AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0767300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0767300 MtrunA17_Chr3g0097731 60.825 97 36 1 613 707 2 98 2.36e-32 120
Msa0767300 MtrunA17_Chr3g0097741 46.243 173 58 7 333 483 1102 1261 7.99e-31 130
Msa0767300 MtrunA17_Chr7g0242041 57.692 78 31 1 632 707 147 224 2.70e-19 87.4
Msa0767300 MtrunA17_Chr2g0309021 25.385 260 140 10 411 632 183 426 4.14e-12 69.3
Msa0767300 MtrunA17_Chr4g0011741 22.442 303 182 8 367 634 525 809 9.20e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0767300 AT1G40087.1 26.480 321 165 12 413 689 56 349 4.57e-14 75.1

Find 173 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTATATTGTAGTTATTT+TGG 0.133678 5_2:+30301298 None:intergenic
CGTACAGATCCTTTCCTTTC+AGG 0.145611 5_2:+30297848 None:intergenic
TTGTTCAATGTTAAGTTTAT+TGG 0.146291 5_2:-30297041 Msa0767300:three_prime_UTR
CTGATTGTGATTGGCCATTT+TGG 0.150250 5_2:+30301136 None:intergenic
CTGATTGTGATTCATGATTT+TGG 0.191362 5_2:+30301651 None:intergenic
CTGATTGGGATTCATGATTT+TGG 0.192482 5_2:+30302330 None:intergenic
GAAGATCTAATGTTGAAAAT+AGG 0.200930 5_2:-30297784 Msa0767300:CDS
CTCATTCTACTAACAGAATT+AGG 0.227549 5_2:+30299410 None:intergenic
AGACTCAAGATTCTACAAAT+TGG 0.229852 5_2:-30297901 Msa0767300:CDS
ACTGAATTATACAAACAAAA+AGG 0.237231 5_2:+30296953 None:intergenic
GTTGGGCGGGGATGTCATTT+TGG 0.238572 5_2:+30304726 None:intergenic
CTGATTGTGGTACATCATTT+TGG 0.272342 5_2:+30302946 None:intergenic
GTTGAATATCCTATTTCTTA+TGG 0.272950 5_2:-30302897 Msa0767300:CDS
CATTTATATTGTGGTTGTTT+TGG 0.273564 5_2:+30300464 None:intergenic
GCTGAATATCCTATTTCTTT+TGG 0.275592 5_2:-30301602 Msa0767300:CDS
ATTTGTATGTCGGCCCTATT+TGG 0.281888 5_2:-30297083 Msa0767300:three_prime_UTR
AACAATTACTTGGGAAATCT+TGG 0.282477 5_2:+30297015 None:intergenic
GAAGGATCAACTCTTCTATC+AGG 0.283230 5_2:+30298793 None:intergenic
CTTGTATTTGCTGTTCTGAT+TGG 0.285073 5_2:+30302315 None:intergenic
ATGAGTAAAAGATTACTTAA+AGG 0.290210 5_2:-30301063 Msa0767300:intron
CCTTAGAGCTATCAATTAAT+TGG 0.301412 5_2:+30301328 None:intergenic
CCCATTCTACCATAAGAAAT+AGG 0.310503 5_2:+30302888 None:intergenic
CCTATTCTACCAAAAGAAAT+AGG 0.316688 5_2:+30301593 None:intergenic
AGATACAAGAGAGAATTTAA+TGG 0.329508 5_2:-30301690 Msa0767300:CDS
CGCATAAAGTTTAAAGCTGT+TGG 0.334017 5_2:-30301892 Msa0767300:CDS
ACCAAGTACTTCCTCCAAAT+AGG 0.334459 5_2:+30297069 None:intergenic
ATTTCATACCTCCAACAAAT+TGG 0.337165 5_2:+30300431 None:intergenic
TGTTTATACGATGGTCGTTT+TGG 0.343578 5_2:+30301812 None:intergenic
TTTGTTTGCTCGGTCAATTC+CGG 0.352047 5_2:+30298925 None:intergenic
GATACTTTAGGTAATCCTAT+AGG 0.357677 5_2:-30299200 Msa0767300:CDS
AAGATCTAATGTTGAAAATA+GGG 0.362744 5_2:-30297783 Msa0767300:CDS
TCCTATTTCTTATGGTAGAA+TGG 0.363183 5_2:-30302889 Msa0767300:CDS
AAGCCACCCTCATGTATATA+AGG 0.365967 5_2:+30296978 None:intergenic
TTAGGAGTACTTGGAGCATT+AGG 0.369290 5_2:+30297575 None:intergenic
TAGTATTTGCTTTGTTTGCT+CGG 0.376113 5_2:+30298915 None:intergenic
GAGTAAGTTTCACTTTGTTC+CGG 0.377803 5_2:-30298944 Msa0767300:CDS
GCAAGTCTTAACCACCAAAA+TGG 0.381151 5_2:-30301150 Msa0767300:CDS
CACAAATTAGAAAATTTGCT+TGG 0.382028 5_2:-30297758 Msa0767300:CDS
TTTGTTGCTCTGATTGTGAT+TGG 0.384046 5_2:+30299459 None:intergenic
CAACTACAAGTGACAGTGAT+TGG 0.384275 5_2:-30297529 Msa0767300:CDS
TTTCCAGCTTAGAATATTGA+TGG 0.384605 5_2:+30299115 None:intergenic
GAGATGTACCTTTCCCTCCT+TGG 0.385864 5_2:+30298738 None:intergenic
CCCTATTTGGAGGAAGTACT+TGG 0.386714 5_2:-30297070 Msa0767300:three_prime_UTR
GATTGGTCACTTTGGAGATT+AGG 0.387777 5_2:+30299476 None:intergenic
CCAATTAATTGATAGCTCTA+AGG 0.389326 5_2:-30301328 Msa0767300:CDS
GTGGAATCTCCTACTTCATT+TGG 0.390695 5_2:-30301090 Msa0767300:CDS
TTGTATTTGCTGTTCTGATT+GGG 0.391402 5_2:+30302316 None:intergenic
GTAAGGCCGCGACATACTTC+AGG 0.392594 5_2:-30304640 Msa0767300:intron
TTAGGTCAGAAGAGGGTAAG+AGG 0.399034 5_2:-30299284 Msa0767300:intron
AGGCACGAGAGAGAATTTAA+TGG 0.403747 5_2:-30302369 Msa0767300:CDS
GACTCAAGATTCTACAAATT+GGG 0.408913 5_2:-30297900 Msa0767300:CDS
CTGATTGTGATTGGTCACTT+TGG 0.411868 5_2:+30299468 None:intergenic
CACACTCTTCATTTATATTG+TGG 0.411989 5_2:+30300455 None:intergenic
GTACTTGTTCTGATTGTGAT+TGG 0.412588 5_2:+30301127 None:intergenic
AGTGAAAAGTGTGCACAATC+TGG 0.412679 5_2:-30301279 Msa0767300:CDS
GTACAGATCCTTTCCTTTCA+GGG 0.412708 5_2:+30297849 None:intergenic
GTTTCTAGTGACGGTTGGGC+GGG 0.415172 5_2:+30304713 None:intergenic
CCTATTTCTTATGGTAGAAT+GGG 0.418294 5_2:-30302888 Msa0767300:CDS
TGTGTTGAAGTGGATACTTT+AGG 0.418571 5_2:-30299212 Msa0767300:CDS
GAAGAGTTTGCACAATTTGA+AGG 0.421083 5_2:-30303092 Msa0767300:CDS
GATTCCACACATCCGACATT+CGG 0.422314 5_2:+30299255 None:intergenic
ACAAATTAGAAAATTTGCTT+GGG 0.426732 5_2:-30297757 Msa0767300:CDS
ATTCCACACATCCGACATTC+GGG 0.431245 5_2:+30299256 None:intergenic
CCAAGTACTTCCTCCAAATA+GGG 0.432631 5_2:+30297070 None:intergenic
TCCTAATGATTTCTCTAGTA+AGG 0.438496 5_2:-30297558 Msa0767300:CDS
ATCGTGCTTTAGTACATCAT+TGG 0.444149 5_2:-30298765 Msa0767300:CDS
GAAGAGTGTGACCAATTTGT+TGG 0.461216 5_2:-30300442 Msa0767300:CDS
TGTTAGACAACTGAGGCTAA+TGG 0.463813 5_2:-30298176 Msa0767300:intron
ATACTTTAGGTAATCCTATA+GGG 0.464522 5_2:-30299199 Msa0767300:CDS
CAATCACTGTCACTTGTAGT+TGG 0.466481 5_2:+30297530 None:intergenic
AAACAAGACCGAGGAAGAAA+TGG 0.468253 5_2:-30298827 Msa0767300:CDS
GGTTAAGACTTGCTACCATT+AGG 0.476060 5_2:+30301160 None:intergenic
AGATTAGGACTTGCTACCAC+TGG 0.479706 5_2:+30299491 None:intergenic
TAATATGTTTGAGTGGATAC+AGG 0.480571 5_2:-30299069 Msa0767300:intron
GAAAATTGATACTGCCATAC+TGG 0.481466 5_2:-30297506 Msa0767300:intron
TTTAAATGCACTGGGCTGCT+TGG 0.481978 5_2:-30299159 Msa0767300:CDS
CTATAGTTTACTCACCAGTA+TGG 0.483734 5_2:+30297492 None:intergenic
ATGCACTGGGCTGCTTGGTA+AGG 0.487077 5_2:-30299154 Msa0767300:CDS
CTCCCATCAATATTCTAAGC+TGG 0.489833 5_2:-30299118 Msa0767300:CDS
GCATAAAGTTTAAAGCTGTT+GGG 0.491168 5_2:-30301891 Msa0767300:CDS
GTAGGCAGCCATTTCTTCCT+CGG 0.492642 5_2:+30298819 None:intergenic
GAGAAATCATTAGGAGTACT+TGG 0.493266 5_2:+30297566 None:intergenic
TCCTTACTAGAGAAATCATT+AGG 0.497003 5_2:+30297557 None:intergenic
TTTAAAGCTGTTGGGAAAGG+TGG 0.498924 5_2:-30301883 Msa0767300:CDS
TTTCTAGTGACGGTTGGGCG+GGG 0.499287 5_2:+30304714 None:intergenic
AAAGGATCTGTACGTTGTCT+TGG 0.502221 5_2:-30297839 Msa0767300:CDS
AAACATGACTTGAAAGCAAA+GGG 0.504754 5_2:-30298859 Msa0767300:CDS
CGGTCTACACTTAATACTGA+TGG 0.508801 5_2:-30296929 Msa0767300:three_prime_UTR
ATGAGTAAAAGTTTAACTAA+AGG 0.511496 5_2:-30299392 Msa0767300:intron
AACTACAAGTGACAGTGATT+GGG 0.519314 5_2:-30297528 Msa0767300:CDS
AACTCTTCTATCAGGGATGT+AGG 0.523874 5_2:+30298801 None:intergenic
AGTACATCATTGGTGTTCCA+AGG 0.525050 5_2:-30298755 Msa0767300:CDS
ACACATATGAATTCTCCATC+TGG 0.526107 5_2:+30299230 None:intergenic
ATATTAGTTATGTTCAACTC+TGG 0.530902 5_2:+30299086 None:intergenic
GACGTATACTCAAGAGTAAG+AGG 0.531396 5_2:-30297872 Msa0767300:CDS
ATGGGTAAAAGTTTACCTAA+AGG 0.532217 5_2:-30302870 Msa0767300:intron
TGTATTTGCTGTTCTGATTG+TGG 0.532371 5_2:+30302933 None:intergenic
