AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1035540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1035540 MtrunA17_Chr7g0258991 97.353 680 16 1 3 680 330 1009 0.0 1336
Msa1035540 MtrunA17_Chr3g0145071 41.245 691 280 16 3 660 354 951 1.81e-122 390
Msa1035540 MtrunA17_Chr4g0035661 40.793 706 296 17 3 677 344 958 1.75e-114 369
Msa1035540 MtrunA17_Chr5g0405181 49.462 93 45 1 3 93 282 374 4.27e-20 95.5
Msa1035540 MtrunA17_Chr8g0372171 47.368 95 48 1 3 95 281 375 1.88e-19 93.6
Msa1035540 MtrunA17_Chr1g0152231 40.426 141 75 4 2 138 268 403 2.44e-18 89.7
Msa1035540 MtrunA17_Chr4g0036001 40.336 119 60 2 3 119 284 393 1.32e-17 87.4
Msa1035540 MtrunA17_Chr3g0142261 44.554 101 54 1 3 101 280 380 1.75e-17 87.4
Msa1035540 MtrunA17_Chr6g0483701 50.000 94 44 2 3 93 289 382 2.62e-17 86.7
Msa1035540 MtrunA17_Chr3g0132921 33.987 153 83 5 2 144 281 425 2.07e-14 76.6
Msa1035540 MtrunA17_Chr1g0193221 28.634 227 121 9 3 212 261 463 2.85e-14 77.0
Msa1035540 MtrunA17_Chr4g0045381 46.078 102 48 3 2 98 464 563 3.98e-14 76.6
Msa1035540 MtrunA17_Chr3g0134191 42.857 98 49 3 2 93 296 392 7.26e-14 75.5
Msa1035540 MtrunA17_Chr5g0427481 43.434 99 45 3 2 94 290 383 1.39e-13 74.7
Msa1035540 MtrunA17_Chr4g0070001 41.284 109 51 2 3 98 399 507 1.57e-13 74.3
Msa1035540 MtrunA17_Chr1g0178411 45.872 109 52 4 3 107 299 404 2.37e-13 73.9
Msa1035540 MtrunA17_Chr3g0102921 45.283 106 46 4 3 99 717 819 3.43e-13 73.2
Msa1035540 MtrunA17_Chr3g0122121 37.000 100 58 3 1 97 371 468 4.63e-13 72.8
Msa1035540 MtrunA17_Chr5g0421591 32.667 150 90 5 3 142 635 783 5.36e-13 72.4
Msa1035540 MtrunA17_Chr4g0053211 36.000 125 64 5 2 120 304 418 6.33e-13 72.4
Msa1035540 MtrunA17_Chr7g0266631 46.237 93 47 2 3 93 295 386 1.14e-12 71.6
Msa1035540 MtrunA17_Chr1g0182151 43.011 93 50 2 3 93 336 427 1.35e-12 71.2
Msa1035540 MtrunA17_Chr2g0327581 43.000 100 51 3 12 107 338 435 1.59e-12 71.2
Msa1035540 MtrunA17_Chr1g0153061 41.837 98 50 3 2 93 296 392 3.03e-12 70.1
Msa1035540 MtrunA17_Chr2g0322291 41.414 99 53 3 1 97 362 457 4.66e-12 69.7
Msa1035540 MtrunA17_Chr4g0069141 41.121 107 53 3 7 105 432 536 1.75e-11 68.2
Msa1035540 MtrunA17_Chr5g0447041 42.453 106 49 4 3 99 742 844 2.38e-11 67.4
Msa1035540 MtrunA17_Chr5g0421521 32.000 150 91 5 3 142 635 783 2.59e-11 67.0
Msa1035540 MtrunA17_Chr1g0192481 39.394 99 55 3 3 99 325 420 4.20e-11 66.2
Msa1035540 MtrunA17_Chr8g0377731 41.111 90 47 3 10 97 337 422 4.63e-11 66.6
Msa1035540 MtrunA17_Chr5g0411971 31.333 150 92 5 3 142 660 808 5.03e-11 66.2
Msa1035540 MtrunA17_Chr7g0257301 43.299 97 43 3 3 97 682 768 5.68e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1035540 AT3G12020.4 61.087 681 207 10 3 674 326 957 0.0 720
Msa1035540 AT3G12020.1 61.087 681 207 10 3 674 326 957 0.0 720
Msa1035540 AT5G06670.2 59.970 672 224 13 3 663 323 960 0.0 693
Msa1035540 AT5G06670.6 59.970 672 224 13 3 663 332 969 0.0 693
Msa1035540 AT5G06670.1 59.970 672 224 13 3 663 332 969 0.0 693
Msa1035540 AT5G06670.3 59.970 672 224 13 3 663 323 960 0.0 693
Msa1035540 AT3G12020.3 52.763 760 222 12 3 674 326 1036 0.0 650
Msa1035540 AT3G12020.2 52.763 760 222 12 3 674 326 1036 0.0 650
Msa1035540 AT5G06670.5 61.098 419 137 9 3 412 323 724 8.89e-147 445
Msa1035540 AT5G06670.8 60.697 402 132 9 3 395 323 707 8.27e-138 421
Msa1035540 AT5G06670.4 60.697 402 132 9 3 395 323 707 8.27e-138 421
Msa1035540 AT5G06670.7 60.697 402 132 9 3 395 323 707 8.27e-138 421
Msa1035540 AT1G21730.1 45.798 583 263 15 3 557 332 889 2.10e-127 399
Msa1035540 AT4G39050.1 41.860 688 273 18 3 668 353 935 3.47e-117 376
Msa1035540 AT2G21380.2 64.407 177 57 2 3 177 359 531 2.33e-58 213
Msa1035540 AT2G21380.2 38.636 396 204 9 278 658 547 918 5.96e-50 188
Msa1035540 AT2G21380.1 64.407 177 57 2 3 177 359 531 2.33e-58 213
Msa1035540 AT2G21380.1 38.636 396 204 9 278 658 547 918 5.96e-50 188
Msa1035540 AT4G24170.1 47.917 96 48 1 3 96 264 359 4.55e-19 92.8
Msa1035540 AT4G24170.2 47.917 96 48 1 3 96 264 359 4.55e-19 92.8
Msa1035540 AT3G51150.5 40.336 119 62 2 3 119 126 237 3.53e-18 89.7
Msa1035540 AT3G51150.1 40.336 119 62 2 3 119 279 390 3.97e-18 89.7
Msa1035540 AT3G51150.2 40.336 119 62 2 3 119 279 390 4.15e-18 89.7
Msa1035540 AT3G51150.4 40.336 119 62 2 3 119 279 390 4.15e-18 89.7
Msa1035540 AT3G51150.3 40.336 119 62 2 3 119 279 390 4.15e-18 89.7
Msa1035540 AT5G66310.2 40.299 134 75 3 3 133 280 411 1.70e-17 87.8
Msa1035540 AT5G66310.3 40.299 134 75 3 3 133 280 411 1.70e-17 87.8
Msa1035540 AT5G66310.1 40.299 134 75 3 3 133 280 411 1.70e-17 87.8
Msa1035540 AT1G18370.1 39.535 129 66 3 3 128 290 409 4.76e-17 86.3
Msa1035540 AT2G21300.2 45.161 93 49 1 3 93 284 376 1.04e-16 85.1
Msa1035540 AT2G21300.4 45.161 93 49 1 3 93 284 376 1.04e-16 85.1
Msa1035540 AT2G21300.3 45.161 93 49 1 3 93 284 376 1.04e-16 85.1
Msa1035540 AT2G21300.1 45.161 93 49 1 3 93 284 376 1.04e-16 85.1
Msa1035540 AT2G21300.5 45.161 93 49 1 3 93 284 376 1.04e-16 85.1
Msa1035540 AT3G43210.3 47.872 94 46 2 3 93 285 378 1.95e-16 84.3
Msa1035540 AT3G43210.5 47.872 94 46 2 3 93 285 378 1.95e-16 84.3
Msa1035540 AT3G43210.2 47.872 94 46 2 3 93 285 378 1.95e-16 84.3
Msa1035540 AT3G43210.4 47.872 94 46 2 3 93 285 378 1.95e-16 84.3
Msa1035540 AT3G43210.1 47.872 94 46 2 3 93 285 378 1.95e-16 84.3
Msa1035540 AT4G38950.3 45.161 93 49 1 3 93 273 365 1.00e-15 81.6
Msa1035540 AT4G38950.5 45.161 93 49 1 3 93 273 365 1.00e-15 81.6
Msa1035540 AT4G38950.4 45.161 93 49 1 3 93 273 365 1.00e-15 81.6
Msa1035540 AT4G38950.1 45.161 93 49 1 3 93 273 365 1.00e-15 81.6
Msa1035540 AT4G38950.2 45.161 93 49 1 3 93 273 365 1.00e-15 81.6
Msa1035540 AT1G59540.2 43.299 97 51 2 2 94 168 264 9.21e-15 78.6
Msa1035540 AT3G10180.2 32.086 187 100 6 3 172 262 438 1.14e-14 78.6
Msa1035540 AT1G59540.1 43.299 97 51 2 2 94 260 356 1.16e-14 78.2
Msa1035540 AT3G10180.1 32.086 187 100 6 3 172 262 438 1.30e-14 78.6
Msa1035540 AT5G60930.3 35.200 125 67 3 2 120 293 409 1.10e-13 75.5
Msa1035540 AT5G60930.2 35.200 125 67 3 2 120 293 409 1.30e-13 75.1
Msa1035540 AT5G60930.1 35.200 125 67 3 2 120 293 409 1.53e-13 75.1
Msa1035540 AT3G50240.3 39.200 125 59 5 2 116 211 328 1.69e-13 74.7
Msa1035540 AT3G23670.2 38.614 101 55 4 1 97 366 463 1.88e-13 74.7
Msa1035540 AT3G50240.2 44.118 102 42 4 2 93 313 409 1.97e-13 74.3
Msa1035540 AT3G44050.1 36.250 160 83 7 1 147 367 520 2.07e-13 74.7
Msa1035540 AT3G63480.2 51.471 68 28 2 2 64 268 335 2.21e-13 73.6
Msa1035540 AT3G63480.1 51.471 68 28 2 2 64 272 339 2.38e-13 73.2
Msa1035540 AT3G50240.1 44.118 102 42 4 2 93 313 409 2.49e-13 74.3
Msa1035540 AT3G50240.4 44.118 102 42 4 2 93 313 409 2.62e-13 74.3
Msa1035540 AT3G23670.1 38.000 100 57 3 1 97 366 463 2.69e-13 74.3
Msa1035540 AT4G14150.1 38.614 101 55 4 1 97 361 458 3.09e-13 73.9
Msa1035540 AT2G28620.1 45.161 93 48 2 3 93 331 422 3.44e-13 73.9
Msa1035540 AT2G28620.3 45.161 93 48 2 3 93 331 422 3.50e-13 73.6
Msa1035540 AT2G28620.2 45.161 93 48 2 3 93 331 422 3.50e-13 73.6
Msa1035540 AT2G37420.1 43.011 93 50 2 3 93 329 420 8.60e-13 72.4
Msa1035540 AT2G37420.2 43.011 93 50 2 3 93 329 420 8.60e-13 72.4
Msa1035540 AT2G36200.1 29.258 229 147 6 3 219 298 523 9.11e-13 72.4
Msa1035540 AT3G45850.2 37.333 150 65 5 3 148 336 460 1.27e-12 72.0
Msa1035540 AT3G45850.1 37.333 150 65 5 3 148 336 460 1.27e-12 72.0
Msa1035540 AT2G36200.2 46.237 93 47 2 3 93 298 389 1.43e-12 71.6
Msa1035540 AT5G47820.2 41.837 98 50 3 2 93 303 399 2.66e-12 70.9
Msa1035540 AT5G47820.1 41.837 98 50 3 2 93 303 399 2.66e-12 70.9
Msa1035540 AT3G19050.1 50.000 74 32 2 2 70 464 537 3.23e-11 67.8
Msa1035540 AT3G44730.2 40.741 108 52 4 3 101 689 793 6.80e-11 66.2
Msa1035540 AT3G44730.3 40.741 108 52 4 3 101 689 793 6.80e-11 66.2
Msa1035540 AT3G44730.1 40.741 108 52 4 3 101 644 748 7.45e-11 66.2
Msa1035540 AT3G44730.4 40.741 108 52 4 3 101 644 748 7.45e-11 66.2

Find 157 sgRNAs with CRISPR-Local

Find 585 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTAACTATGCTCATAAA+AGG 0.208042 7_1:+71347171 None:intergenic
TTTGTCTTCTTCTCCTCTTT+TGG 0.209511 7_1:+71351628 None:intergenic
CTACGGGGACCAGGCTTATT+AGG 0.213335 7_1:+71351902 None:intergenic
CTCATTATGGTTCATGAGTT+TGG 0.217833 7_1:+71347818 None:intergenic
TATTCACGAGGATAGTTTAT+TGG 0.241992 7_1:-71350716 Msa1035540:CDS
TCATCTTCCCCAATGTCTTT+TGG 0.247850 7_1:+71352840 None:intergenic
TCCGTTTCCGTCTGCTTTAA+CGG 0.263190 7_1:-71347081 None:intergenic
CTGAAGCACTCTAGTCAATT+TGG 0.264544 7_1:+71354937 None:intergenic
AAAGAGAATTTGCAATTTGA+TGG 0.278903 7_1:-71347450 Msa1035540:CDS
ACTAGTGGAACAGCTCAAAA+TGG 0.286198 7_1:-71347744 Msa1035540:CDS
GGAGCAGAAAACGATGTTTC+AGG 0.290075 7_1:-71347480 Msa1035540:CDS
AGAAACATGGGCTACTAAAT+TGG 0.290212 7_1:-71351606 Msa1035540:CDS
