431 | 3.098621e-68 | -8.615850e-47 |
Msa0622750 | Msa0706500 | 0.829244 | 5.736984e-55 | -8.615850e-47 |
Msa0623200 | Msa0706500 | 0.901022 | 4.077593e-78 | -8.615850e-47 |
Msa0628420 | Msa0706500 | 0.810578 | 1.075301e-50 | -8.615850e-47 |
Msa0631250 | Msa0706500 | 0.834929 | 2.255090e-56 | -8.615850e-47 |
Msa0633570 | Msa0706500 | 0.855052 | 8.172492e-62 | -8.615850e-47 |
Msa0659030 | Msa0706500 | 0.818621 | 1.781938e-52 | -8.615850e-47 |
Msa0666230 | Msa0706500 | 0.871197 | 8.212178e-67 | -8.615850e-47 |
Msa0672100 | Msa0706500 | 0.826318 | 2.896737e-54 | -8.615850e-47 |
Msa0693210 | Msa0706500 | 0.834205 | 3.428899e-56 | -8.615850e-47 |
Msa0694990 | Msa0706500 | 0.839643 | 1.401234e-57 | -8.615850e-47 |
Msa0699190 | Msa0706500 | 0.811399 | 7.137989e-51 | -8.615850e-47 |
Msa0704660 | Msa0706500 | 0.830958 | 2.189956e-55 | -8.615850e-47 |
Msa0705000 | Msa0706500 | 0.842361 | 2.709726e-58 | -8.615850e-47 |
Msa0705040 | Msa0706500 | 0.830092 | 3.568201e-55 | -8.615850e-47 |
Msa0706500 | Msa0712610 | 0.811158 | 8.051102e-51 | -8.615850e-47 |
Msa0706500 | Msa0729200 | 0.836648 | 8.271360e-57 | -8.615850e-47 |
Msa0706500 | Msa0766080 | 0.813807 | 2.123171e-51 | -8.615850e-47 |
Msa0706500 | Msa0769590 | 0.839904 | 1.198509e-57 | -8.615850e-47 |
Msa0706500 | Msa0780930 | 0.814437 | 1.541677e-51 | -8.615850e-47 |
Msa0706500 | Msa0780960 | 0.803609 | 3.212542e-49 | -8.615850e-47 |
Msa0706500 | Msa0781080 | 0.808927 | 2.435387e-50 | -8.615850e-47 |
Msa0706500 | Msa0783490 | 0.815910 | 7.257617e-52 | -8.615850e-47 |
Msa0706500 | Msa0785130 | 0.857276 | 1.822733e-62 | -8.615850e-47 |
Msa0706500 | Msa0794050 | 0.823896 | 1.081811e-53 | -8.615850e-47 |
Msa0706500 | Msa0806880 | 0.839603 | 1.435462e-57 | -8.615850e-47 |
Msa0706500 | Msa0808800 | 0.857669 | 1.394605e-62 | -8.615850e-47 |
Msa0706500 | Msa0817540 | 0.808445 | 3.085809e-50 | -8.615850e-47 |
Msa0706500 | Msa0818770 | 0.822793 | 1.958529e-53 | -8.615850e-47 |
Msa0706500 | Msa0819210 | 0.812607 | 3.894452e-51 | -8.615850e-47 |
Msa0706500 | Msa0819540 | 0.838626 | 2.572009e-57 | -8.615850e-47 |
Msa0706500 | Msa0822170 | 0.822524 | 2.262723e-53 | -8.615850e-47 |
Msa0706500 | Msa0822180 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
Msa0706500 | Msa0825270 | 0.807376 | 5.209629e-50 | -8.615850e-47 |
Msa0706500 | Msa0858440 | 0.811906 | 5.537080e-51 | -8.615850e-47 |
Msa0706500 | Msa0867060 | 0.848649 | 5.359137e-60 | -8.615850e-47 |
Msa0706500 | Msa0888810 | 0.810559 | 1.085455e-50 | -8.615850e-47 |
Msa0706500 | Msa0906780 | 0.834438 | 2.997072e-56 | -8.615850e-47 |
Msa0706500 | Msa0928120 | 0.809665 | 1.691607e-50 | -8.615850e-47 |
Msa0706500 | Msa0943170 | 0.819045 | 1.427179e-52 | -8.615850e-47 |
Msa0706500 | Msa0945480 | 0.815307 | 9.886296e-52 | -8.615850e-47 |
Msa0706500 | Msa0958000 | 0.814461 | 1.523005e-51 | -8.615850e-47 |
Msa0706500 | Msa0960830 | 0.843059 | 1.768279e-58 | -8.615850e-47 |
Msa0706500 | Msa0963020 | 0.855255 | 7.133812e-62 | -8.615850e-47 |
Msa0706500 | Msa0968440 | 0.828820 | 7.269887e-55 | -8.615850e-47 |
Msa0706500 | Msa0994290 | 0.814378 | 1.588637e-51 | -8.615850e-47 |
Msa0706500 | Msa0997430 | 0.818404 | 1.995280e-52 | -8.615850e-47 |
Msa0706500 | Msa1019240 | 0.851611 | 7.929839e-61 | -8.615850e-47 |
Msa0706500 | Msa1019260 | 0.839578 | 1.457273e-57 | -8.615850e-47 |
Msa0706500 | Msa1021120 | 0.819385 | 1.194125e-52 | -8.615850e-47 |
Msa0706500 | Msa1023160 | 0.822100 | 2.837595e-53 | -8.615850e-47 |
Msa0706500 | Msa1025940 | 0.807463 | 4.993320e-50 | -8.615850e-47 |
Msa0706500 | Msa1036550 | 0.808861 | 2.515237e-50 | -8.615850e-47 |
Msa0706500 | Msa1039520 | 0.806516 | 7.920329e-50 | -8.615850e-47 |
Msa0706500 | Msa1039900 | 0.817257 | 3.622706e-52 | -8.615850e-47 |
Msa0706500 | Msa1048690 | 0.825253 | 5.184983e-54 | -8.615850e-47 |
Msa0706500 | Msa1070390 | 0.827150 | 1.834250e-54 | -8.615850e-47 |
Msa0706500 | Msa1072710 | 0.856620 | 2.845170e-62 | -8.615850e-47 |
Msa0706500 | Msa1076560 | 0.800353 | 1.499531e-48 | -8.615850e-47 |
Msa0706500 | Msa1079190 | 0.804925 | 1.709167e-49 | -8.615850e-47 |
Msa0706500 | Msa1104210 | 0.832968 | 6.981363e-56 | -8.615850e-47 |
Msa0706500 | Msa1121680 | 0.800088 | 1.698338e-48 | -8.615850e-47 |
Msa0706500 | Msa1123350 | 0.815274 | 1.005339e-51 | -8.615850e-47 |
Msa0706500 | Msa1123830 | 0.816045 | 6.770080e-52 | -8.615850e-47 |
Msa0706500 | Msa1124070 | 0.825221 | 5.276299e-54 | -8.615850e-47 |
Msa0706500 | Msa1125500 | 0.805843 | 1.097572e-49 | -8.615850e-47 |
Msa0706500 | Msa1126830 | 0.811240 | 7.728595e-51 | -8.615850e-47 |
Msa0706500 | Msa1127590 | 0.823653 | 1.233387e-53 | -8.615850e-47 |
Msa0706500 | Msa1131170 | 0.843371 | 1.459733e-58 | -8.615850e-47 |
Msa0706500 | Msa1131560 | 0.816075 | 6.665662e-52 | -8.615850e-47 |
Msa0706500 | Msa1143510 | 0.810512 | 1.110872e-50 | -8.615850e-47 |
Msa0706500 | Msa1145240 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
Msa0706500 | Msa1165780 | 0.848314 | 6.634761e-60 | -8.615850e-47 |
Msa0706500 | Msa1166870 | 0.854225 | 1.418059e-61 | -8.615850e-47 |
Msa0706500 | Msa1173160 | 0.810678 | 1.022709e-50 | -8.615850e-47 |
Msa0706500 | Msa1175350 | 0.812390 | 4.343048e-51 | -8.615850e-47 |
Msa0706500 | Msa1179980 | 0.805841 | 1.098576e-49 | -8.615850e-47 |
Msa0706500 | Msa1184370 | 0.810859 | 9.345442e-51 | -8.615850e-47 |
Msa0706500 | Msa1195300 | 0.804423 | 2.176073e-49 | -8.615850e-47 |
Msa0706500 | Msa1202580 | 0.806925 | 6.491443e-50 | -8.615850e-47 |
Msa0706500 | Msa1206090 | 0.852344 | 4.910541e-61 | -8.615850e-47 |
Msa0706500 | Msa1208020 | 0.872504 | 3.022532e-67 | -8.615850e-47 |
Msa0706500 | Msa1227690 | 0.818299 | 2.107072e-52 | -8.615850e-47 |
Msa0706500 | Msa1230580 | 0.842057 | 3.262354e-58 | -8.615850e-47 |
Msa0706500 | Msa1241190 | 0.817920 | 2.566913e-52 | -8.615850e-47 |
Msa0706500 | Msa1256770 | 0.822142 | 2.774582e-53 | -8.615850e-47 |
Msa0706500 | Msa1256950 | 0.867189 | 1.643877e-65 | -8.615850e-47 |
Msa0706500 | Msa1262890 | 0.863076 | 3.222916e-64 | -8.615850e-47 |
Msa0706500 | Msa1266060 | 0.842888 | 1.964000e-58 | -8.615850e-47 |
Msa0706500 | Msa1270620 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
Msa0706500 | Msa1270690 | 0.803471 | 3.432232e-49 | -8.615850e-47 |
Msa0706500 | Msa1277710 | 0.805375 | 1.376187e-49 | -8.615850e-47 |
Msa0706500 | Msa1298050 | 0.809101 | 2.234674e-50 | -8.615850e-47 |
Msa0706500 | Msa1329510 | 0.805256 | 1.457069e-49 | -8.615850e-47 |
Msa0706500 | Msa1329540 | 0.874140 | 8.522054e-68 | -8.615850e-47 |
Msa0706500 | Msa1331250 | 0.864663 | 1.033898e-64 | -8.615850e-47 |
Msa0706500 | Msa1331710 | 0.820021 | 8.548378e-53 | -8.615850e-47 |
Msa0706500 | Msa1339730 | 0.806391 | 8.414705e-50 | -8.615850e-47 |
Msa0706500 | Msa1349570 | 0.868023 | 8.884626e-66 | -8.615850e-47 |
Msa0706500 | Msa1362790 | 0.849110 | 3.991495e-60 | -8.615850e-47 |
Msa0706500 | Msa1363330 | 0.826534 | 2.573913e-54 | -8.615850e-47 |
Msa0706500 | Msa1369190 | 0.886547 | 3.110917e-72 | -8.615850e-47 |
Msa0706500 | Msa1373820 | 0.825333 | 4.962267e-54 | -8.615850e-47 |
Msa0706500 | Msa1379760 | 0.803940 | 2.742015e-49 | -8.615850e-47 |
Msa0706500 | Msa1386600 | 0.825641 | 4.196590e-54 | -8.615850e-47 |
Msa0706500 | Msa1410440 | 0.845369 | 4.239881e-59 | -8.615850e-47 |
Msa0706500 | Msa1411950 | 0.836171 | 1.094022e-56 | -8.615850e-47 |
Msa0706500 | Msa1413260 | 0.811681 | 6.199385e-51 | -8.615850e-47 |
Msa0706500 | Msa1413500 | 0.831905 | 1.280316e-55 | -8.615850e-47 |
Msa0706500 | Msa1418960 | -0.818228 | 2.187407e-52 | -8.615850e-47 |
Msa0706500 | Msa1425670 | 0.825053 | 5.781960e-54 | -8.615850e-47 |
Msa0706500 | Msa1426370 | 0.806676 | 7.327948e-50 | -8.615850e-47 |
Msa0706500 | Msa1426490 | 0.825384 | 4.827899e-54 | -8.615850e-47 |
Msa0706500 | Msa1427560 | 0.841131 | 5.723387e-58 | -8.615850e-47 |
Msa0706500 | Msa1428810 | 0.835414 | 1.701434e-56 | -8.615850e-47 |
Msa0706500 | Msa1434740 | 0.814493 | 1.497994e-51 | -8.615850e-47 |
Msa0706500 | Msa1438050 | 0.848338 | 6.533185e-60 | -8.615850e-47 |
Msa0706500 | Msa1442850 | 0.817357 | 3.439087e-52 | -8.615850e-47 |
Msa0706500 | Msa1450280 | 0.811027 | 8.594834e-51 | -8.615850e-47 |
Msa0706500 | Msa1455950 | 0.834379 | 3.102053e-56 | -8.615850e-47 |
Msa0706500 | Msa1456050 | 0.823774 | 1.155537e-53 | -8.615850e-47 |
Msa0706500 | Msa1462860 | 0.861217 | 1.198362e-63 | -8.615850e-47 |
Msa0706500 | Msa1465260 | 0.813649 | 2.299590e-51 | -8.615850e-47 |
Msa0123510 | Msa0706500 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
Msa0127850 | Msa0706500 | 0.810545 | 1.092962e-50 | -8.615850e-47 |
Msa0165950 | Msa0706500 | 0.820046 | 8.435522e-53 | -8.615850e-47 |
Msa0166750 | Msa0706500 | 0.831638 | 1.489991e-55 | -8.615850e-47 |
Msa0167480 | Msa0706500 | 0.800421 | 1.452462e-48 | -8.615850e-47 |
Msa0174000 | Msa0706500 | 0.804421 | 2.177389e-49 | -8.615850e-47 |
Msa0177960 | Msa0706500 | 0.807462 | 4.996235e-50 | -8.615850e-47 |
Msa0179030 | Msa0706500 | 0.821535 | 3.835428e-53 | -8.615850e-47 |
Msa0180020 | Msa0706500 | 0.805519 | 1.283811e-49 | -8.615850e-47 |
Msa0181610 | Msa0706500 | 0.813333 | 2.699050e-51 | -8.615850e-47 |
Msa0188350 | Msa0706500 | 0.803828 | 2.893595e-49 | -8.615850e-47 |
Msa0202490 | Msa0706500 | 0.822628 | 2.139564e-53 | -8.615850e-47 |
Msa0218830 | Msa0706500 | 0.867038 | 1.837028e-65 | -8.615850e-47 |