TCTTTATAGTATCTACAAGA+AGG 0.533092 5_2:-30301185 Msa0767300:intron
TTTGTTTGTATAATTCAGTA+CGG 0.533391 5_2:-30296949 Msa0767300:three_prime_UTR
ATCTGTACGTTGTCTTGGCA+AGG 0.533551 5_2:-30297834 Msa0767300:CDS
CTCATTCTACCAAATGAAGT+AGG 0.533963 5_2:+30301081 None:intergenic
ATCTACAAGAAGGAGCCTAA+TGG 0.534443 5_2:-30301175 Msa0767300:CDS
ATCACACTGAAAGCAAAGTA+AGG 0.537541 5_2:-30304657 Msa0767300:five_prime_UTR
AAACTTTATGCGCCTCCCTA+CGG 0.538836 5_2:+30301903 None:intergenic
AAGTTTAAAGCTGTTGGGAA+AGG 0.542861 5_2:-30301886 Msa0767300:CDS
ATACCAATGAGAGGAACAAA+AGG 0.544428 5_2:-30300558 Msa0767300:CDS
GAGACTCGTACTCGTAAAGA+TGG 0.546024 5_2:-30298122 Msa0767300:CDS
TTTGCAAGCTATAGCTCAAG+AGG 0.547144 5_2:-30297678 Msa0767300:intron
TTCCAGCTTAGAATATTGAT+GGG 0.551263 5_2:+30299116 None:intergenic
TGTATGTCGGCCCTATTTGG+AGG 0.554203 5_2:-30297080 Msa0767300:three_prime_UTR
TGTTTCTAGTGACGGTTGGG+CGG 0.557548 5_2:+30304712 None:intergenic
TTGATTATGAATAGATACCA+TGG 0.557943 5_2:-30301406 Msa0767300:intron
ATACCATGGTGAAGCGCAGA+AGG 0.563010 5_2:-30303211 Msa0767300:exon
TGATTATGAATAGATACCAT+GGG 0.566356 5_2:-30301405 Msa0767300:intron
TTGGTGTTCCAAGGAGGGAA+AGG 0.567672 5_2:-30298746 Msa0767300:intron
CAAGTGGGAAGTTTACCTAA+AGG 0.577689 5_2:-30302296 Msa0767300:intron
CATCATTGGTGTTCCAAGGA+GGG 0.577846 5_2:-30298751 Msa0767300:CDS
AAGTGTGCGCAACTTGGAGG+AGG 0.578313 5_2:-30301787 Msa0767300:intron
CAAGAGTAAGAGGCCCTGAA+AGG 0.578582 5_2:-30297862 Msa0767300:CDS
ACAATCAGAACAAGTACAAG+TGG 0.580247 5_2:-30301121 Msa0767300:CDS
AAGATAACTTGAGTGCTAAG+TGG 0.581349 5_2:-30298891 Msa0767300:CDS
CAAACATGACTTGAAAGCAA+AGG 0.581593 5_2:-30298860 Msa0767300:CDS
AGAATTCATATGTGTTGAAG+TGG 0.585760 5_2:-30299222 Msa0767300:CDS
ATATTGTTATTGTAGGAACA+AGG 0.589427 5_2:-30297157 Msa0767300:intron
AAGGATCAACTCTTCTATCA+GGG 0.589458 5_2:+30298794 None:intergenic
CTTTAGGTAATCCTATAGGG+TGG 0.596785 5_2:-30299196 Msa0767300:CDS
TATCTATAATAGATACCGTA+GGG 0.599957 5_2:-30301918 Msa0767300:intron
TTTGAGCCTTATATACATGA+GGG 0.601502 5_2:-30296984 Msa0767300:intron
TGATGATGACTCTAAGTTGA+CGG 0.601505 5_2:+30304676 None:intergenic
ATCAGAACAGCAAATACAAG+TGG 0.601681 5_2:-30301633 Msa0767300:CDS
TACATGATTTAGGTCAGAAG+AGG 0.603402 5_2:-30299292 Msa0767300:intron
ATCAGAACAGCAAATACAAG+TGG 0.607419 5_2:-30302312 Msa0767300:CDS
GAGCCTTATATACATGAGGG+TGG 0.607902 5_2:-30296981 Msa0767300:three_prime_UTR
ATATAAATTTCAGCTCGTGA+AGG 0.611763 5_2:+30298146 None:intergenic
AGTACAAGTGGGAAGTCATG+TGG 0.612341 5_2:-30301109 Msa0767300:CDS
GAGTTTGCACAATTTGAAGG+AGG 0.612839 5_2:-30303089 Msa0767300:intron
AAGTGTGCACAATCTGGAGG+AGG 0.613409 5_2:-30301273 Msa0767300:intron
GTAAGAGGCCCTGAAAGGAA+AGG 0.614183 5_2:-30297857 Msa0767300:CDS
GGTAATCCTATAGGGTGGGA+AGG 0.614249 5_2:-30299191 Msa0767300:CDS
TTTAGGTAATCCTATAGGGT+GGG 0.615133 5_2:-30299195 Msa0767300:CDS
AAGGTTCCACGTCATTCAAG+TGG 0.618564 5_2:-30297815 Msa0767300:CDS
TTTCAAATGTTAGACAACTG+AGG 0.623692 5_2:-30298183 Msa0767300:intron
ACATAACTAATATGTTTGAG+TGG 0.624672 5_2:-30299076 Msa0767300:CDS
TGGCAGTATTGTGAATGAGA+AGG 0.624743 5_2:-30298102 Msa0767300:CDS
CAACCTTCTGCGCTTCACCA+TGG 0.625374 5_2:+30303208 None:intergenic
GAGTGTGACCAATTTGTTGG+AGG 0.625460 5_2:-30300439 Msa0767300:intron
TTATCTATAATAGATACCGT+AGG 0.628158 5_2:-30301919 Msa0767300:intron
GATGTAGTGAATTTGTATGT+CGG 0.629763 5_2:-30297093 Msa0767300:three_prime_UTR
ATAACTTGAGTGCTAAGTGG+AGG 0.640182 5_2:-30298888 Msa0767300:CDS
ATCAGAGCAACAAATACCAG+TGG 0.644406 5_2:-30299450 Msa0767300:CDS
GATGTGTGGAATCTACCAGA+TGG 0.645034 5_2:-30299245 Msa0767300:CDS
AAGAGGTTATACCCGAATGT+CGG 0.647233 5_2:-30299267 Msa0767300:CDS
ACATGATTTAGGTCAGAAGA+GGG 0.648523 5_2:-30299291 Msa0767300:intron
GAAAAGTGTGCACAATCTGG+AGG 0.649034 5_2:-30301276 Msa0767300:CDS
ACTAAAGCACGATATTGAGA+AGG 0.651661 5_2:+30298775 None:intergenic
GATGAACCACTTGAATGACG+TGG 0.651820 5_2:+30297809 None:intergenic
CAATCAGAACAAGTACAAGT+GGG 0.652631 5_2:-30301120 Msa0767300:CDS
ATCAGAACAGCAAATACACG+TGG 0.654486 5_2:-30302928 Msa0767300:CDS
ATAGGTCAAAGTCTACCGAA+AGG 0.655813 5_2:-30301575 Msa0767300:intron
TCAGAACAGCAAATACAAGT+GGG 0.656501 5_2:-30302311 Msa0767300:CDS
ATACCCGAATGTCGGATGTG+TGG 0.657010 5_2:-30299259 Msa0767300:CDS
TTCTTCATAGTAGATACAAG+AGG 0.657110 5_2:-30299518 Msa0767300:intron
ACATCATTGGTGTTCCAAGG+AGG 0.660581 5_2:-30298752 Msa0767300:CDS
TCAGAACAGCAAATACAAGT+GGG 0.674258 5_2:-30301632 Msa0767300:CDS
AGATACAAGAGGAAATCCAG+TGG 0.688047 5_2:-30299507 Msa0767300:CDS
CTATAATAGATACCGTAGGG+AGG 0.692467 5_2:-30301915 Msa0767300:intron
GGAAAACCTGAAGTATGTCG+CGG 0.698881 5_2:+30304634 None:intergenic
ATATGATAGATACCAATGAG+AGG 0.701065 5_2:-30300567 Msa0767300:intron
ATATGATGAAAACAAGACCG+AGG 0.701687 5_2:-30298836 Msa0767300:CDS
TATGAATAGATACCATGGGG+AGG 0.703826 5_2:-30301401 Msa0767300:intron
GGGCATGGTGGTGATACATG+AGG 0.708687 5_2:-30297123 Msa0767300:three_prime_UTR
GATTATGAATAGATACCATG+GGG 0.717244 5_2:-30301404 Msa0767300:intron
TCAGAACAGCAAATACACGT+GGG 0.738302 5_2:-30302927 Msa0767300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTAATTTTAT+AGG - chr5_2:30299273-30299292 Msa0767300:CDS 0.0%
!! GTTAAAAGATAAAAAAAATT+AGG + chr5_2:30299687-30299706 None:intergenic 10.0%
!!! ATTAAAAAATAATTTGACTT+TGG - chr5_2:30299719-30299738 Msa0767300:intron 10.0%
!!! TTAAAAAATAATTTGACTTT+GGG - chr5_2:30299720-30299739 Msa0767300:intron 10.0%
!! TTTAAAAGATAAAAAAATCA+AGG + chr5_2:30300210-30300229 None:intergenic 10.0%
!!! TAAAATTATGTAAGTAATTT+TGG - chr5_2:30300944-30300963 Msa0767300:intron 10.0%
!!! TAATTATTTCTTAATATGAA+TGG - chr5_2:30303441-30303460 Msa0767300:intron 10.0%
!!! AATTATTTCTTAATATGAAT+GGG - chr5_2:30303442-30303461 Msa0767300:intron 10.0%
!! CATAATCTTTAATTAAAATA+GGG + chr5_2:30304288-30304307 None:intergenic 10.0%
!! TCATAATCTTTAATTAAAAT+AGG + chr5_2:30304289-30304308 None:intergenic 10.0%
!! TAAAGCTTATAAGAAAAATA+AGG - chr5_2:30297515-30297534 Msa0767300:exon 15.0%
!! AAAGCTTATAAGAAAAATAA+GGG - chr5_2:30297516-30297535 Msa0767300:exon 15.0%
!!! TTTAAGCTTTTAAAATTGTA+AGG + chr5_2:30297593-30297612 None:intergenic 15.0%
!!! TTTTTTTATTTTCTTTTCCT+AGG - chr5_2:30298343-30298362 Msa0767300:intron 15.0%
!!! ATTATTTTTAATAGATACCA+TGG - chr5_2:30298437-30298456 Msa0767300:intron 15.0%
!!! TTATTTTTAATTGCTACAAA+TGG + chr5_2:30299024-30299043 None:intergenic 15.0%
!! TCATATTTCATTTACTTTAA+TGG - chr5_2:30299580-30299599 Msa0767300:intron 15.0%
!! AAAGATAAAAAAAATTAGGA+GGG + chr5_2:30299683-30299702 None:intergenic 15.0%
!! AAAAGATAAAAAAAATTAGG+AGG + chr5_2:30299684-30299703 None:intergenic 15.0%
!!! ATTTTTTAATTTCTACAAGT+AGG + chr5_2:30299709-30299728 None:intergenic 15.0%
!!! ATTTTTAAAAACGATTTTAG+AGG + chr5_2:30300852-30300871 None:intergenic 15.0%
!! GTAGACATTAAAAAATAAAT+TGG - chr5_2:30301064-30301083 Msa0767300:CDS 15.0%
!! TTAATTGTACAAATTGTTAA+AGG - chr5_2:30301527-30301546 Msa0767300:intron 15.0%
!! TAATTGTACAAATTGTTAAA+GGG - chr5_2:30301528-30301547 Msa0767300:intron 15.0%