CCTCCGAATGGTGTGCTAAT+TGG 0.292170 7_1:-71347196 Msa1035540:three_prime_UTR
TAAGCTGTTCTTGAATTATA+CGG 0.292955 7_1:+71349188 None:intergenic
ACAAGAGATTCAATGCTTAA+AGG 0.313182 7_1:-71352904 Msa1035540:CDS
AAGAAGCAACTGTTTCTTGC+AGG 0.317195 7_1:+71349062 None:intergenic
GTCAATTTGGAGTCCCTATA+TGG 0.324044 7_1:+71354950 None:intergenic
TCAATGCTTAAAGGAAGAAT+TGG 0.327522 7_1:-71352895 Msa1035540:CDS
AGCTGCTGCTGTTGAGCTTA+AGG 0.332244 7_1:-71347859 Msa1035540:CDS
ATTCACGAGGATAGTTTATT+GGG 0.336406 7_1:-71350715 Msa1035540:CDS
GTCTTCTTCTTGTTCCAATC+TGG 0.345309 7_1:+71352009 None:intergenic
GAGTGAACAAATAGATTTGC+TGG 0.362756 7_1:-71349814 Msa1035540:CDS
TATTGACCTGTATGTTAATC+TGG 0.363979 7_1:-71351680 Msa1035540:CDS
TTAAGCATTGAATCTCTTGT+TGG 0.365181 7_1:+71352907 None:intergenic
TTGCTTGAGATTCCCTTCAT+TGG 0.366083 7_1:+71348910 None:intergenic
CCATGATAGTCCTTGGTTCC+AGG 0.366677 7_1:+71348968 None:intergenic
ACGGTTGACTAAGTTGATTT+TGG 0.373186 7_1:-71351957 Msa1035540:CDS
GAAGCGGAAAGTGAGTTCTT+TGG 0.376149 7_1:+71347250 None:intergenic
ACGTGGGGTAGGTGAATTCT+TGG 0.377347 7_1:+71347770 None:intergenic
GACGCTAAAGCTGCTTTGTT+AGG 0.379601 7_1:-71351989 Msa1035540:CDS
AGCTAGTCACATTCCATATA+GGG 0.381768 7_1:-71354963 Msa1035540:CDS
AAGCTAGTCACATTCCATAT+AGG 0.392673 7_1:-71354964 Msa1035540:CDS
TTCATTCAAGTTCATTAAAG+AGG 0.401874 7_1:-71350028 Msa1035540:CDS
GCCCTAGCTATGGACCAAAA+AGG 0.408245 7_1:+71347288 None:intergenic
CGGTAGATAATCTCTCATTA+TGG 0.410725 7_1:+71347805 None:intergenic
CAGCTTCATATGAAAGTTCC+AGG 0.411353 7_1:+71347634 None:intergenic
CAAAGGACCAGCTTGAAGTT+AGG 0.423857 7_1:-71347929 Msa1035540:CDS
CCCCGTAGAAGACATTCCTT+TGG 0.427564 7_1:-71351887 Msa1035540:CDS
CAGTTCAGCCAAAAGACATT+GGG 0.427908 7_1:-71352848 Msa1035540:CDS
TTCCATCCAGATTAACATAC+AGG 0.439806 7_1:+71351674 None:intergenic
TTAAAGTAGGAGTGGCTTGA+GGG 0.441855 7_1:-71347370 Msa1035540:three_prime_UTR
TAGACTTAGACGAAATGATC+AGG 0.451513 7_1:-71347703 Msa1035540:CDS
GGCAAAGCATATTGAAATAC+AGG 0.455231 7_1:-71354681 Msa1035540:CDS
CATTACAATTTGTTTAAAGT+AGG 0.456262 7_1:-71347383 Msa1035540:three_prime_UTR
AAGAATTGGAACAATTAAAG+AGG 0.456455 7_1:-71352881 Msa1035540:CDS
AGCTTTCTGCGGCTAGAGAA+TGG 0.458379 7_1:+71350782 None:intergenic
AAGGTTGAAAGATGAAATTA+AGG 0.460678 7_1:-71349841 Msa1035540:CDS
TAATAAAGGTGGAGATGAAA+AGG 0.463563 7_1:-71349860 Msa1035540:intron
GGCTAGAGAATGGGAAAGTC+TGG 0.464258 7_1:+71350792 None:intergenic
TACATTGAAGTTTGCTCACC+GGG 0.464421 7_1:-71354702 Msa1035540:CDS
TCCGTTAAAGCAGACGGAAA+CGG 0.470583 7_1:+71347080 None:intergenic
CTCCAAAGGAATGTCTTCTA+CGG 0.471082 7_1:+71351885 None:intergenic
GAAGAGAGTTCATATGCTAA+AGG 0.479908 7_1:-71347891 Msa1035540:CDS
TGATAAATCCTTTGAACTTG+AGG 0.480244 7_1:-71349631 Msa1035540:intron
ATTGGGACAAGAGACACCTT+TGG 0.485494 7_1:-71350698 Msa1035540:intron
TCTTCACTGCTACTTGATGA+AGG 0.486688 7_1:+71354734 None:intergenic
TCCAAAGGAATGTCTTCTAC+GGG 0.490970 7_1:+71351886 None:intergenic
AATTAACTATGCTCATAAAA+GGG 0.495358 7_1:+71347172 None:intergenic
TGGCATATCTTCCATACAAA+AGG 0.496300 7_1:-71351729 Msa1035540:CDS
AGCTGATGATTCTCCAAAAG+AGG 0.496614 7_1:-71351641 Msa1035540:CDS
CTAGTGGAACAGCTCAAAAT+GGG 0.496640 7_1:-71347743 Msa1035540:CDS
CATGATAGTCCTTGGTTCCA+GGG 0.497930 7_1:+71348969 None:intergenic
TTGATCAAATTGACCTTCTG+AGG 0.499735 7_1:-71350085 Msa1035540:CDS
AGTGAAGTTGCAATCCAGAT+TGG 0.500971 7_1:-71352023 Msa1035540:CDS
CTTCACTGCTACTTGATGAA+GGG 0.501104 7_1:+71354735 None:intergenic
AAGAGAGTTCATATGCTAAA+GGG 0.502835 7_1:-71347890 Msa1035540:CDS
TCAGGCTGTTGCTGAGCTGA+TGG 0.503931 7_1:-71349664 Msa1035540:intron
CATTGTGCTCCTAAAACAAA+AGG 0.508899 7_1:-71352817 Msa1035540:intron
GGACCAATTAGCACACCATT+CGG 0.512676 7_1:+71347193 None:intergenic
CAGTCTTCTCTCAGTGGTCA+TGG 0.513817 7_1:-71354917 Msa1035540:CDS
GAATGTCTTCTACGGGGACC+AGG 0.514277 7_1:+71351893 None:intergenic
TGAATGAAGTGCCACCTCTC+CGG 0.516302 7_1:+71350043 None:intergenic
AACTGTTACCTCAAGTTCAA+AGG 0.517982 7_1:+71349623 None:intergenic
AACATGGACAGTACCAATGA+AGG 0.518862 7_1:-71348923 Msa1035540:CDS
AAAACAAAGAGAAGCATACC+TGG 0.520382 7_1:-71347556 Msa1035540:CDS
AATCATTCACAACATTTCCC+TGG 0.520963 7_1:-71348986 Msa1035540:CDS
GCTTTCTGCGGCTAGAGAAT+GGG 0.523031 7_1:+71350783 None:intergenic
TGTTGTGAATGATTGACTAC+AGG 0.524318 7_1:+71348995 None:intergenic
AAACGGGAAAGTGCCTTGAC+AGG 0.524872 7_1:-71350895 Msa1035540:CDS
AAGTTCACCATGATAGTCCT+TGG 0.525605 7_1:+71348961 None:intergenic
GAGCAGAAAACGATGTTTCA+GGG 0.526579 7_1:-71347479 Msa1035540:CDS
TGTCCATGTTTCCTTTGTCA+AGG 0.527628 7_1:+71348936 None:intergenic
TCAGAGCAGACAGATCAATC+AGG 0.532013 7_1:-71349762 Msa1035540:CDS
ACAACATTTCCCTGGAACCA+AGG 0.532074 7_1:-71348978 Msa1035540:CDS
TTTAAAGTAGGAGTGGCTTG+AGG 0.536315 7_1:-71347371 Msa1035540:three_prime_UTR
ACAGTTCAGCCAAAAGACAT+TGG 0.536795 7_1:-71352849 Msa1035540:CDS
GTATTTCAATATGCTTTGCC+CGG 0.537878 7_1:+71354684 None:intergenic
TCTGATTCCTAACTTCAAGC+TGG 0.537915 7_1:+71347922 None:intergenic
TCTTGTGCTGCTCCCTCAGA+AGG 0.539271 7_1:+71350072 None:intergenic
CCTGGAACCAAGGACTATCA+TGG 0.540421 7_1:-71348968 Msa1035540:CDS
ATCTTTATCGTCTCTTGCGT+CGG 0.541137 7_1:+71350738 None:intergenic
ATACATTGAAGTTTGCTCAC+CGG 0.545315 7_1:-71354703 Msa1035540:CDS
AAAGGGTCCGTTAAAGCAGA+CGG 0.546004 7_1:+71347074 None:intergenic
ACGAGATTTCCTAATAAGCC+TGG 0.548358 7_1:-71351911 Msa1035540:CDS
CTTAGAAAGAGATCAGAAAG+AGG 0.550724 7_1:-71347607 Msa1035540:CDS
CAAATAAGAAGCCCTAGCTA+TGG 0.551746 7_1:+71347278 None:intergenic
ACATTCCTTTGGAGAAGAAG+AGG 0.552766 7_1:-71351876 Msa1035540:intron
GAAGGCTGGGGAAAAGGAAG+CGG 0.553696 7_1:+71347234 None:intergenic
AAACACCTCTTCTTCTCCAA+AGG 0.554306 7_1:+71351871 None:intergenic
AAAACGAACTTGCCAACATG+TGG 0.554884 7_1:-71347533 Msa1035540:CDS
CCACTAGTTCTACGTGGGGT+AGG 0.555982 7_1:+71347759 None:intergenic
CAATTTGTTTAAAGTAGGAG+TGG 0.557207 7_1:-71347378 Msa1035540:three_prime_UTR
CAGAAGGTCAATTTGATCAA+CGG 0.557550 7_1:+71350088 None:intergenic
GCTTTGTAAAGACTGTTAGC+AGG 0.559128 7_1:-71347344 Msa1035540:three_prime_UTR
AGAATTGGAACAATTAAAGA+GGG 0.560723 7_1:-71352880 Msa1035540:CDS
ACTAGCCTTGAGTAAAGACC+TGG 0.565005 7_1:-71347652 Msa1035540:CDS
TTGAGGTGTAGACGGTGTGC+TGG 0.565309 7_1:+71350840 None:intergenic
AACTGTGTAAAGTTAGAAGA+TGG 0.567071 7_1:-71352049 Msa1035540:intron
AGATCAATCAGGAGTATCAC+AGG 0.567626 7_1:-71349751 Msa1035540:intron
AAGTTCCAGGTCTTTACTCA+AGG 0.568518 7_1:+71347647 None:intergenic
GATAGAAGAGCTGAAGCAGA+AGG 0.568691 7_1:-71347970 Msa1035540:CDS
TGGTTACCATTGTCTGCTTG+AGG 0.568927 7_1:+71350823 None:intergenic
TCAAGAACAGCTTAATCAGA+AGG 0.570475 7_1:-71349179 Msa1035540:intron
CTTTGTTAGGCAGAATTCAA+CGG 0.572192 7_1:-71351976 Msa1035540:CDS
GGAAGAACTAACAGCATCAA+AGG 0.572480 7_1:-71347946 Msa1035540:CDS
TGCCAACATGTGGGTTCTTG+TGG 0.573523 7_1:-71347523 Msa1035540:CDS
ATTCTTGGAAGCAGCTAGCT+CGG 0.577355 7_1:+71347785 None:intergenic
TTCACTGCTACTTGATGAAG+GGG 0.577948 7_1:+71354736 None:intergenic
CATATCTTCCATACAAAAGG+CGG 0.577975 7_1:-71351726 Msa1035540:CDS
TTACCTTGACAAAGGAAACA+TGG 0.585504 7_1:-71348939 Msa1035540:CDS
AATGTGACTAGCTTTAGCTT+CGG 0.585540 7_1:+71354973 None:intergenic
ATATCTTCCATACAAAAGGC+GGG 0.590045 7_1:-71351725 Msa1035540:CDS
AGAAGAGCTGAAGCAGAAGG+TGG 0.592381 7_1:-71347967 Msa1035540:CDS
CCTACCCCACGTAGAACTAG+TGG 0.594025 7_1:-71347759 Msa1035540:CDS
CTGTTCCACTAGTTCTACGT+GGG 0.602586 7_1:+71347754 None:intergenic
TGATCAAATTGACCTTCTGA+GGG 0.603957 7_1:-71350084 Msa1035540:CDS
GGGAAAGTCTGGACTCCACA+TGG 0.604000 7_1:+71350803 None:intergenic
GACCTGTATGTTAATCTGGA+TGG 0.606866 7_1:-71351676 Msa1035540:CDS
CGAGCTTCAAAGAAAGATTG+AGG 0.608539 7_1:-71347583 Msa1035540:CDS
AGAAGAAGACAAAGAAACAT+GGG 0.609200 7_1:-71351618 Msa1035540:CDS
ACATGGACAGTACCAATGAA+GGG 0.611311 7_1:-71348922 Msa1035540:CDS
TTCATTAAAGAGGCTGTCTG+AGG 0.611519 7_1:-71350018 Msa1035540:CDS
GAGAAGAAGACAAAGAAACA+TGG 0.612800 7_1:-71351619 Msa1035540:CDS
GGTGAACTTTACCTTGACAA+AGG 0.615770 7_1:-71348947 Msa1035540:CDS
AGGGAATCTCAAGCAAGCAC+AGG 0.616546 7_1:-71348903 Msa1035540:intron
AATACAGGCAGCACAAAACA+AGG 0.621781 7_1:-71354666 Msa1035540:intron
TTTATCACTAGTGCCTGTCA+AGG 0.623935 7_1:+71350882 None:intergenic
TAATTTGGTTTGTATCTCTG+AGG 0.624044 7_1:-71347154 Msa1035540:three_prime_UTR
TGCCACAAGAACCCACATGT+TGG 0.625897 7_1:+71347521 None:intergenic
TCGGATATATGATCAGCAGA+TGG 0.629511 7_1:+71350757 None:intergenic
GTGCTTCAGTCTTCTCTCAG+TGG 0.629636 7_1:-71354923 Msa1035540:CDS
TTACAGATGCAATAGAGTTG+AGG 0.638781 7_1:-71349027 Msa1035540:CDS
TTGTCTGCTTGAGGTGTAGA+CGG 0.638922 7_1:+71350832 None:intergenic
AGACTTAGACGAAATGATCA+GGG 0.639411 7_1:-71347702 Msa1035540:CDS
