Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040540 | XP_003626081.1 | 82.284 | 429 | 21 | 3 | 1 | 374 | 1 | 429 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040540 | G7KUN7 | 82.284 | 429 | 21 | 3 | 1 | 374 | 1 | 429 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1040540 | 0.810273 | 1.250956e-50 | -8.615850e-47 |
| Msa0009180 | Msa1040540 | 0.803082 | 4.131550e-49 | -8.615850e-47 |
| Msa0625720 | Msa1040540 | 0.824338 | 8.522888e-54 | -8.615850e-47 |
| Msa0661650 | Msa1040540 | 0.818285 | 2.122750e-52 | -8.615850e-47 |
| Msa0663390 | Msa1040540 | 0.801856 | 7.392013e-49 | -8.615850e-47 |
| Msa0681270 | Msa1040540 | 0.801752 | 7.764286e-49 | -8.615850e-47 |
| Msa0707250 | Msa1040540 | 0.802778 | 4.774031e-49 | -8.615850e-47 |
| Msa0715700 | Msa1040540 | 0.807351 | 5.272861e-50 | -8.615850e-47 |
| Msa0832340 | Msa1040540 | 0.802808 | 4.705463e-49 | -8.615850e-47 |
| Msa0206010 | Msa1040540 | 0.803556 | 3.295346e-49 | -8.615850e-47 |
| Msa0389910 | Msa1040540 | 0.805168 | 1.520259e-49 | -8.615850e-47 |
| Msa0455760 | Msa1040540 | 0.832040 | 1.186195e-55 | -8.615850e-47 |
| Msa0999220 | Msa1040540 | 0.807525 | 4.844427e-50 | -8.615850e-47 |
| Msa1040540 | Msa1193290 | 0.802156 | 6.413477e-49 | -8.615850e-47 |
| Msa1040540 | Msa1427230 | 0.807268 | 5.492332e-50 | -8.615850e-47 |
| Msa1040540 | Msa1466540 | 0.809864 | 1.532750e-50 | -8.615850e-47 |
| Msa0260780 | Msa1040540 | 0.805102 | 1.569971e-49 | -8.615850e-47 |
| Msa0326110 | Msa1040540 | 0.805788 | 1.127032e-49 | -8.615850e-47 |
| Msa0363790 | Msa1040540 | 0.815029 | 1.139899e-51 | -8.615850e-47 |
| Msa0529890 | Msa1040540 | 0.824547 | 7.607375e-54 | -8.615850e-47 |
| Msa0585560 | Msa1040540 | 0.805973 | 1.030723e-49 | -8.615850e-47 |
| Msa0901930 | Msa1040540 | 0.803497 | 3.389644e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040540 | MtrunA17_Chr7g0270881 | 82.284 | 429 | 21 | 3 | 1 | 374 | 1 | 429 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1040540 | AT3G62080.1 | 51.312 | 343 | 111 | 2 | 5 | 291 | 6 | 348 | 1.89e-118 | 350 |
| Msa1040540 | AT3G62080.2 | 51.312 | 343 | 111 | 2 | 5 | 291 | 45 | 387 | 6.72e-118 | 350 |
Find 97 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTCAATATTATTTAAAT+TGG | 0.082565 | 7_1:-77922511 | None:intergenic |
| TTTGTTAACTCATTGTAATT+AGG | 0.185814 | 7_1:+77927469 | Msa1040540:three_prime_UTR |
| ATTTCTCCAGAAAATGAAAT+TGG | 0.195539 | 7_1:-77922686 | None:intergenic |
| TTGTTAACTCATTGTAATTA+GGG | 0.240114 | 7_1:+77927470 | Msa1040540:three_prime_UTR |
| TTATGAGGAGAAAATGAAAA+TGG | 0.255298 | 7_1:-77922729 | None:intergenic |
| AGGTCCTTTGAGCACACTTT+TGG | 0.261254 | 7_1:+77927535 | Msa1040540:three_prime_UTR |
| AAGAGAAGAAAAGGGGAAAA+TGG | 0.265624 | 7_1:+77922555 | Msa1040540:exon |
| CTGAGCCGTGGAAGCACCTT+GGG | 0.290935 | 7_1:-77927514 | None:intergenic |
| CTCTCAGCAGCAGCATTATC+TGG | 0.321416 | 7_1:+77925874 | Msa1040540:CDS |
| GCAGTGGCTTCTCTACATTC+TGG | 0.347417 | 7_1:+77926598 | Msa1040540:CDS |
| CAAAGAGCAAAGAGAAGAAA+AGG | 0.349207 | 7_1:+77922546 | Msa1040540:five_prime_UTR |
| TGAAGAAGGAACTGCAACTT+TGG | 0.366943 | 7_1:+77927191 | Msa1040540:CDS |
| CATTACGATGAAGAAATTTC+AGG | 0.370723 | 7_1:+77925460 | Msa1040540:CDS |
| AGAACCACTCATGCGGCATC+TGG | 0.378909 | 7_1:+77927282 | Msa1040540:CDS |
| TTTCTTCATCGTAATGATAC+AGG | 0.382998 | 7_1:-77925453 | None:intergenic |
| TTCTCTCACTTTCAGACTTA+CGG | 0.391970 | 7_1:-77927337 | None:intergenic |
| GTGATGTTCTGTACTTGATT+TGG | 0.400685 | 7_1:+77925914 | Msa1040540:CDS |
| TCTTCAATATTATTTAAATT+GGG | 0.411886 | 7_1:-77922510 | None:intergenic |
| CCTCTACAAATTCATTCTTA+AGG | 0.414112 | 7_1:-77925562 | None:intergenic |
| TCTCCTCATAAAACCTTCTC+AGG | 0.418140 | 7_1:+77922741 | Msa1040540:CDS |
| TCTGCGAATCAATGCTCTCT+TGG | 0.434409 | 7_1:-77926930 | None:intergenic |
| GATAACTTCGTCGTTCCAAT+CGG | 0.436175 | 7_1:-77922614 | None:intergenic |
| TTTCTCCAGAAAATGAAATT+GGG | 0.437602 | 7_1:-77922685 | None:intergenic |
| TATGAGGAGAAAATGAAAAT+GGG | 0.446251 | 7_1:-77922728 | None:intergenic |
| CAGTGGCTTCTCTACATTCT+GGG | 0.449968 | 7_1:+77926599 | Msa1040540:CDS |
| AAAGAGCAAAGAGAAGAAAA+GGG | 0.451481 | 7_1:+77922547 | Msa1040540:five_prime_UTR |
| GTTTCTGAAGCTATGCAGAT+TGG | 0.453095 | 7_1:+77926844 | Msa1040540:CDS |
| AACAATTAGATGTGATTGAC+AGG | 0.458580 | 7_1:+77925956 | Msa1040540:CDS |