!!! TTACTTTCTAAAAGAAAATT+TGG + chr5_2:30301703-30301722 None:intergenic 15.0%
!! ATTACTTGAAATTACATGTT+AGG - chr5_2:30297226-30297245 Msa0767300:intron 20.0%
!! GTTGAAAAGAAATAACAAAT+TGG + chr5_2:30297274-30297293 None:intergenic 20.0%
!! TTTAAAAGCTTAAATCATTG+TGG - chr5_2:30297599-30297618 Msa0767300:intron 20.0%
!!! ATTTTAACTTAATTCAGTTC+AGG + chr5_2:30298027-30298046 None:intergenic 20.0%
!!! TAAAAAGATGAAAAGTACTA+TGG + chr5_2:30298381-30298400 None:intergenic 20.0%
!!! ATTTAAAACTTAGTTGACTT+TGG - chr5_2:30298414-30298433 Msa0767300:intron 20.0%
!! CAGTTAAACATATCAAATTA+GGG + chr5_2:30298926-30298945 None:intergenic 20.0%
!! ACAGTTAAACATATCAAATT+AGG + chr5_2:30298927-30298946 None:intergenic 20.0%
!! ATTATCTATAATAGATACTC+TGG - chr5_2:30299055-30299074 Msa0767300:intron 20.0%
!! ATAATAAATATGACACTTCA+AGG + chr5_2:30299252-30299271 None:intergenic 20.0%
!! ACATACATATGTAAACATAT+AGG + chr5_2:30299424-30299443 None:intergenic 20.0%
!! TACATATGTATGTATCATTT+AGG - chr5_2:30299431-30299450 Msa0767300:CDS 20.0%
!! TTTGTTAAAAATAAATGTGC+AGG - chr5_2:30300121-30300140 Msa0767300:intron 20.0%
!!! CACTTATATTGTAGTTATTT+TGG + chr5_2:30300367-30300386 None:intergenic 20.0%
!! ATGAGTAAAAGATTACTTAA+AGG - chr5_2:30300599-30300618 Msa0767300:intron 20.0%
!! TAAAAGATTACTTAAAGGTA+AGG - chr5_2:30300604-30300623 Msa0767300:intron 20.0%
!! AAAAGATTACTTAAAGGTAA+GGG - chr5_2:30300605-30300624 Msa0767300:intron 20.0%
!! TTTAAAAACACTATTCAAAC+AGG + chr5_2:30300631-30300650 None:intergenic 20.0%
!!! AGTTTTTAAAATGATGAAAC+AGG + chr5_2:30300736-30300755 None:intergenic 20.0%
!! GTAAAAAATATTTATACACG+AGG + chr5_2:30300779-30300798 None:intergenic 20.0%
!!! TTATTTCCTTGTTTATCAAT+TGG - chr5_2:30300812-30300831 Msa0767300:intron 20.0%
!! AATAAACCAATTGATAAACA+AGG + chr5_2:30300821-30300840 None:intergenic 20.0%
!! TTTAGAAAAACAATACTCTT+GGG + chr5_2:30300928-30300947 None:intergenic 20.0%
!!! TTTTAGAAAAACAATACTCT+TGG + chr5_2:30300929-30300948 None:intergenic 20.0%
!! TTATTACATGTGTATCATTT+AGG - chr5_2:30300969-30300988 Msa0767300:intron 20.0%
!!! TATTTTTTAATGTCTACAAG+TGG + chr5_2:30301061-30301080 None:intergenic 20.0%
!!! AGTGTAAATTGATTTATGTT+TGG - chr5_2:30301380-30301399 Msa0767300:CDS 20.0%
!!! GTTTGAATTAAAATTGCTTT+TGG - chr5_2:30301450-30301469 Msa0767300:intron 20.0%
!!! GAAAAAATTAAAGTCCATTT+TGG + chr5_2:30301487-30301506 None:intergenic 20.0%
!! AAAGAGAAAATTTGAGAAAA+AGG - chr5_2:30301993-30302012 Msa0767300:intron 20.0%
!! AAAAGAAACTGTTATGATAT+AGG + chr5_2:30302085-30302104 None:intergenic 20.0%
!! ATGAGTAAAAGTTTAACTAA+AGG - chr5_2:30302270-30302289 Msa0767300:intron 20.0%
!!! TAAAAAACTTTTAAATGCAC+TGG - chr5_2:30302494-30302513 Msa0767300:intron 20.0%
!!! AAAAAACTTTTAAATGCACT+GGG - chr5_2:30302495-30302514 Msa0767300:intron 20.0%
!! ATAACTTCTATATATAGTGA+AGG + chr5_2:30302962-30302981 None:intergenic 20.0%
!!! GTTACTTATTTTCTTTAACA+TGG + chr5_2:30303008-30303027 None:intergenic 20.0%
!! AAATAAGTAACATCAACAAA+AGG - chr5_2:30303017-30303036 Msa0767300:intron 20.0%
!! TTTGTTTATTACTGAAAAAG+TGG - chr5_2:30303309-30303328 Msa0767300:intron 20.0%
!! TTGTTTATTACTGAAAAAGT+GGG - chr5_2:30303310-30303329 Msa0767300:intron 20.0%
!!! TTGTAAGAATTTGAATTTTC+AGG - chr5_2:30303595-30303614 Msa0767300:intron 20.0%
!!! TTTTGTCTTATATTTTGTGT+AGG - chr5_2:30303687-30303706 Msa0767300:intron 20.0%
!!! TTTGTCTTATATTTTGTGTA+GGG - chr5_2:30303688-30303707 Msa0767300:intron 20.0%
!! AAGATCTAATGTTGAAAATA+GGG - chr5_2:30303879-30303898 Msa0767300:intron 20.0%
!!! ACAAATTAGAAAATTTGCTT+GGG - chr5_2:30303905-30303924 Msa0767300:intron 20.0%
!! TCTTCAAAAAGTTGAATTAT+AGG + chr5_2:30304018-30304037 None:intergenic 20.0%
!! TTATGATGAATTACAATAAG+TGG - chr5_2:30304303-30304322 Msa0767300:intron 20.0%
!!! TAAATAAATTTGTTTCGCAA+AGG + chr5_2:30304409-30304428 None:intergenic 20.0%
!! TTGTTCAATGTTAAGTTTAT+TGG - chr5_2:30304621-30304640 Msa0767300:intron 20.0%
!! CTGAATTATACAAACAAAAA+GGG + chr5_2:30304711-30304730 None:intergenic 20.0%
!! ACTGAATTATACAAACAAAA+AGG + chr5_2:30304712-30304731 None:intergenic 20.0%
!! TTTGTTTGTATAATTCAGTA+CGG - chr5_2:30304713-30304732 Msa0767300:five_prime_UTR 20.0%
! TTGAAATTACATGTTAGGTT+AGG - chr5_2:30297231-30297250 Msa0767300:intron 25.0%
!! TCAACATCTTAATGCATTTT+AGG - chr5_2:30297289-30297308 Msa0767300:intron 25.0%
!! TAATGAAAGATTACGGTTTT+GGG + chr5_2:30297321-30297340 None:intergenic 25.0%
! CCAAATGTAATGAAAGATTA+CGG + chr5_2:30297328-30297347 None:intergenic 25.0%
!! TTCCATTTTCATAGATATCT+TGG + chr5_2:30297488-30297507 None:intergenic 25.0%
! TTTATTGAACAAAGAATACG+AGG - chr5_2:30297716-30297735 Msa0767300:CDS 25.0%
! CCTTACATTTCTAATAAATG+GGG + chr5_2:30297879-30297898 None:intergenic 25.0%
! GCCTTACATTTCTAATAAAT+GGG + chr5_2:30297880-30297899 None:intergenic 25.0%
! AGCCTTACATTTCTAATAAA+TGG + chr5_2:30297881-30297900 None:intergenic 25.0%
!!! GATTTCACAATCCATTTTTA+CGG + chr5_2:30297967-30297986 None:intergenic 25.0%
!!! AAAAATGGATTGTGAAATCT+TGG - chr5_2:30297968-30297987 Msa0767300:intron 25.0%
!! TTGAATACAGTCTCTTTTAT+TGG - chr5_2:30297999-30298018 Msa0767300:intron 25.0%
!! TGAATACAGTCTCTTTTATT+GGG - chr5_2:30298000-30298019 Msa0767300:intron 25.0%
!!! AGTACTTCGAAAATTTTGAT+AGG + chr5_2:30298216-30298235 None:intergenic 25.0%
! AACCATATATGTATTGTCAT+TGG + chr5_2:30298307-30298326 None:intergenic 25.0%
! TACATATATGGTTTAGTGAA+AGG - chr5_2:30298314-30298333 Msa0767300:intron 25.0%
!!! TTCATCTTTTTAATTGCTTG+CGG - chr5_2:30298389-30298408 Msa0767300:intron 25.0%
!! GTTGAATATCCTATTTCTTA+TGG - chr5_2:30298765-30298784 Msa0767300:CDS 25.0%
! AAAAAACTTCACTTACCTTT+AGG + chr5_2:30298810-30298829 None:intergenic 25.0%
! AATGATACACAGTTAAACAT+AGG + chr5_2:30298935-30298954 None:intergenic 25.0%
!! ATGTATGTATCATTTAGGTT+TGG - chr5_2:30299436-30299455 Msa0767300:CDS 25.0%
! TGTTAGACAAAGACAAATTA+GGG + chr5_2:30299494-30299513 None:intergenic 25.0%
! ATGTTAGACAAAGACAAATT+AGG + chr5_2:30299495-30299514 None:intergenic 25.0%
! TTATCTATAATAGATACCGT+AGG - chr5_2:30299743-30299762 Msa0767300:intron 25.0%
! TATCTATAATAGATACCGTA+GGG - chr5_2:30299744-30299763 Msa0767300:intron 25.0%
! AGATACAAGAGAGAATTTAA+TGG - chr5_2:30299972-30299991 Msa0767300:intron 25.0%
! TGTTTACCTATGTATCATTT+AGG - chr5_2:30300156-30300175 Msa0767300:intron 25.0%
! TTGATTATGAATAGATACCA+TGG - chr5_2:30300256-30300275 Msa0767300:intron 25.0%
! TGATTATGAATAGATACCAT+GGG - chr5_2:30300257-30300276 Msa0767300:intron 25.0%
! GAATTCAAAATCAAAAAGCA+TGG + chr5_2:30300459-30300478 None:intergenic 25.0%
! TCTTTATAGTATCTACAAGA+AGG - chr5_2:30300477-30300496 Msa0767300:CDS 25.0%
! AAGAAGAAAATCTGATGAAA+TGG - chr5_2:30300683-30300702 Msa0767300:intron 25.0%
!! AGGAAATAAAAAAACTTGCT+TGG + chr5_2:30300801-30300820 None:intergenic 25.0%
! TTAGAAAAACAATACTCTTG+GGG + chr5_2:30300927-30300946 None:intergenic 25.0%
!! CATTTATATTGTGGTTGTTT+TGG + chr5_2:30301201-30301220 None:intergenic 25.0%
!! TTTTGTTAGGAAATAGGATA+AGG - chr5_2:30301269-30301288 Msa0767300:intron 25.0%