AGCAGATGGAGAGCTTTCTG+CGG 0.649647 7_1:+71350771 None:intergenic
CCAATTAGCACACCATTCGG+AGG 0.651430 7_1:+71347196 None:intergenic
AAACGAACTTGCCAACATGT+GGG 0.653109 7_1:-71347532 Msa1035540:CDS
GCTGTTCCACTAGTTCTACG+TGG 0.658708 7_1:+71347753 None:intergenic
GGCACTAGTGATAAATCCAG+TGG 0.668906 7_1:-71350874 Msa1035540:CDS
TCTACACCTCAAGCAGACAA+TGG 0.670868 7_1:-71350829 Msa1035540:CDS
GTTGTGAATGATTGACTACA+GGG 0.677732 7_1:+71348996 None:intergenic
TGTTCCACTAGTTCTACGTG+GGG 0.684168 7_1:+71347755 None:intergenic
AGTTCAGCCAAAAGACATTG+GGG 0.685433 7_1:-71352847 Msa1035540:CDS
AGCAGACAATGGTAACCATG+TGG 0.686774 7_1:-71350818 Msa1035540:CDS
GAATTGGAACAATTAAAGAG+GGG 0.711261 7_1:-71352879 Msa1035540:CDS
AGACGATAAAGATATTCACG+AGG 0.734414 7_1:-71350728 Msa1035540:CDS
CCAAAGGAATGTCTTCTACG+GGG 0.736051 7_1:+71351887 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATAAAAATTACATCAA+GGG + chr7_1:71347452-71347471 None:intergenic 10.0%
!! TATTTATAAAAATTACATCA+AGG + chr7_1:71347453-71347472 None:intergenic 10.0%
!!! TTATAATATTTTTAGTTTTG+CGG - chr7_1:71347515-71347534 Msa1035540:CDS 10.0%
!!! GTTAAAATTAAAATTAGTTT+TGG - chr7_1:71348944-71348963 Msa1035540:CDS 10.0%
!!! AATTTAAAATGAAAAATGTA+GGG + chr7_1:71351823-71351842 None:intergenic 10.0%
!!! AATTATTTTGATTATGTTAT+TGG - chr7_1:71352375-71352394 Msa1035540:intron 10.0%
!! CTATAATGAAATTATTAATA+GGG + chr7_1:71352612-71352631 None:intergenic 10.0%
!! ACTATAATGAAATTATTAAT+AGG + chr7_1:71352613-71352632 None:intergenic 10.0%
!!! TTTTTTTTTGAAATAACACA+TGG + chr7_1:71348335-71348354 None:intergenic 15.0%
!!! TTTATTTTGTAGGAAAAATT+CGG + chr7_1:71348976-71348995 None:intergenic 15.0%
!! TAATTGTAAATAGTAAAACT+AGG - chr7_1:71349120-71349139 Msa1035540:intron 15.0%
!! GTAATATAGAAAATAACTAT+AGG + chr7_1:71349526-71349545 None:intergenic 15.0%
!! ATATTAAAAGCAATTAGAAA+GGG + chr7_1:71350610-71350629 None:intergenic 15.0%
!! TATATTAAAAGCAATTAGAA+AGG + chr7_1:71350611-71350630 None:intergenic 15.0%
!!! ACATTTTTAGTAAAATATTG+TGG - chr7_1:71350841-71350860 Msa1035540:CDS 15.0%
!!! CATTTTTAGTAAAATATTGT+GGG - chr7_1:71350842-71350861 Msa1035540:CDS 15.0%
!! TTACAAAAGAAAGTAATTAA+GGG + chr7_1:71351334-71351353 None:intergenic 15.0%
!!! GAATTTAAAATGAAAAATGT+AGG + chr7_1:71351824-71351843 None:intergenic 15.0%
!! TTAATTACCAAAAACATATA+GGG + chr7_1:71352231-71352250 None:intergenic 15.0%
!! TTAAAAATAATGTAACATCT+TGG - chr7_1:71352281-71352300 Msa1035540:intron 15.0%
!!! TGAAATTTTAATAGGAATTA+TGG + chr7_1:71352323-71352342 None:intergenic 15.0%
!!! CAATTTTCTGAAATTTTAAT+AGG + chr7_1:71352331-71352350 None:intergenic 15.0%
!! AAAAATTCAAAGTTATAAAC+AGG - chr7_1:71352955-71352974 Msa1035540:intron 15.0%
!!! TTTTACTTTTGAACTAATAA+AGG - chr7_1:71353710-71353729 Msa1035540:intron 15.0%
!! TAAATCTAATAAATTAGACT+TGG + chr7_1:71354098-71354117 None:intergenic 15.0%
!! AGAACATGATAAAAAATAAT+AGG + chr7_1:71354462-71354481 None:intergenic 15.0%
!! TTATGATAACTTCATTATTA+CGG - chr7_1:71354868-71354887 Msa1035540:intron 15.0%
!! TCTATTCGAAATAAATATAA+TGG - chr7_1:71355516-71355535 Msa1035540:intron 15.0%
!!! TTTTGTTTTGATTTTCAATG+AGG - chr7_1:71347212-71347231 Msa1035540:three_prime_UTR 20.0%
!!! ATTTCAAATTGCACATTTTA+AGG - chr7_1:71347305-71347324 Msa1035540:three_prime_UTR 20.0%
!!! TACATTTTAGCATTTAATGA+TGG - chr7_1:71347346-71347365 Msa1035540:three_prime_UTR 20.0%
!!! ACATTTTAGCATTTAATGAT+GGG - chr7_1:71347347-71347366 Msa1035540:three_prime_UTR 20.0%
!!! TTGATTTTATAAGATTGATG+TGG - chr7_1:71347564-71347583 Msa1035540:CDS 20.0%
!! AAGATAATTACAGTTAATCT+CGG + chr7_1:71348565-71348584 None:intergenic 20.0%
!!! TTGTACTCTTTTTATTTTGT+AGG + chr7_1:71348986-71349005 None:intergenic 20.0%
!! AAACAAATCATGATTATAAC+AGG + chr7_1:71349548-71349567 None:intergenic 20.0%
!!! TGAATGCTATTGATAATAAT+TGG + chr7_1:71349624-71349643 None:intergenic 20.0%
!!! AAATATGGGTTTTAGATAAA+AGG + chr7_1:71349669-71349688 None:intergenic 20.0%
!!! TTCAAAAAGTGTTTTTTGAA+TGG - chr7_1:71350904-71350923 Msa1035540:intron 20.0%
!! GATAAATAATTCTATGTCAA+TGG + chr7_1:71351167-71351186 None:intergenic 20.0%
!!! AAAATTTGCACTTTTGAAAA+TGG - chr7_1:71351196-71351215 Msa1035540:intron 20.0%
!!! ACTACTATTTTCAAATATGT+GGG + chr7_1:71351257-71351276 None:intergenic 20.0%
!!! TACTACTATTTTCAAATATG+TGG + chr7_1:71351258-71351277 None:intergenic 20.0%
!! CTTACAAAAGAAAGTAATTA+AGG + chr7_1:71351335-71351354 None:intergenic 20.0%
!!! CTTAATTACTTTCTTTTGTA+AGG - chr7_1:71351333-71351352 Msa1035540:intron 20.0%
!! TAAGGAAAAAAAAATCATGA+AGG - chr7_1:71351351-71351370 Msa1035540:intron 20.0%
!! AAGGAAAAAAAAATCATGAA+GGG - chr7_1:71351352-71351371 Msa1035540:intron 20.0%
!!! GTTAATTACTTTCTTTTGTA+AGG - chr7_1:71351381-71351400 Msa1035540:intron 20.0%
!! AAGGAAAAAATAAATCATGA+AGG - chr7_1:71351400-71351419 Msa1035540:intron 20.0%
!! AGGAAAAAATAAATCATGAA+GGG - chr7_1:71351401-71351420 Msa1035540:intron 20.0%
!! GATTTAATAATAACGATGAA+AGG + chr7_1:71352152-71352171 None:intergenic 20.0%
!! CTTAATTACCAAAAACATAT+AGG + chr7_1:71352232-71352251 None:intergenic 20.0%
!!! ATGATCTAAAAGAGTATTTT+AGG + chr7_1:71352257-71352276 None:intergenic 20.0%
!!! ATGCATTTTACTTCTTTATT+AGG - chr7_1:71352352-71352371 Msa1035540:intron 20.0%
!!! TTCACTATTTTTATCAGAAA+CGG - chr7_1:71352672-71352691 Msa1035540:intron 20.0%
!! AAAAGTTCATTAAATACCAA+AGG + chr7_1:71352905-71352924 None:intergenic 20.0%
!! ATGAATTATTAGCATAATTG+AGG + chr7_1:71353084-71353103 None:intergenic 20.0%
!!! AGTCTTCTTATTTTACAAAT+GGG - chr7_1:71354069-71354088 Msa1035540:intron 20.0%
!! TATTGTGCATTAGTTATATT+GGG + chr7_1:71354345-71354364 None:intergenic 20.0%
!! ATATTGTGCATTAGTTATAT+TGG + chr7_1:71354346-71354365 None:intergenic 20.0%
!! ATCTTATACAAATATTATGC+AGG + chr7_1:71355285-71355304 None:intergenic 20.0%
!!! AATTTTGATTAGTGATAAAG+TGG - chr7_1:71355431-71355450 Msa1035540:intron 20.0%
!!! CATTACAATTTGTTTAAAGT+AGG - chr7_1:71356201-71356220 Msa1035540:intron 20.0%
!! AATTAACTATGCTCATAAAA+GGG + chr7_1:71356415-71356434 None:intergenic 20.0%
!! AAATTAACTATGCTCATAAA+AGG + chr7_1:71356416-71356435 None:intergenic 20.0%
!!! TTTTATGAGCATAGTTAATT+TGG - chr7_1:71356415-71356434 Msa1035540:intron 20.0%
!! CTAAAAGTATGAATATAAGC+AGG - chr7_1:71347189-71347208 Msa1035540:three_prime_UTR 25.0%
!!! ATCTTTTAGAACTAATGGAA+CGG + chr7_1:71347241-71347260 None:intergenic 25.0%
!!! ATGCAATCTTTTAGAACTAA+TGG + chr7_1:71347246-71347265 None:intergenic 25.0%
! CTAAAAGATTGCATTTAATG+TGG - chr7_1:71347252-71347271 Msa1035540:three_prime_UTR 25.0%
!!! TTTAAGGAGGGAATTTTTTT+AGG - chr7_1:71347321-71347340 Msa1035540:three_prime_UTR 25.0%
!!! TTAAGGAGGGAATTTTTTTA+GGG - chr7_1:71347322-71347341 Msa1035540:three_prime_UTR 25.0%
!!! GTAACAGCTTTTAAGAATAA+GGG - chr7_1:71347409-71347428 Msa1035540:three_prime_UTR 25.0%
! TTAAGAATAAGGGATTATGA+CGG - chr7_1:71347419-71347438 Msa1035540:exon 25.0%
!! ATATTATAAGTTGACACTAC+TGG + chr7_1:71347504-71347523 None:intergenic 25.0%
! ACAATATCAACAATATTCCT+CGG + chr7_1:71347914-71347933 None:intergenic 25.0%
! ACAATATTGTTTCATCATGT+TGG - chr7_1:71347961-71347980 Msa1035540:CDS 25.0%
!!! NNNTAGAATTTTGGTACTGT+TGG - chr7_1:71348122-71348141 Msa1035540:intron 25.0%
!! AGCTAGAAAGTTGAATTTTT+AGG - chr7_1:71348163-71348182 Msa1035540:intron 25.0%
!! ATAATTGTTTGTTGACAAGT+AGG - chr7_1:71348402-71348421 Msa1035540:intron 25.0%
!! TAATTGTTTGTTGACAAGTA+GGG - chr7_1:71348403-71348422 Msa1035540:intron 25.0%
!! CAAAATAAAAAGAGTACAAC+TGG - chr7_1:71348987-71349006 Msa1035540:CDS 25.0%
! ATTTACAATTACAAGAACTG+AGG + chr7_1:71349111-71349130 None:intergenic 25.0%
! GTTGTTCACGTAATATATAT+CGG - chr7_1:71349237-71349256 Msa1035540:intron 25.0%
! AGTTGATTATTATGTGACTA+TGG - chr7_1:71349315-71349334 Msa1035540:intron 25.0%
! ACGTCTTATGTATATAATCT+AGG + chr7_1:71349358-71349377 None:intergenic 25.0%
!!! GATACTCTAAGATTAGAAAA+TGG + chr7_1:71349492-71349511 None:intergenic 25.0%
!!! AAAACCCATATTTTTCGATA+TGG - chr7_1:71349676-71349695 Msa1035540:intron 25.0%
! ATAAGTTGTTAACCAAAGAT+AGG - chr7_1:71350226-71350245 Msa1035540:intron 25.0%
! AATCTTCTTTATGTCTGAAA+AGG + chr7_1:71350406-71350425 None:intergenic 25.0%
!!! AAGCATTCTAAAATATCTAC+AGG + chr7_1:71350515-71350534 None:intergenic 25.0%
! TGGAATCTTCTATAAGAAAA+GGG + chr7_1:71350576-71350595 None:intergenic 25.0%
! ATGGAATCTTCTATAAGAAA+AGG + chr7_1:71350577-71350596 None:intergenic 25.0%
! AAGAATTGGAACAATTAAAG+AGG - chr7_1:71350703-71350722 Msa1035540:CDS 25.0%
! AGAATTGGAACAATTAAAGA+GGG - chr7_1:71350704-71350723 Msa1035540:CDS 25.0%
! ATGGTTATAGACAGTAATAA+AGG + chr7_1:71351127-71351146 None:intergenic 25.0%
!!! TAGTACATTTCTCTCTTTTT+TGG - chr7_1:71351219-71351238 Msa1035540:intron 25.0%