Msa0219120 | Msa0706500 | 0.831671 | 1.462554e-55 | -8.615850e-47 |
Msa0221030 | Msa0706500 | 0.832650 | 8.376936e-56 | -8.615850e-47 |
Msa0224560 | Msa0706500 | 0.807981 | 3.876106e-50 | -8.615850e-47 |
Msa0226460 | Msa0706500 | 0.811890 | 5.583393e-51 | -8.615850e-47 |
Msa0230490 | Msa0706500 | 0.826789 | 2.236577e-54 | -8.615850e-47 |
Msa0230520 | Msa0706500 | 0.845840 | 3.160316e-59 | -8.615850e-47 |
Msa0231100 | Msa0706500 | 0.817927 | 2.558520e-52 | -8.615850e-47 |
Msa0372490 | Msa0706500 | 0.803299 | 3.724458e-49 | -8.615850e-47 |
Msa0376820 | Msa0706500 | 0.855911 | 4.592017e-62 | -8.615850e-47 |
Msa0384670 | Msa0706500 | 0.808279 | 3.348300e-50 | -8.615850e-47 |
Msa0384880 | Msa0706500 | 0.827056 | 1.930909e-54 | -8.615850e-47 |
Msa0423750 | Msa0706500 | 0.889764 | 1.809041e-73 | -8.615850e-47 |
Msa0434770 | Msa0706500 | 0.800677 | 1.288216e-48 | -8.615850e-47 |
Msa0435370 | Msa0706500 | 0.803993 | 2.673462e-49 | -8.615850e-47 |
Msa0443390 | Msa0706500 | 0.870165 | 1.792888e-66 | -8.615850e-47 |
Msa0456430 | Msa0706500 | 0.829703 | 4.438955e-55 | -8.615850e-47 |
Msa0470530 | Msa0706500 | 0.867794 | 1.052661e-65 | -8.615850e-47 |
Msa0472130 | Msa0706500 | 0.853227 | 2.747486e-61 | -8.615850e-47 |
Msa0478580 | Msa0706500 | 0.809763 | 1.611113e-50 | -8.615850e-47 |
Msa0244980 | Msa0706500 | 0.802994 | 4.306473e-49 | -8.615850e-47 |
Msa0245060 | Msa0706500 | 0.854327 | 1.324888e-61 | -8.615850e-47 |
Msa0245430 | Msa0706500 | 0.806777 | 6.977495e-50 | -8.615850e-47 |
Msa0245580 | Msa0706500 | 0.876015 | 1.952808e-68 | -8.615850e-47 |
Msa0258850 | Msa0706500 | 0.823467 | 1.363672e-53 | -8.615850e-47 |
Msa0262480 | Msa0706500 | 0.849312 | 3.505194e-60 | -8.615850e-47 |
Msa0269470 | Msa0706500 | 0.824417 | 8.165702e-54 | -8.615850e-47 |
Msa0284180 | Msa0706500 | 0.816986 | 4.167731e-52 | -8.615850e-47 |
Msa0291520 | Msa0706500 | 0.812021 | 5.227696e-51 | -8.615850e-47 |
Msa0296250 | Msa0706500 | 0.843747 | 1.158684e-58 | -8.615850e-47 |
Msa0298200 | Msa0706500 | 0.830963 | 2.183732e-55 | -8.615850e-47 |
Msa0300350 | Msa0706500 | 0.829409 | 5.231535e-55 | -8.615850e-47 |
Msa0304590 | Msa0706500 | 0.806129 | 9.554855e-50 | -8.615850e-47 |
Msa0304660 | Msa0706500 | 0.808114 | 3.630585e-50 | -8.615850e-47 |
Msa0305780 | Msa0706500 | 0.818063 | 2.383689e-52 | -8.615850e-47 |
Msa0306690 | Msa0706500 | 0.807852 | 4.127824e-50 | -8.615850e-47 |
Msa0317910 | Msa0706500 | 0.826749 | 2.286287e-54 | -8.615850e-47 |
Msa0320590 | Msa0706500 | 0.814944 | 1.190092e-51 | -8.615850e-47 |
Msa0327300 | Msa0706500 | 0.800044 | 1.733744e-48 | -8.615850e-47 |
Msa0331700 | Msa0706500 | 0.808515 | 2.982537e-50 | -8.615850e-47 |
Msa0332640 | Msa0706500 | 0.806154 | 9.438902e-50 | -8.615850e-47 |
Msa0336010 | Msa0706500 | 0.806948 | 6.419332e-50 | -8.615850e-47 |
Msa0337670 | Msa0706500 | 0.819930 | 8.964720e-53 | -8.615850e-47 |
Msa0341690 | Msa0706500 | 0.802075 | 6.663038e-49 | -8.615850e-47 |
Msa0348830 | Msa0706500 | 0.908283 | 2.025766e-81 | -8.615850e-47 |
Msa0359040 | Msa0706500 | 0.806452 | 8.171314e-50 | -8.615850e-47 |
Msa0483110 | Msa0706500 | 0.813898 | 2.027695e-51 | -8.615850e-47 |
Msa0511770 | Msa0706500 | 0.801844 | 7.431640e-49 | -8.615850e-47 |
Msa0512850 | Msa0706500 | 0.821278 | 4.395742e-53 | -8.615850e-47 |
Msa0520660 | Msa0706500 | 0.809725 | 1.641742e-50 | -8.615850e-47 |
Msa0526540 | Msa0706500 | 0.831854 | 1.318453e-55 | -8.615850e-47 |
Msa0527020 | Msa0706500 | 0.806093 | 9.725490e-50 | -8.615850e-47 |
Msa0527150 | Msa0706500 | 0.851695 | 7.505883e-61 | -8.615850e-47 |
Msa0531250 | Msa0706500 | 0.816160 | 6.382511e-52 | -8.615850e-47 |
Msa0531650 | Msa0706500 | 0.813287 | 2.763086e-51 | -8.615850e-47 |
Msa0534750 | Msa0706500 | 0.863729 | 2.021654e-64 | -8.615850e-47 |
Msa0550570 | Msa0706500 | 0.814899 | 1.217810e-51 | -8.615850e-47 |
Msa0576940 | Msa0706500 | 0.830855 | 2.321495e-55 | -8.615850e-47 |
Msa0581110 | Msa0706500 | 0.806730 | 7.137472e-50 | -8.615850e-47 |
Msa0593700 | Msa0706500 | 0.850136 | 2.063747e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0706500 | MtrunA17_Chr8g0385771 | 99.171 | 603 | 5 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1238 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0706500 | AT5G61970.1 | 74.917 | 602 | 144 | 3 | 1 | 599 | 1 | 598 | 0.0 | 950 |
Find 167 sgRNAs with CRISPR-Local
Find 510 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAACCAGTGATTGAGAATT+TGG | 0.115111 | 4_4:-79487369 | None:intergenic |
TCATAATCAATGTTCAAAAT+TGG | 0.161311 | 4_4:-79494293 | None:intergenic |
TTGAATTATTGAAGACTTAA+TGG | 0.166875 | 4_4:+79487277 | Msa0706500:intron |
AGCTAACTTCTTCTGGCTTT+TGG | 0.191919 | 4_4:-79492196 | None:intergenic |
GGCTTTATAAGCAGAATATT+TGG | 0.214752 | 4_4:+79494052 | Msa0706500:CDS |
TTGAGTTGCCTAGAGATATT+TGG | 0.228836 | 4_4:+79494176 | Msa0706500:three_prime_UTR |
GTCAAATTCCGCTGCGATTC+CGG | 0.238104 | 4_4:-79487026 | None:intergenic |
CCTCTAGTTTAGCTTTAAAA+AGG | 0.275792 | 4_4:-79490137 | None:intergenic |
CAAAATGGCAACCCTTGTTT+TGG | 0.275936 | 4_4:-79490404 | None:intergenic |
TGATCAGAATTGGTTGATTT+CGG | 0.285982 | 4_4:-79487338 | None:intergenic |
TCAGCAAAGCTAACTTCTTC+TGG | 0.288214 | 4_4:-79492203 | None:intergenic |
TCTTCATGTGATTCTCTATT+CGG | 0.294404 | 4_4:+79488929 | Msa0706500:CDS |
CTATCTGATTTAGTCAGTTC+TGG | 0.303730 | 4_4:+79492167 | Msa0706500:CDS |
AGATACTGCCTTCACAAAAT+TGG | 0.305322 | 4_4:+79490051 | Msa0706500:CDS |
AGCATATTTGATTCAGTGTT+TGG | 0.315353 | 4_4:+79494078 | Msa0706500:exon |
GGCAGATTCTAGGACATCTT+TGG | 0.324881 | 4_4:+79489091 | Msa0706500:CDS |
TGAATTATTGAAGACTTAAT+GGG | 0.325650 | 4_4:+79487278 | Msa0706500:intron |
TACGAGGAGTTAGGGAAATA+TGG | 0.327193 | 4_4:+79489970 | Msa0706500:CDS |
CTTCCATGACAGAATTTCAT+TGG | 0.334299 | 4_4:+79490353 | Msa0706500:CDS |
GTGCGGTCAAGGCAGATTCT+AGG | 0.336790 | 4_4:+79489081 | Msa0706500:CDS |
GTTAGGGAAATATGGAGATT+TGG | 0.338508 | 4_4:+79489978 | Msa0706500:CDS |
CATAATCAATGTTCAAAATT+GGG | 0.338972 | 4_4:-79494292 | None:intergenic |
CGGGCAATTGCCTGGAAAGC+TGG | 0.340905 | 4_4:-79493941 | None:intergenic |
GGATATCTTTCTCCAGCTCC+TGG | 0.341220 | 4_4:-79491582 | None:intergenic |
ACTACTAAACATTGGCGATA+TGG | 0.346999 | 4_4:+79490098 | Msa0706500:CDS |
CATTTGATATTGGAAATCTA+TGG | 0.352525 | 4_4:-79490381 | None:intergenic |
AGGCTGTATTCGGGCTGATT+TGG | 0.353297 | 4_4:+79491687 | Msa0706500:CDS |
AATTCCCAGATATTCAAAAT+AGG | 0.359611 | 4_4:+79494002 | Msa0706500:CDS |
AAGATACCAACCTTTCAAAA+TGG | 0.363789 | 4_4:-79490419 | None:intergenic |
TATAAGCGAACAAGCTCTTC+AGG | 0.367288 | 4_4:-79491975 | None:intergenic |
ATGATGCTAGAGGCTGTATT+CGG | 0.368177 | 4_4:+79491677 | Msa0706500:CDS |
AAAACTACAAAGGCAACTAT+TGG | 0.368252 | 4_4:-79494346 | None:intergenic |
AAACAAATTGCATCGGAATC+AGG | 0.368525 | 4_4:+79486970 | Msa0706500:five_prime_UTR |
AGGGCTGTATACGAGGAGTT+AGG | 0.371688 | 4_4:+79489961 | Msa0706500:intron |
GGAAAGCTTCAAATGTTAGA+TGG | 0.373121 | 4_4:+79492982 | Msa0706500:CDS |
AAGGCTGTCAGTGCTGTCTT+AGG | 0.375481 | 4_4:+79491858 | Msa0706500:CDS |
GGGAACAATCTGATCAGAAT+TGG | 0.378268 | 4_4:-79487348 | None:intergenic |
GTCCAGCACAATCGGGTTAC+GGG | 0.380969 | 4_4:-79493960 | None:intergenic |
TGAGATGCATTTGGTCCATT+TGG | 0.384327 | 4_4:-79488993 | None:intergenic |
GGGCAATTGCCTGGAAAGCT+GGG | 0.390320 | 4_4:-79493940 | None:intergenic |
AAACATCAAGTTTCTCCAAT+AGG | 0.391438 | 4_4:-79493859 | None:intergenic |
AGCTCCGGTCAATGATATAT+TGG | 0.393649 | 4_4:-79493669 | None:intergenic |
TACGCAAGGTCCAGCACAAT+CGG | 0.400545 | 4_4:-79493968 | None:intergenic |
TCAGTTGGAGAAATTCCTAT+TGG | 0.402440 | 4_4:+79493844 | Msa0706500:intron |
ATTTATACAACCTCCTCAAT+CGG | 0.402621 | 4_4:-79487733 | None:intergenic |
CTTATATGATCTCTTGCTAC+AGG | 0.403111 | 4_4:+79491992 | Msa0706500:CDS |
GACTATGGTGAAAGAATTAG+AGG | 0.405813 | 4_4:+79493550 | Msa0706500:intron |
TGTTTGAGCAAGATCAGAAC+TGG | 0.406278 | 4_4:+79489675 | Msa0706500:CDS |
CAACAAAAGGTTGCGCTCAA+TGG | 0.416938 | 4_4:-79491889 | None:intergenic |
AGAGTGTTCATGCAAAAGTT+TGG | 0.418884 | 4_4:+79492226 | Msa0706500:CDS |
GCGAACAAGCTCTTCAGGTT+TGG | 0.420651 | 4_4:-79491970 | None:intergenic |
ATGACAGAATTTCATTGGCT+TGG | 0.420947 | 4_4:+79490358 | Msa0706500:CDS |
GGTCCAGCACAATCGGGTTA+CGG | 0.428004 | 4_4:-79493961 | None:intergenic |
TAGATTCGTTGAGATGCATT+TGG | 0.428149 | 4_4:-79489002 | None:intergenic |
CAACAAACTCCCCTTCATAT+AGG | 0.430300 | 4_4:-79489654 | None:intergenic |
AAACCAGTGATTGAGAATTT+GGG | 0.431036 | 4_4:-79487368 | None:intergenic |
TCGGGTTACGGGCAATTGCC+TGG | 0.434213 | 4_4:-79493949 | None:intergenic |
AGTTGTATAGAACATGCATT+GGG | 0.445865 | 4_4:+79493599 | Msa0706500:CDS |
AGAACATGCATTGGGGATCA+TGG | 0.454533 | 4_4:+79493607 | Msa0706500:CDS |
GTTCCCAAATTCTCAATCAC+TGG | 0.456061 | 4_4:+79487365 | Msa0706500:CDS |
TGATGCTAGAGGCTGTATTC+GGG | 0.459700 | 4_4:+79491678 | Msa0706500:CDS |
TGAAGGCAGTATCTGATACT+AGG | 0.459854 | 4_4:-79490042 | None:intergenic |
TCTATTCGGCGGAGAGAGCT+TGG | 0.459965 | 4_4:+79488943 | Msa0706500:CDS |
AGTGACATTAGACTCAGTTA+AGG | 0.466330 | 4_4:-79487798 | None:intergenic |
ATCATTGACCGGAGCTGAGC+GGG | 0.467588 | 4_4:+79493676 | Msa0706500:CDS |
CCCGCTCACGACACAAAACT+TGG | 0.470661 | 4_4:-79490005 | None:intergenic |
AATGTTAGATGGCAATAGTA+AGG | 0.476979 | 4_4:+79492993 | Msa0706500:CDS |
TTGCAACCCTGACCAACAAA+AGG | 0.482338 | 4_4:-79491902 | None:intergenic |