! TCTTATCAATTCATGTTGTT+TGG - chr5_2:30301424-30301443 Msa0767300:intron 25.0%
! TTGGTGTAAATATATATGCT+TGG + chr5_2:30301684-30301703 None:intergenic 25.0%
! AACTGTTATGATATAGGATA+AGG + chr5_2:30302079-30302098 None:intergenic 25.0%
! ATACTTTAGGTAATCCTATA+GGG - chr5_2:30302463-30302482 Msa0767300:intron 25.0%
! ATATTAGTTATGTTCAACTC+TGG + chr5_2:30302579-30302598 None:intergenic 25.0%
! ACATAACTAATATGTTTGAG+TGG - chr5_2:30302586-30302605 Msa0767300:intron 25.0%
!! TGATTTTTGATAGAACACTA+TGG + chr5_2:30303202-30303221 None:intergenic 25.0%
! AACATAAAATGTGTACAACA+GGG + chr5_2:30303290-30303309 None:intergenic 25.0%
! AAACATAAAATGTGTACAAC+AGG + chr5_2:30303291-30303310 None:intergenic 25.0%
!! TGAATTAAAAAAGCATATGG+TGG - chr5_2:30303711-30303730 Msa0767300:intron 25.0%
! GAAGATCTAATGTTGAAAAT+AGG - chr5_2:30303878-30303897 Msa0767300:intron 25.0%
!! CAAGCAAATTTTCTAATTTG+TGG + chr5_2:30303906-30303925 None:intergenic 25.0%
!! CACAAATTAGAAAATTTGCT+TGG - chr5_2:30303904-30303923 Msa0767300:intron 25.0%
! GATTATGATGATTTACACTT+AGG - chr5_2:30304062-30304081 Msa0767300:intron 25.0%
!! CTGAGTAATATTGTTATTGT+AGG - chr5_2:30304498-30304517 Msa0767300:intron 25.0%
!! ATATTGTTATTGTAGGAACA+AGG - chr5_2:30304505-30304524 Msa0767300:intron 25.0%
! AATCAGGTAAACAATTACTT+GGG + chr5_2:30304659-30304678 None:intergenic 25.0%
! AAATCAGGTAAACAATTACT+TGG + chr5_2:30304660-30304679 None:intergenic 25.0%
GAAGAAGAAGAAGAATAAGA+AGG + chr5_2:30297052-30297071 None:intergenic 30.0%
CTTAATTTACAGCGTAAATG+GGG + chr5_2:30297180-30297199 None:intergenic 30.0%
GCTTAATTTACAGCGTAAAT+GGG + chr5_2:30297181-30297200 None:intergenic 30.0%
AGCTTAATTTACAGCGTAAA+TGG + chr5_2:30297182-30297201 None:intergenic 30.0%
ATTACATGTTAGGTTAGGTT+AGG - chr5_2:30297236-30297255 Msa0767300:intron 30.0%
TTACATGTTAGGTTAGGTTA+GGG - chr5_2:30297237-30297256 Msa0767300:intron 30.0%
! AATGAAAGATTACGGTTTTG+GGG + chr5_2:30297320-30297339 None:intergenic 30.0%
! GTAATGAAAGATTACGGTTT+TGG + chr5_2:30297322-30297341 None:intergenic 30.0%
CCGTAATCTTTCATTACATT+TGG - chr5_2:30297325-30297344 Msa0767300:intron 30.0%
CCAATAGATAAGCTCAAATA+AGG + chr5_2:30297389-30297408 None:intergenic 30.0%
! CCTTATTTGAGCTTATCTAT+TGG - chr5_2:30297386-30297405 Msa0767300:intron 30.0%
! ATAAATTTTGTGAGACCGAT+TGG - chr5_2:30297410-30297429 Msa0767300:intron 30.0%
! TAAATTTTGTGAGACCGATT+GGG - chr5_2:30297411-30297430 Msa0767300:intron 30.0%
CTCCAAGATATCTATGAAAA+TGG - chr5_2:30297483-30297502 Msa0767300:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr5_2:30297557-30297576 Msa0767300:CDS 30.0%
! AAGGTATTTAAGTTCCTGTT+TGG + chr5_2:30297574-30297593 None:intergenic 30.0%
CTATAACTCATCAATTTGAC+TGG + chr5_2:30297655-30297674 None:intergenic 30.0%
TGATGAGTTATAGTTGAAAG+AGG - chr5_2:30297662-30297681 Msa0767300:intron 30.0%
! GTTGAAAGAGGTGTATAAAT+AGG - chr5_2:30297674-30297693 Msa0767300:intron 30.0%
TTAACGACTCCTAAAAAATG+GGG + chr5_2:30297776-30297795 None:intergenic 30.0%
GTTAACGACTCCTAAAAAAT+GGG + chr5_2:30297777-30297796 None:intergenic 30.0%
AGTTAACGACTCCTAAAAAA+TGG + chr5_2:30297778-30297797 None:intergenic 30.0%
CTAATAAATGGGGAATATAG+TGG + chr5_2:30297869-30297888 None:intergenic 30.0%
CCCCATTTATTAGAAATGTA+AGG - chr5_2:30297876-30297895 Msa0767300:CDS 30.0%
AGTTTCCGAGATAAATTGTT+CGG - chr5_2:30297936-30297955 Msa0767300:CDS 30.0%
AAACACCGAACAATTTATCT+CGG + chr5_2:30297944-30297963 None:intergenic 30.0%
GTACTTATCAAATAGAACAG+AGG - chr5_2:30298231-30298250 Msa0767300:intron 30.0%
TGCCAATGACAATACATATA+TGG - chr5_2:30298302-30298321 Msa0767300:intron 30.0%
TTGAATGTTGTTCGAAAAAG+TGG - chr5_2:30298474-30298493 Msa0767300:intron 30.0%
! CTGTTTTACTGTGTTTGTTT+TGG + chr5_2:30298551-30298570 None:intergenic 30.0%
! TCCTATTTCTTATGGTAGAA+TGG - chr5_2:30298773-30298792 Msa0767300:CDS 30.0%
! CCTATTTCTTATGGTAGAAT+GGG - chr5_2:30298774-30298793 Msa0767300:CDS 30.0%
ATGGGTAAAAGTTTACCTAA+AGG - chr5_2:30298792-30298811 Msa0767300:CDS 30.0%
TGTTTACATGTGTCTCATTT+AGG - chr5_2:30298863-30298882 Msa0767300:CDS 30.0%
!! TTGTATTTGCTGTTCTGATT+GGG + chr5_2:30299349-30299368 None:intergenic 30.0%
AAAACACTACACTTACCTTT+AGG + chr5_2:30299384-30299403 None:intergenic 30.0%
TCTAACATGCACAAACAAAA+TGG - chr5_2:30299507-30299526 Msa0767300:CDS 30.0%
! GCATAAAGTTTAAAGCTGTT+GGG - chr5_2:30299771-30299790 Msa0767300:intron 30.0%
!! CACACTTTTTGTTTATACGA+TGG + chr5_2:30299862-30299881 None:intergenic 30.0%
! CTGATTGTGATTCATGATTT+TGG + chr5_2:30300014-30300033 None:intergenic 30.0%
!! GCTGAATATCCTATTTCTTT+TGG - chr5_2:30300060-30300079 Msa0767300:intron 30.0%
CCTATTCTACCAAAAGAAAT+AGG + chr5_2:30300072-30300091 None:intergenic 30.0%
!! CCTATTTCTTTTGGTAGAAT+AGG - chr5_2:30300069-30300088 Msa0767300:intron 30.0%
! ACCTATGTATCATTTAGGTT+TGG - chr5_2:30300161-30300180 Msa0767300:intron 30.0%
ACCAAACCTAAATGATACAT+AGG + chr5_2:30299440-30299459 None:intergenic 30.0%
GATTATGAATAGATACCATG+GGG - chr5_2:30300258-30300277 Msa0767300:intron 30.0%
TTGAATGCTGTTAGAAAAAG+TGG - chr5_2:30300293-30300312 Msa0767300:intron 30.0%
CCTTAGAGCTATCAATTAAT+TGG + chr5_2:30300337-30300356 None:intergenic 30.0%
! CCAATTAATTGATAGCTCTA+AGG - chr5_2:30300334-30300353 Msa0767300:intron 30.0%
! AAAAAGCATGGAACTTCAAA+AGG + chr5_2:30300447-30300466 None:intergenic 30.0%
!! TTTGATTGTGTTTTGGACTT+TGG + chr5_2:30300900-30300919 None:intergenic 30.0%
ATATGATAGATACCAATGAG+AGG - chr5_2:30301095-30301114 Msa0767300:CDS 30.0%
CACACTCTTCATTTATATTG+TGG + chr5_2:30301210-30301229 None:intergenic 30.0%
ATTTCATACCTCCAACAAAT+TGG + chr5_2:30301234-30301253 None:intergenic 30.0%
! TTGTTTGCTCAGTTTTTGTT+AGG - chr5_2:30301256-30301275 Msa0767300:intron 30.0%
! CTCAGTTTTTGTTAGGAAAT+AGG - chr5_2:30301263-30301282 Msa0767300:intron 30.0%
ATAAGGATTAAGTGTGTGTT+TGG - chr5_2:30301286-30301305 Msa0767300:CDS 30.0%
TGGATGTGAAATTACCAAAA+TGG - chr5_2:30301470-30301489 Msa0767300:intron 30.0%
! GAATTGATTCCAAGCATTTA+TGG + chr5_2:30301582-30301601 None:intergenic 30.0%
! AAGCATTTAACGTGATTTTG+GGG + chr5_2:30301656-30301675 None:intergenic 30.0%
! CAAGCATTTAACGTGATTTT+GGG + chr5_2:30301657-30301676 None:intergenic 30.0%
! TCAAGCATTTAACGTGATTT+TGG + chr5_2:30301658-30301677 None:intergenic 30.0%
TTCTCGTGATTTAATCAACA+GGG + chr5_2:30301837-30301856 None:intergenic 30.0%
ATTCTCGTGATTTAATCAAC+AGG + chr5_2:30301838-30301857 None:intergenic 30.0%
!! TCACACTCATTTTTCTTTGT+TGG + chr5_2:30301960-30301979 None:intergenic 30.0%
GGTTAAGAAAGTGAAAATGT+TGG - chr5_2:30302014-30302033 Msa0767300:intron 30.0%
TTCTTCATAGTAGATACAAG+AGG - chr5_2:30302144-30302163 Msa0767300:intron 30.0%
CTCATTCTACTAACAGAATT+AGG + chr5_2:30302255-30302274 None:intergenic 30.0%
ATACCTTTGCATATGATGTA+TGG - chr5_2:30302329-30302348 Msa0767300:CDS 30.0%
AAACCATACATCATATGCAA+AGG + chr5_2:30302335-30302354 None:intergenic 30.0%
AGAATTCATATGTGTTGAAG+TGG - chr5_2:30302440-30302459 Msa0767300:intron 30.0%
GATACTTTAGGTAATCCTAT+AGG - chr5_2:30302462-30302481 Msa0767300:intron 30.0%
TTCCAGCTTAGAATATTGAT+GGG + chr5_2:30302549-30302568 None:intergenic 30.0%