| CCAAGGTGCTTCCACGGCTC+AGG | 0.467021 | 7_1:+77927515 | Msa1040540:three_prime_UTR |
| GGTTTACATTGCTAAATTTG+CGG | 0.468527 | 7_1:-77927316 | None:intergenic |
| TCAATATTATTTAAATTGGG+TGG | 0.478586 | 7_1:-77922507 | None:intergenic |
| GCACCTTGGGGTGCCAAATG+AGG | 0.492611 | 7_1:-77927501 | None:intergenic |
| TTCGCAGAAGGAAGTTGAAA+AGG | 0.493419 | 7_1:+77926945 | Msa1040540:CDS |
| AACATCTATCAGAAAGTCAC+TGG | 0.493712 | 7_1:+77925423 | Msa1040540:CDS |
| AACTTTCAGACCGTCCAGTC+GGG | 0.495099 | 7_1:+77927253 | Msa1040540:CDS |
| GGCACCCCAAGGTGCTTCCA+CGG | 0.496578 | 7_1:+77927509 | Msa1040540:three_prime_UTR |
| AATGAAATTGGGTTGCCAAT+CGG | 0.497801 | 7_1:-77922674 | None:intergenic |
| GTAATGTTGAGGTATCTGTC+AGG | 0.502229 | 7_1:+77925512 | Msa1040540:CDS |
| CAATATTATTTAAATTGGGT+GGG | 0.503105 | 7_1:-77922506 | None:intergenic |
| TTTGTGTATCGACGATGTAC+TGG | 0.503242 | 7_1:+77922889 | Msa1040540:CDS |
| AGTTGCAGTTCCTTCTTCAC+TGG | 0.503366 | 7_1:-77927187 | None:intergenic |
| ATAACTTCGTCGTTCCAATC+GGG | 0.505272 | 7_1:-77922613 | None:intergenic |
| CCTGAGCCGTGGAAGCACCT+TGG | 0.507046 | 7_1:-77927515 | None:intergenic |
| TTGCCAATCGGATCTTTGAC+CGG | 0.507149 | 7_1:-77922662 | None:intergenic |
| AGAGCTGGCTCTTGAGAAAG+AGG | 0.509308 | 7_1:+77927134 | Msa1040540:CDS |
| CTAATTATCGAGTCTCTAGT+AGG | 0.511665 | 7_1:+77927560 | Msa1040540:three_prime_UTR |
| AAGAAATTTCAGGAGATATG+TGG | 0.514245 | 7_1:+77925470 | Msa1040540:CDS |
| GTACATCGTCGATACACAAA+GGG | 0.517215 | 7_1:-77922886 | None:intergenic |
| AAGACTACTACCAGTGAAGA+AGG | 0.526492 | 7_1:+77927177 | Msa1040540:CDS |
| AACATTACAGAAGCTTCATC+CGG | 0.530777 | 7_1:-77925497 | None:intergenic |
| TTCTTGACTTCCCGACTGGA+CGG | 0.535316 | 7_1:-77927263 | None:intergenic |
| AGCTATGCAGATTGGAGCAC+GGG | 0.538575 | 7_1:+77926852 | Msa1040540:CDS |
| AACCCTCATTTGGCACCCCA+AGG | 0.539468 | 7_1:+77927498 | Msa1040540:three_prime_UTR |
| GTGGTTCTTGACTTCCCGAC+TGG | 0.540242 | 7_1:-77927267 | None:intergenic |
| CACCTTGGGGTGCCAAATGA+GGG | 0.540899 | 7_1:-77927500 | None:intergenic |
| AAGGAAGTTGAAAAGGCTCT+AGG | 0.544756 | 7_1:+77926952 | Msa1040540:CDS |
| GTATGCAAGGGAGCTGAAGT+TGG | 0.544956 | 7_1:+77926642 | Msa1040540:CDS |
| TCAGGAGATATGTGGAGGGC+CGG | 0.546577 | 7_1:+77925478 | Msa1040540:CDS |
| GGAACAGAAAATTAGCCCTC+AGG | 0.547297 | 7_1:+77926620 | Msa1040540:CDS |
| TGTAAAAGATTTCATAGCAA+AGG | 0.558892 | 7_1:+77922585 | Msa1040540:CDS |
| TGATGCAGAGTCAACGAAAA+CGG | 0.560271 | 7_1:+77926732 | Msa1040540:CDS |
| AGAACTCGACTTTGAATGGA+GGG | 0.569869 | 7_1:-77927636 | None:intergenic |
| TAGCAAAGGAAGTTCCCGAT+TGG | 0.572493 | 7_1:+77922599 | Msa1040540:CDS |
| TTTCCGGTCAAAGATCCGAT+TGG | 0.575498 | 7_1:+77922659 | Msa1040540:CDS |
| AATTAGCCCTCAGGTATGCA+AGG | 0.576840 | 7_1:+77926629 | Msa1040540:CDS |
| TGCTCAAAGGACCTGAGCCG+TGG | 0.588717 | 7_1:-77927526 | None:intergenic |
| CTAGTAGGTAGTACCTGAGA+AGG | 0.589294 | 7_1:-77922754 | None:intergenic |
| AATGATTGGTTTAATCGAGG+AGG | 0.590003 | 7_1:+77922857 | Msa1040540:CDS |
| CGAACTTGAAGAGTTAGAGC+TGG | 0.590091 | 7_1:+77927119 | Msa1040540:CDS |
| AAGAGCAAAGAGAAGAAAAG+GGG | 0.595766 | 7_1:+77922548 | Msa1040540:five_prime_UTR |
| AAGCTATGCAGATTGGAGCA+CGG | 0.597275 | 7_1:+77926851 | Msa1040540:CDS |
| TTGAGGTATCTGTCAGGGTG+TGG | 0.599641 | 7_1:+77925518 | Msa1040540:CDS |
| TCGTTGATATCTGTGTATGA+TGG | 0.601282 | 7_1:-77927081 | None:intergenic |
| CAAAGAAAATAAGATAAGCG+TGG | 0.607783 | 7_1:+77926879 | Msa1040540:CDS |
| TGCTCCAGATGCCGCATGAG+TGG | 0.609145 | 7_1:-77927286 | None:intergenic |
| AAACTTTCAGACCGTCCAGT+CGG | 0.612549 | 7_1:+77927252 | Msa1040540:CDS |
| GAGGGAGACGCTCATTTGAG+AGG | 0.617408 | 7_1:-77927618 | None:intergenic |
| AAGAACTCGACTTTGAATGG+AGG | 0.618714 | 7_1:-77927637 | None:intergenic |
| TAATGTTGAGGTATCTGTCA+GGG | 0.619571 | 7_1:+77925513 | Msa1040540:CDS |
| ATGAAGCTTCTGTAATGTTG+AGG | 0.620445 | 7_1:+77925501 | Msa1040540:CDS |
| AGTCCCAAAAGTGTGCTCAA+AGG | 0.620636 | 7_1:-77927539 | None:intergenic |
| AGAGAGCATTGATTCGCAGA+AGG | 0.621110 | 7_1:+77926933 | Msa1040540:CDS |
| CCTTAAGAATGAATTTGTAG+AGG | 0.621270 | 7_1:+77925562 | Msa1040540:CDS |
| TCAGCTCCCTTGCATACCTG+AGG | 0.625490 | 7_1:-77926636 | None:intergenic |
| CAGCTCCCTTGCATACCTGA+GGG | 0.632956 | 7_1:-77926635 | None:intergenic |
| AAATTTCAGGAGATATGTGG+AGG | 0.635846 | 7_1:+77925473 | Msa1040540:CDS |