AACAAAGGAACCCGCGTCAT+CGG | 0.482732 | 4_4:-79494127 | None:intergenic |
CAGAGGCTTGTAGATTTGAC+TGG | 0.485146 | 4_4:-79490074 | None:intergenic |
GTAAATTTCCAAATATCTCT+AGG | 0.485327 | 4_4:-79494184 | None:intergenic |
GAAAGATATCCATGGTCCCT+TGG | 0.491522 | 4_4:+79491594 | Msa0706500:CDS |
GAGAAAAGGCAGCTTCCAAA+TGG | 0.491978 | 4_4:+79488978 | Msa0706500:CDS |
GGGCTGTATACGAGGAGTTA+GGG | 0.493311 | 4_4:+79489962 | Msa0706500:intron |
TCTCAACGAATCTATCTGAT+TGG | 0.494018 | 4_4:+79489011 | Msa0706500:CDS |
TGCCCGTAACCCGATTGTGC+TGG | 0.494225 | 4_4:+79493958 | Msa0706500:CDS |
AGTCTAATGTCACTGAAGTA+AGG | 0.494583 | 4_4:+79487807 | Msa0706500:CDS |
GGCTTACGAGTCCTATATGA+AGG | 0.496687 | 4_4:+79489643 | Msa0706500:intron |
AGTTTAGCTGAAGATGCCTT+AGG | 0.498692 | 4_4:+79492961 | Msa0706500:CDS |
GGAGTCATGCCATGGAGAAA+AGG | 0.500377 | 4_4:+79488964 | Msa0706500:CDS |
CAATATCAAATGCCAAAACA+AGG | 0.504437 | 4_4:+79490392 | Msa0706500:CDS |
TCGTATACTTGCCACGACCG+TGG | 0.504552 | 4_4:-79487769 | None:intergenic |
TTGAGATCTTGCCTCAGCCA+TGG | 0.506412 | 4_4:-79490323 | None:intergenic |
TATTTCAGCGGACAAAAGAC+TGG | 0.510192 | 4_4:+79491624 | Msa0706500:CDS |
ACTTTCTGCATTTCCTGCAG+TGG | 0.513474 | 4_4:-79491808 | None:intergenic |
CATACAGTGTGGCTGGAAAG+AGG | 0.514081 | 4_4:+79492905 | Msa0706500:CDS |
ATTATGTACCCGCTCAGCTC+CGG | 0.514586 | 4_4:-79493684 | None:intergenic |
TGATTTGAATGGTCTTGATA+AGG | 0.515403 | 4_4:+79491839 | Msa0706500:CDS |
TTGAAGTTTACCCACGGTCG+TGG | 0.516226 | 4_4:+79487758 | Msa0706500:CDS |
TTTATACAACCTCCTCAATC+GGG | 0.522055 | 4_4:-79487732 | None:intergenic |
CGTATACTTGCCACGACCGT+GGG | 0.522528 | 4_4:-79487768 | None:intergenic |
GATATCTTTCTCCAGCTCCT+GGG | 0.522684 | 4_4:-79491581 | None:intergenic |
TAAAGCACTTCAAAAGTGCT+AGG | 0.524363 | 4_4:+79489708 | Msa0706500:CDS |
TCACCGATTTCGATCCGAGT+TGG | 0.526538 | 4_4:-79494413 | None:intergenic |
TGATGTTTATGAGTCTGCTG+TGG | 0.529265 | 4_4:+79493874 | Msa0706500:CDS |
GTGTTTGTACCAGGCTGCCA+TGG | 0.530914 | 4_4:+79490306 | Msa0706500:intron |
TAACATTTGAAGCTTTCCTA+AGG | 0.531683 | 4_4:-79492977 | None:intergenic |
GGTATTGTACAGCCCGATTG+AGG | 0.540160 | 4_4:+79487720 | Msa0706500:CDS |
ATCTCCAATATATCATTGAC+CGG | 0.542724 | 4_4:+79493665 | Msa0706500:CDS |
CTGATTTAGTCAGTTCTGGA+AGG | 0.544771 | 4_4:+79492171 | Msa0706500:CDS |
TGATATATTGGAGATCCCTT+CGG | 0.546542 | 4_4:-79493657 | None:intergenic |
TGATTTAGTCAGTTCTGGAA+GGG | 0.550208 | 4_4:+79492172 | Msa0706500:CDS |
GCAAAGTCATACAGTGTGGC+TGG | 0.551315 | 4_4:+79492898 | Msa0706500:CDS |
GATGTTTATGAGTCTGCTGT+GGG | 0.553817 | 4_4:+79493875 | Msa0706500:CDS |
TATTCAAAATAGGATGAAGA+AGG | 0.553984 | 4_4:+79494012 | Msa0706500:CDS |
AGAGAATCAATCATCTGCCA+TGG | 0.554301 | 4_4:+79487304 | Msa0706500:CDS |
ACGCAAGGTCCAGCACAATC+GGG | 0.554921 | 4_4:-79493967 | None:intergenic |
TTTGTGTCGTGAGCGGGTTG+AGG | 0.555876 | 4_4:+79490011 | Msa0706500:CDS |
GTACCAGGCTGCCATGGCTG+AGG | 0.557385 | 4_4:+79490312 | Msa0706500:intron |
GCAATTGCCTGGAAAGCTGG+GGG | 0.559921 | 4_4:-79493938 | None:intergenic |
ATCAGGACACAACTCGGAGT+CGG | 0.561098 | 4_4:+79486987 | Msa0706500:five_prime_UTR |
TTTCTTGAAACCGATGACGC+GGG | 0.564639 | 4_4:+79494117 | Msa0706500:three_prime_UTR |
GCCAATGTTTAGTAGTTCAG+AGG | 0.565196 | 4_4:-79490091 | None:intergenic |
AAGAAGGACAAAAGAGCAAA+GGG | 0.565383 | 4_4:+79494028 | Msa0706500:CDS |
AACCCTAAAACAAATTGCAT+CGG | 0.567650 | 4_4:+79486963 | None:intergenic |
ATACAGTGTGGCTGGAAAGA+GGG | 0.567964 | 4_4:+79492906 | Msa0706500:CDS |
GGCAATTGCCTGGAAAGCTG+GGG | 0.568944 | 4_4:-79493939 | None:intergenic |
CAGTTGTATAGAACATGCAT+TGG | 0.572812 | 4_4:+79493598 | Msa0706500:CDS |
ATAATCAATGTTCAAAATTG+GGG | 0.574485 | 4_4:-79494291 | None:intergenic |
GTTCTATACAACTGTTAGAA+CGG | 0.575188 | 4_4:-79493589 | None:intergenic |
TGGGGATCATGGAGGAGAAG+AGG | 0.577029 | 4_4:+79493618 | Msa0706500:CDS |
GAATACAGCCTCTAGCATCA+TGG | 0.586389 | 4_4:-79491675 | None:intergenic |
TCTGCATACCATGATGCTAG+AGG | 0.587070 | 4_4:+79491667 | Msa0706500:CDS |
TAGGACATCTTTGGAAGCTG+AGG | 0.588289 | 4_4:+79489100 | Msa0706500:CDS |
TTTCGGATCATCGACTTCCA+TGG | 0.588879 | 4_4:-79487321 | None:intergenic |
GCAAGATCAGAACTGGGATG+TGG | 0.590766 | 4_4:+79489682 | Msa0706500:CDS |
ATGCAGCATGGTTTGCGTCA+CGG | 0.594530 | 4_4:+79487542 | Msa0706500:CDS |
GAGAGCTTGGAGTCATGCCA+TGG | 0.598852 | 4_4:+79488956 | Msa0706500:CDS |
CTAAACATTGGCGATATGGA+AGG | 0.599650 | 4_4:+79490102 | Msa0706500:CDS |
GCCTCTGAACTACTAAACAT+TGG | 0.599852 | 4_4:+79490090 | Msa0706500:CDS |
GGTTGCGCAAGGCAGTAAAG+TGG | 0.604150 | 4_4:+79489036 | Msa0706500:CDS |
ATCGGAATCAGGACACAACT+CGG | 0.604445 | 4_4:+79486981 | Msa0706500:five_prime_UTR |
AAGCCAATGAAATTCTGTCA+TGG | 0.604976 | 4_4:-79490356 | None:intergenic |
CTCAAGAGAATATCTCCGAA+GGG | 0.608613 | 4_4:+79493642 | Msa0706500:CDS |
GAAGAAGGACAAAAGAGCAA+AGG | 0.610571 | 4_4:+79494027 | Msa0706500:CDS |
ACTCAAGAGAATATCTCCGA+AGG | 0.611069 | 4_4:+79493641 | Msa0706500:CDS |
CGGTATCCAGAAAATCATCA+AGG | 0.614471 | 4_4:+79487051 | Msa0706500:five_prime_UTR |
TCATGTGATTCTCTATTCGG+CGG | 0.614718 | 4_4:+79488932 | Msa0706500:CDS |
GCTTACGAGTCCTATATGAA+GGG | 0.614942 | 4_4:+79489644 | Msa0706500:CDS |
ATTCGATAGTGTTATACGCA+AGG | 0.621387 | 4_4:-79493982 | None:intergenic |
AACGAATCTATCTGATTGGT+AGG | 0.622250 | 4_4:+79489015 | Msa0706500:CDS |
AAATCTTTGAAGTTTACCCA+CGG | 0.622381 | 4_4:+79487752 | Msa0706500:CDS |
ATTGTACAGCCCGATTGAGG+AGG | 0.626640 | 4_4:+79487723 | Msa0706500:CDS |
TCTGATTGGTAGGTTGCGCA+AGG | 0.628782 | 4_4:+79489025 | Msa0706500:CDS |
GTTGCGCAAGGCAGTAAAGT+GGG | 0.628797 | 4_4:+79489037 | Msa0706500:CDS |
ACGGAGATTACACTCGCTAT+CGG | 0.630014 | 4_4:+79487561 | Msa0706500:CDS |
CGGAAGTGAACTGAACTCGC+CGG | 0.630741 | 4_4:+79487007 | Msa0706500:five_prime_UTR |
CCCGTCAATTAAAACTACAA+AGG | 0.633528 | 4_4:-79494356 | None:intergenic |
AAATCAGCACAAATGCAGCA+TGG | 0.634136 | 4_4:+79487530 | Msa0706500:CDS |
CATCTCATAATTCTCAACAA+AGG | 0.635370 | 4_4:-79494142 | None:intergenic |
ATTTCTTGAAACCGATGACG+CGG | 0.647556 | 4_4:+79494116 | Msa0706500:three_prime_UTR |
ATTTAACAGGGCTGTATACG+AGG | 0.648075 | 4_4:+79489954 | Msa0706500:intron |
AATATCAAATGCCAAAACAA+GGG | 0.652385 | 4_4:+79490393 | Msa0706500:CDS |
AGTGTGAAAGATGATTTGAA+TGG | 0.655868 | 4_4:+79491828 | Msa0706500:CDS |
CTTACGAGTCCTATATGAAG+GGG | 0.656319 | 4_4:+79489645 | Msa0706500:CDS |
CTTGGCAGAAAATATTTCAG+CGG | 0.661052 | 4_4:+79491612 | Msa0706500:CDS |
CAATTGCCTGGAAAGCTGGG+GGG | 0.661981 | 4_4:-79493937 | None:intergenic |
ATCGCAGCGGAATTTGACGC+CGG | 0.668025 | 4_4:+79487031 | Msa0706500:five_prime_UTR |
AGATATTTGGAAATTTACAG+CGG | 0.668791 | 4_4:+79494189 | Msa0706500:three_prime_UTR |
TATCATTGACCGGAGCTGAG+CGG | 0.688933 | 4_4:+79493675 | Msa0706500:CDS |
TGAACTCGCCGGAATCGCAG+CGG | 0.693161 | 4_4:+79487018 | Msa0706500:five_prime_UTR |
ACATGCATTGGGGATCATGG+AGG | 0.704917 | 4_4:+79493610 | Msa0706500:CDS |
GAGCTGGAGAAAGATATCCA+TGG | 0.711540 | 4_4:+79491586 | Msa0706500:CDS |
GTTTGAGCAAGATCAGAACT+GGG | 0.716721 | 4_4:+79489676 | Msa0706500:CDS |
AAGGACAAAAGAGCAAAGGG+TGG | 0.733205 | 4_4:+79494031 | Msa0706500:CDS |
GTTGTATAGAACATGCATTG+GGG | 0.748586 | 4_4:+79493600 | Msa0706500:CDS |
TGTTGCAAAGTCATACAGTG+TGG | 0.777758 | 4_4:+79492894 | Msa0706500:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATATATATATATTTTTT+GGG | + | chr4_4:79494322-79494341 | Msa0706500:three_prime_UTR | 0.0% |
!!! | ATTTTTAAAAAAAAGGAAAA+AGG | - | chr4_4:79488797-79488816 | None:intergenic | 10.0% |
!!! | GTAAAACATTTTTAAAAAAA+AGG | - | chr4_4:79488804-79488823 | None:intergenic | 10.0% |
!! | CTATTAAATTGAAAAAAAAA+AGG | + | chr4_4:79490460-79490479 | Msa0706500:intron | 10.0% |
!! | TAAATATATGCTAAAAATAT+TGG | + | chr4_4:79490680-79490699 | Msa0706500:intron | 10.0% |
!!! | AAATAAACTTTTCATTTTTC+TGG | + | chr4_4:79488842-79488861 | Msa0706500:intron | 15.0% |
!! | TAGATTAAAATAGTAGAAAA+GGG | - | chr4_4:79489556-79489575 | None:intergenic | 15.0% |
!! | ATAGATTAAAATAGTAGAAA+AGG | - | chr4_4:79489557-79489576 | None:intergenic | 15.0% |
!!! | TTTTCTACTATTTTAATCTA+TGG | + | chr4_4:79489556-79489575 | Msa0706500:intron | 15.0% |
!! | AAGTCAAATATTATAAATCA+AGG | - | chr4_4:79489750-79489769 | None:intergenic | 15.0% |
!! | TTGATTTATAATATTTGACT+TGG | + | chr4_4:79489749-79489768 | Msa0706500:intron | 15.0% |
!! | TAACAAATATATTATGTGTA+TGG | - | chr4_4:79490948-79490967 | None:intergenic | 15.0% |
!!! | ACATAATATATTTGTTAATG+TGG | + | chr4_4:79490951-79490970 | Msa0706500:intron | 15.0% |
!! | AAATCCAAAAAAGAAAAAAA+TGG | - | chr4_4:79491435-79491454 | None:intergenic | 15.0% |
!!! | TTTTACAGAAGTTAAAAATT+TGG | - | chr4_4:79492387-79492406 | None:intergenic | 15.0% |
!!! | AAATAAAAAACTCTAAAGAT+GGG | - | chr4_4:79492487-79492506 | None:intergenic | 15.0% |
!!! | TAAATAAAAAACTCTAAAGA+TGG | - | chr4_4:79492488-79492507 | None:intergenic | 15.0% |
!!! | AGTTATTTTTTAAGATCAAA+TGG | + | chr4_4:79493023-79493042 | Msa0706500:intron | 15.0% |
!!! | GATTTTTCAAATGATTTTTT+TGG | + | chr4_4:79493067-79493086 | Msa0706500:intron | 15.0% |
!! | CATGTATAAATTTCACTAAT+TGG | + | chr4_4:79487137-79487156 | Msa0706500:intron | 20.0% |
!! | TTGAATTATTGAAGACTTAA+TGG | + | chr4_4:79487277-79487296 | Msa0706500:intron | 20.0% |
!! | TGAATTATTGAAGACTTAAT+GGG | + | chr4_4:79487278-79487297 | Msa0706500:intron | 20.0% |