! TTTGCCTTTGATATATATGT+GGG + chr7_1:71351311-71351330 None:intergenic 25.0%
! GAATTGTGAAGTAAATTTAC+TGG - chr7_1:71351452-71351471 Msa1035540:intron 25.0%
!! AATTAGCATTCTGATTTGAA+TGG - chr7_1:71351501-71351520 Msa1035540:intron 25.0%
!!! TGTTTGCTATTTCTAATGAT+AGG - chr7_1:71352029-71352048 Msa1035540:CDS 25.0%
!!! GTTTGCTATTTCTAATGATA+GGG - chr7_1:71352030-71352049 Msa1035540:CDS 25.0%
! ATGAAATTTCAAGCTTTCTA+TGG - chr7_1:71352460-71352479 Msa1035540:intron 25.0%
! TGAAATTTCAAGCTTTCTAT+GGG - chr7_1:71352461-71352480 Msa1035540:intron 25.0%
! ATTAATAGGGTTATGTAAGA+TGG + chr7_1:71352599-71352618 None:intergenic 25.0%
!!! TCACTATTTTTATCAGAAAC+GGG - chr7_1:71352673-71352692 Msa1035540:intron 25.0%
!! AAAGAATTCAAGTGACTTTT+AGG + chr7_1:71353043-71353062 None:intergenic 25.0%
! ACATACCAAATACATAATCT+TGG + chr7_1:71353189-71353208 None:intergenic 25.0%
! TATTACTATTCCTTATCATC+TGG - chr7_1:71353238-71353257 Msa1035540:intron 25.0%
! CTGAAAAGAGAGAAATATAA+TGG - chr7_1:71353385-71353404 Msa1035540:intron 25.0%
!!! AGAGAAATATAATGGATATG+TGG - chr7_1:71353393-71353412 Msa1035540:intron 25.0%
!! TTCATTCAAGTTCATTAAAG+AGG - chr7_1:71353556-71353575 Msa1035540:intron 25.0%
!!! ACATGAATCTGATTATTTTG+AGG + chr7_1:71353606-71353625 None:intergenic 25.0%
! CAAAATAATCAGATTCATGT+TGG - chr7_1:71353606-71353625 Msa1035540:intron 25.0%
! AGTTCAAAAGTAAAACTTTC+AGG + chr7_1:71353705-71353724 None:intergenic 25.0%
!! TACTTTTGAACTAATAAAGG+TGG - chr7_1:71353713-71353732 Msa1035540:intron 25.0%
! AAGGTTGAAAGATGAAATTA+AGG - chr7_1:71353743-71353762 Msa1035540:intron 25.0%
! AACATATAATTGCATTAGAC+AGG - chr7_1:71354008-71354027 Msa1035540:intron 25.0%
!!! CAGTCTTCTTATTTTACAAA+TGG - chr7_1:71354068-71354087 Msa1035540:intron 25.0%
! TGTCAATAATTTGACACAAT+TGG - chr7_1:71354187-71354206 Msa1035540:intron 25.0%
! TAAGCTGTTCTTGAATTATA+CGG + chr7_1:71354399-71354418 None:intergenic 25.0%
! GAAAATAAGTCTCACTAAAT+AGG - chr7_1:71354970-71354989 Msa1035540:CDS 25.0%
! TAATAGAACCCATTATTTAG+TGG - chr7_1:71354993-71355012 Msa1035540:intron 25.0%
! AATAGAACCCATTATTTAGT+GGG - chr7_1:71354994-71355013 Msa1035540:intron 25.0%
! AGGAGGAAAATATTAATTAC+CGG - chr7_1:71355137-71355156 Msa1035540:intron 25.0%
!!! AGACAATTATTTTCAAGTCA+GGG + chr7_1:71355361-71355380 None:intergenic 25.0%
!!! TAGACAATTATTTTCAAGTC+AGG + chr7_1:71355362-71355381 None:intergenic 25.0%
!!! TTAACAAACTAAAAGCACTT+GGG + chr7_1:71355399-71355418 None:intergenic 25.0%
! AAAGAGAATTTGCAATTTGA+TGG - chr7_1:71356134-71356153 Msa1035540:intron 25.0%
!! TTTGATGTGATTTTGTATAG+TGG - chr7_1:71356165-71356184 Msa1035540:intron 25.0%
!!! TAGGCATCAATTTTTAAAGA+CGG - chr7_1:71356476-71356495 Msa1035540:intron 25.0%
ATTTAATGTGGCATGAGAAT+AGG - chr7_1:71347264-71347283 Msa1035540:three_prime_UTR 30.0%
!! TCAAATTGCACATTTTAAGG+AGG - chr7_1:71347308-71347327 Msa1035540:three_prime_UTR 30.0%
!! CAAATTGCACATTTTAAGGA+GGG - chr7_1:71347309-71347328 Msa1035540:three_prime_UTR 30.0%
!! ATTTAATGATGGGTGATTAG+AGG - chr7_1:71347357-71347376 Msa1035540:three_prime_UTR 30.0%
!! TTTAATGATGGGTGATTAGA+GGG - chr7_1:71347358-71347377 Msa1035540:three_prime_UTR 30.0%
!! CGTAACAGCTTTTAAGAATA+AGG - chr7_1:71347408-71347427 Msa1035540:three_prime_UTR 30.0%
AACTCTCCCTATAAGTATTA+GGG + chr7_1:71347726-71347745 None:intergenic 30.0%
TAACTCTCCCTATAAGTATT+AGG + chr7_1:71347727-71347746 None:intergenic 30.0%
! TTTTTGTGTGTGTGTAAACT+AGG + chr7_1:71347808-71347827 None:intergenic 30.0%
! CTAGCTCTTACTACAAAAAA+TGG + chr7_1:71348215-71348234 None:intergenic 30.0%
!! GTTGAATTTTAGCACATGAT+AGG - chr7_1:71348238-71348257 Msa1035540:intron 30.0%
!! AATTTTAGCACATGATAGGT+GGG - chr7_1:71348242-71348261 Msa1035540:intron 30.0%
!!! AGATTTTAAGTTACGACACA+TGG + chr7_1:71348370-71348389 None:intergenic 30.0%
! AATTGTTTGTTGACAAGTAG+GGG - chr7_1:71348404-71348423 Msa1035540:intron 30.0%
TATGTTGGACACTAACAAAT+GGG - chr7_1:71348445-71348464 Msa1035540:intron 30.0%
TGAATACAACAGCATAAATG+AGG + chr7_1:71348513-71348532 None:intergenic 30.0%
ATTTATGCTGTTGTATTCAG+TGG - chr7_1:71348514-71348533 Msa1035540:intron 30.0%
TGTAATTATCTTTGTTGCAC+AGG - chr7_1:71348573-71348592 Msa1035540:intron 30.0%
TTTCATAACACACATCTTTG+TGG - chr7_1:71348755-71348774 Msa1035540:intron 30.0%
TAACTATACGTATACAGAGT+CGG - chr7_1:71349211-71349230 Msa1035540:intron 30.0%
AGTATTGTACTTTATTGCCT+AGG - chr7_1:71349465-71349484 Msa1035540:intron 30.0%
TAAGATTAGAAAATGGTCCT+AGG + chr7_1:71349485-71349504 None:intergenic 30.0%
!!! TATGGGTTTTAGATAAAAGG+AGG + chr7_1:71349666-71349685 None:intergenic 30.0%
GATGCCATATCGAAAAATAT+GGG + chr7_1:71349683-71349702 None:intergenic 30.0%
TGATGCCATATCGAAAAATA+TGG + chr7_1:71349684-71349703 None:intergenic 30.0%
! TGCAATTGTTTTCTCACTAA+TGG - chr7_1:71349871-71349890 Msa1035540:intron 30.0%
! TTTGAGTCTGTACTTTTCTT+TGG - chr7_1:71349932-71349951 Msa1035540:intron 30.0%
AAAATGATCAAGATAGACTC+AGG + chr7_1:71349971-71349990 None:intergenic 30.0%
TTCATTTGCAGATCTATTGT+TGG - chr7_1:71350065-71350084 Msa1035540:CDS 30.0%
AGTTTCAAGATTCAGTTGTT+GGG - chr7_1:71350270-71350289 Msa1035540:intron 30.0%
AAAAGGTAATATTGAGGACT+TGG + chr7_1:71350389-71350408 None:intergenic 30.0%
TGTCTGAAAAGGTAATATTG+AGG + chr7_1:71350395-71350414 None:intergenic 30.0%
! TTTAGAATGCTTGAAAAGCT+AGG - chr7_1:71350523-71350542 Msa1035540:intron 30.0%
GGAATCTTCTATAAGAAAAG+GGG + chr7_1:71350575-71350594 None:intergenic 30.0%
!! TTAAGCATTGAATCTCTTGT+TGG + chr7_1:71350680-71350699 None:intergenic 30.0%
ACAAGAGATTCAATGCTTAA+AGG - chr7_1:71350680-71350699 Msa1035540:intron 30.0%
TCAATGCTTAAAGGAAGAAT+TGG - chr7_1:71350689-71350708 Msa1035540:intron 30.0%
GAATTGGAACAATTAAAGAG+GGG - chr7_1:71350705-71350724 Msa1035540:CDS 30.0%
!!! CATTACCTACCTTTTGTTTT+AGG + chr7_1:71350779-71350798 None:intergenic 30.0%
TAAGAGACAAACAAAACAGA+AGG + chr7_1:71350819-71350838 None:intergenic 30.0%
!!! TTCTGTTTTGTTTGTCTCTT+AGG - chr7_1:71350818-71350837 Msa1035540:CDS 30.0%
! CCTATTTATGACCAACTTTT+TGG + chr7_1:71350936-71350955 None:intergenic 30.0%
! CCAAAAAGTTGGTCATAAAT+AGG - chr7_1:71350933-71350952 Msa1035540:intron 30.0%
!!! TACATTTCTCTCTTTTTTGG+TGG - chr7_1:71351222-71351241 Msa1035540:intron 30.0%
GTTTGCCTTTGATATATATG+TGG + chr7_1:71351312-71351331 None:intergenic 30.0%
AACTGTGTAAAGTTAGAAGA+TGG - chr7_1:71351535-71351554 Msa1035540:intron 30.0%
AATGTAAGTTCCTGGTATTT+GGG + chr7_1:71351768-71351787 None:intergenic 30.0%
AAATGTAAGTTCCTGGTATT+TGG + chr7_1:71351769-71351788 None:intergenic 30.0%
CTAAAAGAAATGTAAGTTCC+TGG + chr7_1:71351776-71351795 None:intergenic 30.0%
! TTTAAATTCTTGTTTGCAGC+TGG - chr7_1:71351835-71351854 Msa1035540:intron 30.0%
TATTGACCTGTATGTTAATC+TGG - chr7_1:71351904-71351923 Msa1035540:CDS 30.0%
AGAAGAAGACAAAGAAACAT+GGG - chr7_1:71351966-71351985 Msa1035540:CDS 30.0%
TTAGAAATAGCAAACAGCAA+TGG + chr7_1:71352025-71352044 None:intergenic 30.0%
TAAATGCAACCTATACAACT+TGG + chr7_1:71352099-71352118 None:intergenic 30.0%
! TTTACCACCCTATATGTTTT+TGG - chr7_1:71352221-71352240 Msa1035540:intron 30.0%
ATTACCAAAAACATATAGGG+TGG + chr7_1:71352228-71352247 None:intergenic 30.0%
TATTCACGAGGATAGTTTAT+TGG - chr7_1:71352868-71352887 Msa1035540:CDS 30.0%
ATTCACGAGGATAGTTTATT+GGG - chr7_1:71352869-71352888 Msa1035540:CDS 30.0%
!! TTCTTTTCTTATTGCTGCTT+TGG - chr7_1:71352930-71352949 Msa1035540:CDS 30.0%
!!! TCTTTTCTTATTGCTGCTTT+GGG - chr7_1:71352931-71352950 Msa1035540:CDS 30.0%
!!! GCATATGTTTTGACAAAAAC+TGG - chr7_1:71352997-71353016 Msa1035540:intron 30.0%
GAAACTTCTATGGAAAGAAA+GGG + chr7_1:71353159-71353178 None:intergenic 30.0%
AGAAACTTCTATGGAAAGAA+AGG + chr7_1:71353160-71353179 None:intergenic 30.0%
AGTGTCCAAGATTATGTATT+TGG - chr7_1:71353181-71353200 Msa1035540:intron 30.0%
CTAATGATTACCAGATGATA+AGG + chr7_1:71353251-71353270 None:intergenic 30.0%
ATCATTAGACCTAAAAGAGT+TGG - chr7_1:71353263-71353282 Msa1035540:intron 30.0%
! TAACATGTACCAACTCTTTT+AGG + chr7_1:71353275-71353294 None:intergenic 30.0%
AACAAAAGTGACATCTAGTA+AGG + chr7_1:71353449-71353468 None:intergenic 30.0%
!!! AGATGTCACTTTTGTTTTCT+CGG - chr7_1:71353453-71353472 Msa1035540:intron 30.0%
TAATAAAGGTGGAGATGAAA+AGG - chr7_1:71353724-71353743 Msa1035540:intron 30.0%
TGATAAATCCTTTGAACTTG+AGG - chr7_1:71353953-71353972 Msa1035540:intron 30.0%
TGTTGAAAAACATTAGCACA+TGG + chr7_1:71353992-71354011 None:intergenic 30.0%
! CTTTTCAATTGAATTCCATC+TGG + chr7_1:71354038-71354057 None:intergenic 30.0%
AGAAATGCTGTTGTATTGTT+AGG - chr7_1:71354244-71354263 Msa1035540:intron 30.0%
!!! AGGTATATTTTTTCACCTTG+TGG - chr7_1:71354701-71354720 Msa1035540:CDS 30.0%
GCATTGTAATCATTCTTAAG+GGG + chr7_1:71354815-71354834 None:intergenic 30.0%
GGCATTGTAATCATTCTTAA+GGG + chr7_1:71354816-71354835 None:intergenic 30.0%