| AGTACATCGTCGATACACAA+AGG | 0.640214 | 7_1:-77922887 | None:intergenic |
| AGAGGCTCAAGTTGATACAC+CGG | 0.640753 | 7_1:+77927152 | Msa1040540:CDS |
| AAAAGCTTTGAATCGAGCAA+CGG | 0.643739 | 7_1:-77922638 | None:intergenic |
| AATAGAGTAGAGGAAGTACA+TGG | 0.652329 | 7_1:+77926700 | Msa1040540:CDS |
| GAAGTCAAGAACCACTCATG+CGG | 0.652468 | 7_1:+77927275 | Msa1040540:CDS |
| ATTAGCCCTCAGGTATGCAA+GGG | 0.658310 | 7_1:+77926630 | Msa1040540:CDS |
| TAGGTCAAGAAAATCAGCAG+TGG | 0.659396 | 7_1:+77926582 | Msa1040540:intron |
| TGAGCCGTGGAAGCACCTTG+GGG | 0.664588 | 7_1:-77927513 | None:intergenic |
| TGGAACAGCACAGTATCTGT+CGG | 0.667033 | 7_1:+77925538 | Msa1040540:CDS |
| AATTTCAGGAGATATGTGGA+GGG | 0.688878 | 7_1:+77925474 | Msa1040540:CDS |
| TACATCGTCGATACACAAAG+GGG | 0.757838 | 7_1:-77922885 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATAAATTTTTAAATT+TGG | + | chr7_1:77924954-77924973 | Msa1040540:intron | 0.0% |
| !! | TCTTCAATATTATTTAAATT+GGG | - | chr7_1:77922513-77922532 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACAAATTTG+AGG | - | chr7_1:77922824-77922843 | None:intergenic | 10.0% |
| !! | ATAGTAATAATTAGAAAAAA+TGG | - | chr7_1:77924103-77924122 | None:intergenic | 10.0% |
| !!! | AGTTTTTTTTCTATAAAATT+AGG | + | chr7_1:77924896-77924915 | Msa1040540:intron | 10.0% |
| !!! | TATAAATTTTTAAATTTGGT+AGG | + | chr7_1:77924958-77924977 | Msa1040540:intron | 10.0% |
| !! | CATCTAAAAAAAAATTTATA+TGG | + | chr7_1:77927584-77927603 | Msa1040540:three_prime_UTR | 10.0% |
| !! | TCTAAAAAAAAATTTATATG+GGG | + | chr7_1:77927586-77927605 | Msa1040540:three_prime_UTR | 10.0% |
| !! | GTCTTCAATATTATTTAAAT+TGG | - | chr7_1:77922514-77922533 | None:intergenic | 15.0% |
| !!! | TTTTTTAGGTTAAAAATGAT+TGG | + | chr7_1:77922843-77922862 | Msa1040540:intron | 15.0% |
| !!! | TTTTCTTTCTAAATTAAGAA+AGG | - | chr7_1:77923333-77923352 | None:intergenic | 15.0% |
| !! | TTTCTAATTATTACTATTGT+AGG | + | chr7_1:77924106-77924125 | Msa1040540:intron | 15.0% |
| !!! | TCTAAATATTGATAGTTATT+GGG | - | chr7_1:77924713-77924732 | None:intergenic | 15.0% |
| !!! | TACTTTTAAAAATTATTCTG+CGG | + | chr7_1:77925102-77925121 | Msa1040540:intron | 15.0% |
| !! | TTTATTATCTTATACATTTC+AGG | + | chr7_1:77925128-77925147 | Msa1040540:intron | 15.0% |
| !! | TAAAATATAATAATCTACTG+TGG | - | chr7_1:77926127-77926146 | None:intergenic | 15.0% |
| !! | ACAGAATATAATAAACTTAA+TGG | + | chr7_1:77926257-77926276 | Msa1040540:intron | 15.0% |
| !!! | CATGCATTTATTTATTTTTT+TGG | + | chr7_1:77927044-77927063 | Msa1040540:intron | 15.0% |
| !! | CTAAAAAAAAATTTATATGG+GGG | + | chr7_1:77927587-77927606 | Msa1040540:three_prime_UTR | 15.0% |
| !! | CAATATTATTTAAATTGGGT+GGG | - | chr7_1:77922509-77922528 | None:intergenic | 20.0% |
| !! | TCAATATTATTTAAATTGGG+TGG | - | chr7_1:77922510-77922529 | None:intergenic | 20.0% |
| !! | TGAAAATGAAAAGAAAAAGA+GGG | - | chr7_1:77922795-77922814 | None:intergenic | 20.0% |
| !! | ATGAAAATGAAAAGAAAAAG+AGG | - | chr7_1:77922796-77922815 | None:intergenic | 20.0% |
| !!! | TTTTTTAACAAGTTTAATGG+AGG | - | chr7_1:77923238-77923257 | None:intergenic | 20.0% |
| !!! | CAGTTTTTTAACAAGTTTAA+TGG | - | chr7_1:77923241-77923260 | None:intergenic | 20.0% |
| !! | CAAAAAATAAAACACGAAAA+GGG | - | chr7_1:77923390-77923409 | None:intergenic | 20.0% |
| !! | ACAAAAAATAAAACACGAAA+AGG | - | chr7_1:77923391-77923410 | None:intergenic | 20.0% |
| !! | AACAAAAACAAAAGAAGAAA+AGG | - | chr7_1:77923629-77923648 | None:intergenic | 20.0% |
| !! | ATTTACCAACATATATTTCA+TGG | + | chr7_1:77923719-77923738 | Msa1040540:intron | 20.0% |
| !! | TCAAAATTGACCAATTATTT+GGG | - | chr7_1:77923999-77924018 | None:intergenic | 20.0% |
| !! | TTCAAAATTGACCAATTATT+TGG | - | chr7_1:77924000-77924019 | None:intergenic | 20.0% |
| !!! | TCATAGTTTGGAATTATAAT+AGG | - | chr7_1:77924030-77924049 | None:intergenic | 20.0% |
| !! | GTTTCAAGAATAATATAAGA+GGG | - | chr7_1:77924646-77924665 | None:intergenic | 20.0% |
| !! | CTCTTATATTATTCTTGAAA+CGG | + | chr7_1:77924645-77924664 | Msa1040540:intron | 20.0% |
| !!! | GAAGATTTTCAATAATCAAT+GGG | - | chr7_1:77924691-77924710 | None:intergenic | 20.0% |
| !!! | CTCTAAATATTGATAGTTAT+TGG | - | chr7_1:77924714-77924733 | None:intergenic | 20.0% |
| !! | GTAAAGTTTCCAAAATTTAT+GGG | - | chr7_1:77924754-77924773 | None:intergenic | 20.0% |
| !! | CACATTAAAACAACTTAAAT+AGG | - | chr7_1:77924846-77924865 | None:intergenic | 20.0% |