!! | TTAATCGTTAGTAAAAGAAA+CGG | - | chr4_4:79487425-79487444 | None:intergenic | 20.0% |
!! | TATAGAATTCAAACGTTATA+CGG | - | chr4_4:79487660-79487679 | None:intergenic | 20.0% |
!! | AAAAAAAGGAAAAAGGAAAA+AGG | - | chr4_4:79488790-79488809 | None:intergenic | 20.0% |
!! | AAAAAATATTACCAAAAGAG+AGG | - | chr4_4:79489256-79489275 | None:intergenic | 20.0% |
!!! | TTCATTACAACTTCTTTTAA+AGG | - | chr4_4:79489447-79489466 | None:intergenic | 20.0% |
!!! | GAATAGAAAAAAAAGTTGAT+TGG | + | chr4_4:79489511-79489530 | Msa0706500:intron | 20.0% |
!! | TATAACTTACTTGAAGAAAA+GGG | + | chr4_4:79490179-79490198 | Msa0706500:intron | 20.0% |
!!! | AACTTCATCTTTTTTAAGTT+TGG | - | chr4_4:79490497-79490516 | None:intergenic | 20.0% |
!! | AAATTCAATTTAACACCAAA+AGG | - | chr4_4:79490898-79490917 | None:intergenic | 20.0% |
!! | TATATTATGTGTATGGATTT+AGG | - | chr4_4:79490941-79490960 | None:intergenic | 20.0% |
!!! | AAAAAATTGTTAGTTTCCTT+TGG | - | chr4_4:79491013-79491032 | None:intergenic | 20.0% |
!!! | AAAAAAATGTTAGTTTCCTT+TGG | - | chr4_4:79491151-79491170 | None:intergenic | 20.0% |
!! | TTACATTGTCAAGATTTAAT+TGG | + | chr4_4:79491218-79491237 | Msa0706500:intron | 20.0% |
!!! | ACTACCATTTTTTTCTTTTT+TGG | + | chr4_4:79491428-79491447 | Msa0706500:intron | 20.0% |
!!! | TTTTAACAGATGATGATTAT+AGG | + | chr4_4:79492512-79492531 | Msa0706500:intron | 20.0% |
!! | AGAAGATTATAAGAAACAAA+GGG | - | chr4_4:79493378-79493397 | None:intergenic | 20.0% |
!! | TAGAAGATTATAAGAAACAA+AGG | - | chr4_4:79493379-79493398 | None:intergenic | 20.0% |
!!! | ATTTCTTTTCCTTTTCAATT+TGG | + | chr4_4:79493525-79493544 | Msa0706500:intron | 20.0% |
!!! | TGTACTTTTCAACAAAAAAA+AGG | - | chr4_4:79494245-79494264 | None:intergenic | 20.0% |
!! | ATAATCAATGTTCAAAATTG+GGG | - | chr4_4:79494294-79494313 | None:intergenic | 20.0% |
!! | CATAATCAATGTTCAAAATT+GGG | - | chr4_4:79494295-79494314 | None:intergenic | 20.0% |
!! | TCATAATCAATGTTCAAAAT+TGG | - | chr4_4:79494296-79494315 | None:intergenic | 20.0% |
!!! | AAATTGAAGATTGATTTGAG+AGG | - | chr4_4:79487192-79487211 | None:intergenic | 25.0% |
!! | AAAATTAGATCTAGCATTGA+TGG | - | chr4_4:79487221-79487240 | None:intergenic | 25.0% |
! | ATCAATGACATTTCAAAAGA+CGG | - | chr4_4:79487632-79487651 | None:intergenic | 25.0% |
! | AACGTTTGAATTCTATAGAT+TGG | + | chr4_4:79487663-79487682 | Msa0706500:intron | 25.0% |
!!! | AAGAATGATTTGGTTTCAAT+TGG | + | chr4_4:79487931-79487950 | Msa0706500:intron | 25.0% |
! | AATGGAAAAACATCTAAAAG+TGG | - | chr4_4:79488679-79488698 | None:intergenic | 25.0% |
! | TAAATGATGATTTCGTATCA+AGG | - | chr4_4:79488752-79488771 | None:intergenic | 25.0% |
! | TTGATACGAAATCATCATTT+AGG | + | chr4_4:79488751-79488770 | Msa0706500:intron | 25.0% |
!!! | TGGAATTTACTTTTGAATTC+AGG | + | chr4_4:79488904-79488923 | Msa0706500:intron | 25.0% |
!!! | TTTGTTTTCACAATTTTGTG+CGG | + | chr4_4:79489064-79489083 | Msa0706500:CDS | 25.0% |
! | TTAATCAGTATTGCAACAAA+AGG | + | chr4_4:79489131-79489150 | Msa0706500:intron | 25.0% |
! | CCATTTGATGTAAATAACAA+TGG | - | chr4_4:79489174-79489193 | None:intergenic | 25.0% |
!!! | CCATTGTTATTTACATCAAA+TGG | + | chr4_4:79489171-79489190 | Msa0706500:intron | 25.0% |
! | TTAATGCTTAGAGTTATTGT+TGG | + | chr4_4:79489340-79489359 | Msa0706500:intron | 25.0% |
!!! | ATAATATTTGACTTGGAGAA+AGG | + | chr4_4:79489756-79489775 | Msa0706500:intron | 25.0% |
!!! | TAATATTTGACTTGGAGAAA+GGG | + | chr4_4:79489757-79489776 | Msa0706500:intron | 25.0% |
! | TTACACAATAAACAAGTGTT+TGG | - | chr4_4:79489864-79489883 | None:intergenic | 25.0% |
! | GTATAACTTACTTGAAGAAA+AGG | + | chr4_4:79490178-79490197 | Msa0706500:intron | 25.0% |
! | CATTTGATATTGGAAATCTA+TGG | - | chr4_4:79490384-79490403 | None:intergenic | 25.0% |
! | AATATCAAATGCCAAAACAA+GGG | + | chr4_4:79490393-79490412 | Msa0706500:CDS | 25.0% |
!!! | TTTTGGAATCTTTTTCTTTC+TGG | + | chr4_4:79490593-79490612 | Msa0706500:intron | 25.0% |
!!! | TTTGGAATCTTTTTCTTTCT+GGG | + | chr4_4:79490594-79490613 | Msa0706500:intron | 25.0% |
! | AAATTGTTAGTTAACTCATG+TGG | + | chr4_4:79490978-79490997 | Msa0706500:intron | 25.0% |
! | TTCATGAATCACAAACATAA+GGG | - | chr4_4:79491404-79491423 | None:intergenic | 25.0% |
! | ATTCATGAATCACAAACATA+AGG | - | chr4_4:79491405-79491424 | None:intergenic | 25.0% |
!! | TTTATTCTTCTGTGCATTTT+AGG | + | chr4_4:79491785-79491804 | Msa0706500:intron | 25.0% |
! | ACAAATTATCATTCCATTTG+AGG | - | chr4_4:79492114-79492133 | None:intergenic | 25.0% |
! | GGAAGCAAATAAATTAAGAA+GGG | - | chr4_4:79492310-79492329 | None:intergenic | 25.0% |
! | AGGAAGCAAATAAATTAAGA+AGG | - | chr4_4:79492311-79492330 | None:intergenic | 25.0% |
! | CATTTGAAAAATCAACAAAC+AGG | - | chr4_4:79493060-79493079 | None:intergenic | 25.0% |
!!! | TTCAAATGATTTTTTTGGTC+TGG | + | chr4_4:79493072-79493091 | Msa0706500:intron | 25.0% |
! | GAAGGAGATCATAATATAAA+AGG | - | chr4_4:79493222-79493241 | None:intergenic | 25.0% |
! | AATTCCCAGATATTCAAAAT+AGG | + | chr4_4:79494002-79494021 | Msa0706500:CDS | 25.0% |
!!! | TCATCCTATTTTGAATATCT+GGG | - | chr4_4:79494009-79494028 | None:intergenic | 25.0% |
!!! | TTCATCCTATTTTGAATATC+TGG | - | chr4_4:79494010-79494029 | None:intergenic | 25.0% |
! | TATTCAAAATAGGATGAAGA+AGG | + | chr4_4:79494012-79494031 | Msa0706500:CDS | 25.0% |
! | GTAAATTTCCAAATATCTCT+AGG | - | chr4_4:79494187-79494206 | None:intergenic | 25.0% |
! | AGATATTTGGAAATTTACAG+CGG | + | chr4_4:79494189-79494208 | Msa0706500:three_prime_UTR | 25.0% |
!! | ATATTTAAAAACTGATGACG+TGG | + | chr4_4:79494216-79494235 | Msa0706500:three_prime_UTR | 25.0% |
!! | TATTTAAAAACTGATGACGT+GGG | + | chr4_4:79494217-79494236 | Msa0706500:three_prime_UTR | 25.0% |
!! | TGAATACCTTGATGATTTTC+TGG | - | chr4_4:79487060-79487079 | None:intergenic | 30.0% |
! | TGATCAGAATTGGTTGATTT+CGG | - | chr4_4:79487341-79487360 | None:intergenic | 30.0% |
AAACCAGTGATTGAGAATTT+GGG | - | chr4_4:79487371-79487390 | None:intergenic | 30.0% | |
! | ACTTTTTACATTGACACTGT+AGG | + | chr4_4:79487696-79487715 | Msa0706500:intron | 30.0% |
ATTTATACAACCTCCTCAAT+CGG | - | chr4_4:79487736-79487755 | None:intergenic | 30.0% | |
!! | AAATCTTTGAAGTTTACCCA+CGG | + | chr4_4:79487752-79487771 | Msa0706500:CDS | 30.0% |
GAGTGTTAGAAAGAATGATT+TGG | + | chr4_4:79487921-79487940 | Msa0706500:intron | 30.0% | |
TAATTCGATAGCAATGAAGA+TGG | - | chr4_4:79487970-79487989 | None:intergenic | 30.0% | |
TTAACAATCTACACTCTACA+GGG | - | chr4_4:79488195-79488214 | None:intergenic | 30.0% | |
TGTAGATTGTTAAGATGAGT+TGG | + | chr4_4:79488202-79488221 | Msa0706500:intron | 30.0% | |
GTAGATTGTTAAGATGAGTT+GGG | + | chr4_4:79488203-79488222 | Msa0706500:intron | 30.0% | |
! | TTTTGTTAAAAGTCCCACAT+TGG | + | chr4_4:79488354-79488373 | Msa0706500:intron | 30.0% |
TATACTTGGCCTAATCTATA+GGG | - | chr4_4:79488427-79488446 | None:intergenic | 30.0% | |
TTATACTTGGCCTAATCTAT+AGG | - | chr4_4:79488428-79488447 | None:intergenic | 30.0% | |
TCTACTTATTTGTCAGTACT+GGG | - | chr4_4:79488454-79488473 | None:intergenic | 30.0% | |
ATCTACTTATTTGTCAGTAC+TGG | - | chr4_4:79488455-79488474 | None:intergenic | 30.0% | |
! | TAGGATGTTTGTTGGAAAAT+GGG | - | chr4_4:79488536-79488555 | None:intergenic | 30.0% |
! | TTAGGATGTTTGTTGGAAAA+TGG | - | chr4_4:79488537-79488556 | None:intergenic | 30.0% |
TTATCGCAAAAAGCAGTATT+AGG | - | chr4_4:79488555-79488574 | None:intergenic | 30.0% | |
TGAAATGTACGTGATAGAAA+TGG | - | chr4_4:79488697-79488716 | None:intergenic | 30.0% | |
! | AAATCATCATTTAGGCCTTT+TGG | + | chr4_4:79488759-79488778 | Msa0706500:intron | 30.0% |
TCTTCATGTGATTCTCTATT+CGG | + | chr4_4:79488929-79488948 | Msa0706500:CDS | 30.0% | |
!!! | TTTATTTTGCTGATGAAGCA+TGG | + | chr4_4:79489588-79489607 | Msa0706500:intron | 30.0% |
AATCAGTGAACAAATGAAAG+AGG | - | chr4_4:79489619-79489638 | None:intergenic | 30.0% | |
!!! | TCATTTGTTCACTGATTTTC+AGG | + | chr4_4:79489622-79489641 | Msa0706500:intron | 30.0% |
AGAAAGGGAAAAAAATATGC+AGG | + | chr4_4:79489772-79489791 | Msa0706500:intron | 30.0% | |
TAACCATGATCCTATTTAAC+AGG | + | chr4_4:79489941-79489960 | Msa0706500:intron | 30.0% | |
AACCATGATCCTATTTAACA+GGG | + | chr4_4:79489942-79489961 | Msa0706500:intron | 30.0% | |
!! | CCTCTAGTTTAGCTTTAAAA+AGG | - | chr4_4:79490140-79490159 | None:intergenic | 30.0% |
!!! | CCTTTTTAAAGCTAAACTAG+AGG | + | chr4_4:79490137-79490156 | Msa0706500:CDS | 30.0% |
! | TTTAAAGCTAAACTAGAGGT+TGG | + | chr4_4:79490141-79490160 | Msa0706500:intron | 30.0% |
TACTTGAAGAAAAGGGAAAA+TGG | + | chr4_4:79490186-79490205 | Msa0706500:intron | 30.0% | |
ACTTGAAGAAAAGGGAAAAT+GGG | + | chr4_4:79490187-79490206 | Msa0706500:intron | 30.0% | |
!!! | CTTGTTTTGGCATTTGATAT+TGG | - | chr4_4:79490394-79490413 | None:intergenic | 30.0% |
CAATATCAAATGCCAAAACA+AGG | + | chr4_4:79490392-79490411 | Msa0706500:CDS | 30.0% | |
AAGATACCAACCTTTCAAAA+TGG | - | chr4_4:79490422-79490441 | None:intergenic | 30.0% | |
! | GTAAAATGGCATTTCTGTTT+TGG | + | chr4_4:79490576-79490595 | Msa0706500:intron | 30.0% |
AAATATTGGTGTGAAGAACA+TGG | + | chr4_4:79490694-79490713 | Msa0706500:intron | 30.0% | |
AACAAATTCAAGAGTTAGGT+TGG | - | chr4_4:79491176-79491195 | None:intergenic | 30.0% | |
TTGCAACAAATTCAAGAGTT+AGG | - | chr4_4:79491180-79491199 | None:intergenic | 30.0% | |
CATAGCATGTTTGAATTGTT+AGG | - | chr4_4:79491320-79491339 | None:intergenic | 30.0% | |
ACATGCTATGTAGTATCAAA+AGG | + | chr4_4:79491330-79491349 | Msa0706500:intron | 30.0% | |