CCATGATTGTTGTATCATAA+GGG + chr7_1:71354837-71354856 None:intergenic 30.0%
!! AGACTTATTTTCAAAGTGGT+GGG + chr7_1:71354962-71354981 None:intergenic 30.0%
!! AGTGAGACTTATTTTCAAAG+TGG + chr7_1:71354966-71354985 None:intergenic 30.0%
AATAAATCTTTGCACCAAAG+AGG + chr7_1:71355086-71355105 None:intergenic 30.0%
TTGGTGCAAAGATTTATTTC+AGG - chr7_1:71355088-71355107 Msa1035540:intron 30.0%
! TGCAAAGATTTATTTCAGGT+GGG - chr7_1:71355092-71355111 Msa1035540:intron 30.0%
TATTAATTACCGGTCTACAA+TGG - chr7_1:71355147-71355166 Msa1035540:intron 30.0%
TATTACATGTGCATGATGAA+CGG - chr7_1:71355220-71355239 Msa1035540:intron 30.0%
ATGCTTTCCAGAATCAAAAT+CGG + chr7_1:71355320-71355339 None:intergenic 30.0%
!! CTTAACAAACTAAAAGCACT+TGG + chr7_1:71355400-71355419 None:intergenic 30.0%
!!! CAAGTGCTTTTAGTTTGTTA+AGG - chr7_1:71355398-71355417 Msa1035540:intron 30.0%
!!! ATCTAGTGCTCGTTTTAATT+AGG - chr7_1:71355584-71355603 Msa1035540:intron 30.0%
AAGAGAGTTCATATGCTAAA+GGG - chr7_1:71355694-71355713 Msa1035540:intron 30.0%
! CAATTTGTTTAAAGTAGGAG+TGG - chr7_1:71356206-71356225 Msa1035540:intron 30.0%
AGGAACGAAGAAAAAAAAGA+AGG + chr7_1:71356371-71356390 None:intergenic 30.0%
!! TAATTTGGTTTGTATCTCTG+AGG - chr7_1:71356430-71356449 Msa1035540:intron 30.0%
!!! ACAATTTTTAAAGCGTGGAA+AGG - chr7_1:71356453-71356472 Msa1035540:intron 30.0%
ACGCACAAATAATTTCTGAG+TGG - chr7_1:71347138-71347157 Msa1035540:three_prime_UTR 35.0%
TGAGTGGATATTAAAAGCTG+AGG - chr7_1:71347154-71347173 Msa1035540:three_prime_UTR 35.0%
TGGATATTAAAAGCTGAGGA+AGG - chr7_1:71347158-71347177 Msa1035540:three_prime_UTR 35.0%
ATATTAAAAGCTGAGGAAGG+TGG - chr7_1:71347161-71347180 Msa1035540:three_prime_UTR 35.0%
GTGATTAGAGGGAAAAATCT+AGG - chr7_1:71347369-71347388 Msa1035540:three_prime_UTR 35.0%
CAGCATCCCTAATACTTATA+GGG - chr7_1:71347717-71347736 Msa1035540:CDS 35.0%
TGTTGTTCACACATTAGAGA+AGG - chr7_1:71347840-71347859 Msa1035540:CDS 35.0%
TGTTTCATCATGTTGGAAAG+TGG - chr7_1:71347968-71347987 Msa1035540:CDS 35.0%
! CTAGCTCTTGCTACAAAAAA+TGG + chr7_1:71348149-71348168 None:intergenic 35.0%
CTACAAAAAATGGAGCAGAA+AGG + chr7_1:71348205-71348224 None:intergenic 35.0%
!! GAATTTTAGCACATGATAGG+TGG - chr7_1:71348241-71348260 Msa1035540:intron 35.0%
CAACATACAATCAATCCACT+TGG + chr7_1:71348432-71348451 None:intergenic 35.0%
!! CAAGTGGATTGATTGTATGT+TGG - chr7_1:71348430-71348449 Msa1035540:intron 35.0%
GTATGTTGGACACTAACAAA+TGG - chr7_1:71348444-71348463 Msa1035540:intron 35.0%
!! AATGTGACTAGCTTTAGCTT+CGG + chr7_1:71348614-71348633 None:intergenic 35.0%
AAGCTAGTCACATTCCATAT+AGG - chr7_1:71348620-71348639 Msa1035540:intron 35.0%
AGCTAGTCACATTCCATATA+GGG - chr7_1:71348621-71348640 Msa1035540:intron 35.0%
! ATACATTGAAGTTTGCTCAC+CGG - chr7_1:71348881-71348900 Msa1035540:intron 35.0%
GTATTTCAATATGCTTTGCC+CGG + chr7_1:71348903-71348922 None:intergenic 35.0%
GGCAAAGCATATTGAAATAC+AGG - chr7_1:71348903-71348922 Msa1035540:intron 35.0%
GAAGATTAGTAGTTGAATCC+TGG + chr7_1:71349028-71349047 None:intergenic 35.0%
ATTGTATCTTCTGTAGTCGT+GGG + chr7_1:71349067-71349086 None:intergenic 35.0%
AATTGTATCTTCTGTAGTCG+TGG + chr7_1:71349068-71349087 None:intergenic 35.0%
! GATTTGTTTCCTTGTTTCCA+TGG - chr7_1:71349559-71349578 Msa1035540:intron 35.0%
ATACAGAAGACTAAACACCA+TGG + chr7_1:71349579-71349598 None:intergenic 35.0%
! TGCTGAATTCCCTAAAGTTT+TGG - chr7_1:71349748-71349767 Msa1035540:intron 35.0%
! GCTGAATTCCCTAAAGTTTT+GGG - chr7_1:71349749-71349768 Msa1035540:intron 35.0%
AGTCACAAAAGAACCAAACA+TGG + chr7_1:71349795-71349814 None:intergenic 35.0%
CATGACAAACATCAAAGAAG+AGG + chr7_1:71349853-71349872 None:intergenic 35.0%
!! TCACTAATGGATTATAGCAG+CGG - chr7_1:71349884-71349903 Msa1035540:intron 35.0%
! AGTACTTATCTAAGACAGGA+GGG + chr7_1:71350000-71350019 None:intergenic 35.0%
AGCAAAATTGTCTTGAACCT+GGG + chr7_1:71350038-71350057 None:intergenic 35.0%
TAGATCTGCAAATGAAGAGT+AGG + chr7_1:71350061-71350080 None:intergenic 35.0%
! ATTCATTGCTGGCCTATATA+AGG + chr7_1:71350118-71350137 None:intergenic 35.0%
TATATAGGCCAGCAATGAAT+TGG - chr7_1:71350118-71350137 Msa1035540:intron 35.0%
GAGTTTCAAGATTCAGTTGT+TGG - chr7_1:71350269-71350288 Msa1035540:intron 35.0%
GTTTCAAGATTCAGTTGTTG+GGG - chr7_1:71350271-71350290 Msa1035540:intron 35.0%
TTTCAAGATTCAGTTGTTGG+GGG - chr7_1:71350272-71350291 Msa1035540:intron 35.0%
AAGAAGATTGATGTCTGATG+AGG - chr7_1:71350417-71350436 Msa1035540:intron 35.0%
CAATTAGAAAGGGAACAGAA+GGG + chr7_1:71350600-71350619 None:intergenic 35.0%
CATTGTGCTCCTAAAACAAA+AGG - chr7_1:71350767-71350786 Msa1035540:CDS 35.0%
AATGGATGTGTCCAAAAAGT+TGG - chr7_1:71350922-71350941 Msa1035540:intron 35.0%
GGTTATAGACTCTATGTCAA+TGG + chr7_1:71351146-71351165 None:intergenic 35.0%
!!! ATTTCTCTCTTTTTTGGTGG+TGG - chr7_1:71351225-71351244 Msa1035540:intron 35.0%
!!! TAGTACAGTCCTCTCTTTTT+TGG - chr7_1:71351273-71351292 Msa1035540:intron 35.0%
TGAGCCCACATATATATCAA+AGG - chr7_1:71351304-71351323 Msa1035540:intron 35.0%
CTTTGTTAGGCAGAATTCAA+CGG - chr7_1:71351608-71351627 Msa1035540:CDS 35.0%
!!! ACGGTTGACTAAGTTGATTT+TGG - chr7_1:71351627-71351646 Msa1035540:CDS 35.0%
TGGCATATCTTCCATACAAA+AGG - chr7_1:71351855-71351874 Msa1035540:intron 35.0%
CATATCTTCCATACAAAAGG+CGG - chr7_1:71351858-71351877 Msa1035540:intron 35.0%
ATATCTTCCATACAAAAGGC+GGG - chr7_1:71351859-71351878 Msa1035540:intron 35.0%
! ATTAAATCCCGCCTTTTGTA+TGG + chr7_1:71351869-71351888 None:intergenic 35.0%
!! GCGGGATTTAATTTTAGAAG+AGG - chr7_1:71351877-71351896 Msa1035540:CDS 35.0%
TTCCATCCAGATTAACATAC+AGG + chr7_1:71351913-71351932 None:intergenic 35.0%
! TTTGTCTTCTTCTCCTCTTT+TGG + chr7_1:71351959-71351978 None:intergenic 35.0%
GAGAAGAAGACAAAGAAACA+TGG - chr7_1:71351965-71351984 Msa1035540:CDS 35.0%
! AGAAACATGGGCTACTAAAT+TGG - chr7_1:71351978-71351997 Msa1035540:CDS 35.0%
!!! GTTGCTTTTCCAAGTTGTAT+AGG - chr7_1:71352087-71352106 Msa1035540:intron 35.0%
GTTATGTAAGATGGTCAACA+AGG + chr7_1:71352590-71352609 None:intergenic 35.0%
AGACGATAAAGATATTCACG+AGG - chr7_1:71352856-71352875 Msa1035540:CDS 35.0%
!!! CTTTTCTTATTGCTGCTTTG+GGG - chr7_1:71352932-71352951 Msa1035540:CDS 35.0%
AGCATAATTGAGGTTGTTTG+TGG + chr7_1:71353074-71353093 None:intergenic 35.0%
CAGAAGGTCAATTTGATCAA+CGG + chr7_1:71353499-71353518 None:intergenic 35.0%
TTGATCAAATTGACCTTCTG+AGG - chr7_1:71353499-71353518 Msa1035540:intron 35.0%
TGATCAAATTGACCTTCTGA+GGG - chr7_1:71353500-71353519 Msa1035540:intron 35.0%
GAGTGAACAAATAGATTTGC+TGG - chr7_1:71353770-71353789 Msa1035540:intron 35.0%
CTTACTTGCAGACTTAATAC+TGG - chr7_1:71353885-71353904 Msa1035540:intron 35.0%
!! TACTGGTTGTTTTGTACTTC+AGG - chr7_1:71353902-71353921 Msa1035540:intron 35.0%
AACTGTTACCTCAAGTTCAA+AGG + chr7_1:71353964-71353983 None:intergenic 35.0%
CTTTAGCAGTTAAAACAGCT+AGG + chr7_1:71354273-71354292 None:intergenic 35.0%
GCACAATATTCTGCTAATTC+AGG - chr7_1:71354357-71354376 Msa1035540:intron 35.0%
TCAAGAACAGCTTAATCAGA+AGG - chr7_1:71354405-71354424 Msa1035540:intron 35.0%
TTACAGATGCAATAGAGTTG+AGG - chr7_1:71354557-71354576 Msa1035540:intron 35.0%
GTTGTGAATGATTGACTACA+GGG + chr7_1:71354591-71354610 None:intergenic 35.0%
TGTTGTGAATGATTGACTAC+AGG + chr7_1:71354592-71354611 None:intergenic 35.0%
AATCATTCACAACATTTCCC+TGG - chr7_1:71354598-71354617 Msa1035540:intron 35.0%
TTACCTTGACAAAGGAAACA+TGG - chr7_1:71354645-71354664 Msa1035540:intron 35.0%
! GGGCATTGTAATCATTCTTA+AGG + chr7_1:71354817-71354836 None:intergenic 35.0%
CCCTTATGATACAACAATCA+TGG - chr7_1:71354834-71354853 Msa1035540:intron 35.0%
GCCATGATTGTTGTATCATA+AGG + chr7_1:71354838-71354857 None:intergenic 35.0%
CCTCATCATAAATTGAGTGT+TGG + chr7_1:71354919-71354938 None:intergenic 35.0%
CCAACACTCAATTTATGATG+AGG - chr7_1:71354916-71354935 Msa1035540:CDS 35.0%
ATGATGAGGTGAAACTTATG+TGG - chr7_1:71354930-71354949 Msa1035540:CDS 35.0%
TGATGAGGTGAAACTTATGT+GGG - chr7_1:71354931-71354950 Msa1035540:CDS 35.0%
!! TTATTTTCAAAGTGGTGGGA+GGG + chr7_1:71354958-71354977 None:intergenic 35.0%
!! GAGACTTATTTTCAAAGTGG+TGG + chr7_1:71354963-71354982 None:intergenic 35.0%
!! TTCAACACTAGCTCTATGAT+TGG + chr7_1:71355037-71355056 None:intergenic 35.0%
! AATCATAGAGCTAGTGTTGA+AGG - chr7_1:71355036-71355055 Msa1035540:intron 35.0%
! ATCATAGAGCTAGTGTTGAA+GGG - chr7_1:71355037-71355056 Msa1035540:intron 35.0%
GTGCAAAGATTTATTTCAGG+TGG - chr7_1:71355091-71355110 Msa1035540:intron 35.0%
CTAGATAATCCATTGTAGAC+CGG + chr7_1:71355159-71355178 None:intergenic 35.0%
ATTACATGTGCATGATGAAC+GGG - chr7_1:71355221-71355240 Msa1035540:intron 35.0%
!!! AATGCATCCGATTTTGATTC+TGG - chr7_1:71355310-71355329 Msa1035540:intron 35.0%
GAAGAGAGTTCATATGCTAA+AGG - chr7_1:71355693-71355712 Msa1035540:intron 35.0%
CTCATTATGGTTCATGAGTT+TGG + chr7_1:71355769-71355788 None:intergenic 35.0%