| !!! | ACTTTTAAAAATTATTCTGC+GGG | + | chr7_1:77925103-77925122 | Msa1040540:intron | 20.0% |
| !! | TGTTTAGTATTCTATCATTT+AGG | + | chr7_1:77925630-77925649 | Msa1040540:intron | 20.0% |
| !! | TCTTCAAATATATCACATTT+AGG | + | chr7_1:77925663-77925682 | Msa1040540:intron | 20.0% |
| !!! | ATTTCCATTTTTAATTTGAC+AGG | + | chr7_1:77925837-77925856 | Msa1040540:intron | 20.0% |
| !!! | TTTCCATTTTTAATTTGACA+GGG | + | chr7_1:77925838-77925857 | Msa1040540:intron | 20.0% |
| !!! | ATTATATTTTATGTAAGTGC+CGG | + | chr7_1:77926136-77926155 | Msa1040540:intron | 20.0% |
| !! | AGTATAACATCATATGAATA+AGG | - | chr7_1:77926288-77926307 | None:intergenic | 20.0% |
| !! | CTAAATAGGATAAATATGTT+AGG | - | chr7_1:77926565-77926584 | None:intergenic | 20.0% |
| !! | CTAACATATTTATCCTATTT+AGG | + | chr7_1:77926563-77926582 | Msa1040540:intron | 20.0% |
| !!! | TTTTGCTGAAATCAATAATT+AGG | + | chr7_1:77927006-77927025 | Msa1040540:intron | 20.0% |
| !!! | AAACATATTTTAAGATCTTG+TGG | - | chr7_1:77927402-77927421 | None:intergenic | 20.0% |
| !! | TTTGTTAACTCATTGTAATT+AGG | + | chr7_1:77927469-77927488 | Msa1040540:three_prime_UTR | 20.0% |
| !! | TTGTTAACTCATTGTAATTA+GGG | + | chr7_1:77927470-77927489 | Msa1040540:three_prime_UTR | 20.0% |
| ! | TGTAAAAGATTTCATAGCAA+AGG | + | chr7_1:77922585-77922604 | Msa1040540:CDS | 25.0% |
| ! | TTTCTCCAGAAAATGAAATT+GGG | - | chr7_1:77922688-77922707 | None:intergenic | 25.0% |
| ! | ATTTCTCCAGAAAATGAAAT+TGG | - | chr7_1:77922689-77922708 | None:intergenic | 25.0% |
| ! | TATGAGGAGAAAATGAAAAT+GGG | - | chr7_1:77922731-77922750 | None:intergenic | 25.0% |
| ! | TTATGAGGAGAAAATGAAAA+TGG | - | chr7_1:77922732-77922751 | None:intergenic | 25.0% |
| ! | AAAAGAAAAAGAGGGAAAAT+TGG | - | chr7_1:77922787-77922806 | None:intergenic | 25.0% |
| !!! | AAAAATGATTGGTTTAATCG+AGG | + | chr7_1:77922854-77922873 | Msa1040540:CDS | 25.0% |
| ! | TAAAGCAAAGAAGTGAATTT+GGG | - | chr7_1:77923004-77923023 | None:intergenic | 25.0% |
| ! | ATAAAGCAAAGAAGTGAATT+TGG | - | chr7_1:77923005-77923024 | None:intergenic | 25.0% |
| ! | AATTCACTTCTTTGCTTTAT+AGG | + | chr7_1:77923005-77923024 | Msa1040540:intron | 25.0% |
| !! | AAACTACTAGTTTACACTAA+CGG | - | chr7_1:77923125-77923144 | None:intergenic | 25.0% |
| !! | TGTAAACTAGTAGTTTTTGT+TGG | + | chr7_1:77923129-77923148 | Msa1040540:intron | 25.0% |
| ! | TGTTGGAATCAACTATTTAA+CGG | + | chr7_1:77923146-77923165 | Msa1040540:intron | 25.0% |
| ! | TTGAATTGTCATTGAATGTT+CGG | + | chr7_1:77923184-77923203 | Msa1040540:intron | 25.0% |
| ! | GCATGCATAAAATAAACAAA+AGG | - | chr7_1:77923666-77923685 | None:intergenic | 25.0% |
| ! | ATTTCAAATGAACTCTACAA+GGG | - | chr7_1:77923754-77923773 | None:intergenic | 25.0% |
| ! | AATTTCAAATGAACTCTACA+AGG | - | chr7_1:77923755-77923774 | None:intergenic | 25.0% |
| !!! | GAGTTCATTTGAAATTTTCA+TGG | + | chr7_1:77923759-77923778 | Msa1040540:intron | 25.0% |
| !!! | TTCATTTGAAATTTTCATGG+AGG | + | chr7_1:77923762-77923781 | Msa1040540:intron | 25.0% |
| !! | TTGTTTGATAACTTGCAATT+TGG | + | chr7_1:77923856-77923875 | Msa1040540:intron | 25.0% |
| ! | CAAAATTGACCAATTATTTG+GGG | - | chr7_1:77923998-77924017 | None:intergenic | 25.0% |
| ! | GATTACAAAAAATGCGTTTA+GGG | - | chr7_1:77924601-77924620 | None:intergenic | 25.0% |
| ! | TGATTACAAAAAATGCGTTT+AGG | - | chr7_1:77924602-77924621 | None:intergenic | 25.0% |
| ! | CGTTTCAAGAATAATATAAG+AGG | - | chr7_1:77924647-77924666 | None:intergenic | 25.0% |
| !! | ATAATCAATGGGTTTAATGA+GGG | - | chr7_1:77924680-77924699 | None:intergenic | 25.0% |
| !! | AATAATCAATGGGTTTAATG+AGG | - | chr7_1:77924681-77924700 | None:intergenic | 25.0% |
| !! | GGAAGATTTTCAATAATCAA+TGG | - | chr7_1:77924692-77924711 | None:intergenic | 25.0% |
| ! | CAAAATTTATGGGTGTATAT+TGG | - | chr7_1:77924744-77924763 | None:intergenic | 25.0% |
| !! | CAATATACACCCATAAATTT+TGG | + | chr7_1:77924742-77924761 | Msa1040540:intron | 25.0% |
| ! | GGTAAAGTTTCCAAAATTTA+TGG | - | chr7_1:77924755-77924774 | None:intergenic | 25.0% |
| !! | TACATTTCAGGTATTTAAGT+TGG | + | chr7_1:77925140-77925159 | Msa1040540:intron | 25.0% |
| ! | TAGAATTGCTAAACAATTTG+AGG | - | chr7_1:77925171-77925190 | None:intergenic | 25.0% |
| !! | ATTTCTGTTTCTTCATATGT+AGG | + | chr7_1:77925379-77925398 | Msa1040540:intron | 25.0% |
| ! | ATGATAGAATACTAAACAAC+TGG | - | chr7_1:77925628-77925647 | None:intergenic | 25.0% |