CATGCTATGTAGTATCAAAA+GGG | + | chr4_4:79491331-79491350 | Msa0706500:intron | 30.0% | |
ATGCTATGTAGTATCAAAAG+GGG | + | chr4_4:79491332-79491351 | Msa0706500:intron | 30.0% | |
AGTGTGAAAGATGATTTGAA+TGG | + | chr4_4:79491828-79491847 | Msa0706500:CDS | 30.0% | |
! | TGATTTGAATGGTCTTGATA+AGG | + | chr4_4:79491839-79491858 | Msa0706500:CDS | 30.0% |
AAAAAAAAACAGCAGCTTTG+AGG | - | chr4_4:79492076-79492095 | None:intergenic | 30.0% | |
ATTTGAGGAGCTAATGTTAA+AGG | - | chr4_4:79492099-79492118 | None:intergenic | 30.0% | |
TTTAACATTAGCTCCTCAAA+TGG | + | chr4_4:79492098-79492117 | Msa0706500:intron | 30.0% | |
GCAAAAGCTGAAAATAACAA+GGG | - | chr4_4:79492358-79492377 | None:intergenic | 30.0% | |
AGCAAAAGCTGAAAATAACA+AGG | - | chr4_4:79492359-79492378 | None:intergenic | 30.0% | |
!!! | TTGTTATTTTCAGCTTTTGC+TGG | + | chr4_4:79492358-79492377 | Msa0706500:intron | 30.0% |
TTTGTATACCGATAGCATTT+AGG | + | chr4_4:79492413-79492432 | Msa0706500:intron | 30.0% | |
TGAACTTTCCTAAATGCTAT+CGG | - | chr4_4:79492424-79492443 | None:intergenic | 30.0% | |
TCTTATTGGATGAATAGAGT+CGG | + | chr4_4:79492601-79492620 | Msa0706500:intron | 30.0% | |
! | ATGTATACCTTTAGTTTAGG+TGG | - | chr4_4:79492846-79492865 | None:intergenic | 30.0% |
! | AGCATGTATACCTTTAGTTT+AGG | - | chr4_4:79492849-79492868 | None:intergenic | 30.0% |
! | TAACATTTGAAGCTTTCCTA+AGG | - | chr4_4:79492980-79492999 | None:intergenic | 30.0% |
AATGTTAGATGGCAATAGTA+AGG | + | chr4_4:79492993-79493012 | Msa0706500:CDS | 30.0% | |
GTTTCAATGTTATGGAAGTT+AGG | - | chr4_4:79493134-79493153 | None:intergenic | 30.0% | |
TAACAAGCGTTTCAATGTTA+TGG | - | chr4_4:79493142-79493161 | None:intergenic | 30.0% | |
! | TGAAATCAATTGTTGTTGAC+TGG | + | chr4_4:79493179-79493198 | Msa0706500:intron | 30.0% |
! | GAAATCAATTGTTGTTGACT+GGG | + | chr4_4:79493180-79493199 | Msa0706500:intron | 30.0% |
TATTATGATCTCCTTCAATC+AGG | + | chr4_4:79493226-79493245 | Msa0706500:intron | 30.0% | |
ACCTAAAGATGGTAATCTAT+CGG | + | chr4_4:79493256-79493275 | Msa0706500:intron | 30.0% | |
GATTATAAGAAACAAAGGGA+AGG | - | chr4_4:79493374-79493393 | None:intergenic | 30.0% | |
GTTCTATACAACTGTTAGAA+CGG | - | chr4_4:79493592-79493611 | None:intergenic | 30.0% | |
AGTTGTATAGAACATGCATT+GGG | + | chr4_4:79493599-79493618 | Msa0706500:CDS | 30.0% | |
ATCTCCAATATATCATTGAC+CGG | + | chr4_4:79493665-79493684 | Msa0706500:CDS | 30.0% | |
!!! | TCCTATGCTATTTTTTTGAG+CGG | + | chr4_4:79493717-79493736 | Msa0706500:intron | 30.0% |
AAACATCAAGTTTCTCCAAT+AGG | - | chr4_4:79493862-79493881 | None:intergenic | 30.0% | |
! | GGCTTTATAAGCAGAATATT+TGG | + | chr4_4:79494052-79494071 | Msa0706500:CDS | 30.0% |
AGCATATTTGATTCAGTGTT+TGG | + | chr4_4:79494078-79494097 | Msa0706500:exon | 30.0% | |
CATCTCATAATTCTCAACAA+AGG | - | chr4_4:79494145-79494164 | None:intergenic | 30.0% | |
AAAACTACAAAGGCAACTAT+TGG | - | chr4_4:79494349-79494368 | None:intergenic | 30.0% | |
!!! | GCCTTTGTAGTTTTAATTGA+CGG | + | chr4_4:79494355-79494374 | Msa0706500:three_prime_UTR | 30.0% |
!!! | CCTTTGTAGTTTTAATTGAC+GGG | + | chr4_4:79494356-79494375 | Msa0706500:three_prime_UTR | 30.0% |
!!! | CTTTGTAGTTTTAATTGACG+GGG | + | chr4_4:79494357-79494376 | Msa0706500:three_prime_UTR | 30.0% |
!!! | TTTGTAGTTTTAATTGACGG+GGG | + | chr4_4:79494358-79494377 | Msa0706500:three_prime_UTR | 30.0% |
AAACAAATTGCATCGGAATC+AGG | + | chr4_4:79486970-79486989 | Msa0706500:five_prime_UTR | 35.0% | |
!! | CTTGATGATTTTCTGGATAC+CGG | - | chr4_4:79487053-79487072 | None:intergenic | 35.0% |
AACTACAACAATGACAGATC+TGG | - | chr4_4:79487168-79487187 | None:intergenic | 35.0% | |
CAAACCAGTGATTGAGAATT+TGG | - | chr4_4:79487372-79487391 | None:intergenic | 35.0% | |
! | TTTTACATTGACACTGTAGG+AGG | + | chr4_4:79487699-79487718 | Msa0706500:intron | 35.0% |
TTTATACAACCTCCTCAATC+GGG | - | chr4_4:79487735-79487754 | None:intergenic | 35.0% | |
AGTGACATTAGACTCAGTTA+AGG | - | chr4_4:79487801-79487820 | None:intergenic | 35.0% | |
AGTCTAATGTCACTGAAGTA+AGG | + | chr4_4:79487807-79487826 | Msa0706500:CDS | 35.0% | |
TGAAATTGTGTTACCGAAGA+AGG | + | chr4_4:79487895-79487914 | Msa0706500:intron | 35.0% | |
TCTAACACTCTTTCCTTCTT+CGG | - | chr4_4:79487911-79487930 | None:intergenic | 35.0% | |
! | TTTGGTTTCAATTGGCTGTT+AGG | + | chr4_4:79487939-79487958 | Msa0706500:intron | 35.0% |
ATGTGTCCTCTTAAGACTTA+CGG | + | chr4_4:79487993-79488012 | Msa0706500:intron | 35.0% | |
GACTAGAGCTAAATAGTAGT+AGG | + | chr4_4:79488017-79488036 | Msa0706500:intron | 35.0% | |
AGCTAAATAGTAGTAGGCTA+GGG | + | chr4_4:79488023-79488042 | Msa0706500:intron | 35.0% | |
ACCTAAGAAAATGGAATCCA+TGG | + | chr4_4:79488156-79488175 | Msa0706500:intron | 35.0% | |
CCTAAGAAAATGGAATCCAT+GGG | + | chr4_4:79488157-79488176 | Msa0706500:intron | 35.0% | |
CTTAACAATCTACACTCTAC+AGG | - | chr4_4:79488196-79488215 | None:intergenic | 35.0% | |
! | AGAGAAGATAACTTTAGGGA+GGG | - | chr4_4:79488494-79488513 | None:intergenic | 35.0% |
GCAGAGAGAAGATAACTTTA+GGG | - | chr4_4:79488498-79488517 | None:intergenic | 35.0% | |
AGCAGTATTAGGATGTTTGT+TGG | - | chr4_4:79488544-79488563 | None:intergenic | 35.0% | |
TCTAAGAGTTCAAAGCTGAA+TGG | + | chr4_4:79488598-79488617 | Msa0706500:intron | 35.0% | |
ATGATGATTTCGTATCAAGG+CGG | - | chr4_4:79488749-79488768 | None:intergenic | 35.0% | |
AGGAAAAAGGACAAACCAAA+AGG | - | chr4_4:79488777-79488796 | None:intergenic | 35.0% | |
TATCTACACATGCTTAACAG+TGG | + | chr4_4:79488878-79488897 | Msa0706500:intron | 35.0% | |
TAGATTCGTTGAGATGCATT+TGG | - | chr4_4:79489005-79489024 | None:intergenic | 35.0% | |
TCTCAACGAATCTATCTGAT+TGG | + | chr4_4:79489011-79489030 | Msa0706500:CDS | 35.0% | |
AACGAATCTATCTGATTGGT+AGG | + | chr4_4:79489015-79489034 | Msa0706500:CDS | 35.0% | |
TATTACCAAAAGAGAGGAGT+GGG | - | chr4_4:79489250-79489269 | None:intergenic | 35.0% | |
ATATTACCAAAAGAGAGGAG+TGG | - | chr4_4:79489251-79489270 | None:intergenic | 35.0% | |
! | TTGTTGGATTTGTTCCTTTC+CGG | + | chr4_4:79489356-79489375 | Msa0706500:intron | 35.0% |
TGTATCAGATTATACCGGAA+AGG | - | chr4_4:79489373-79489392 | None:intergenic | 35.0% | |
TGCTCTGTATCAGATTATAC+CGG | - | chr4_4:79489378-79489397 | None:intergenic | 35.0% | |
CATGTAATGCTCTGTATCAA+AGG | - | chr4_4:79489416-79489435 | None:intergenic | 35.0% | |
!! | TAAAGCACTTCAAAAGTGCT+AGG | + | chr4_4:79489708-79489727 | Msa0706500:CDS | 35.0% |
TCATGGTTAAAAACTCGACA+GGG | - | chr4_4:79489930-79489949 | None:intergenic | 35.0% | |
ATCATGGTTAAAAACTCGAC+AGG | - | chr4_4:79489931-79489950 | None:intergenic | 35.0% | |
GTTAGGGAAATATGGAGATT+TGG | + | chr4_4:79489978-79489997 | Msa0706500:CDS | 35.0% | |
AGATACTGCCTTCACAAAAT+TGG | + | chr4_4:79490051-79490070 | Msa0706500:CDS | 35.0% | |
ACTACTAAACATTGGCGATA+TGG | + | chr4_4:79490098-79490117 | Msa0706500:CDS | 35.0% | |
!! | GCTTTAAAAAGGTCTAATGC+AGG | - | chr4_4:79490129-79490148 | None:intergenic | 35.0% |
GATAACTTAGTGTTTGTACC+AGG | + | chr4_4:79490297-79490316 | Msa0706500:intron | 35.0% | |
CTTCCATGACAGAATTTCAT+TGG | + | chr4_4:79490353-79490372 | Msa0706500:CDS | 35.0% | |
AAGCCAATGAAATTCTGTCA+TGG | - | chr4_4:79490359-79490378 | None:intergenic | 35.0% | |
! | ATGACAGAATTTCATTGGCT+TGG | + | chr4_4:79490358-79490377 | Msa0706500:CDS | 35.0% |
!!! | GAAATGCCATTTTACAGCAT+GGG | - | chr4_4:79490571-79490590 | None:intergenic | 35.0% |
!!! | AGAAATGCCATTTTACAGCA+TGG | - | chr4_4:79490572-79490591 | None:intergenic | 35.0% |
ATGTTCTTCACACCAATAGA+GGG | - | chr4_4:79490725-79490744 | None:intergenic | 35.0% | |
ACAAATATTTCTCTGATCCC+TGG | + | chr4_4:79490819-79490838 | Msa0706500:intron | 35.0% | |
AAGTAAAATCCACTAGTCCA+GGG | - | chr4_4:79490839-79490858 | None:intergenic | 35.0% | |
!! | AGTGGATTTTACTTCTGACT+TGG | + | chr4_4:79490845-79490864 | Msa0706500:intron | 35.0% |
!! | TAACACCAAAAGGAGCATTA+TGG | - | chr4_4:79490888-79490907 | None:intergenic | 35.0% |
TTGCAACAAATTCAAGAGCT+AGG | - | chr4_4:79491040-79491059 | None:intergenic | 35.0% | |
! | CTGAATAATTTTATCAGCCC+AGG | + | chr4_4:79491564-79491583 | Msa0706500:intron | 35.0% |
! | GCTGAAATATTTTCTGCCAA+GGG | - | chr4_4:79491613-79491632 | None:intergenic | 35.0% |
CTTGGCAGAAAATATTTCAG+CGG | + | chr4_4:79491612-79491631 | Msa0706500:CDS | 35.0% | |
CTTATATGATCTCTTGCTAC+AGG | + | chr4_4:79491992-79492011 | Msa0706500:CDS | 35.0% | |
GCAAGTTCACAAACAAAACA+TGG | - | chr4_4:79492025-79492044 | None:intergenic | 35.0% | |
CTATCTGATTTAGTCAGTTC+TGG | + | chr4_4:79492167-79492186 | Msa0706500:CDS | 35.0% | |
!! | TGATTTAGTCAGTTCTGGAA+GGG | + | chr4_4:79492172-79492191 | Msa0706500:CDS | 35.0% |
! | AGAGTGTTCATGCAAAAGTT+TGG | + | chr4_4:79492226-79492245 | Msa0706500:CDS | 35.0% |
TCCATAAATTCTACCGTGAT+GGG | - | chr4_4:79492558-79492577 | None:intergenic | 35.0% | |
TTCCATAAATTCTACCGTGA+TGG | - | chr4_4:79492559-79492578 | None:intergenic | 35.0% | |
TCACGGTAGAATTTATGGAA+AGG | + | chr4_4:79492559-79492578 | Msa0706500:intron | 35.0% | |
CTTATTGGATGAATAGAGTC+GGG | + | chr4_4:79492602-79492621 | Msa0706500:intron | 35.0% | |
GTCGGGAATAAATGTTATAG+TGG | + | chr4_4:79492619-79492638 | Msa0706500:intron | 35.0% | |
! | AAGTTTTTCTCTCCTCTCAT+AGG | + | chr4_4:79492724-79492743 | Msa0706500:intron | 35.0% |
! | AGTTTTTCTCTCCTCTCATA+GGG | + | chr4_4:79492725-79492744 | Msa0706500:intron | 35.0% |
AGTATAACCACATCTGTTTC+TGG | + | chr4_4:79492803-79492822 | Msa0706500:intron | 35.0% | |