TTTCCAGCTTAGAATATTGA+TGG + chr5_2:30302550-30302569 None:intergenic 30.0%
TAATATGTTTGAGTGGATAC+AGG - chr5_2:30302593-30302612 Msa0767300:intron 30.0%
TCGTAAGACATACAGTAAAA+AGG + chr5_2:30302664-30302683 None:intergenic 30.0%
!! TAGTATTTGCTTTGTTTGCT+CGG + chr5_2:30302750-30302769 None:intergenic 30.0%
AAACATGACTTGAAAGCAAA+GGG - chr5_2:30302803-30302822 Msa0767300:intron 30.0%
TTTCAAATGTTAGACAACTG+AGG - chr5_2:30303479-30303498 Msa0767300:intron 30.0%
ATATAAATTTCAGCTCGTGA+AGG + chr5_2:30303519-30303538 None:intergenic 30.0%
CAATCAATAGCTTCAATCAT+CGG + chr5_2:30303635-30303654 None:intergenic 30.0%
! GGGTGAATTAAAAAAGCATA+TGG - chr5_2:30303708-30303727 Msa0767300:intron 30.0%
! ATTAAAAAAGCATATGGTGG+AGG - chr5_2:30303714-30303733 Msa0767300:intron 30.0%
AGACTCAAGATTCTACAAAT+TGG - chr5_2:30303761-30303780 Msa0767300:intron 30.0%
GACTCAAGATTCTACAAATT+GGG - chr5_2:30303762-30303781 Msa0767300:intron 30.0%
TCCTAATGATTTCTCTAGTA+AGG - chr5_2:30304104-30304123 Msa0767300:intron 30.0%
TCCTTACTAGAGAAATCATT+AGG + chr5_2:30304108-30304127 None:intergenic 30.0%
!! TAGTTTGTTGTGATATGAGA+TGG - chr5_2:30304190-30304209 Msa0767300:intron 30.0%
! ATGGAAATGCATTTTCACTT+TGG - chr5_2:30304209-30304228 Msa0767300:intron 30.0%
! TCACTTTGGAAAATTGTTCT+TGG - chr5_2:30304223-30304242 Msa0767300:intron 30.0%
! CACTTTGGAAAATTGTTCTT+GGG - chr5_2:30304224-30304243 Msa0767300:intron 30.0%
!!! AAATTTTAACTGCCAGTGTT+CGG - chr5_2:30304447-30304466 Msa0767300:intron 30.0%
!! TAGGAACAAGGTTTTGATAT+AGG - chr5_2:30304517-30304536 Msa0767300:intron 30.0%
!! AGGAACAAGGTTTTGATATA+GGG - chr5_2:30304518-30304537 Msa0767300:intron 30.0%
GATGTAGTGAATTTGTATGT+CGG - chr5_2:30304569-30304588 Msa0767300:intron 30.0%
AACAATTACTTGGGAAATCT+TGG + chr5_2:30304650-30304669 None:intergenic 30.0%
TGTATATAAGGCTCAAAATC+AGG + chr5_2:30304675-30304694 None:intergenic 30.0%
!! TTTTGAGCCTTATATACATG+AGG - chr5_2:30304677-30304696 Msa0767300:five_prime_UTR 30.0%
! TTTGAGCCTTATATACATGA+GGG - chr5_2:30304678-30304697 Msa0767300:five_prime_UTR 30.0%
!!! TTTTGTTTCTAGTGACGGTT+GGG + chr5_2:30296956-30296975 None:intergenic 35.0%
!!! CTCAGTTTTGTTTCTAGTGA+CGG + chr5_2:30296961-30296980 None:intergenic 35.0%
! TGATGATGACTCTAAGTTGA+CGG + chr5_2:30296989-30297008 None:intergenic 35.0%
ATCACACTGAAAGCAAAGTA+AGG - chr5_2:30297005-30297024 Msa0767300:intron 35.0%
ATGTCATAAGTTCTCCCAAT+CGG + chr5_2:30297428-30297447 None:intergenic 35.0%
GTATAAATAGGATCGTCACA+CGG - chr5_2:30297686-30297705 Msa0767300:CDS 35.0%
!!! CACTATGTTCCCCATTTTTT+AGG - chr5_2:30297764-30297783 Msa0767300:CDS 35.0%
ATGATGTAACTGTAATTGCC+TGG - chr5_2:30297808-30297827 Msa0767300:CDS 35.0%
TATGGCACAAATCACAAATG+GGG + chr5_2:30297840-30297859 None:intergenic 35.0%
CTATGGCACAAATCACAAAT+GGG + chr5_2:30297841-30297860 None:intergenic 35.0%
ACTATGGCACAAATCACAAA+TGG + chr5_2:30297842-30297861 None:intergenic 35.0%
GGAATATAGTGGCAAAACTA+TGG + chr5_2:30297858-30297877 None:intergenic 35.0%
TCTTTCACTTCAACTTTCTG+AGG + chr5_2:30298080-30298099 None:intergenic 35.0%
CATGTGTGAATTCTATTGAG+TGG + chr5_2:30298146-30298165 None:intergenic 35.0%
ATGGTTATAAAGGAAGTGAG+GGG + chr5_2:30298169-30298188 None:intergenic 35.0%
GATGGTTATAAAGGAAGTGA+GGG + chr5_2:30298170-30298189 None:intergenic 35.0%
AGATGGTTATAAAGGAAGTG+AGG + chr5_2:30298171-30298190 None:intergenic 35.0%
ATGGAGTGAGATGGTTATAA+AGG + chr5_2:30298179-30298198 None:intergenic 35.0%
TCACTCCATTTCCTCTTAAT+GGG - chr5_2:30298190-30298209 Msa0767300:intron 35.0%
!! ATTTTGATAGGCCCATTAAG+AGG + chr5_2:30298204-30298223 None:intergenic 35.0%
!! ATTAGTGAGCAAAAGCATCA+TGG + chr5_2:30298283-30298302 None:intergenic 35.0%
GAAGAGTTTGCACAATTTGA+AGG - chr5_2:30298570-30298589 Msa0767300:intron 35.0%
! CTGATTGTGGTACATCATTT+TGG + chr5_2:30298719-30298738 None:intergenic 35.0%
!! TGTATTTGCTGTTCTGATTG+TGG + chr5_2:30298732-30298751 None:intergenic 35.0%
CCCATTCTACCATAAGAAAT+AGG + chr5_2:30298777-30298796 None:intergenic 35.0%
TGAGACACATGTAAACAAAG+AGG + chr5_2:30298860-30298879 None:intergenic 35.0%
! ACATGTGTCTCATTTAGGTT+TGG - chr5_2:30298868-30298887 Msa0767300:CDS 35.0%
! CTATAATAGATACTCTGGAG+AGG - chr5_2:30299060-30299079 Msa0767300:intron 35.0%
GTGCACACTCTACATTTATA+CGG + chr5_2:30299177-30299196 None:intergenic 35.0%
ATATGACACTTCAAGGCAAA+AGG + chr5_2:30299245-30299264 None:intergenic 35.0%
! CTGATTGGGATTCATGATTT+TGG + chr5_2:30299335-30299354 None:intergenic 35.0%
!! CTTGTATTTGCTGTTCTGAT+TGG + chr5_2:30299350-30299369 None:intergenic 35.0%
ATCAGAACAGCAAATACAAG+TGG - chr5_2:30299350-30299369 Msa0767300:intron 35.0%
TCAGAACAGCAAATACAAGT+GGG - chr5_2:30299351-30299370 Msa0767300:intron 35.0%
GGTGAGATTTATTGATCCAA+TGG - chr5_2:30299601-30299620 Msa0767300:intron 35.0%
GAGATTTATTGATCCAATGG+TGG - chr5_2:30299604-30299623 Msa0767300:intron 35.0%
! CGCATAAAGTTTAAAGCTGT+TGG - chr5_2:30299770-30299789 Msa0767300:intron 35.0%
! AAGTTTAAAGCTGTTGGGAA+AGG - chr5_2:30299776-30299795 Msa0767300:intron 35.0%
! TGTTTATACGATGGTCGTTT+TGG + chr5_2:30299853-30299872 None:intergenic 35.0%
!! GATTCATGATTTTGGTGACA+TGG + chr5_2:30300006-30300025 None:intergenic 35.0%
ATCAGAACAGCAAATACAAG+TGG - chr5_2:30299350-30299369 Msa0767300:intron 35.0%
TCAGAACAGCAAATACAAGT+GGG - chr5_2:30299351-30299370 Msa0767300:intron 35.0%
CAAACACTACACTTACCTTT+CGG + chr5_2:30300105-30300124 None:intergenic 35.0%
GTACTTGTTCTGATTGTGAT+TGG + chr5_2:30300538-30300557 None:intergenic 35.0%
ACAATCAGAACAAGTACAAG+TGG - chr5_2:30300541-30300560 Msa0767300:CDS 35.0%
CAATCAGAACAAGTACAAGT+GGG - chr5_2:30300542-30300561 Msa0767300:CDS 35.0%
CTCATTCTACCAAATGAAGT+AGG + chr5_2:30300584-30300603 None:intergenic 35.0%
ATACCAATGAGAGGAACAAA+AGG - chr5_2:30301104-30301123 Msa0767300:CDS 35.0%
!!! CCACTTTTTCGAACAACATT+CGG + chr5_2:30298477-30298496 None:intergenic 35.0%
CGAATGTTGTTCGAAAAAGT+GGG - chr5_2:30301128-30301147 Msa0767300:CDS 35.0%
! AGCATTTAACGTGATTTTGG+GGG + chr5_2:30301655-30301674 None:intergenic 35.0%
AAGGTAGTGATTGACTAGAT+AGG + chr5_2:30301797-30301816 None:intergenic 35.0%
GGTTCTGTATATAGGGATAA+AGG + chr5_2:30301816-30301835 None:intergenic 35.0%
TCAACAGGGTTCTGTATATA+GGG + chr5_2:30301823-30301842 None:intergenic 35.0%
ATCAACAGGGTTCTGTATAT+AGG + chr5_2:30301824-30301843 None:intergenic 35.0%
!! CTCATTTTTCTTTGTTGGAG+AGG + chr5_2:30301955-30301974 None:intergenic 35.0%
CAAAGAAAAATGAGTGTGAG+AGG - chr5_2:30301961-30301980 Msa0767300:intron 35.0%
AGAAAGTGAAAATGTTGGAG+AGG - chr5_2:30302019-30302038 Msa0767300:intron 35.0%
GAAAGTGAAAATGTTGGAGA+GGG - chr5_2:30302020-30302039 Msa0767300:intron 35.0%
TTTGTTGCTCTGATTGTGAT+TGG + chr5_2:30302206-30302225 None:intergenic 35.0%
! GTTTCAACATGATTTTCCAC+TGG + chr5_2:30302231-30302250 None:intergenic 35.0%
GTGACATCCATACATGATTT+AGG - chr5_2:30302360-30302379 Msa0767300:CDS 35.0%
CTTCTGACCTAAATCATGTA+TGG + chr5_2:30302370-30302389 None:intergenic 35.0%
TACATGATTTAGGTCAGAAG+AGG - chr5_2:30302370-30302389 Msa0767300:CDS 35.0%
ACATGATTTAGGTCAGAAGA+GGG - chr5_2:30302371-30302390 Msa0767300:intron 35.0%