| ! | CAAATAACTTCTAACATTTC+TGG | + | chr7_1:77925704-77925723 | Msa1040540:intron | 25.0% |
| !!! | TTCTAACATTTCTGGTAAAT+TGG | + | chr7_1:77925712-77925731 | Msa1040540:intron | 25.0% |
| ! | TACTTGTATATGTATCATGA+AGG | + | chr7_1:77926010-77926029 | Msa1040540:intron | 25.0% |
| !!! | AAGTCGTTTTAACACATAAA+AGG | + | chr7_1:77926186-77926205 | Msa1040540:intron | 25.0% |
| !!! | TGAGTAATTGTGTTTTGAAT+TGG | - | chr7_1:77926212-77926231 | None:intergenic | 25.0% |
| ! | TATCACCAAATCTTAATTAG+TGG | - | chr7_1:77926331-77926350 | None:intergenic | 25.0% |
| ! | TCAAATTGATCAGTTTACAT+TGG | + | chr7_1:77926774-77926793 | Msa1040540:intron | 25.0% |
| ! | AAAAAATTTATATGGGGGTT+AGG | + | chr7_1:77927592-77927611 | Msa1040540:three_prime_UTR | 25.0% |
| ATTGCTTTGACAAAAAGAGA+GGG | - | chr7_1:77922481-77922500 | None:intergenic | 30.0% | |
| AAAGAGCAAAGAGAAGAAAA+GGG | + | chr7_1:77922547-77922566 | Msa1040540:five_prime_UTR | 30.0% | |
| AAAATTGGAAAAACCCTAGT+AGG | - | chr7_1:77922772-77922791 | None:intergenic | 30.0% | |
| CAATTACATACATTTCATGC+TGG | + | chr7_1:77922961-77922980 | Msa1040540:intron | 30.0% | |
| ! | AGAGGACTAAGTCTATATTT+TGG | + | chr7_1:77923050-77923069 | Msa1040540:intron | 30.0% |
| TCAACTATTTAACGGTTATG+TGG | + | chr7_1:77923154-77923173 | Msa1040540:intron | 30.0% | |
| ! | GTAAAATAGTTCTACACTGA+CGG | + | chr7_1:77923208-77923227 | Msa1040540:intron | 30.0% |
| TAAAAAACTGACAGAATGAC+AGG | + | chr7_1:77923251-77923270 | Msa1040540:intron | 30.0% | |
| CTTCATTATACATTAGAGAC+TGG | - | chr7_1:77923433-77923452 | None:intergenic | 30.0% | |
| CAGTCTCTAATGTATAATGA+AGG | + | chr7_1:77923431-77923450 | Msa1040540:intron | 30.0% | |
| AGAAAAGGTCTCGAAATAAA+TGG | - | chr7_1:77923614-77923633 | None:intergenic | 30.0% | |
| !! | TTATTTTATGCATGCGTGTT+TGG | + | chr7_1:77923671-77923690 | Msa1040540:intron | 30.0% |
| ATCTGAATTACAAATGCACA+AGG | - | chr7_1:77923701-77923720 | None:intergenic | 30.0% | |
| ! | TTGAAATTTTCATGGAGGAA+TGG | + | chr7_1:77923767-77923786 | Msa1040540:intron | 30.0% |
| AACACGTAAGAATATTGACA+TGG | - | chr7_1:77923795-77923814 | None:intergenic | 30.0% | |
| TATCTGAAAGTTGTAGGTAA+GGG | - | chr7_1:77923945-77923964 | None:intergenic | 30.0% | |
| ACTTTCTATCTGAAAGTTGT+AGG | - | chr7_1:77923951-77923970 | None:intergenic | 30.0% | |
| !!! | CGCATTTTTTGTAATCAGAA+AGG | + | chr7_1:77924605-77924624 | Msa1040540:intron | 30.0% |
| TATGAATATGGGAATTGCAT+TGG | - | chr7_1:77924776-77924795 | None:intergenic | 30.0% | |
| GAGTTGAGTACTATGAATAT+GGG | - | chr7_1:77924787-77924806 | None:intergenic | 30.0% | |
| TTTAGCAATTCTACAGCATA+AGG | + | chr7_1:77925178-77925197 | Msa1040540:intron | 30.0% | |
| !! | TGCAAACTTAATTAACTTGC+TGG | - | chr7_1:77925286-77925305 | None:intergenic | 30.0% |
| TACTCAAACAAAGGAAAAGT+TGG | - | chr7_1:77925325-77925344 | None:intergenic | 30.0% | |
| TTTCTTCATCGTAATGATAC+AGG | - | chr7_1:77925456-77925475 | None:intergenic | 30.0% | |
| CATTACGATGAAGAAATTTC+AGG | + | chr7_1:77925460-77925479 | Msa1040540:CDS | 30.0% | |
| AAGAAATTTCAGGAGATATG+TGG | + | chr7_1:77925470-77925489 | Msa1040540:CDS | 30.0% | |
| CCTCTACAAATTCATTCTTA+AGG | - | chr7_1:77925565-77925584 | None:intergenic | 30.0% | |
| CCTTAAGAATGAATTTGTAG+AGG | + | chr7_1:77925562-77925581 | Msa1040540:CDS | 30.0% | |
| TGATAATCGTTAATACTGAC+AGG | + | chr7_1:77925744-77925763 | Msa1040540:intron | 30.0% | |
| ACACCCTGTCAAATTAAAAA+TGG | - | chr7_1:77925844-77925863 | None:intergenic | 30.0% | |
| AACAATTAGATGTGATTGAC+AGG | + | chr7_1:77925956-77925975 | Msa1040540:CDS | 30.0% | |
| GAAAATGTTTCAGTTTATGG+AGG | - | chr7_1:77926093-77926112 | None:intergenic | 30.0% | |
| AGGGAAAATGTTTCAGTTTA+TGG | - | chr7_1:77926096-77926115 | None:intergenic | 30.0% | |
| ATCTACTGTGGAATAAGAAA+GGG | - | chr7_1:77926115-77926134 | None:intergenic | 30.0% | |
| AATCTACTGTGGAATAAGAA+AGG | - | chr7_1:77926116-77926135 | None:intergenic | 30.0% | |
| TAACCAAAATCCAACTAAGA+AGG | - | chr7_1:77926165-77926184 | None:intergenic | 30.0% | |
| !! | TTAAGATTTGGTGATAGTGT+TGG | + | chr7_1:77926335-77926354 | Msa1040540:intron | 30.0% |
| TAGTAAACTCATGTTCTTAG+AGG | - | chr7_1:77926375-77926394 | None:intergenic | 30.0% | |
| TTTACAAATTTATTCACGCG+AGG | + | chr7_1:77926424-77926443 | Msa1040540:intron | 30.0% | |
| ! | CTGATTTTCTTGACCTAAAT+AGG | - | chr7_1:77926579-77926598 | None:intergenic | 30.0% |