CGGTAGATAATCTCTCATTA+TGG + chr7_1:71355782-71355801 None:intergenic 35.0%
TAGACTTAGACGAAATGATC+AGG - chr7_1:71355881-71355900 Msa1035540:intron 35.0%
AGACTTAGACGAAATGATCA+GGG - chr7_1:71355882-71355901 Msa1035540:intron 35.0%
CTTAGAAAGAGATCAGAAAG+AGG - chr7_1:71355977-71355996 Msa1035540:intron 35.0%
! AAAACAAAGAGAAGCATACC+TGG - chr7_1:71356028-71356047 Msa1035540:intron 35.0%
GCAAAGCTTAAAAAGTCACA+AGG - chr7_1:71356083-71356102 Msa1035540:intron 35.0%
GAAGAAAAAAAAGAAGGCTG+GGG + chr7_1:71356365-71356384 None:intergenic 35.0%
CGAAGAAAAAAAAGAAGGCT+GGG + chr7_1:71356366-71356385 None:intergenic 35.0%
ACGAAGAAAAAAAAGAAGGC+TGG + chr7_1:71356367-71356386 None:intergenic 35.0%
!!! TGAGGACAATTTTTAAAGCG+TGG - chr7_1:71356448-71356467 Msa1035540:intron 35.0%
!!! TTTTTAAAGCGTGGAAAGGT+AGG - chr7_1:71356457-71356476 Msa1035540:intron 35.0%
AATGTGGCATGAGAATAGGA+AGG - chr7_1:71347268-71347287 Msa1035540:three_prime_UTR 40.0%
ATGTGGCATGAGAATAGGAA+GGG - chr7_1:71347269-71347288 Msa1035540:three_prime_UTR 40.0%
GCAGCATCCCTAATACTTAT+AGG - chr7_1:71347716-71347735 Msa1035540:CDS 40.0%
TTCACACATTAGAGAAGGCT+GGG - chr7_1:71347845-71347864 Msa1035540:CDS 40.0%
! AAAATACCTTTTTGCCCCCT+CGG - chr7_1:71347878-71347897 Msa1035540:CDS 40.0%
AAGAGTCCTTTGGACTTGAA+GGG + chr7_1:71348280-71348299 None:intergenic 40.0%
! TTCTCAGGTATGAAAGCACA+TGG + chr7_1:71348541-71348560 None:intergenic 40.0%
ACAGTTAATCTCGGATTCTC+AGG + chr7_1:71348556-71348575 None:intergenic 40.0%
! GTCAATTTGGAGTCCCTATA+TGG + chr7_1:71348637-71348656 None:intergenic 40.0%
! CTGAAGCACTCTAGTCAATT+TGG + chr7_1:71348650-71348669 None:intergenic 40.0%
! TTCACTGCTACTTGATGAAG+GGG + chr7_1:71348851-71348870 None:intergenic 40.0%
! CTTCACTGCTACTTGATGAA+GGG + chr7_1:71348852-71348871 None:intergenic 40.0%
! TCTTCACTGCTACTTGATGA+AGG + chr7_1:71348853-71348872 None:intergenic 40.0%
! TACATTGAAGTTTGCTCACC+GGG - chr7_1:71348882-71348901 Msa1035540:intron 40.0%
AATACAGGCAGCACAAAACA+AGG - chr7_1:71348918-71348937 Msa1035540:CDS 40.0%
GACTAAACACCATGGAAACA+AGG + chr7_1:71349571-71349590 None:intergenic 40.0%
TTCGATATGGCATCAGAATC+TGG - chr7_1:71349689-71349708 Msa1035540:intron 40.0%
TATGGCATCAGAATCTGGAT+CGG - chr7_1:71349694-71349713 Msa1035540:intron 40.0%
! AACTTTAGGGAATTCAGCAG+CGG + chr7_1:71349747-71349766 None:intergenic 40.0%
GCTATGAGCCCAAAACTTTA+GGG + chr7_1:71349760-71349779 None:intergenic 40.0%
AAGAACCAAACATGGACAAG+AGG + chr7_1:71349787-71349806 None:intergenic 40.0%
! GAGTACTTATCTAAGACAGG+AGG + chr7_1:71350001-71350020 None:intergenic 40.0%
!! GGAGAGTACTTATCTAAGAC+AGG + chr7_1:71350004-71350023 None:intergenic 40.0%
GCAAAATTGTCTTGAACCTG+GGG + chr7_1:71350037-71350056 None:intergenic 40.0%
GAGCAAAATTGTCTTGAACC+TGG + chr7_1:71350039-71350058 None:intergenic 40.0%
GCACCTTAACCTCCTTATAT+AGG - chr7_1:71350103-71350122 Msa1035540:CDS 40.0%
TGGCCTATATAAGGAGGTTA+AGG + chr7_1:71350109-71350128 None:intergenic 40.0%
GCTCTTATCCAATTCATTGC+TGG + chr7_1:71350129-71350148 None:intergenic 40.0%
GCAATGAATTGGATAAGAGC+AGG - chr7_1:71350129-71350148 Msa1035540:intron 40.0%
TCACCCAAGTTACAAGCTAA+TGG - chr7_1:71350200-71350219 Msa1035540:intron 40.0%
CACCCAAGTTACAAGCTAAT+GGG - chr7_1:71350201-71350220 Msa1035540:intron 40.0%
!! CACCCATTAGCTTGTAACTT+GGG + chr7_1:71350206-71350225 None:intergenic 40.0%
!! TCACCCATTAGCTTGTAACT+TGG + chr7_1:71350207-71350226 None:intergenic 40.0%
ATCTTGAAACTCAGCCATCA+AGG + chr7_1:71350261-71350280 None:intergenic 40.0%
TTCAAGATTCAGTTGTTGGG+GGG - chr7_1:71350273-71350292 Msa1035540:intron 40.0%
GCTTGTAAGGTTGTATCTTG+AGG + chr7_1:71350337-71350356 None:intergenic 40.0%
ACCTTACAAGCTTAAACCCT+TGG - chr7_1:71350346-71350365 Msa1035540:intron 40.0%
ACCAAGGGTTTAAGCTTGTA+AGG + chr7_1:71350350-71350369 None:intergenic 40.0%
TTCTCATTCAGCTTCACCAA+GGG + chr7_1:71350365-71350384 None:intergenic 40.0%
TTTCTCATTCAGCTTCACCA+AGG + chr7_1:71350366-71350385 None:intergenic 40.0%
GCAATTAGAAAGGGAACAGA+AGG + chr7_1:71350601-71350620 None:intergenic 40.0%
ACAGTTCAGCCAAAAGACAT+TGG - chr7_1:71350735-71350754 Msa1035540:CDS 40.0%
CAGTTCAGCCAAAAGACATT+GGG - chr7_1:71350736-71350755 Msa1035540:CDS 40.0%
AGTTCAGCCAAAAGACATTG+GGG - chr7_1:71350737-71350756 Msa1035540:CDS 40.0%
! TCATCTTCCCCAATGTCTTT+TGG + chr7_1:71350747-71350766 None:intergenic 40.0%
GTGCTCCTAAAACAAAAGGT+AGG - chr7_1:71350771-71350790 Msa1035540:CDS 40.0%
! CACTACAGTACTCCATTTTC+CGG + chr7_1:71350979-71350998 None:intergenic 40.0%
!!! TACAGTCCTCTCTTTTTTGG+TGG - chr7_1:71351276-71351295 Msa1035540:intron 40.0%
AGTGAAGTTGCAATCCAGAT+TGG - chr7_1:71351561-71351580 Msa1035540:intron 40.0%
GTCTTCTTCTTGTTCCAATC+TGG + chr7_1:71351578-71351597 None:intergenic 40.0%
ACGAGATTTCCTAATAAGCC+TGG - chr7_1:71351673-71351692 Msa1035540:CDS 40.0%
TCCAAAGGAATGTCTTCTAC+GGG + chr7_1:71351701-71351720 None:intergenic 40.0%
CTCCAAAGGAATGTCTTCTA+CGG + chr7_1:71351702-71351721 None:intergenic 40.0%
! ACATTCCTTTGGAGAAGAAG+AGG - chr7_1:71351708-71351727 Msa1035540:CDS 40.0%
AAACACCTCTTCTTCTCCAA+AGG + chr7_1:71351716-71351735 None:intergenic 40.0%
GACCTGTATGTTAATCTGGA+TGG - chr7_1:71351908-71351927 Msa1035540:CDS 40.0%
AGCTGATGATTCTCCAAAAG+AGG - chr7_1:71351943-71351962 Msa1035540:CDS 40.0%
!! ATTTTGATGCACTGTGTGCA+TGG - chr7_1:71352557-71352576 Msa1035540:intron 40.0%
TTTATCACTAGTGCCTGTCA+AGG + chr7_1:71352705-71352724 None:intergenic 40.0%
TCGGATATATGATCAGCAGA+TGG + chr7_1:71352830-71352849 None:intergenic 40.0%
ATCTTTATCGTCTCTTGCGT+CGG + chr7_1:71352849-71352868 None:intergenic 40.0%
TATGCACTGAACTACACTTG+AGG + chr7_1:71353131-71353150 None:intergenic 40.0%
TGGACACTGAGAAACTTCTA+TGG + chr7_1:71353169-71353188 None:intergenic 40.0%
! GAGCAGCACAAGATTTTATC+CGG - chr7_1:71353522-71353541 Msa1035540:intron 40.0%
TTCATTAAAGAGGCTGTCTG+AGG - chr7_1:71353566-71353585 Msa1035540:intron 40.0%
!! AGATCAATCAGGAGTATCAC+AGG - chr7_1:71353833-71353852 Msa1035540:intron 40.0%
ATATTGGGCTCATCAGAGAA+TGG + chr7_1:71354330-71354349 None:intergenic 40.0%
! AAGAAGCAACTGTTTCTTGC+AGG + chr7_1:71354525-71354544 None:intergenic 40.0%
AAGTTCACCATGATAGTCCT+TGG + chr7_1:71354626-71354645 None:intergenic 40.0%
GGTGAACTTTACCTTGACAA+AGG - chr7_1:71354637-71354656 Msa1035540:intron 40.0%
TGTCCATGTTTCCTTTGTCA+AGG + chr7_1:71354651-71354670 None:intergenic 40.0%
AACATGGACAGTACCAATGA+AGG - chr7_1:71354661-71354680 Msa1035540:intron 40.0%
ACATGGACAGTACCAATGAA+GGG - chr7_1:71354662-71354681 Msa1035540:intron 40.0%
TTGCTTGAGATTCCCTTCAT+TGG + chr7_1:71354677-71354696 None:intergenic 40.0%
!! TAAAGAGCACCCAATGAAGA+TGG + chr7_1:71354727-71354746 None:intergenic 40.0%
! CTCTTCTAGAGATGAAACGA+AGG + chr7_1:71354759-71354778 None:intergenic 40.0%
! TCGTTTCATCTCTAGAAGAG+TGG - chr7_1:71354759-71354778 Msa1035540:intron 40.0%
TCATTCTTAAGGGGAATTGC+TGG + chr7_1:71354806-71354825 None:intergenic 40.0%
ATTATTACGGTGCAAGTGCT+AGG - chr7_1:71354881-71354900 Msa1035540:intron 40.0%
!! CTTATTTTCAAAGTGGTGGG+AGG + chr7_1:71354959-71354978 None:intergenic 40.0%
AACCCATTATTTAGTGGGAC+TGG - chr7_1:71354999-71355018 Msa1035540:intron 40.0%
TGCCAGTCCCACTAAATAAT+GGG + chr7_1:71355004-71355023 None:intergenic 40.0%
ATGCCAGTCCCACTAAATAA+TGG + chr7_1:71355005-71355024 None:intergenic 40.0%
GAAAGACTGTTACTCCTCTT+TGG - chr7_1:71355069-71355088 Msa1035540:intron 40.0%
!! TGGGAGCACTTATTATGAGA+GGG - chr7_1:71355111-71355130 Msa1035540:intron 40.0%
CACTTATTATGAGAGGGACA+AGG - chr7_1:71355117-71355136 Msa1035540:intron 40.0%
TTATTATGAGAGGGACAAGG+AGG - chr7_1:71355120-71355139 Msa1035540:intron 40.0%
AAAACGAGCACTAGATCAGT+GGG + chr7_1:71355580-71355599 None:intergenic 40.0%
TAAAACGAGCACTAGATCAG+TGG + chr7_1:71355581-71355600 None:intergenic 40.0%
GGAAGAACTAACAGCATCAA+AGG - chr7_1:71355638-71355657 Msa1035540:intron 40.0%
TCTGATTCCTAACTTCAAGC+TGG + chr7_1:71355665-71355684 None:intergenic 40.0%
ACTAGTGGAACAGCTCAAAA+TGG - chr7_1:71355840-71355859 Msa1035540:intron 40.0%
CTAGTGGAACAGCTCAAAAT+GGG - chr7_1:71355841-71355860 Msa1035540:intron 40.0%
AAGTTCCAGGTCTTTACTCA+AGG + chr7_1:71355940-71355959 None:intergenic 40.0%
CAGCTTCATATGAAAGTTCC+AGG + chr7_1:71355953-71355972 None:intergenic 40.0%
CGAGCTTCAAAGAAAGATTG+AGG - chr7_1:71356001-71356020 Msa1035540:intron 40.0%
AAAACGAACTTGCCAACATG+TGG - chr7_1:71356051-71356070 Msa1035540:intron 40.0%
AAACGAACTTGCCAACATGT+GGG - chr7_1:71356052-71356071 Msa1035540:intron 40.0%
GAGCAGAAAACGATGTTTCA+GGG - chr7_1:71356105-71356124 Msa1035540:intron 40.0%
! TTTAAAGTAGGAGTGGCTTG+AGG - chr7_1:71356213-71356232 Msa1035540:intron 40.0%
TTAAAGTAGGAGTGGCTTGA+GGG - chr7_1:71356214-71356233 Msa1035540:intron 40.0%