ACACATATGAATTCTCCATC+TGG + chr5_2:30302435-30302454 None:intergenic 35.0%
TGTGTTGAAGTGGATACTTT+AGG - chr5_2:30302450-30302469 Msa0767300:intron 35.0%
TTTAGGTAATCCTATAGGGT+GGG - chr5_2:30302467-30302486 Msa0767300:intron 35.0%
GAGTAAGTTTCACTTTGTTC+CGG - chr5_2:30302718-30302737 Msa0767300:intron 35.0%
AAGATAACTTGAGTGCTAAG+TGG - chr5_2:30302771-30302790 Msa0767300:intron 35.0%
CAAACATGACTTGAAAGCAA+AGG - chr5_2:30302802-30302821 Msa0767300:intron 35.0%
ATATGATGAAAACAAGACCG+AGG - chr5_2:30302826-30302845 Msa0767300:intron 35.0%
AAGGATCAACTCTTCTATCA+GGG + chr5_2:30302871-30302890 None:intergenic 35.0%
ACTAAAGCACGATATTGAGA+AGG + chr5_2:30302890-30302909 None:intergenic 35.0%
ATCGTGCTTTAGTACATCAT+TGG - chr5_2:30302897-30302916 Msa0767300:CDS 35.0%
! ATACGAGGATTTTCATTGCA+TGG - chr5_2:30303051-30303070 Msa0767300:intron 35.0%
! TACGAGGATTTTCATTGCAT+GGG - chr5_2:30303052-30303071 Msa0767300:intron 35.0%
!! ACTTTTGATTGCACTCTTCA+TGG + chr5_2:30303389-30303408 None:intergenic 35.0%
! GTAGAATCTTGAGTCTTTTG+AGG + chr5_2:30303757-30303776 None:intergenic 35.0%
!! GAGAAATCATTAGGAGTACT+TGG + chr5_2:30304099-30304118 None:intergenic 35.0%
AACTACAAGTGACAGTGATT+GGG - chr5_2:30304134-30304153 Msa0767300:intron 35.0%
GAAAATTGATACTGCCATAC+TGG - chr5_2:30304156-30304175 Msa0767300:intron 35.0%
CTATAGTTTACTCACCAGTA+TGG + chr5_2:30304173-30304192 None:intergenic 35.0%
GGGATAGCAATAACAACAAA+TGG + chr5_2:30304250-30304269 None:intergenic 35.0%
ATAGGGAAAAGCTAAGAGAA+CGG + chr5_2:30304271-30304290 None:intergenic 35.0%
TTCAAGTGTATCAAGCAATG+AGG - chr5_2:30304363-30304382 Msa0767300:intron 35.0%
AATTTGCAGCACGGAAAAAA+GGG + chr5_2:30304432-30304451 None:intergenic 35.0%
AAATTTGCAGCACGGAAAAA+AGG + chr5_2:30304433-30304452 None:intergenic 35.0%
!! GGAACAAGGTTTTGATATAG+GGG - chr5_2:30304519-30304538 Msa0767300:intron 35.0%
!!! GTTTTGTTTCTAGTGACGGT+TGG + chr5_2:30296957-30296976 None:intergenic 40.0%
GGAACATAGTGCCAAAACTA+TGG + chr5_2:30297755-30297774 None:intergenic 40.0%
!! GTTCGGTGTTTCCGTAAAAA+TGG - chr5_2:30297953-30297972 Msa0767300:CDS 40.0%
TAAGAGGAAATGGAGTGAGA+TGG + chr5_2:30298188-30298207 None:intergenic 40.0%
CTCACTCCATTTCCTCTTAA+TGG - chr5_2:30298189-30298208 Msa0767300:intron 40.0%
ATAGGCCCATTAAGAGGAAA+TGG + chr5_2:30298198-30298217 None:intergenic 40.0%
TATGGCTGTAAACTTCACCT+AGG + chr5_2:30298363-30298382 None:intergenic 40.0%
TCGAAAAAGTGGCAAATCAC+AGG - chr5_2:30298485-30298504 Msa0767300:intron 40.0%
GAGTTTGCACAATTTGAAGG+AGG - chr5_2:30298573-30298592 Msa0767300:intron 40.0%
GAGGTGTGGAAAATTGTTGT+TGG - chr5_2:30298592-30298611 Msa0767300:intron 40.0%
ATCAGAACAGCAAATACACG+TGG - chr5_2:30298734-30298753 Msa0767300:intron 40.0%
TCAGAACAGCAAATACACGT+GGG - chr5_2:30298735-30298754 Msa0767300:intron 40.0%
AGGTTGAGTGTTCGAAAAAG+TGG - chr5_2:30299089-30299108 Msa0767300:CDS 40.0%
! CATTTATACGGTGGCTGTTT+TGG + chr5_2:30299165-30299184 None:intergenic 40.0%
CACACTCTACATTTATACGG+TGG + chr5_2:30299174-30299193 None:intergenic 40.0%
AATGTAGAGTGTGCACATTG+TGG - chr5_2:30299181-30299200 Msa0767300:CDS 40.0%
AGGCACGAGAGAGAATTTAA+TGG - chr5_2:30299293-30299312 Msa0767300:intron 40.0%
CAAGTGGGAAGTTTACCTAA+AGG - chr5_2:30299366-30299385 Msa0767300:intron 40.0%
! ACAAGTGTCTTTTCCACCAT+TGG - chr5_2:30299543-30299562 Msa0767300:intron 40.0%
! GATGCGACTTTTTGATCCAA+TGG + chr5_2:30299562-30299581 None:intergenic 40.0%
AAATTAGGAGGGCAACTCTA+TGG + chr5_2:30299672-30299691 None:intergenic 40.0%
CTATAATAGATACCGTAGGG+AGG - chr5_2:30299747-30299766 Msa0767300:intron 40.0%
! TTTAAAGCTGTTGGGAAAGG+TGG - chr5_2:30299779-30299798 Msa0767300:intron 40.0%
! AACAAAAAGTGTGCGCAACT+TGG - chr5_2:30299869-30299888 Msa0767300:intron 40.0%
ATAGGTCAAAGTCTACCGAA+AGG - chr5_2:30300087-30300106 Msa0767300:intron 40.0%
TATGAATAGATACCATGGGG+AGG - chr5_2:30300261-30300280 Msa0767300:intron 40.0%
TAGAAAAAGTGGCAAAGCAC+AGG - chr5_2:30300304-30300323 Msa0767300:intron 40.0%
! AGTGAAAAGTGTGCACAATC+TGG - chr5_2:30300383-30300402 Msa0767300:intron 40.0%
ATCTACAAGAAGGAGCCTAA+TGG - chr5_2:30300487-30300506 Msa0767300:CDS 40.0%
!! GGTTAAGACTTGCTACCATT+AGG + chr5_2:30300505-30300524 None:intergenic 40.0%
GCAAGTCTTAACCACCAAAA+TGG - chr5_2:30300512-30300531 Msa0767300:CDS 40.0%
!! ATTGTGATTGGCCATTTTGG+TGG + chr5_2:30300526-30300545 None:intergenic 40.0%
!! CTGATTGTGATTGGCCATTT+TGG + chr5_2:30300529-30300548 None:intergenic 40.0%
GTGGAATCTCCTACTTCATT+TGG - chr5_2:30300572-30300591 Msa0767300:intron 40.0%
!! GGGCTTGTTTGATTGTGTTT+TGG + chr5_2:30300907-30300926 None:intergenic 40.0%
CCGAATGTTGTTCGAAAAAG+TGG - chr5_2:30301127-30301146 Msa0767300:CDS 40.0%
! GAAGAGTGTGACCAATTTGT+TGG - chr5_2:30301220-30301239 Msa0767300:intron 40.0%
TAAGTGTGTGTTTGGTTGTG+CGG - chr5_2:30301294-30301313 Msa0767300:CDS 40.0%
AGTGTAGCACCATAAATGCT+TGG - chr5_2:30301570-30301589 Msa0767300:intron 40.0%
!! GCTTCAGCTTGAATCGATTT+TGG - chr5_2:30301629-30301648 Msa0767300:CDS 40.0%
GTTCTACAAGCTTACCATTC+AGG - chr5_2:30301902-30301921 Msa0767300:CDS 40.0%
CGAGAGAAGTTTCATTGTAG+AGG - chr5_2:30302045-30302064 Msa0767300:intron 40.0%
AGATACAAGAGGAAATCCAG+TGG - chr5_2:30302155-30302174 Msa0767300:intron 40.0%
! GATTGGTCACTTTGGAGATT+AGG + chr5_2:30302189-30302208 None:intergenic 40.0%
! CTGATTGTGATTGGTCACTT+TGG + chr5_2:30302197-30302216 None:intergenic 40.0%
ATCAGAGCAACAAATACCAG+TGG - chr5_2:30302212-30302231 Msa0767300:intron 40.0%
AAGAGGTTATACCCGAATGT+CGG - chr5_2:30302395-30302414 Msa0767300:intron 40.0%
CTTTAGGTAATCCTATAGGG+TGG - chr5_2:30302466-30302485 Msa0767300:intron 40.0%
! TTTTTACCTTCCCACCCTAT+AGG + chr5_2:30302480-30302499 None:intergenic 40.0%
CTCCCATCAATATTCTAAGC+TGG - chr5_2:30302544-30302563 Msa0767300:intron 40.0%
TTTGTTTGCTCGGTCAATTC+CGG + chr5_2:30302740-30302759 None:intergenic 40.0%
ATAACTTGAGTGCTAAGTGG+AGG - chr5_2:30302774-30302793 Msa0767300:intron 40.0%
AAACAAGACCGAGGAAGAAA+TGG - chr5_2:30302835-30302854 Msa0767300:intron 40.0%
AACTCTTCTATCAGGGATGT+AGG + chr5_2:30302864-30302883 None:intergenic 40.0%
GAAGGATCAACTCTTCTATC+AGG + chr5_2:30302872-30302891 None:intergenic 40.0%
! AGTACATCATTGGTGTTCCA+AGG - chr5_2:30302907-30302926 Msa0767300:CDS 40.0%
AAGGAATCGCTCAAAATACG+AGG - chr5_2:30303036-30303055 Msa0767300:intron 40.0%
AATGAACCTTGGAAGACTCT+TGG + chr5_2:30303080-30303099 None:intergenic 40.0%
TGTTAGACAACTGAGGCTAA+TGG - chr5_2:30303486-30303505 Msa0767300:intron 40.0%
TGGCAGTATTGTGAATGAGA+AGG - chr5_2:30303560-30303579 Msa0767300:intron 40.0%
GACGTATACTCAAGAGTAAG+AGG - chr5_2:30303790-30303809 Msa0767300:intron 40.0%
GTACAGATCCTTTCCTTTCA+GGG + chr5_2:30303816-30303835 None:intergenic 40.0%
AAAGGATCTGTACGTTGTCT+TGG - chr5_2:30303823-30303842 Msa0767300:intron 40.0%
TTTGCAAGCTATAGCTCAAG+AGG - chr5_2:30303984-30304003 Msa0767300:intron 40.0%
!! TTAGGAGTACTTGGAGCATT+AGG + chr5_2:30304090-30304109 None:intergenic 40.0%
! CAATCACTGTCACTTGTAGT+TGG + chr5_2:30304135-30304154 None:intergenic 40.0%
CAACTACAAGTGACAGTGAT+TGG - chr5_2:30304133-30304152 Msa0767300:intron 40.0%