| ! | TGAACATTTTTCTCTACTCT+GGG | - | chr7_1:77926671-77926690 | None:intergenic | 30.0% |
| ! | ATGAACATTTTTCTCTACTC+TGG | - | chr7_1:77926672-77926691 | None:intergenic | 30.0% |
| !! | ATCACTTTTGAATAGAGTAG+AGG | + | chr7_1:77926690-77926709 | Msa1040540:CDS | 30.0% |
| TGCTAACAAAGAATGATTAC+TGG | - | chr7_1:77926823-77926842 | None:intergenic | 30.0% | |
| AGTAATCATTCTTTGTTAGC+AGG | + | chr7_1:77926822-77926841 | Msa1040540:intron | 30.0% | |
| CAAAGAAAATAAGATAAGCG+TGG | + | chr7_1:77926879-77926898 | Msa1040540:CDS | 30.0% | |
| GGTTTACATTGCTAAATTTG+CGG | - | chr7_1:77927319-77927338 | None:intergenic | 30.0% | |
| CATTGCTTTGACAAAAAGAG+AGG | - | chr7_1:77922482-77922501 | None:intergenic | 35.0% | |
| CAAAGAGCAAAGAGAAGAAA+AGG | + | chr7_1:77922546-77922565 | Msa1040540:five_prime_UTR | 35.0% | |
| AAGAGCAAAGAGAAGAAAAG+GGG | + | chr7_1:77922548-77922567 | Msa1040540:five_prime_UTR | 35.0% | |
| AAGAGAAGAAAAGGGGAAAA+TGG | + | chr7_1:77922555-77922574 | Msa1040540:exon | 35.0% | |
| !! | AAAAGCTTTGAATCGAGCAA+CGG | - | chr7_1:77922641-77922660 | None:intergenic | 35.0% |
| ! | AATGAAATTGGGTTGCCAAT+CGG | - | chr7_1:77922677-77922696 | None:intergenic | 35.0% |
| !! | AATGATTGGTTTAATCGAGG+AGG | + | chr7_1:77922857-77922876 | Msa1040540:CDS | 35.0% |
| TTTGCTTTATAGGCTGTGTT+TGG | + | chr7_1:77923015-77923034 | Msa1040540:intron | 35.0% | |
| ! | TTTGAATGCAGCATTTTGGA+GGG | - | chr7_1:77923363-77923382 | None:intergenic | 35.0% |
| ! | CATGTTTGAATGCAGCATTT+TGG | - | chr7_1:77923367-77923386 | None:intergenic | 35.0% |
| !!! | GGTCATTTTTCTGACTAGTT+GGG | - | chr7_1:77923507-77923526 | None:intergenic | 35.0% |
| !!! | TGGTCATTTTTCTGACTAGT+TGG | - | chr7_1:77923508-77923527 | None:intergenic | 35.0% |
| ! | AGCTGGTCTGATTATTAAGT+TGG | - | chr7_1:77923528-77923547 | None:intergenic | 35.0% |
| CAACCTTAAGCATAGGAATT+AGG | - | chr7_1:77923583-77923602 | None:intergenic | 35.0% | |
| TTGCTAACAACCTTAAGCAT+AGG | - | chr7_1:77923590-77923609 | None:intergenic | 35.0% | |
| CAACATATATTTCATGGTCC+CGG | + | chr7_1:77923725-77923744 | Msa1040540:intron | 35.0% | |
| CTATCTGAAAGTTGTAGGTA+AGG | - | chr7_1:77923946-77923965 | None:intergenic | 35.0% | |
| GATAGTACACCCCAAATAAT+TGG | + | chr7_1:77923986-77924005 | Msa1040540:intron | 35.0% | |
| AGTGTTTGTGCTTCATAGTT+TGG | - | chr7_1:77924042-77924061 | None:intergenic | 35.0% | |
| TGAAGCACAAACACTTCATA+TGG | + | chr7_1:77924047-77924066 | Msa1040540:intron | 35.0% | |
| TATCTGTGTTAGTGCTTCAT+AGG | + | chr7_1:77924142-77924161 | Msa1040540:intron | 35.0% | |
| TTCATAGGTTTCATGTGAAC+TGG | + | chr7_1:77924157-77924176 | Msa1040540:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr7_1:77924235-77924254 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr7_1:77924234-77924253 | Msa1040540:intron | 35.0% | |
| !! | AACGCGTTTACGTTTTTCAA+CGG | - | chr7_1:77924449-77924468 | None:intergenic | 35.0% |
| !!! | GTTTTGAAACCCAGAAAACT+GGG | + | chr7_1:77924494-77924513 | Msa1040540:intron | 35.0% |
| TGTTTCGCTTTCCATTAATC+CGG | + | chr7_1:77924545-77924564 | Msa1040540:intron | 35.0% | |
| GGAGTTGAGTACTATGAATA+TGG | - | chr7_1:77924788-77924807 | None:intergenic | 35.0% | |
| TAAATAAGTGACGTGAGAGA+GGG | - | chr7_1:77924809-77924828 | None:intergenic | 35.0% | |
| ATAAATAAGTGACGTGAGAG+AGG | - | chr7_1:77924810-77924829 | None:intergenic | 35.0% | |
| AACCCTGTGCTTCAAATAAA+GGG | - | chr7_1:77925080-77925099 | None:intergenic | 35.0% | |
| AGCATAAGGATTACGTACAT+CGG | + | chr7_1:77925192-77925211 | Msa1040540:intron | 35.0% | |
| TGCATGAAAGCAAACATGAA+CGG | - | chr7_1:77925254-77925273 | None:intergenic | 35.0% | |
| TAATTAAGTTTGCAGCTTGC+AGG | + | chr7_1:77925292-77925311 | Msa1040540:intron | 35.0% | |
| CATCTAGCATACTCAAACAA+AGG | - | chr7_1:77925334-77925353 | None:intergenic | 35.0% | |
| AACATCTATCAGAAAGTCAC+TGG | + | chr7_1:77925423-77925442 | Msa1040540:CDS | 35.0% | |
| AAATTTCAGGAGATATGTGG+AGG | + | chr7_1:77925473-77925492 | Msa1040540:CDS | 35.0% | |
| AATTTCAGGAGATATGTGGA+GGG | + | chr7_1:77925474-77925493 | Msa1040540:CDS | 35.0% | |
| AACATTACAGAAGCTTCATC+CGG | - | chr7_1:77925500-77925519 | None:intergenic | 35.0% | |
| ATGAAGCTTCTGTAATGTTG+AGG | + | chr7_1:77925501-77925520 | Msa1040540:CDS | 35.0% | |
| ! | TAATGTTGAGGTATCTGTCA+GGG | + | chr7_1:77925513-77925532 | Msa1040540:CDS | 35.0% |