GCTTTGTAAAGACTGTTAGC+AGG - chr7_1:71356240-71356259 Msa1035540:intron 40.0%
! CAAAAAGGATGGTGATGAAG+GGG + chr7_1:71356284-71356303 None:intergenic 40.0%
! CCAAAAAGGATGGTGATGAA+GGG + chr7_1:71356285-71356304 None:intergenic 40.0%
! ACCAAAAAGGATGGTGATGA+AGG + chr7_1:71356286-71356305 None:intergenic 40.0%
TAGCTATGGACCAAAAAGGA+TGG + chr7_1:71356295-71356314 None:intergenic 40.0%
!! ATCCTTTTTGGTCCATAGCT+AGG - chr7_1:71356294-71356313 Msa1035540:intron 40.0%
!! TCCTTTTTGGTCCATAGCTA+GGG - chr7_1:71356295-71356314 Msa1035540:intron 40.0%
CAAATAAGAAGCCCTAGCTA+TGG + chr7_1:71356309-71356328 None:intergenic 40.0%
AAAAAAGAAGGCTGGGGAAA+AGG + chr7_1:71356359-71356378 None:intergenic 40.0%
! TTTTTCTTCGTTCCTCCGAA+TGG - chr7_1:71356376-71356395 Msa1035540:intron 40.0%
AGAGCTACCTTTCTCTGCAT+TGG - chr7_1:71347113-71347132 Msa1035540:three_prime_UTR 45.0%
TGCGTTTCCAATGCAGAGAA+AGG + chr7_1:71347123-71347142 None:intergenic 45.0%
ACAAAGCTGGATTCGATCTC+AGG + chr7_1:71347692-71347711 None:intergenic 45.0%
CCCTATGAGACCTAAATGAG+CGG + chr7_1:71347751-71347770 None:intergenic 45.0%
CCGCTCATTTAGGTCTCATA+GGG - chr7_1:71347748-71347767 Msa1035540:CDS 45.0%
GTTCACACATTAGAGAAGGC+TGG - chr7_1:71347844-71347863 Msa1035540:CDS 45.0%
TCATCATGTTGGAAAGTGGC+AGG - chr7_1:71347972-71347991 Msa1035540:CDS 45.0%
CATCATGTTGGAAAGTGGCA+GGG - chr7_1:71347973-71347992 Msa1035540:CDS 45.0%
ATCATGTTGGAAAGTGGCAG+GGG - chr7_1:71347974-71347993 Msa1035540:CDS 45.0%
CAAGAGTCCTTTGGACTTGA+AGG + chr7_1:71348281-71348300 None:intergenic 45.0%
CAAAGGACTCTTGCATGAGA+GGG - chr7_1:71348288-71348307 Msa1035540:intron 45.0%
GTCATGGACGTGTATCTGTA+AGG - chr7_1:71348683-71348702 Msa1035540:intron 45.0%
ACTATGGCATGATGCACGAA+TGG - chr7_1:71349331-71349350 Msa1035540:intron 45.0%
AGGGACAGGATAGGTTTCAA+AGG + chr7_1:71349721-71349740 None:intergenic 45.0%
GGCTATGAGCCCAAAACTTT+AGG + chr7_1:71349761-71349780 None:intergenic 45.0%
ACATCAAAGAAGAGGCAGTG+TGG + chr7_1:71349845-71349864 None:intergenic 45.0%
ATAGACTCAGGTGTGGAAGA+AGG + chr7_1:71349959-71349978 None:intergenic 45.0%
GATCAAGATAGACTCAGGTG+TGG + chr7_1:71349966-71349985 None:intergenic 45.0%
! TTATCTAAGACAGGAGGGAG+GGG + chr7_1:71349995-71350014 None:intergenic 45.0%
! CTTATCTAAGACAGGAGGGA+GGG + chr7_1:71349996-71350015 None:intergenic 45.0%
! ACTTATCTAAGACAGGAGGG+AGG + chr7_1:71349997-71350016 None:intergenic 45.0%
! CATTGCTGGCCTATATAAGG+AGG + chr7_1:71350115-71350134 None:intergenic 45.0%
TTGGATAAGAGCAGGCCAAA+TGG - chr7_1:71350137-71350156 Msa1035540:intron 45.0%
AACCAAGCAGTTGGTCCATT+TGG + chr7_1:71350155-71350174 None:intergenic 45.0%
ATGGACCAACTGCTTGGTTA+TGG - chr7_1:71350156-71350175 Msa1035540:intron 45.0%
TGAAGCCATAACCAAGCAGT+TGG + chr7_1:71350164-71350183 None:intergenic 45.0%
! AGGTAGCACTAGCCTATCTT+TGG + chr7_1:71350241-71350260 None:intergenic 45.0%
ATAGGCTAGTGCTACCTTGA+TGG - chr7_1:71350244-71350263 Msa1035540:intron 45.0%
AGTTGTTGGGGGGAAATAGA+GGG - chr7_1:71350283-71350302 Msa1035540:intron 45.0%
AGACGCAGAAACTGAATCTG+GGG + chr7_1:71350463-71350482 None:intergenic 45.0%
GAGACGCAGAAACTGAATCT+GGG + chr7_1:71350464-71350483 None:intergenic 45.0%
TAGAAAGGGAACAGAAGGGA+TGG + chr7_1:71350596-71350615 None:intergenic 45.0%
TTTCTATGCCCTCCGGAAAA+TGG - chr7_1:71350964-71350983 Msa1035540:intron 45.0%
! ACAGTACTCCATTTTCCGGA+GGG + chr7_1:71350975-71350994 None:intergenic 45.0%
! TACAGTACTCCATTTTCCGG+AGG + chr7_1:71350976-71350995 None:intergenic 45.0%
!!! AGTCCTCTCTTTTTTGGTGG+CGG - chr7_1:71351279-71351298 Msa1035540:intron 45.0%
ATTCCGCCACCAAAAAAGAG+AGG + chr7_1:71351285-71351304 None:intergenic 45.0%
! GACGCTAAAGCTGCTTTGTT+AGG - chr7_1:71351595-71351614 Msa1035540:CDS 45.0%
!! CGTTGACTGTGATGCTTTTG+TGG + chr7_1:71351656-71351675 None:intergenic 45.0%
CCAAAGGAATGTCTTCTACG+GGG + chr7_1:71351700-71351719 None:intergenic 45.0%
AGTTCCTGGTATTTGGGAGT+GGG + chr7_1:71351762-71351781 None:intergenic 45.0%
AAGTTCCTGGTATTTGGGAG+TGG + chr7_1:71351763-71351782 None:intergenic 45.0%
ATGGGACATGCATTTGTCAC+TGG - chr7_1:71352479-71352498 Msa1035540:intron 45.0%
GGCACTAGTGATAAATCCAG+TGG - chr7_1:71352710-71352729 Msa1035540:intron 45.0%
TTGTCTGCTTGAGGTGTAGA+CGG + chr7_1:71352755-71352774 None:intergenic 45.0%
TCTACACCTCAAGCAGACAA+TGG - chr7_1:71352755-71352774 Msa1035540:intron 45.0%
ATTGGGACAAGAGACACCTT+TGG - chr7_1:71352886-71352905 Msa1035540:CDS 45.0%
! GCACAAGATTTTATCCGGAG+AGG - chr7_1:71353527-71353546 Msa1035540:intron 45.0%
! CAAGATTTTATCCGGAGAGG+TGG - chr7_1:71353530-71353549 Msa1035540:intron 45.0%
TCAGAGCAGACAGATCAATC+AGG - chr7_1:71353822-71353841 Msa1035540:intron 45.0%
CATTAGACAGGAAGTCCAGA+TGG - chr7_1:71354020-71354039 Msa1035540:intron 45.0%
GTTACTAGCGCATGAACATG+CGG - chr7_1:71354292-71354311 Msa1035540:intron 45.0%
ACAACATTTCCCTGGAACCA+AGG - chr7_1:71354606-71354625 Msa1035540:intron 45.0%
CATGATAGTCCTTGGTTCCA+GGG + chr7_1:71354618-71354637 None:intergenic 45.0%
ACCTTGTGGCCATCTTCATT+GGG - chr7_1:71354715-71354734 Msa1035540:CDS 45.0%
CTAGAGATGAAACGAAGGCT+AGG + chr7_1:71354754-71354773 None:intergenic 45.0%
!! GTGGGAGCACTTATTATGAG+AGG - chr7_1:71355110-71355129 Msa1035540:intron 45.0%
GATAGAAGAGCTGAAGCAGA+AGG - chr7_1:71355614-71355633 Msa1035540:intron 45.0%
CAAAGGACCAGCTTGAAGTT+AGG - chr7_1:71355655-71355674 Msa1035540:intron 45.0%
ATTCTTGGAAGCAGCTAGCT+CGG + chr7_1:71355802-71355821 None:intergenic 45.0%
!! TGTTCCACTAGTTCTACGTG+GGG + chr7_1:71355832-71355851 None:intergenic 45.0%
!! CTGTTCCACTAGTTCTACGT+GGG + chr7_1:71355833-71355852 None:intergenic 45.0%
!! ACTAGCCTTGAGTAAAGACC+TGG - chr7_1:71355932-71355951 Msa1035540:intron 45.0%
! TGTTGGCAAGTTCGTTTTCC+AGG + chr7_1:71356049-71356068 None:intergenic 45.0%
GGAGCAGAAAACGATGTTTC+AGG - chr7_1:71356104-71356123 Msa1035540:intron 45.0%
! CCCTTCATCACCATCCTTTT+TGG - chr7_1:71356282-71356301 Msa1035540:intron 45.0%
GAAGCGGAAAGTGAGTTCTT+TGG + chr7_1:71356337-71356356 None:intergenic 45.0%
GGACCAATTAGCACACCATT+CGG + chr7_1:71356394-71356413 None:intergenic 45.0%
TGGCATGAGAATAGGAAGGG+AGG - chr7_1:71347272-71347291 Msa1035540:three_prime_UTR 50.0%
GGAGAGTTAGCCGCTCATTT+AGG - chr7_1:71347738-71347757 Msa1035540:CDS 50.0%
GCCGCTCATTTAGGTCTCAT+AGG - chr7_1:71347747-71347766 Msa1035540:CDS 50.0%
GACTTGAAGGGTGGATGCAT+AGG + chr7_1:71348268-71348287 None:intergenic 50.0%
CATCCACCCTTCAAGTCCAA+AGG - chr7_1:71348271-71348290 Msa1035540:intron 50.0%
AGTCCTTTGGACTTGAAGGG+TGG + chr7_1:71348277-71348296 None:intergenic 50.0%
CCTCTCATGCAAGAGTCCTT+TGG + chr7_1:71348290-71348309 None:intergenic 50.0%
CCAAAGGACTCTTGCATGAG+AGG - chr7_1:71348287-71348306 Msa1035540:intron 50.0%
!! TGACAAGTAGGGGTACCAAG+TGG - chr7_1:71348414-71348433 Msa1035540:intron 50.0%
GTGCTTCAGTCTTCTCTCAG+TGG - chr7_1:71348661-71348680 Msa1035540:intron 50.0%
CAGTCTTCTCTCAGTGGTCA+TGG - chr7_1:71348667-71348686 Msa1035540:intron 50.0%
TGGCACAGAGTACAAAGTCC+AGG - chr7_1:71349007-71349026 Msa1035540:CDS 50.0%
GGGAATTCAGCAGCGGAATA+GGG + chr7_1:71349740-71349759 None:intergenic 50.0%
AGGGAATTCAGCAGCGGAAT+AGG + chr7_1:71349741-71349760 None:intergenic 50.0%
CCAAACATGGACAAGAGGAG+AGG + chr7_1:71349782-71349801 None:intergenic 50.0%
CCTCTCCTCTTGTCCATGTT+TGG - chr7_1:71349779-71349798 Msa1035540:CDS 50.0%
!! TCTTGAACCTGGGGTATTGC+TGG + chr7_1:71350028-71350047 None:intergenic 50.0%
CAGTTGTTGGGGGGAAATAG+AGG - chr7_1:71350282-71350301 Msa1035540:intron 50.0%
CGAGACGCAGAAACTGAATC+TGG + chr7_1:71350465-71350484 None:intergenic 50.0%
!! GTCCACTTTTCTATGCCCTC+CGG - chr7_1:71350957-71350976 Msa1035540:intron 50.0%
! TTCCGGAGGGCATAGAAAAG+TGG + chr7_1:71350962-71350981 None:intergenic 50.0%
CCCCGTAGAAGACATTCCTT+TGG - chr7_1:71351697-71351716 Msa1035540:CDS 50.0%
TGATGCACTGTGTGCATGGT+TGG - chr7_1:71352561-71352580 Msa1035540:intron 50.0%
GATGCACTGTGTGCATGGTT+GGG - chr7_1:71352562-71352581 Msa1035540:intron 50.0%
!! AAACGGGAAAGTGCCTTGAC+AGG - chr7_1:71352689-71352708 Msa1035540:intron 50.0%
! GCTGGTAGATTTTGCTCCAC+TGG + chr7_1:71352729-71352748 None:intergenic 50.0%
GGCTAGAGAATGGGAAAGTC+TGG + chr7_1:71352795-71352814 None:intergenic 50.0%
GCTTTCTGCGGCTAGAGAAT+GGG + chr7_1:71352804-71352823 None:intergenic 50.0%
AGCTTTCTGCGGCTAGAGAA+TGG + chr7_1:71352805-71352824 None:intergenic 50.0%
AGCAGATGGAGAGCTTTCTG+CGG + chr7_1:71352816-71352835 None:intergenic 50.0%
! TGAATGAAGTGCCACCTCTC+CGG + chr7_1:71353544-71353563 None:intergenic 50.0%
ATGAACATGCGGCCTTGCTA+CGG - chr7_1:71354303-71354322 Msa1035540:intron 50.0%
TCAGAGAATGGTCCGTAGCA+AGG + chr7_1:71354318-71354337 None:intergenic 50.0%
CCATGATAGTCCTTGGTTCC+AGG + chr7_1:71354619-71354638 None:intergenic 50.0%
CCTGGAACCAAGGACTATCA+TGG - chr7_1:71354616-71354635 Msa1035540:intron 50.0%