TTAAAGTCCAGAAACAGATG+TGG | - | chr4_4:79492813-79492832 | None:intergenic | 35.0% | |
GATGTTTCCACCTAAACTAA+AGG | + | chr4_4:79492836-79492855 | Msa0706500:intron | 35.0% | |
GGAAAGCTTCAAATGTTAGA+TGG | + | chr4_4:79492982-79493001 | Msa0706500:CDS | 35.0% | |
CAATGTTATGGAAGTTAGGA+TGG | - | chr4_4:79493130-79493149 | None:intergenic | 35.0% | |
TTGATTTCACACTCAACTTC+AGG | - | chr4_4:79493168-79493187 | None:intergenic | 35.0% | |
ATTACCATCTTTAGGTCTAC+AGG | - | chr4_4:79493252-79493271 | None:intergenic | 35.0% | |
CCTAAAGATGGTAATCTATC+GGG | + | chr4_4:79493257-79493276 | Msa0706500:intron | 35.0% | |
CATAGTCTGCCAAATTGAAA+AGG | - | chr4_4:79493537-79493556 | None:intergenic | 35.0% | |
! | CTTTTCAATTTGGCAGACTA+TGG | + | chr4_4:79493535-79493554 | Msa0706500:intron | 35.0% |
GACTATGGTGAAAGAATTAG+AGG | + | chr4_4:79493550-79493569 | Msa0706500:intron | 35.0% | |
CAGTTGTATAGAACATGCAT+TGG | + | chr4_4:79493598-79493617 | Msa0706500:CDS | 35.0% | |
GTTGTATAGAACATGCATTG+GGG | + | chr4_4:79493600-79493619 | Msa0706500:CDS | 35.0% | |
TGATATATTGGAGATCCCTT+CGG | - | chr4_4:79493660-79493679 | None:intergenic | 35.0% | |
!!! | CCTATGCTATTTTTTTGAGC+GGG | + | chr4_4:79493718-79493737 | Msa0706500:intron | 35.0% |
GTAATCCTATCTGTTTCAGT+TGG | + | chr4_4:79493829-79493848 | Msa0706500:intron | 35.0% | |
TTTCTCCAACTGAAACAGAT+AGG | - | chr4_4:79493837-79493856 | None:intergenic | 35.0% | |
TCAGTTGGAGAAATTCCTAT+TGG | + | chr4_4:79493844-79493863 | Msa0706500:intron | 35.0% | |
ATTCGATAGTGTTATACGCA+AGG | - | chr4_4:79493985-79494004 | None:intergenic | 35.0% | |
AAGAAGGACAAAAGAGCAAA+GGG | + | chr4_4:79494028-79494047 | Msa0706500:CDS | 35.0% | |
! | TTGAGTTGCCTAGAGATATT+TGG | + | chr4_4:79494176-79494195 | Msa0706500:three_prime_UTR | 35.0% |
CCCGTCAATTAAAACTACAA+AGG | - | chr4_4:79494359-79494378 | None:intergenic | 35.0% | |
CGGTATCCAGAAAATCATCA+AGG | + | chr4_4:79487051-79487070 | Msa0706500:five_prime_UTR | 40.0% | |
AGAGAATCAATCATCTGCCA+TGG | + | chr4_4:79487304-79487323 | Msa0706500:CDS | 40.0% | |
GGGAACAATCTGATCAGAAT+TGG | - | chr4_4:79487351-79487370 | None:intergenic | 40.0% | |
GTTCCCAAATTCTCAATCAC+TGG | + | chr4_4:79487365-79487384 | Msa0706500:CDS | 40.0% | |
AAATCAGCACAAATGCAGCA+TGG | + | chr4_4:79487530-79487549 | Msa0706500:CDS | 40.0% | |
! | GTATTTTCGCTGTTGCTAAC+TGG | + | chr4_4:79487587-79487606 | Msa0706500:intron | 40.0% |
TGCATCAGAAAAGAGAGATG+CGG | - | chr4_4:79487846-79487865 | None:intergenic | 40.0% | |
TAGTCACCGTAAGTCTTAAG+AGG | - | chr4_4:79488002-79488021 | None:intergenic | 40.0% | |
GAGCTAAATAGTAGTAGGCT+AGG | + | chr4_4:79488022-79488041 | Msa0706500:intron | 40.0% | |
ATTGCAAAGCACACGTTTGT+GGG | - | chr4_4:79488057-79488076 | None:intergenic | 40.0% | |
AATCGTGGCACCTAAGAAAA+TGG | + | chr4_4:79488147-79488166 | Msa0706500:intron | 40.0% | |
! | CCCATGGATTCCATTTTCTT+AGG | - | chr4_4:79488160-79488179 | None:intergenic | 40.0% |
AAAATGGAATCCATGGGAAG+CGG | + | chr4_4:79488163-79488182 | Msa0706500:intron | 40.0% | |
!! | CAGTACTGGGCTTTTATACT+TGG | - | chr4_4:79488441-79488460 | None:intergenic | 40.0% |
! | GAGAGAAGATAACTTTAGGG+AGG | - | chr4_4:79488495-79488514 | None:intergenic | 40.0% |
GGCAGAGAGAAGATAACTTT+AGG | - | chr4_4:79488499-79488518 | None:intergenic | 40.0% | |
TGGAAAATGGGTAAAGAGTG+TGG | - | chr4_4:79488524-79488543 | None:intergenic | 40.0% | |
!!! | TTTTTGCGATAAGCACTGGT+AGG | + | chr4_4:79488563-79488582 | Msa0706500:intron | 40.0% |
AAGAGTTCAAAGCTGAATGG+TGG | + | chr4_4:79488601-79488620 | Msa0706500:intron | 40.0% | |
TGATGATTTCGTATCAAGGC+GGG | - | chr4_4:79488748-79488767 | None:intergenic | 40.0% | |
CACATGCTTAACAGTGGAAT+TGG | + | chr4_4:79488884-79488903 | Msa0706500:intron | 40.0% | |
TCATGTGATTCTCTATTCGG+CGG | + | chr4_4:79488932-79488951 | Msa0706500:CDS | 40.0% | |
TGAGATGCATTTGGTCCATT+TGG | - | chr4_4:79488996-79489015 | None:intergenic | 40.0% | |
! | TTCACAATTTTGTGCGGTCA+AGG | + | chr4_4:79489070-79489089 | Msa0706500:CDS | 40.0% |
! | GTATTGCAACAAAAGGCATG+TGG | + | chr4_4:79489138-79489157 | Msa0706500:intron | 40.0% |
! | TATTTCCCACTCCTCTCTTT+TGG | + | chr4_4:79489242-79489261 | Msa0706500:intron | 40.0% |
!! | GATACAGAGCATTGCATGTT+AGG | + | chr4_4:79489387-79489406 | Msa0706500:intron | 40.0% |
GCTTACGAGTCCTATATGAA+GGG | + | chr4_4:79489644-79489663 | Msa0706500:CDS | 40.0% | |
CTTACGAGTCCTATATGAAG+GGG | + | chr4_4:79489645-79489664 | Msa0706500:CDS | 40.0% | |
CAACAAACTCCCCTTCATAT+AGG | - | chr4_4:79489657-79489676 | None:intergenic | 40.0% | |
TGTTTGAGCAAGATCAGAAC+TGG | + | chr4_4:79489675-79489694 | Msa0706500:CDS | 40.0% | |
GTTTGAGCAAGATCAGAACT+GGG | + | chr4_4:79489676-79489695 | Msa0706500:CDS | 40.0% | |
AGCCCTGTTAAATAGGATCA+TGG | - | chr4_4:79489947-79489966 | None:intergenic | 40.0% | |
CGTATACAGCCCTGTTAAAT+AGG | - | chr4_4:79489954-79489973 | None:intergenic | 40.0% | |
ATTTAACAGGGCTGTATACG+AGG | + | chr4_4:79489954-79489973 | Msa0706500:intron | 40.0% | |
TACGAGGAGTTAGGGAAATA+TGG | + | chr4_4:79489970-79489989 | Msa0706500:CDS | 40.0% | |
TGAAGGCAGTATCTGATACT+AGG | - | chr4_4:79490045-79490064 | None:intergenic | 40.0% | |
!! | TTGACTGGCCAATTTTGTGA+AGG | - | chr4_4:79490062-79490081 | None:intergenic | 40.0% |
GCCTCTGAACTACTAAACAT+TGG | + | chr4_4:79490090-79490109 | Msa0706500:CDS | 40.0% | |
GCCAATGTTTAGTAGTTCAG+AGG | - | chr4_4:79490094-79490113 | None:intergenic | 40.0% | |
CTAAACATTGGCGATATGGA+AGG | + | chr4_4:79490102-79490121 | Msa0706500:CDS | 40.0% | |
!! | CAAAATGGCAACCCTTGTTT+TGG | - | chr4_4:79490407-79490426 | None:intergenic | 40.0% |
!!! | ACAAGGGTTGCCATTTTGAA+AGG | + | chr4_4:79490409-79490428 | Msa0706500:CDS | 40.0% |
ACGTGTATGTAACCACCTAA+TGG | + | chr4_4:79490536-79490555 | Msa0706500:intron | 40.0% | |
! | CTTTTGCCCATGCTGTAAAA+TGG | + | chr4_4:79490562-79490581 | Msa0706500:intron | 40.0% |
TGTTCTTCACACCAATAGAG+GGG | - | chr4_4:79490724-79490743 | None:intergenic | 40.0% | |
CATGTTCTTCACACCAATAG+AGG | - | chr4_4:79490726-79490745 | None:intergenic | 40.0% | |
ATCTGCTGAACATAACTCGT+TGG | + | chr4_4:79490774-79490793 | Msa0706500:intron | 40.0% | |
TCTGCTGAACATAACTCGTT+GGG | + | chr4_4:79490775-79490794 | Msa0706500:intron | 40.0% | |
CTCGTTGGGGTAATATAGTT+TGG | + | chr4_4:79490789-79490808 | Msa0706500:intron | 40.0% | |
GAAGTAAAATCCACTAGTCC+AGG | - | chr4_4:79490840-79490859 | None:intergenic | 40.0% | |
GCATTATGGATGTCAACCTA+GGG | - | chr4_4:79490874-79490893 | None:intergenic | 40.0% | |
AGCATTATGGATGTCAACCT+AGG | - | chr4_4:79490875-79490894 | None:intergenic | 40.0% | |
! | GACATCCATAATGCTCCTTT+TGG | + | chr4_4:79490880-79490899 | Msa0706500:intron | 40.0% |
ATCAAAAGGGGAATTGTTGC+TGG | + | chr4_4:79491344-79491363 | Msa0706500:intron | 40.0% | |
! | CGCTGAAATATTTTCTGCCA+AGG | - | chr4_4:79491614-79491633 | None:intergenic | 40.0% |
TATTTCAGCGGACAAAAGAC+TGG | + | chr4_4:79491624-79491643 | Msa0706500:CDS | 40.0% | |
ATGATGCTAGAGGCTGTATT+CGG | + | chr4_4:79491677-79491696 | Msa0706500:CDS | 40.0% | |
!! | TATTCGGGCTGATTTGGTAT+TGG | + | chr4_4:79491693-79491712 | Msa0706500:intron | 40.0% |
TATAAGCGAACAAGCTCTTC+AGG | - | chr4_4:79491978-79491997 | None:intergenic | 40.0% | |
!! | CTGATTTAGTCAGTTCTGGA+AGG | + | chr4_4:79492171-79492190 | Msa0706500:CDS | 40.0% |
!!! | AGCTAACTTCTTCTGGCTTT+TGG | - | chr4_4:79492199-79492218 | None:intergenic | 40.0% |
TCAGCAAAGCTAACTTCTTC+TGG | - | chr4_4:79492206-79492225 | None:intergenic | 40.0% | |
!! | GAAGGGATATCTCTAAGATC+AGG | - | chr4_4:79492293-79492312 | None:intergenic | 40.0% |
TGATGGGAGCTTTACATACT+AGG | - | chr4_4:79492542-79492561 | None:intergenic | 40.0% | |
AGTATGTAAAGCTCCCATCA+CGG | + | chr4_4:79492542-79492561 | Msa0706500:intron | 40.0% | |
TCCCATCACGGTAGAATTTA+TGG | + | chr4_4:79492554-79492573 | Msa0706500:intron | 40.0% | |
CCAATAAGAGATGACACACT+GGG | - | chr4_4:79492590-79492609 | None:intergenic | 40.0% | |
TCCAATAAGAGATGACACAC+TGG | - | chr4_4:79492591-79492610 | None:intergenic | 40.0% | |
TCTTGCTTTCGCAAACATCA+AGG | - | chr4_4:79492702-79492721 | None:intergenic | 40.0% | |
CATGCTTATGACTTATGTGC+AGG | + | chr4_4:79492863-79492882 | Msa0706500:intron | 40.0% | |
TGTTGCAAAGTCATACAGTG+TGG | + | chr4_4:79492894-79492913 | Msa0706500:CDS | 40.0% | |
AGTTTAGCTGAAGATGCCTT+AGG | + | chr4_4:79492961-79492980 | Msa0706500:CDS | 40.0% | |
! | ATCAATTGTTGTTGACTGGG+AGG | + | chr4_4:79493183-79493202 | Msa0706500:intron | 40.0% |
GACTGGGAGGAACTAAATAA+AGG | + | chr4_4:79493196-79493215 | Msa0706500:intron | 40.0% | |
CCCGATAGATTACCATCTTT+AGG | - | chr4_4:79493260-79493279 | None:intergenic | 40.0% | |
!! | TGTGCAGACTCTAAAGTTGT+TGG | - | chr4_4:79493325-79493344 | None:intergenic | 40.0% |
! | TGCACAGTGTTTTCGTGATA+TGG | + | chr4_4:79493339-79493358 | Msa0706500:intron | 40.0% |
ACTCAAGAGAATATCTCCGA+AGG | + | chr4_4:79493641-79493660 | Msa0706500:CDS | 40.0% | |
CTCAAGAGAATATCTCCGAA+GGG | + | chr4_4:79493642-79493661 | Msa0706500:CDS | 40.0% | |
AGCTCCGGTCAATGATATAT+TGG | - | chr4_4:79493672-79493691 | None:intergenic | 40.0% | |
CCCGCTCAAAAAAATAGCAT+AGG | - | chr4_4:79493721-79493740 | None:intergenic | 40.0% | |
TGATGTTTATGAGTCTGCTG+TGG | + | chr4_4:79493874-79493893 | Msa0706500:CDS | 40.0% | |
GATGTTTATGAGTCTGCTGT+GGG | + | chr4_4:79493875-79493894 | Msa0706500:CDS | 40.0% | |
GAAGAAGGACAAAAGAGCAA+AGG | + | chr4_4:79494027-79494046 | Msa0706500:CDS | 40.0% | |