TAGGGAAAAGCTAAGAGAAC+GGG + chr5_2:30304270-30304289 None:intergenic 40.0%
TCAAGCAATGAGGTTGTAAC+TGG - chr5_2:30304373-30304392 Msa0767300:intron 40.0%
GGCAGTTAAAATTTGCAGCA+CGG + chr5_2:30304441-30304460 None:intergenic 40.0%
AAACCTATTTCACCGAACAC+TGG + chr5_2:30304462-30304481 None:intergenic 40.0%
!! AAGGTTTTGATATAGGGGCA+TGG - chr5_2:30304524-30304543 Msa0767300:intron 40.0%
ATTTGTATGTCGGCCCTATT+TGG - chr5_2:30304579-30304598 Msa0767300:intron 40.0%
CCAAGTACTTCCTCCAAATA+GGG + chr5_2:30304595-30304614 None:intergenic 40.0%
ACCAAGTACTTCCTCCAAAT+AGG + chr5_2:30304596-30304615 None:intergenic 40.0%
AAGCCACCCTCATGTATATA+AGG + chr5_2:30304687-30304706 None:intergenic 40.0%
CGGTCTACACTTAATACTGA+TGG - chr5_2:30304733-30304752 Msa0767300:five_prime_UTR 40.0%
GGAAAACCTGAAGTATGTCG+CGG + chr5_2:30297031-30297050 None:intergenic 45.0%
ACAGCGTAAATGGGGAATCA+CGG + chr5_2:30297172-30297191 None:intergenic 45.0%
! AGAATACGAGGTGTCTGAAC+TGG - chr5_2:30297728-30297747 Msa0767300:CDS 45.0%
! GAATACGAGGTGTCTGAACT+GGG - chr5_2:30297729-30297748 Msa0767300:CDS 45.0%
! TCTGAACTGGGCCATAGTTT+TGG - chr5_2:30297741-30297760 Msa0767300:CDS 45.0%
TCACAAATGGGGATTCTTCC+AGG + chr5_2:30297829-30297848 None:intergenic 45.0%
! AAGCTGGTTCTCTGTTGAGT+GGG + chr5_2:30298107-30298126 None:intergenic 45.0%
TGCACAATTTGAAGGAGGTG+TGG - chr5_2:30298578-30298597 Msa0767300:intron 45.0%
GTGGAAAAGACACTTGTGCA+TGG + chr5_2:30299540-30299559 None:intergenic 45.0%
! GCGACTTTTTGATCCAATGG+TGG + chr5_2:30299559-30299578 None:intergenic 45.0%
! CACAAGCTAGTTTCCACCAT+TGG + chr5_2:30299620-30299639 None:intergenic 45.0%
AAACTTTATGCGCCTCCCTA+CGG + chr5_2:30299762-30299781 None:intergenic 45.0%
! AAAAAGTGTGCGCAACTTGG+AGG - chr5_2:30299872-30299891 Msa0767300:intron 45.0%
! CAATCTTTTGTACCTCCCCA+TGG + chr5_2:30300276-30300295 None:intergenic 45.0%
! GAAAAGTGTGCACAATCTGG+AGG - chr5_2:30300386-30300405 Msa0767300:intron 45.0%
AGTACAAGTGGGAAGTCATG+TGG - chr5_2:30300553-30300572 Msa0767300:CDS 45.0%
!! GAGTGTGACCAATTTGTTGG+AGG - chr5_2:30301223-30301242 Msa0767300:intron 45.0%
!! AGATTAGGACTTGCTACCAC+TGG + chr5_2:30302174-30302193 None:intergenic 45.0%
TTAGGTCAGAAGAGGGTAAG+AGG - chr5_2:30302378-30302397 Msa0767300:intron 45.0%
ATTCCACACATCCGACATTC+GGG + chr5_2:30302409-30302428 None:intergenic 45.0%
GATTCCACACATCCGACATT+CGG + chr5_2:30302410-30302429 None:intergenic 45.0%
GATGTGTGGAATCTACCAGA+TGG - chr5_2:30302417-30302436 Msa0767300:intron 45.0%
TTTAAATGCACTGGGCTGCT+TGG - chr5_2:30302503-30302522 Msa0767300:intron 45.0%
! ACATCATTGGTGTTCCAAGG+AGG - chr5_2:30302910-30302929 Msa0767300:CDS 45.0%
! CATCATTGGTGTTCCAAGGA+GGG - chr5_2:30302911-30302930 Msa0767300:CDS 45.0%
TCTTCCAAGGTTCATTCACG+AGG - chr5_2:30303084-30303103 Msa0767300:intron 45.0%
! AAGGCTTGGTTGTTGTTGAC+AGG + chr5_2:30303140-30303159 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr5_2:30303152-30303171 Msa0767300:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr5_2:30303153-30303172 Msa0767300:CDS 45.0%
GAGACTCGTACTCGTAAAGA+TGG - chr5_2:30303540-30303559 Msa0767300:intron 45.0%
CGTACAGATCCTTTCCTTTC+AGG + chr5_2:30303817-30303836 None:intergenic 45.0%
ATCTGTACGTTGTCTTGGCA+AGG - chr5_2:30303828-30303847 Msa0767300:intron 45.0%
AAGGTTCCACGTCATTCAAG+TGG - chr5_2:30303847-30303866 Msa0767300:intron 45.0%
GATGAACCACTTGAATGACG+TGG + chr5_2:30303856-30303875 None:intergenic 45.0%
!! GTTTTGATATAGGGGCATGG+TGG - chr5_2:30304527-30304546 Msa0767300:intron 45.0%
!! CCCTATTTGGAGGAAGTACT+TGG - chr5_2:30304592-30304611 Msa0767300:intron 45.0%
! GAGCCTTATATACATGAGGG+TGG - chr5_2:30304681-30304700 Msa0767300:five_prime_UTR 45.0%
!! ATTTATAAAAATTTATTGTT+TGG - chr5_2:30297359-30297378 Msa0767300:intron 5.0%
!! ATAAAAAATTGAAAATAAAA+AGG + chr5_2:30298654-30298673 None:intergenic 5.0%
!!! ATTTTTTAATTTTTTACAAT+TGG + chr5_2:30300233-30300252 None:intergenic 5.0%
!! AGATAAAAAAAAAAAAATTA+TGG + chr5_2:30301032-30301051 None:intergenic 5.0%
!! TGTTTCTAGTGACGGTTGGG+CGG + chr5_2:30296953-30296972 None:intergenic 50.0%
ATCTGCTGTGACGCAAATCG+AGG + chr5_2:30297132-30297151 None:intergenic 50.0%
GTAAATGGGGAATCACGGTG+CGG + chr5_2:30297167-30297186 None:intergenic 50.0%
! GAAGCTGGTTCTCTGTTGAG+TGG + chr5_2:30298108-30298127 None:intergenic 50.0%
TTGTAGCTGCACAGAGAAGC+TGG + chr5_2:30298123-30298142 None:intergenic 50.0%
ATACCATGGTGAAGCGCAGA+AGG - chr5_2:30298451-30298470 Msa0767300:intron 50.0%
GTAGAGTGTGCACATTGTGG+AGG - chr5_2:30299184-30299203 Msa0767300:CDS 50.0%
AAGTGTGCACAATCTGGAGG+AGG - chr5_2:30300389-30300408 Msa0767300:intron 50.0%
! CGGCCTTTTGTTCCTCTCAT+TGG + chr5_2:30301110-30301129 None:intergenic 50.0%
ATACCCGAATGTCGGATGTG+TGG - chr5_2:30302403-30302422 Msa0767300:intron 50.0%
GGTAATCCTATAGGGTGGGA+AGG - chr5_2:30302471-30302490 Msa0767300:intron 50.0%
GTAGGCAGCCATTTCTTCCT+CGG + chr5_2:30302846-30302865 None:intergenic 50.0%
! TTGGTGTTCCAAGGAGGGAA+AGG - chr5_2:30302916-30302935 Msa0767300:CDS 50.0%
GAGATGTACCTTTCCCTCCT+TGG + chr5_2:30302927-30302946 None:intergenic 50.0%
TGGGAACCAAGAGTCTTCCA+AGG - chr5_2:30303071-30303090 Msa0767300:intron 50.0%
TCCAAGGTTCATTCACGAGG+TGG - chr5_2:30303087-30303106 Msa0767300:intron 50.0%
ACCACCTCGTGAATGAACCT+TGG + chr5_2:30303091-30303110 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr5_2:30303154-30303173 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr5_2:30303151-30303170 Msa0767300:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr5_2:30303157-30303176 Msa0767300:CDS 50.0%
CAAGAGTAAGAGGCCCTGAA+AGG - chr5_2:30303800-30303819 Msa0767300:intron 50.0%
GTAAGAGGCCCTGAAAGGAA+AGG - chr5_2:30303805-30303824 Msa0767300:intron 50.0%
! CTGCCAGTGTTCGGTGAAAT+AGG - chr5_2:30304456-30304475 Msa0767300:intron 50.0%
TGTATGTCGGCCCTATTTGG+AGG - chr5_2:30304582-30304601 Msa0767300:intron 50.0%
!! GTTGGGCGGGGATGTCATTT+TGG + chr5_2:30296939-30296958 None:intergenic 55.0%
! TTTCTAGTGACGGTTGGGCG+GGG + chr5_2:30296951-30296970 None:intergenic 55.0%
!! GTTTCTAGTGACGGTTGGGC+GGG + chr5_2:30296952-30296971 None:intergenic 55.0%
GTAAGGCCGCGACATACTTC+AGG - chr5_2:30297022-30297041 Msa0767300:intron 55.0%
CTCGCGCGTGCACTAAAAGA+GGG + chr5_2:30297097-30297116 None:intergenic 55.0%
TGCTGTGACGCAAATCGAGG+TGG + chr5_2:30297129-30297148 None:intergenic 55.0%
CAACCTTCTGCGCTTCACCA+TGG + chr5_2:30298457-30298476 None:intergenic 55.0%
! ATACTCTGGAGAGGCGCACA+AGG - chr5_2:30299069-30299088 Msa0767300:intron 55.0%
GAGTGTGCACATTGTGGAGG+AGG - chr5_2:30299187-30299206 Msa0767300:CDS 55.0%
AGGGCAACTCTATGGTGCAC+AGG + chr5_2:30299664-30299683 None:intergenic 55.0%
AAGTGTGCGCAACTTGGAGG+AGG - chr5_2:30299875-30299894 Msa0767300:intron 55.0%
GTGTGTGTTTGGTTGTGCGG+TGG - chr5_2:30301297-30301316 Msa0767300:CDS 55.0%
ATGCACTGGGCTGCTTGGTA+AGG - chr5_2:30302508-30302527 Msa0767300:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr5_2:30303159-30303178 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr5_2:30303165-30303184 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr5_2:30303166-30303185 None:intergenic 55.0%