AGGGAATCTCAAGCAAGCAC+AGG - chr7_1:71354681-71354700 Msa1035540:CDS 50.0%
CACCTTGTGGCCATCTTCAT+TGG - chr7_1:71354714-71354733 Msa1035540:CDS 50.0%
ACCCAATGAAGATGGCCACA+AGG + chr7_1:71354719-71354738 None:intergenic 50.0%
AGAAGAGCTGAAGCAGAAGG+TGG - chr7_1:71355617-71355636 Msa1035540:intron 50.0%
AGCTGCTGCTGTTGAGCTTA+AGG - chr7_1:71355725-71355744 Msa1035540:intron 50.0%
ACGTGGGGTAGGTGAATTCT+TGG + chr7_1:71355817-71355836 None:intergenic 50.0%
!! GCTGTTCCACTAGTTCTACG+TGG + chr7_1:71355834-71355853 None:intergenic 50.0%
TGCCAACATGTGGGTTCTTG+TGG - chr7_1:71356061-71356080 Msa1035540:intron 50.0%
TGCCACAAGAACCCACATGT+TGG + chr7_1:71356066-71356085 None:intergenic 50.0%
GCCCTAGCTATGGACCAAAA+AGG + chr7_1:71356299-71356318 None:intergenic 50.0%
CCAATTAGCACACCATTCGG+AGG + chr7_1:71356391-71356410 None:intergenic 50.0%
CCTCCGAATGGTGTGCTAAT+TGG - chr7_1:71356388-71356407 Msa1035540:intron 50.0%
GGATGCTGCATGCACAAAGC+TGG + chr7_1:71347705-71347724 None:intergenic 55.0%
TAACTGCCGAGGGGGCAAAA+AGG + chr7_1:71347887-71347906 None:intergenic 55.0%
CAGCGGAATAGGGACAGGAT+AGG + chr7_1:71349730-71349749 None:intergenic 55.0%
TTCAGCAGCGGAATAGGGAC+AGG + chr7_1:71349735-71349754 None:intergenic 55.0%
!! TGAACCTGGGGTATTGCTGG+TGG + chr7_1:71350025-71350044 None:intergenic 55.0%
GGCCAAATGGACCAACTGCT+TGG - chr7_1:71350150-71350169 Msa1035540:intron 55.0%
TGTTGGGGGGAAATAGAGGG+AGG - chr7_1:71350286-71350305 Msa1035540:intron 55.0%
CTACGGGGACCAGGCTTATT+AGG + chr7_1:71351685-71351704 None:intergenic 55.0%
GAATGTCTTCTACGGGGACC+AGG + chr7_1:71351694-71351713 None:intergenic 55.0%
CTGGTATTTGGGAGTGGGTG+GGG + chr7_1:71351757-71351776 None:intergenic 55.0%
CCTGGTATTTGGGAGTGGGT+GGG + chr7_1:71351758-71351777 None:intergenic 55.0%
TCCTGGTATTTGGGAGTGGG+TGG + chr7_1:71351759-71351778 None:intergenic 55.0%
TTGAGGTGTAGACGGTGTGC+TGG + chr7_1:71352747-71352766 None:intergenic 55.0%
! TCTTGTGCTGCTCCCTCAGA+AGG + chr7_1:71353515-71353534 None:intergenic 55.0%
TCAGGCTGTTGCTGAGCTGA+TGG - chr7_1:71353920-71353939 Msa1035540:intron 55.0%
GGTGCAAGTGCTAGGAACAC+TGG - chr7_1:71354889-71354908 Msa1035540:intron 55.0%
!! CCACTAGTTCTACGTGGGGT+AGG + chr7_1:71355828-71355847 None:intergenic 55.0%
CCTACCCCACGTAGAACTAG+TGG - chr7_1:71355825-71355844 Msa1035540:intron 55.0%
GAAGGCTGGGGAAAAGGAAG+CGG + chr7_1:71356353-71356372 None:intergenic 55.0%
TCGGCAGTTAACTGCCGAGG+GGG + chr7_1:71347897-71347916 None:intergenic 60.0%
CTCGGCAGTTAACTGCCGAG+GGG + chr7_1:71347896-71347915 None:intergenic 60.0%
CCTCGGCAGTTAACTGCCGA+GGG + chr7_1:71347895-71347914 None:intergenic 60.0%
TCCTCGGCAGTTAACTGCCG+AGG + chr7_1:71347898-71347917 None:intergenic 60.0%
AGTGGCAGGGGACGTGATTC+TGG - chr7_1:71347986-71348005 Msa1035540:intron 60.0%
GCAGGGGACGTGATTCTGGA+AGG - chr7_1:71347990-71348009 Msa1035540:intron 60.0%
CTCTCCACCAGCAATACCCC+AGG - chr7_1:71350018-71350037 Msa1035540:CDS 60.0%
CCCACCCACTCCCAAATACC+AGG - chr7_1:71351755-71351774 Msa1035540:intron 60.0%
CCCTCGGCAGTTAACTGCCG+AGG - chr7_1:71347894-71347913 Msa1035540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 71347083 71356523 71347083 ID=Msa1035540;Name=Msa1035540
chr7_1 mRNA 71347083 71356523 71347083 ID=Msa1035540-mRNA-1;Parent=Msa1035540;Name=Msa1035540-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.33|0.23|0.92|0.83|0.84|13|354|680
chr7_1 exon 71347083 71348000 71347083 ID=Msa1035540-mRNA-1:exon:17247;Parent=Msa1035540-mRNA-1
chr7_1 exon 71348904 71349101 71348904 ID=Msa1035540-mRNA-1:exon:17246;Parent=Msa1035540-mRNA-1
chr7_1 exon 71349180 71349227 71349180 ID=Msa1035540-mRNA-1:exon:17245;Parent=Msa1035540-mRNA-1
chr7_1 exon 71349632 71349682 71349632 ID=Msa1035540-mRNA-1:exon:17244;Parent=Msa1035540-mRNA-1
chr7_1 exon 71349752 71349874 71349752 ID=Msa1035540-mRNA-1:exon:17243;Parent=Msa1035540-mRNA-1
chr7_1 exon 71349983 71350123 71349983 ID=Msa1035540-mRNA-1:exon:17242;Parent=Msa1035540-mRNA-1
chr7_1 exon 71350699 71350917 71350699 ID=Msa1035540-mRNA-1:exon:17241;Parent=Msa1035540-mRNA-1
chr7_1 exon 71351594 71351752 71351594 ID=Msa1035540-mRNA-1:exon:17240;Parent=Msa1035540-mRNA-1
chr7_1 exon 71351877 71352059 71351877 ID=Msa1035540-mRNA-1:exon:17239;Parent=Msa1035540-mRNA-1
chr7_1 exon 71352818 71352961 71352818 ID=Msa1035540-mRNA-1:exon:17238;Parent=Msa1035540-mRNA-1
chr7_1 exon 71354667 71354774 71354667 ID=Msa1035540-mRNA-1:exon:17237;Parent=Msa1035540-mRNA-1
chr7_1 exon 71354913 71355011 71354913 ID=Msa1035540-mRNA-1:exon:17236;Parent=Msa1035540-mRNA-1
chr7_1 exon 71356518 71356523 71356518 ID=Msa1035540-mRNA-1:exon:17235;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71356518 71356523 71356518 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71354913 71355011 71354913 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71354667 71354774 71354667 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71352818 71352961 71352818 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71351877 71352059 71351877 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71351594 71351752 71351594 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71350699 71350917 71350699 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71349983 71350123 71349983 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71349752 71349874 71349752 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71349632 71349682 71349632 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71349180 71349227 71349180 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71348904 71349101 71348904 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 CDS 71347437 71348000 71347437 ID=Msa1035540-mRNA-1:cds;Parent=Msa1035540-mRNA-1
chr7_1 three_prime_UTR 71347083 71347436 71347083 ID=Msa1035540-mRNA-1:three_prime_utr;Parent=Msa1035540-mRNA-1
Gene Sequence

>Msa1035540

ATGCATGTTATTTCAAAATTGACCGAAGCTAAAGCTAGTCACATTCCATATAGGGACTCCAAATTGACTAGAGTGCTTCAGTCTTCTCTCAGTGGTCATGGACGTCTCATTTGTACAGTAACCCCTTCATCAAGTAGCAGTGAAGAGACACATAATACATTGAAGTTTGCTCACCGGGCAAAGCATATTGAAATACAGGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAATTGGAACAATTAAAGAGGGGCATTGTCACAGTTCAGCCAAAAGACATTGGGGAAGATGACATTGTGCTCCTAAAACAAAAGTTAGAAGATGGTCAAGTGAAGTTGCAATCCAGATTGGAACAAGAAGAAGACGCTAAAGCTGCTTTGTTAGGCAGAATTCAACGGTTGACTAAGTTGATTTTGGTCTCCACAAAAGCATCACAGTCAACGAGATTTCCTAATAAGCCTGGTCCCCGTAGAAGACATTCCTTTGGAGAAGAAGAGCTGGCATATCTTCCATACAAAAGGCGGGATTTAATTTTAGAAGAGGAAAATATTGACCTGTATGTTAATCTGGATGGAAATGCTGCAACAGCTGATGATTCTCCAAAAGAGGAGAAGAAGACAAAGAAACATGGGCTACTAAATTGGTTGAAATCACGTAAACGGGAAAGTGCCTTGACAGGCACTAGTGATAAATCCAGTGGAGCAAAATCTACCAGCACACCGTCTACACCTCAAGCAGACAATGGTAACCATGTGGAGTCCAGACTTTCCCATTCTCTAGCCGCAGAAAGCTCTCCATCTGCTGATCATATATCCGACGCAAGAGACGATAAAGATATTCACGAGGATAGTTTATTGGGACAAGAGACACCTTTGACAAGCATCAAATCCGTTGATCAAATTGACCTTCTGAGGGAGCAGCACAAGATTTTATCCGGAGAGGTGGCACTTCATTCAAGTTCATTAAAGAGGCTGTCTGAGGAAACAAGAACAAATCCTCAAAATAATCAGATTCATGTGGAGATGAAAAGGTTGAAAGATGAAATTAAGGAAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATGTCTAATTATTTCATAGCTTCAGAGCAGACAGATCAATCAGGAGTATCACAGGCTGTTGCTGAGCTGATGGAACAATTAAATGATAAATCCTTTGAACTTGAGGTCAAAGCAGCAGACAACCGTATAATTCAAGAACAGCTTAATCAGAAGATTTGTGAATGCGAAAGCCTGCAAGAAACAGTTGCTTCTTTGAAACAGCAACTTACAGATGCAATAGAGTTGAGGAATTTCAGCCCTGTAGTCAATCATTCACAACATTTCCCTGGAACCAAGGACTATCATGGTGAACTTTACCTTGACAAAGGAAACATGGACAGTACCAATGAAGGGAATCTCAAGCAAGCACAGGCAAGTGAGATAGAAGAGCTGAAGCAGAAGGTGGAAGAACTAACAGCATCAAAGGACCAGCTTGAAGTTAGGAATCAGAAACTAGCTGAAGAGAGTTCATATGCTAAAGGGCTAGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAACTCATGAACCATAATGAGAGATTATCTACCGAGCTAGCTGCTTCCAAGAATTCACCTACCCCACGTAGAACTAGTGGAACAGCTCAAAATGGGAGAAGAGAAAGTCAAGTTAGACTTAGACGAAATGATCAGGGTGTTTCAAACTCTGATGTCAAGAGAGAACTAGCCTTGAGTAAAGACCTGGAACTTTCATATGAAGCTGCTCTCTTAGAAAGAGATCAGAAAGAGGTCGAGCTTCAAAGAAAGATTGAGGAGTCAAAACAAAGAGAAGCATACCTGGAAAACGAACTTGCCAACATGTGGGTTCTTGTGGCAAAGCTTAAAAAGTCACAAGGAGCAGAAAACGATGTTTCAGGGTCGACTAAAGAGAATTTGCAATTTGATGGTTTTGATATTTGA
Protein sequence

>Msa1035540

MHVISKLTEAKASHIPYRDSKLTRVLQSSLSGHGRLICTVTPSSSSSEETHNTLKFAHRAKHIEIQAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDIGEDDIVLLKQKLEDGQVKLQSRLEQEEDAKAALLGRIQRLTKLILVSTKASQSTRFPNKPGPRRRHSFGEEELAYLPYKRRDLILEEENIDLYVNLDGNAATADDSPKEEKKTKKHGLLNWLKSRKRESALTGTSDKSSGAKSTSTPSTPQADNGNHVESRLSHSLAAESSPSADHISDARDDKDIHEDSLLGQETPLTSIKSVDQIDLLREQHKILSGEVALHSSSLKRLSEETRTNPQNNQIHVEMKRLKDEIKEKSEQIDLLEKQMSNYFIASEQTDQSGVSQAVAELMEQLNDKSFELEVKAADNRIIQEQLNQKICECESLQETVASLKQQLTDAIELRNFSPVVNHSQHFPGTKDYHGELYLDKGNMDSTNEGNLKQAQASEIEELKQKVEELTASKDQLEVRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNERLSTELAASKNSPTPRRTSGTAQNGRRESQVRLRRNDQGVSNSDVKRELALSKDLELSYEAALLERDQKEVELQRKIEESKQREAYLENELANMWVLVAKLKKSQGAENDVSGSTKENLQFDGFDI*