| TATCACATTTAGGTAGCAGT+TGG | + | chr7_1:77925673-77925692 | Msa1040540:intron | 35.0% | |
| CAATGATAATTCCTCCCAAA+GGG | - | chr7_1:77925776-77925795 | None:intergenic | 35.0% | |
| TCAATGATAATTCCTCCCAA+AGG | - | chr7_1:77925777-77925796 | None:intergenic | 35.0% | |
| !! | ACTGATTTGATTCTTATGCC+TGG | + | chr7_1:77925802-77925821 | Msa1040540:intron | 35.0% |
| GTGATGTTCTGTACTTGATT+TGG | + | chr7_1:77925914-77925933 | Msa1040540:CDS | 35.0% | |
| ! | AAGCCTTCTTAGTTGGATTT+TGG | + | chr7_1:77926159-77926178 | Msa1040540:intron | 35.0% |
| CGTGACCACTAATTAAGATT+TGG | + | chr7_1:77926323-77926342 | Msa1040540:intron | 35.0% | |
| ! | AATAGAGTAGAGGAAGTACA+TGG | + | chr7_1:77926700-77926719 | Msa1040540:CDS | 35.0% |
| TCGTTGATATCTGTGTATGA+TGG | - | chr7_1:77927084-77927103 | None:intergenic | 35.0% | |
| TTCTCTCACTTTCAGACTTA+CGG | - | chr7_1:77927340-77927359 | None:intergenic | 35.0% | |
| ! | TAGGGTTTTTAACCCTCATT+TGG | + | chr7_1:77927488-77927507 | Msa1040540:three_prime_UTR | 35.0% |
| CTAATTATCGAGTCTCTAGT+AGG | + | chr7_1:77927560-77927579 | Msa1040540:three_prime_UTR | 35.0% | |
| ATAACTTCGTCGTTCCAATC+GGG | - | chr7_1:77922616-77922635 | None:intergenic | 40.0% | |
| GATAACTTCGTCGTTCCAAT+CGG | - | chr7_1:77922617-77922636 | None:intergenic | 40.0% | |
| !! | GCTCGATTCAAAGCTTTTTC+CGG | + | chr7_1:77922643-77922662 | Msa1040540:CDS | 40.0% |
| ! | GGCAACCCAATTTCATTTTC+TGG | + | chr7_1:77922680-77922699 | Msa1040540:CDS | 40.0% |
| TCTCCTCATAAAACCTTCTC+AGG | + | chr7_1:77922741-77922760 | Msa1040540:CDS | 40.0% | |
| !! | GTACCTGAGAAGGTTTTATG+AGG | - | chr7_1:77922747-77922766 | None:intergenic | 40.0% |
| TTCTCAGGTACTACCTACTA+GGG | + | chr7_1:77922756-77922775 | Msa1040540:intron | 40.0% | |
| TACATCGTCGATACACAAAG+GGG | - | chr7_1:77922888-77922907 | None:intergenic | 40.0% | |
| GTACATCGTCGATACACAAA+GGG | - | chr7_1:77922889-77922908 | None:intergenic | 40.0% | |
| AGTACATCGTCGATACACAA+AGG | - | chr7_1:77922890-77922909 | None:intergenic | 40.0% | |
| ! | TTTGTGTATCGACGATGTAC+TGG | + | chr7_1:77922889-77922908 | Msa1040540:CDS | 40.0% |
| !!! | GTTTGGCTCTAGTGTTTTAG+AGG | + | chr7_1:77923032-77923051 | Msa1040540:intron | 40.0% |
| AAACTGACAGAATGACAGGA+TGG | + | chr7_1:77923255-77923274 | Msa1040540:intron | 40.0% | |
| ! | GTTTGAATGCAGCATTTTGG+AGG | - | chr7_1:77923364-77923383 | None:intergenic | 40.0% |
| GATTCTTCAGCCATGATATC+TGG | - | chr7_1:77923554-77923573 | None:intergenic | 40.0% | |
| TATCATGGCTGAAGAATCTG+TGG | + | chr7_1:77923556-77923575 | Msa1040540:intron | 40.0% | |
| GGTCCTAATTCCTATGCTTA+AGG | + | chr7_1:77923577-77923596 | Msa1040540:intron | 40.0% | |
| CGGGACCATGAAATATATGT+TGG | - | chr7_1:77923727-77923746 | None:intergenic | 40.0% | |
| TCAAATGAACTCTACAAGGG+TGG | - | chr7_1:77923751-77923770 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr7_1:77924228-77924247 | Msa1040540:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr7_1:77924229-77924248 | Msa1040540:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr7_1:77924260-77924279 | Msa1040540:intron | 40.0% | |
| !! | AAGTCGTTGGAATCGCTTTT+TGG | + | chr7_1:77924405-77924424 | Msa1040540:intron | 40.0% |
| ATCGTACGTTTCAGACGATT+CGG | + | chr7_1:77924472-77924491 | Msa1040540:intron | 40.0% | |
| !!! | GGTTTTGAAACCCAGAAAAC+TGG | + | chr7_1:77924493-77924512 | Msa1040540:intron | 40.0% |
| TGGAAAGCGAAACAGAAAGT+GGG | - | chr7_1:77924539-77924558 | None:intergenic | 40.0% | |
| ATGGAAAGCGAAACAGAAAG+TGG | - | chr7_1:77924540-77924559 | None:intergenic | 40.0% | |
| CTTTCCATTAATCCGGATTC+CGG | + | chr7_1:77924552-77924571 | Msa1040540:intron | 40.0% | |
| TTTCCATTAATCCGGATTCC+GGG | + | chr7_1:77924553-77924572 | Msa1040540:intron | 40.0% | |
| ! | AAATGCGTTTAGGGTGAATC+CGG | - | chr7_1:77924592-77924611 | None:intergenic | 40.0% |
| TCGAGATCCTAAGTAAGATC+GGG | - | chr7_1:77925034-77925053 | None:intergenic | 40.0% | |
| CTCGAGATCCTAAGTAAGAT+CGG | - | chr7_1:77925035-77925054 | None:intergenic | 40.0% | |
| ! | TTGCCCTTTATTTGAAGCAC+AGG | + | chr7_1:77925074-77925093 | Msa1040540:intron | 40.0% |
| ! | TGCCCTTTATTTGAAGCACA+GGG | + | chr7_1:77925075-77925094 | Msa1040540:intron | 40.0% |
| CAACCCTGTGCTTCAAATAA+AGG | - | chr7_1:77925081-77925100 | None:intergenic | 40.0% | |
| ! | CTTTATTTGAAGCACAGGGT+TGG | + | chr7_1:77925079-77925098 | Msa1040540:intron | 40.0% |
| !!! | CGTACATCGGTTCATTTTCA+CGG | + | chr7_1:77925205-77925224 | Msa1040540:intron | 40.0% |