! GGGCATGGTGGTGATACATG+AGG - chr5_2:30304539-30304558 Msa0767300:intron 55.0%
CCTCGCGCGTGCACTAAAAG+AGG + chr5_2:30297098-30297117 None:intergenic 60.0%
! CCTCTTTTAGTGCACGCGCG+AGG - chr5_2:30297095-30297114 Msa0767300:three_prime_UTR 60.0%
TGGGGAATCACGGTGCGGCA+TGG + chr5_2:30297162-30297181 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 30296928 30304756 30296928 ID=Msa0767300;Name=Msa0767300
chr5_2 mRNA 30296928 30304756 30296928 ID=Msa0767300-mRNA-1;Parent=Msa0767300;Name=Msa0767300-mRNA-1;_AED=0.08;_eAED=0.08;_QI=121|0.87|1|1|0.81|0.70|17|229|711
chr5_2 exon 30296928 30297002 30296928 ID=Msa0767300-mRNA-1:exon:11434;Parent=Msa0767300-mRNA-1
chr5_2 exon 30297024 30297164 30297024 ID=Msa0767300-mRNA-1:exon:11433;Parent=Msa0767300-mRNA-1
chr5_2 exon 30297507 30297600 30297507 ID=Msa0767300-mRNA-1:exon:11432;Parent=Msa0767300-mRNA-1
chr5_2 exon 30297679 30297975 30297679 ID=Msa0767300-mRNA-1:exon:11431;Parent=Msa0767300-mRNA-1
chr5_2 exon 30298088 30298192 30298088 ID=Msa0767300-mRNA-1:exon:11430;Parent=Msa0767300-mRNA-1
chr5_2 exon 30298747 30298965 30298747 ID=Msa0767300-mRNA-1:exon:11429;Parent=Msa0767300-mRNA-1
chr5_2 exon 30299070 30299302 30299070 ID=Msa0767300-mRNA-1:exon:11428;Parent=Msa0767300-mRNA-1
chr5_2 exon 30299393 30299530 30299393 ID=Msa0767300-mRNA-1:exon:11427;Parent=Msa0767300-mRNA-1
chr5_2 exon 30300440 30300580 30300440 ID=Msa0767300-mRNA-1:exon:11426;Parent=Msa0767300-mRNA-1
chr5_2 exon 30301064 30301198 30301064 ID=Msa0767300-mRNA-1:exon:11425;Parent=Msa0767300-mRNA-1
chr5_2 exon 30301274 30301414 30301274 ID=Msa0767300-mRNA-1:exon:11424;Parent=Msa0767300-mRNA-1
chr5_2 exon 30301576 30301710 30301576 ID=Msa0767300-mRNA-1:exon:11423;Parent=Msa0767300-mRNA-1
chr5_2 exon 30301788 30301928 30301788 ID=Msa0767300-mRNA-1:exon:11422;Parent=Msa0767300-mRNA-1
chr5_2 exon 30302297 30302389 30302297 ID=Msa0767300-mRNA-1:exon:11421;Parent=Msa0767300-mRNA-1
chr5_2 exon 30302871 30303008 30302871 ID=Msa0767300-mRNA-1:exon:11420;Parent=Msa0767300-mRNA-1
chr5_2 exon 30303090 30303233 30303090 ID=Msa0767300-mRNA-1:exon:11419;Parent=Msa0767300-mRNA-1
chr5_2 exon 30304641 30304756 30304641 ID=Msa0767300-mRNA-1:exon:11418;Parent=Msa0767300-mRNA-1
chr5_2 five_prime_UTR 30304641 30304756 30304641 ID=Msa0767300-mRNA-1:five_prime_utr;Parent=Msa0767300-mRNA-1
chr5_2 five_prime_UTR 30303229 30303233 30303229 ID=Msa0767300-mRNA-1:five_prime_utr;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30303090 30303228 30303090 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30302871 30303008 30302871 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30302297 30302389 30302297 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30301788 30301928 30301788 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30301576 30301710 30301576 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30301274 30301414 30301274 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30301064 30301198 30301064 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30300440 30300580 30300440 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30299393 30299530 30299393 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30299070 30299302 30299070 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30298747 30298965 30298747 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30298088 30298192 30298088 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30297679 30297975 30297679 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 CDS 30297520 30297600 30297520 ID=Msa0767300-mRNA-1:cds;Parent=Msa0767300-mRNA-1
chr5_2 three_prime_UTR 30297507 30297519 30297507 ID=Msa0767300-mRNA-1:three_prime_utr;Parent=Msa0767300-mRNA-1
chr5_2 three_prime_UTR 30297024 30297164 30297024 ID=Msa0767300-mRNA-1:three_prime_utr;Parent=Msa0767300-mRNA-1
chr5_2 three_prime_UTR 30296928 30297002 30296928 ID=Msa0767300-mRNA-1:three_prime_utr;Parent=Msa0767300-mRNA-1
Gene Sequence

>Msa0767300

ATGGTGAAGCGCAGAAGGTTGAATGTTGTTCGAAAAAGTGGCAAATCACAGGCTAAAGAGAAACAGTTAATTTATAGCTCTGATGAAGTCAACCAAAACAAACACAGTAAAACAGAAGAGTTTGCACAATTTGAAGGAGTAAATACAAGAAAGAATCAAATGCTAGCTAGTCTGAATCACCAAAATGATGTACCACAATCAGAACAGCAAATACACGTGGGAAGTCATGTTGAATATCCTATTTCTTATGGTAGAATGGGTAAAAGTTTACCTAAAGGCACGAGAGAGAATTTAATGGTAGCAAGTCTGAGTCACCAAAATCATGAATCCCAATCAGAACAGCAAATACAAGTGGGAAGTTTACCTAAAGATACCGTAGGGAGGCGCATAAAGTTTAAAGCTGTTGGGAAAGGTGGCAAAGCACATGCTAAAGAGAAGTTAATTGATAGCTCTAATGTAGTCAACCAAAACGACCATCGTATAAACAAAAAGTGTGCGCAACTTGGAGGAGATACAAGAGAGAATTTAATGGTAGCAAGTCCATGTCACCAAAATCATGAATCACAATCAGAACAGCAAATACAAGTGGGACGTCGTGCTGAATATCCTATTTCTTTTGGTAGAATAGGTCAAAGTCTACCGAAAGATACCATGGGGAGGTACAAAAGATTGAATGCTGTTAGAAAAAGTGGCAAAGCACAGGCTGAAGACCAATTAATTGATAGCTCTAAGGCAGTCAACCAAAATAACTACAATATAAGTGAAAAGTGTGCACAATCTGGAGGAGTATCTACAAGAAGGAGCCTAATGGTAGCAAGTCTTAACCACCAAAATGGCCAATCACAATCAGAACAAGTACAAGTGGGAAGTCATGTGGAATCTCCTACTTCATTTGGTAGAATGAGTAAAAGATTACTTAAAGATACCAATGAGAGGAACAAAAGGCCGAATGTTGTTCGAAAAAGTGGGAGACTACAAGCTGAAAAGCAATTAATTGATAGCTCTATTGAAGTCAACCAAAACAACCACAATATAAATGAAGAGTGTGACCAATTTGTTGGAGTAGATACAAGAGGAAATCCAGTGGTAGCAAGTCCTAATCTCCAAAGTGACCAATCACAATCAGAGCAACAAATACCAGTGGAAAATCATGTTGAAACTCCTAATTCTGTTAGTAGAATGAGTAAAAGTTTAACTAAAGGTCAGAAGAGGGTAAGAGGTTATACCCGAATGTCGGATGTGTGGAATCTACCAGATGGAGAATTCATATGTGTTGAAGTGGATACTTTAGGTAATCCTATAGGGTGGGAAGGTAAAAAACTTTTAAATGCACTGGGCTGCTTGGTAAGGAAGCACGAATATGCTCCCATCAATATTCTAAGCTGGAAAGACATGCCAGAGTTGAACATAACTAATATGTTTGAGTGGATACAGAGTAAGTTTCACTTTGTTCCGGAATTGACCGAGCAAACAAAGCAAATACTAAAAGATAACTTGAGTGCTAAGTGGAGGCAATTCAAACATGACTTGAAAGCAAAGGGATATGATGAAAACAAGACCGAGGAAGAAATGGCTGCCTACATCCCTGATAGAAGAGTTGATCCTTCTCAATATCGTGCTTTAGTACATCATTGGTGTTCCAAGGAGGGAAAGACAACTGAGGCTAATGGAGCACAACCTTCACGAGCTGAAATTTATATTGAGACTCGTACTCGTAAAGATGGCAGTATTGTGAATGAGAAGGCAGCTAATGTGATTGGTGAATTAAAAAAGCATATGGTGGAGGCAACAAGTTCACGAACTCCTCAAAAGACTCAAGATTCTACAAATTGGGAGAATGACGTATACTCAAGAGTAAGAGGCCCTGAAAGGAAAGGATCTGTACGTTGTCTTGGCAAGGTTCCACGTCATTCAAGTGGTTCATCTCGAAGATCTAATGTTGAAAATAGGGTCCACAAATTAGAAAATTTGCTTGGGAATCTTGTTTCTGTTCTTCAAACACGATTTTCAGCAGACGAACAAATTAATGATGTTTTGCAAGCTATAGCTCAAGAGGTACCTAATGCTCCAAGTACTCCTAATGATTTCTCTAGTAAGGATCAGCCAACTACAAGTGACAGTGATTGGGAAAATTGA

Protein sequence

>Msa0767300

MVKRRRLNVVRKSGKSQAKEKQLIYSSDEVNQNKHSKTEEFAQFEGVNTRKNQMLASLNHQNDVPQSEQQIHVGSHVEYPISYGRMGKSLPKGTRENLMVASLSHQNHESQSEQQIQVGSLPKDTVGRRIKFKAVGKGGKAHAKEKLIDSSNVVNQNDHRINKKCAQLGGDTRENLMVASPCHQNHESQSEQQIQVGRRAEYPISFGRIGQSLPKDTMGRYKRLNAVRKSGKAQAEDQLIDSSKAVNQNNYNISEKCAQSGGVSTRRSLMVASLNHQNGQSQSEQVQVGSHVESPTSFGRMSKRLLKDTNERNKRPNVVRKSGRLQAEKQLIDSSIEVNQNNHNINEECDQFVGVDTRGNPVVASPNLQSDQSQSEQQIPVENHVETPNSVSRMSKSLTKGQKRVRGYTRMSDVWNLPDGEFICVEVDTLGNPIGWEGKKLLNALGCLVRKHEYAPINILSWKDMPELNITNMFEWIQSKFHFVPELTEQTKQILKDNLSAKWRQFKHDLKAKGYDENKTEEEMAAYIPDRRVDPSQYRALVHHWCSKEGKTTEANGAQPSRAEIYIETRTRKDGSIVNEKAANVIGELKKHMVEATSSRTPQKTQDSTNWENDVYSRVRGPERKGSVRCLGKVPRHSSGSSRRSNVENRVHKLENLLGNLVSVLQTRFSADEQINDVLQAIAQEVPNAPSTPNDFSSKDQPTTSDSDWEN*