ATTTCTTGAAACCGATGACG+CGG | + | chr4_4:79494116-79494135 | Msa0706500:three_prime_UTR | 40.0% | |
ATCGGAATCAGGACACAACT+CGG | + | chr4_4:79486981-79487000 | Msa0706500:five_prime_UTR | 45.0% | |
!! | TTTCGGATCATCGACTTCCA+TGG | - | chr4_4:79487324-79487343 | None:intergenic | 45.0% |
ACGGAGATTACACTCGCTAT+CGG | + | chr4_4:79487561-79487580 | Msa0706500:CDS | 45.0% | |
GATTGCAAAGCACACGTTTG+TGG | - | chr4_4:79488058-79488077 | None:intergenic | 45.0% | |
GCGACAGTTATAAGCATGAG+TGG | + | chr4_4:79488103-79488122 | Msa0706500:intron | 45.0% | |
GTTCACAGTCCATGTAATCG+TGG | + | chr4_4:79488132-79488151 | Msa0706500:intron | 45.0% | |
! | TCTTAGGTGCCACGATTACA+TGG | - | chr4_4:79488144-79488163 | None:intergenic | 45.0% |
!! | ATAGGCGCTGATATCATAGC+AGG | - | chr4_4:79488242-79488261 | None:intergenic | 45.0% |
TGGTCCAATGGATCTTGGAT+AGG | - | chr4_4:79488260-79488279 | None:intergenic | 45.0% | |
TGCTATCAGCTCACCACTAT+CGG | + | chr4_4:79488282-79488301 | Msa0706500:intron | 45.0% | |
! | GGTCTTGTCTCATCCAATGT+GGG | - | chr4_4:79488370-79488389 | None:intergenic | 45.0% |
! | AGGTCTTGTCTCATCCAATG+TGG | - | chr4_4:79488371-79488390 | None:intergenic | 45.0% |
CAGCATACAAACACATCGTC+AGG | - | chr4_4:79488391-79488410 | None:intergenic | 45.0% | |
GACGATGTGTTTGTATGCTG+TGG | + | chr4_4:79488391-79488410 | Msa0706500:intron | 45.0% | |
CAGTCCTCACCCTATAGATT+AGG | + | chr4_4:79488415-79488434 | Msa0706500:intron | 45.0% | |
TTGGCCTAATCTATAGGGTG+AGG | - | chr4_4:79488422-79488441 | None:intergenic | 45.0% | |
! | AAATGGGTAAAGAGTGTGGC+AGG | - | chr4_4:79488520-79488539 | None:intergenic | 45.0% |
!!! | CTGCTTTTTGCGATAAGCAC+TGG | + | chr4_4:79488559-79488578 | Msa0706500:intron | 45.0% |
GAGAAAAGGCAGCTTCCAAA+TGG | + | chr4_4:79488978-79488997 | Msa0706500:CDS | 45.0% | |
!! | GGCAGATTCTAGGACATCTT+TGG | + | chr4_4:79489091-79489110 | Msa0706500:CDS | 45.0% |
! | TAGGACATCTTTGGAAGCTG+AGG | + | chr4_4:79489100-79489119 | Msa0706500:CDS | 45.0% |
! | AACAAAAGGCATGTGGCAAC+TGG | + | chr4_4:79489145-79489164 | Msa0706500:intron | 45.0% |
GGCTTACGAGTCCTATATGA+AGG | + | chr4_4:79489643-79489662 | Msa0706500:intron | 45.0% | |
TGCAGGAACAAGCTTATGCT+TGG | + | chr4_4:79489789-79489808 | Msa0706500:intron | 45.0% | |
!! | ACCAAGTTTTGTGTCGTGAG+CGG | + | chr4_4:79490004-79490023 | Msa0706500:CDS | 45.0% |
CAGAGGCTTGTAGATTTGAC+TGG | - | chr4_4:79490077-79490096 | None:intergenic | 45.0% | |
!!! | GGGTTGCCATTTTGAAAGGT+TGG | + | chr4_4:79490413-79490432 | Msa0706500:intron | 45.0% |
GTTACATACACGTGAGGCAA+AGG | - | chr4_4:79490529-79490548 | None:intergenic | 45.0% | |
TAGGTGGTTACATACACGTG+AGG | - | chr4_4:79490535-79490554 | None:intergenic | 45.0% | |
CATGGGCAAAAGAGACCATT+AGG | - | chr4_4:79490554-79490573 | None:intergenic | 45.0% | |
CTGCTGAACATAACTCGTTG+GGG | + | chr4_4:79490776-79490795 | Msa0706500:intron | 45.0% | |
!! | ACTTCTGACTTGGATACCCT+AGG | + | chr4_4:79490855-79490874 | Msa0706500:intron | 45.0% |
! | AATTTTATCAGCCCAGGAGC+TGG | + | chr4_4:79491570-79491589 | Msa0706500:intron | 45.0% |
GATATCTTTCTCCAGCTCCT+GGG | - | chr4_4:79491584-79491603 | None:intergenic | 45.0% | |
GAGCTGGAGAAAGATATCCA+TGG | + | chr4_4:79491586-79491605 | Msa0706500:CDS | 45.0% | |
GAAAGATATCCATGGTCCCT+TGG | + | chr4_4:79491594-79491613 | Msa0706500:CDS | 45.0% | |
! | TATTTTCTGCCAAGGGACCA+TGG | - | chr4_4:79491606-79491625 | None:intergenic | 45.0% |
TCTGCATACCATGATGCTAG+AGG | + | chr4_4:79491667-79491686 | Msa0706500:CDS | 45.0% | |
GAATACAGCCTCTAGCATCA+TGG | - | chr4_4:79491678-79491697 | None:intergenic | 45.0% | |
TGATGCTAGAGGCTGTATTC+GGG | + | chr4_4:79491678-79491697 | Msa0706500:CDS | 45.0% | |
ACTTTCTGCATTTCCTGCAG+TGG | - | chr4_4:79491811-79491830 | None:intergenic | 45.0% | |
CAACAAAAGGTTGCGCTCAA+TGG | - | chr4_4:79491892-79491911 | None:intergenic | 45.0% | |
! | CATTGAGCGCAACCTTTTGT+TGG | + | chr4_4:79491890-79491909 | Msa0706500:CDS | 45.0% |
TTGCAACCCTGACCAACAAA+AGG | - | chr4_4:79491905-79491924 | None:intergenic | 45.0% | |
!!! | GTTTGGCTTTTCGAGCAGAA+AGG | + | chr4_4:79492243-79492262 | Msa0706500:CDS | 45.0% |
CATGCATGTGCAGTGCAATT+AGG | - | chr4_4:79492331-79492350 | None:intergenic | 45.0% | |
CCCAGTGTGTCATCTCTTAT+TGG | + | chr4_4:79492587-79492606 | Msa0706500:intron | 45.0% | |
TGCTCAATTGCCCTTTCCTA+GGG | - | chr4_4:79492752-79492771 | None:intergenic | 45.0% | |
ATACAGTGTGGCTGGAAAGA+GGG | + | chr4_4:79492906-79492925 | Msa0706500:CDS | 45.0% | |
AAGATCTCCTCTGATCTGTC+AGG | - | chr4_4:79493283-79493302 | None:intergenic | 45.0% | |
AGAACATGCATTGGGGATCA+TGG | + | chr4_4:79493607-79493626 | Msa0706500:CDS | 45.0% | |
AAGGACAAAAGAGCAAAGGG+TGG | + | chr4_4:79494031-79494050 | Msa0706500:CDS | 45.0% | |
TTTCTTGAAACCGATGACGC+GGG | + | chr4_4:79494117-79494136 | Msa0706500:three_prime_UTR | 45.0% | |
TTAATTGACGGGGGATAGCA+TGG | + | chr4_4:79494367-79494386 | Msa0706500:three_prime_UTR | 45.0% | |
TAATTGACGGGGGATAGCAT+GGG | + | chr4_4:79494368-79494387 | Msa0706500:three_prime_UTR | 45.0% | |
!! | TAATAATATATTTCTTAATA+TGG | + | chr4_4:79491093-79491112 | Msa0706500:intron | 5.0% |
!!! | ATATTTTCATAAATTATATT+TGG | + | chr4_4:79494267-79494286 | Msa0706500:three_prime_UTR | 5.0% |
!! | CAAAAAATATATATATATAA+AGG | - | chr4_4:79494323-79494342 | None:intergenic | 5.0% |
!!! | CTTTATATATATATATTTTT+TGG | + | chr4_4:79494321-79494340 | Msa0706500:three_prime_UTR | 5.0% |
ATCAGGACACAACTCGGAGT+CGG | + | chr4_4:79486987-79487006 | Msa0706500:five_prime_UTR | 50.0% | |
GTCAAATTCCGCTGCGATTC+CGG | - | chr4_4:79487029-79487048 | None:intergenic | 50.0% | |
GCAATTGCGAAATCGCGTAG+GGG | - | chr4_4:79487102-79487121 | None:intergenic | 50.0% | |
CGCAATTGCGAAATCGCGTA+GGG | - | chr4_4:79487103-79487122 | None:intergenic | 50.0% | |
! | ATGCAGCATGGTTTGCGTCA+CGG | + | chr4_4:79487542-79487561 | Msa0706500:CDS | 50.0% |
TCGCTGTTGCTAACTGGATG+CGG | + | chr4_4:79487593-79487612 | Msa0706500:intron | 50.0% | |
GGTATTGTACAGCCCGATTG+AGG | + | chr4_4:79487720-79487739 | Msa0706500:CDS | 50.0% | |
ATTGTACAGCCCGATTGAGG+AGG | + | chr4_4:79487723-79487742 | Msa0706500:CDS | 50.0% | |
TTGAAGTTTACCCACGGTCG+TGG | + | chr4_4:79487758-79487777 | Msa0706500:CDS | 50.0% | |
AGCGCCTATCCAAGATCCAT+TGG | + | chr4_4:79488253-79488272 | Msa0706500:intron | 50.0% | |
! | GATAGTGGTGAGCTGATAGC+AGG | - | chr4_4:79488283-79488302 | None:intergenic | 50.0% |
GCTATCAGCTCACCACTATC+GGG | + | chr4_4:79488283-79488302 | Msa0706500:intron | 50.0% | |
ACACGCCTGATGTGAAGTCT+TGG | + | chr4_4:79488317-79488336 | Msa0706500:intron | 50.0% | |
CACGCCTGATGTGAAGTCTT+GGG | + | chr4_4:79488318-79488337 | Msa0706500:intron | 50.0% | |
CATGCCCAAGACTTCACATC+AGG | - | chr4_4:79488325-79488344 | None:intergenic | 50.0% | |
GATGTGAAGTCTTGGGCATG+AGG | + | chr4_4:79488325-79488344 | Msa0706500:intron | 50.0% | |
! | CTTTAGGGAGGGTGATAGAC+AGG | - | chr4_4:79488483-79488502 | None:intergenic | 50.0% |
GGAGTCATGCCATGGAGAAA+AGG | + | chr4_4:79488964-79488983 | Msa0706500:CDS | 50.0% | |
! | TGGAAGCTGCCTTTTCTCCA+TGG | - | chr4_4:79488976-79488995 | None:intergenic | 50.0% |
TCTGATTGGTAGGTTGCGCA+AGG | + | chr4_4:79489025-79489044 | Msa0706500:CDS | 50.0% | |
GTTGCGCAAGGCAGTAAAGT+GGG | + | chr4_4:79489037-79489056 | Msa0706500:CDS | 50.0% | |
GCAAGATCAGAACTGGGATG+TGG | + | chr4_4:79489682-79489701 | Msa0706500:CDS | 50.0% | |
AGGGCTGTATACGAGGAGTT+AGG | + | chr4_4:79489961-79489980 | Msa0706500:intron | 50.0% | |
GGGCTGTATACGAGGAGTTA+GGG | + | chr4_4:79489962-79489981 | Msa0706500:intron | 50.0% | |
!! | CCAAGTTTTGTGTCGTGAGC+GGG | + | chr4_4:79490005-79490024 | Msa0706500:CDS | 50.0% |
TTGAGATCTTGCCTCAGCCA+TGG | - | chr4_4:79490326-79490345 | None:intergenic | 50.0% | |
GGGCAAAAGAGACCATTAGG+TGG | - | chr4_4:79490551-79490570 | None:intergenic | 50.0% | |
AACATGGTGTGCCCCTCTAT+TGG | + | chr4_4:79490710-79490729 | Msa0706500:intron | 50.0% | |
! | TTCTCTGATCCCTGGACTAG+TGG | + | chr4_4:79490827-79490846 | Msa0706500:intron | 50.0% |
CATGTGGATGTCAGAGCCAA+AGG | + | chr4_4:79490994-79491013 | Msa0706500:intron | 50.0% | |
CATGTCGATGTCAGAGCCAA+AGG | + | chr4_4:79491132-79491151 | Msa0706500:intron | 50.0% | |
GGATATCTTTCTCCAGCTCC+TGG | - | chr4_4:79491585-79491604 | None:intergenic | 50.0% | |
AGGCTGTATTCGGGCTGATT+TGG | + | chr4_4:79491687-79491706 | Msa0706500:CDS | 50.0% | |
! | TGTGCATTTTAGGCCACTGC+AGG | + | chr4_4:79491795-79491814 | Msa0706500:intron | 50.0% |
AAGGCTGTCAGTGCTGTCTT+AGG | + | chr4_4:79491858-79491877 | Msa0706500:CDS | 50.0% | |
! | AGCGCAACCTTTTGTTGGTC+AGG | + | chr4_4:79491895-79491914 | Msa0706500:CDS | 50.0% |
! | GCGCAACCTTTTGTTGGTCA+GGG | + | chr4_4:79491896-79491915 | Msa0706500:CDS | 50.0% |
! | GCGAACAAGCTCTTCAGGTT+TGG | - | chr4_4:79491973-79491992 | None:intergenic | 50.0% |
GAGCAGAAAGGTTGTCTTGC+TGG | + | chr4_4:79492255-79492274 | Msa0706500:intron | 50.0% | |
GCTCAATTGCCCTTTCCTAG+GGG | - | chr4_4:79492751-79492770 | None:intergenic | 50.0% | |
CTGCTCAATTGCCCTTTCCT+AGG | - | chr4_4:79492753-79492772 | None:intergenic | 50.0% | |
GGAAAGGGCAATTGAGCAGT+AGG | + | chr4_4:79492754-79492773 | Msa0706500:intron | 50.0% | |
AAGGGCAATTGAGCAGTAGG+TGG | + | chr4_4:79492757-79492776 | Msa0706500:intron | 50.0% | |
GCAGTAGGTGGTGATTACTG+TGG | + | chr4_4:79492769-79492788 | Msa0706500:intron | 50.0% | |
GATGTGGTTATACTGCCAGC+AGG | - | chr4_4:79492797-79492816 | None:intergenic | 50.0% | |
GCAAAGTCATACAGTGTGGC+TGG | + | chr4_4:79492898-79492917 | Msa0706500:CDS | 50.0% | |
CATACAGTGTGGCTGGAAAG+AGG | + | chr4_4:79492905-79492924 | Msa0706500:CDS | 50.0% | |
AGGTCTACAGGCCTGATTGA+AGG | - | chr4_4:79493240-79493259 | None:intergenic | 50.0% | |
CAGGCCTGTAGACCTAAAGA+TGG | + | chr4_4:79493245-79493264 | Msa0706500:intron | 50.0% | |
ACATGCATTGGGGATCATGG+AGG | + | chr4_4:79493610-79493629 | Msa0706500:CDS | 50.0% | |
TATCATTGACCGGAGCTGAG+CGG | + | chr4_4:79493675-79493694 | Msa0706500:CDS | 50.0% | |
ATTATGTACCCGCTCAGCTC+CGG | - | chr4_4:79493687-79493706 | None:intergenic | 50.0% | |
TACGCAAGGTCCAGCACAAT+CGG | - | chr4_4:79493971-79493990 | None:intergenic | 50.0% | |
AACAAAGGAACCCGCGTCAT+CGG | - | chr4_4:79494130-79494149 | None:intergenic | 50.0% | |
AATTGACGGGGGATAGCATG+GGG | + | chr4_4:79494369-79494388 | Msa0706500:three_prime_UTR | 50.0% | |
CGGAAGTGAACTGAACTCGC+CGG | + | chr4_4:79487007-79487026 | Msa0706500:five_prime_UTR | 55.0% | |
ATCGCAGCGGAATTTGACGC+CGG | + | chr4_4:79487031-79487050 | Msa0706500:five_prime_UTR | 55.0% | |
TGCGAAATCGCGTAGGGGAA+GGG | - | chr4_4:79487097-79487116 | None:intergenic | 55.0% | |
TTGCGAAATCGCGTAGGGGA+AGG | - | chr4_4:79487098-79487117 | None:intergenic | 55.0% | |
GCGCAATTGCGAAATCGCGT+AGG | - | chr4_4:79487104-79487123 | None:intergenic | 55.0% | |
CGTATACTTGCCACGACCGT+GGG | - | chr4_4:79487771-79487790 | None:intergenic | 55.0% | |
TCGTATACTTGCCACGACCG+TGG | - | chr4_4:79487772-79487791 | None:intergenic | 55.0% | |
GCAGGTGGTCCAATGGATCT+TGG | - | chr4_4:79488265-79488284 | None:intergenic | 55.0% | |
GCTGATAGCAGGTGGTCCAA+TGG | - | chr4_4:79488272-79488291 | None:intergenic | 55.0% | |
AGTGGTGAGCTGATAGCAGG+TGG | - | chr4_4:79488280-79488299 | None:intergenic | 55.0% | |
GTGGCTCAAGAGCGAGAACA+GGG | - | chr4_4:79488660-79488679 | None:intergenic | 55.0% | |
AGTGGCTCAAGAGCGAGAAC+AGG | - | chr4_4:79488661-79488680 | None:intergenic | 55.0% | |
TCTATTCGGCGGAGAGAGCT+TGG | + | chr4_4:79488943-79488962 | Msa0706500:CDS | 55.0% | |
GAGAGCTTGGAGTCATGCCA+TGG | + | chr4_4:79488956-79488975 | Msa0706500:CDS | 55.0% | |
GGTTGCGCAAGGCAGTAAAG+TGG | + | chr4_4:79489036-79489055 | Msa0706500:CDS | 55.0% | |
GTGCGGTCAAGGCAGATTCT+AGG | + | chr4_4:79489081-79489100 | Msa0706500:CDS | 55.0% | |
CCCGCTCACGACACAAAACT+TGG | - | chr4_4:79490008-79490027 | None:intergenic | 55.0% | |
!! | TTTGTGTCGTGAGCGGGTTG+AGG | + | chr4_4:79490011-79490030 | Msa0706500:CDS | 55.0% |
GTGTTTGTACCAGGCTGCCA+TGG | + | chr4_4:79490306-79490325 | Msa0706500:intron | 55.0% | |
ACACGTGAGGCAAAGGTGAG+AGG | - | chr4_4:79490522-79490541 | None:intergenic | 55.0% | |
TTTCCTAGGGGCCCTATGAG+AGG | - | chr4_4:79492739-79492758 | None:intergenic | 55.0% | |
TCTCATAGGGCCCCTAGGAA+AGG | + | chr4_4:79492738-79492757 | Msa0706500:intron | 55.0% | |
CTCATAGGGCCCCTAGGAAA+GGG | + | chr4_4:79492739-79492758 | Msa0706500:intron | 55.0% | |
GTGATTACTGTGGTGCCTGC+TGG | + | chr4_4:79492779-79492798 | Msa0706500:intron | 55.0% | |
TATCGGGCCTGACAGATCAG+AGG | + | chr4_4:79493273-79493292 | Msa0706500:intron | 55.0% | |
TGGGGATCATGGAGGAGAAG+AGG | + | chr4_4:79493618-79493637 | Msa0706500:CDS | 55.0% | |
ATCATTGACCGGAGCTGAGC+GGG | + | chr4_4:79493676-79493695 | Msa0706500:CDS | 55.0% | |
CAATTGCCTGGAAAGCTGGG+GGG | - | chr4_4:79493940-79493959 | None:intergenic | 55.0% | |
GCAATTGCCTGGAAAGCTGG+GGG | - | chr4_4:79493941-79493960 | None:intergenic | 55.0% | |
GGCAATTGCCTGGAAAGCTG+GGG | - | chr4_4:79493942-79493961 | None:intergenic | 55.0% | |
GGGCAATTGCCTGGAAAGCT+GGG | - | chr4_4:79493943-79493962 | None:intergenic | 55.0% | |
GTCCAGCACAATCGGGTTAC+GGG | - | chr4_4:79493963-79493982 | None:intergenic | 55.0% | |
GGTCCAGCACAATCGGGTTA+CGG | - | chr4_4:79493964-79493983 | None:intergenic | 55.0% | |
ACGCAAGGTCCAGCACAATC+GGG | - | chr4_4:79493970-79493989 | None:intergenic | 55.0% | |
TGAACTCGCCGGAATCGCAG+CGG | + | chr4_4:79487018-79487037 | Msa0706500:five_prime_UTR | 60.0% | |
AATCGCGTAGGGGAAGGGGA+GGG | - | chr4_4:79487092-79487111 | None:intergenic | 60.0% | |
AAATCGCGTAGGGGAAGGGG+AGG | - | chr4_4:79487093-79487112 | None:intergenic | 60.0% | |
GCGAAATCGCGTAGGGGAAG+GGG | - | chr4_4:79487096-79487115 | None:intergenic | 60.0% | |
AGGGATCAGACCGCTTCCCA+TGG | - | chr4_4:79488176-79488195 | None:intergenic | 60.0% | |
CTCACCACTATCGGGCGACT+CGG | + | chr4_4:79488291-79488310 | Msa0706500:intron | 60.0% | |
TCACCACTATCGGGCGACTC+GGG | + | chr4_4:79488292-79488311 | Msa0706500:intron | 60.0% | |
GGGAGGGTGATAGACAGGAG+TGG | - | chr4_4:79488478-79488497 | None:intergenic | 60.0% | |
TCTCCTCTCATAGGGCCCCT+AGG | + | chr4_4:79492733-79492752 | Msa0706500:intron | 60.0% | |
CGGGCAATTGCCTGGAAAGC+TGG | - | chr4_4:79493944-79493963 | None:intergenic | 60.0% | |
TCGGGTTACGGGCAATTGCC+TGG | - | chr4_4:79493952-79493971 | None:intergenic | 60.0% | |
TGCCCGTAACCCGATTGTGC+TGG | + | chr4_4:79493958-79493977 | Msa0706500:CDS | 60.0% | |
ATCGCGTAGGGGAAGGGGAG+GGG | - | chr4_4:79487091-79487110 | None:intergenic | 65.0% | |
TGACCCGAGTCGCCCGATAG+TGG | - | chr4_4:79488298-79488317 | None:intergenic | 65.0% | |
GTACCAGGCTGCCATGGCTG+AGG | + | chr4_4:79490312-79490331 | Msa0706500:intron | 65.0% | |
TTGCCTCAGCCATGGCAGCC+TGG | - | chr4_4:79490318-79490337 | None:intergenic | 65.0% | |
TGGGGGGAAGGGAGCAATGC+GGG | - | chr4_4:79493924-79493943 | None:intergenic | 65.0% | |
CTGGGGGGAAGGGAGCAATG+CGG | - | chr4_4:79493925-79493944 | None:intergenic | 65.0% | |
TCCCTTCCCCCCAGCTTTCC+AGG | + | chr4_4:79493931-79493950 | Msa0706500:CDS | 65.0% | |
GCCTGGAAAGCTGGGGGGAA+GGG | - | chr4_4:79493935-79493954 | None:intergenic | 65.0% | |
TGCCTGGAAAGCTGGGGGGA+AGG | - | chr4_4:79493936-79493955 | None:intergenic | 65.0% | |
GTAGGGGAAGGGGAGGGGGA+AGG | - | chr4_4:79487086-79487105 | None:intergenic | 70.0% | |
TCGCGTAGGGGAAGGGGAGG+GGG | - | chr4_4:79487090-79487109 | None:intergenic | 70.0% | |
GGGGGGAAGGGAGCAATGCG+GGG | - | chr4_4:79493923-79493942 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 79486969 | 79494421 | 79486969 | ID=Msa0706500;Name=Msa0706500 |
chr4_4 | mRNA | 79486969 | 79494421 | 79486969 | ID=Msa0706500-mRNA-1;Parent=Msa0706500;Name=Msa0706500-mRNA-1;_AED=0.12;_eAED=0.12;_QI=109|1|1|1|0.92|0.85|14|343|603 |
chr4_4 | exon | 79486969 | 79487072 | 79486969 | ID=Msa0706500-mRNA-1:exon:25622;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79487291 | 79487386 | 79487291 | ID=Msa0706500-mRNA-1:exon:25623;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79487516 | 79487582 | 79487516 | ID=Msa0706500-mRNA-1:exon:25624;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79487718 | 79487828 | 79487718 | ID=Msa0706500-mRNA-1:exon:25625;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79488926 | 79489121 | 79488926 | ID=Msa0706500-mRNA-1:exon:25626;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79489644 | 79489729 | 79489644 | ID=Msa0706500-mRNA-1:exon:25627;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79489963 | 79490158 | 79489963 | ID=Msa0706500-mRNA-1:exon:25628;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79490319 | 79490430 | 79490319 | ID=Msa0706500-mRNA-1:exon:25629;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79491581 | 79491708 | 79491581 | ID=Msa0706500-mRNA-1:exon:25630;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79491807 | 79492013 | 79491807 | ID=Msa0706500-mRNA-1:exon:25631;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79492155 | 79492264 | 79492155 | ID=Msa0706500-mRNA-1:exon:25632;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79492885 | 79493014 | 79492885 | ID=Msa0706500-mRNA-1:exon:25633;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79493551 | 79493697 | 79493551 | ID=Msa0706500-mRNA-1:exon:25634;Parent=Msa0706500-mRNA-1 |
chr4_4 | exon | 79493848 | 79494421 | 79493848 | ID=Msa0706500-mRNA-1:exon:25635;Parent=Msa0706500-mRNA-1 |
chr4_4 | five_prime_UTR | 79486969 | 79487072 | 79486969 | ID=Msa0706500-mRNA-1:five_prime_utr;Parent=Msa0706500-mRNA-1 |
chr4_4 | five_prime_UTR | 79487291 | 79487295 | 79487291 | ID=Msa0706500-mRNA-1:five_prime_utr;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79487296 | 79487386 | 79487296 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79487516 | 79487582 | 79487516 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79487718 | 79487828 | 79487718 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79488926 | 79489121 | 79488926 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79489644 | 79489729 | 79489644 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79489963 | 79490158 | 79489963 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79490319 | 79490430 | 79490319 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79491581 | 79491708 | 79491581 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79491807 | 79492013 | 79491807 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79492155 | 79492264 | 79492155 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79492885 | 79493014 | 79492885 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79493551 | 79493697 | 79493551 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | CDS | 79493848 | 79494078 | 79493848 | ID=Msa0706500-mRNA-1:cds;Parent=Msa0706500-mRNA-1 |
chr4_4 | three_prime_UTR | 79494079 | 79494421 | 79494079 | ID=Msa0706500-mRNA-1:three_prime_utr;Parent=Msa0706500-mRNA-1 |
Gene Sequence |
Protein sequence |