| ! | TTTTCACGGTGTATGATACC+TGG | + | chr7_1:77925219-77925238 | Msa1040540:intron | 40.0% |
| TGTTTGCTTTCATGCAATGC+TGG | + | chr7_1:77925258-77925277 | Msa1040540:intron | 40.0% | |
| ! | GTAATGTTGAGGTATCTGTC+AGG | + | chr7_1:77925512-77925531 | Msa1040540:CDS | 40.0% |
| ACATTTAGGTAGCAGTTGGT+GGG | + | chr7_1:77925677-77925696 | Msa1040540:intron | 40.0% | |
| GGAAATAAGACAAGCAATCC+AGG | - | chr7_1:77925823-77925842 | None:intergenic | 40.0% | |
| AATCCAACTAAGAAGGCTTC+CGG | - | chr7_1:77926158-77926177 | None:intergenic | 40.0% | |
| ATGTTCTTAGAGGATCACGT+GGG | - | chr7_1:77926365-77926384 | None:intergenic | 40.0% | |
| TAGGTCAAGAAAATCAGCAG+TGG | + | chr7_1:77926582-77926601 | Msa1040540:intron | 40.0% | |
| TGATGCAGAGTCAACGAAAA+CGG | + | chr7_1:77926732-77926751 | Msa1040540:CDS | 40.0% | |
| !! | GTTTCTGAAGCTATGCAGAT+TGG | + | chr7_1:77926844-77926863 | Msa1040540:CDS | 40.0% |
| TTCGCAGAAGGAAGTTGAAA+AGG | + | chr7_1:77926945-77926964 | Msa1040540:CDS | 40.0% | |
| AAGGAAGTTGAAAAGGCTCT+AGG | + | chr7_1:77926952-77926971 | Msa1040540:CDS | 40.0% | |
| ! | TCACTGGTAGTAGTCTTTTC+CGG | - | chr7_1:77927174-77927193 | None:intergenic | 40.0% |
| AAGACTACTACCAGTGAAGA+AGG | + | chr7_1:77927177-77927196 | Msa1040540:CDS | 40.0% | |
| TGAAGAAGGAACTGCAACTT+TGG | + | chr7_1:77927191-77927210 | Msa1040540:CDS | 40.0% | |
| TAGCAAAGGAAGTTCCCGAT+TGG | + | chr7_1:77922599-77922618 | Msa1040540:CDS | 45.0% | |
| TTTCCGGTCAAAGATCCGAT+TGG | + | chr7_1:77922659-77922678 | Msa1040540:CDS | 45.0% | |
| TTGCCAATCGGATCTTTGAC+CGG | - | chr7_1:77922665-77922684 | None:intergenic | 45.0% | |
| CTAGTAGGTAGTACCTGAGA+AGG | - | chr7_1:77922757-77922776 | None:intergenic | 45.0% | |
| CTTCTCAGGTACTACCTACT+AGG | + | chr7_1:77922755-77922774 | Msa1040540:intron | 45.0% | |
| AAGGTGACATCACAAGACGT+GGG | + | chr7_1:77923450-77923469 | Msa1040540:intron | 45.0% | |
| GATCTTGTTGATCCAACGAG+TGG | + | chr7_1:77923473-77923492 | Msa1040540:intron | 45.0% | |
| ACCAGCTACACCAGATATCA+TGG | + | chr7_1:77923541-77923560 | Msa1040540:intron | 45.0% | |
| ! | TGTACACAGTTGAAGCATCC+AGG | + | chr7_1:77923814-77923833 | Msa1040540:intron | 45.0% |
| ! | GTACACAGTTGAAGCATCCA+GGG | + | chr7_1:77923815-77923834 | Msa1040540:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr7_1:77924224-77924243 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr7_1:77924256-77924275 | Msa1040540:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr7_1:77924259-77924278 | Msa1040540:intron | 45.0% | |
| GAGTTTGTCTACCTTGAACC+CGG | - | chr7_1:77924326-77924345 | None:intergenic | 45.0% | |
| AAGCGATTCCAACGACTTTC+CGG | - | chr7_1:77924403-77924422 | None:intergenic | 45.0% | |
| !!! | TCGTTGGAATCGCTTTTTGG+TGG | + | chr7_1:77924408-77924427 | Msa1040540:intron | 45.0% |
| ! | AATGCGTTTAGGGTGAATCC+GGG | - | chr7_1:77924591-77924610 | None:intergenic | 45.0% |
| GATCCTAAGTAAGATCGGGT+AGG | - | chr7_1:77925030-77925049 | None:intergenic | 45.0% | |
| TCGAGTTTGTCTACCTTGAC+CGG | + | chr7_1:77925050-77925069 | Msa1040540:intron | 45.0% | |
| GCTTCAAATAAAGGGCAACC+CGG | - | chr7_1:77925072-77925091 | None:intergenic | 45.0% | |
| TGGAACAGCACAGTATCTGT+CGG | + | chr7_1:77925538-77925557 | Msa1040540:CDS | 45.0% | |
| CACATTTAGGTAGCAGTTGG+TGG | + | chr7_1:77925676-77925695 | Msa1040540:intron | 45.0% | |
| ACTGACAGGATTGTTCCCTT+TGG | + | chr7_1:77925758-77925777 | Msa1040540:intron | 45.0% | |
| CTGACAGGATTGTTCCCTTT+GGG | + | chr7_1:77925759-77925778 | Msa1040540:intron | 45.0% | |
| CATGTTCTTAGAGGATCACG+TGG | - | chr7_1:77926366-77926385 | None:intergenic | 45.0% | |
| ACACAGCATCGCTGTTAACT+GGG | - | chr7_1:77926510-77926529 | None:intergenic | 45.0% | |
| CAGTGGCTTCTCTACATTCT+GGG | + | chr7_1:77926599-77926618 | Msa1040540:CDS | 45.0% | |
| GGAACAGAAAATTAGCCCTC+AGG | + | chr7_1:77926620-77926639 | Msa1040540:CDS | 45.0% | |
| AATTAGCCCTCAGGTATGCA+AGG | + | chr7_1:77926629-77926648 | Msa1040540:CDS | 45.0% | |
| ATTAGCCCTCAGGTATGCAA+GGG | + | chr7_1:77926630-77926649 | Msa1040540:CDS | 45.0% | |
| AAGCTATGCAGATTGGAGCA+CGG | + | chr7_1:77926851-77926870 | Msa1040540:CDS | 45.0% | |
| TCTGCGAATCAATGCTCTCT+TGG | - | chr7_1:77926933-77926952 | None:intergenic | 45.0% | |
| !! | AGAGAGCATTGATTCGCAGA+AGG | + | chr7_1:77926933-77926952 | Msa1040540:CDS | 45.0% |
| CGAACTTGAAGAGTTAGAGC+TGG | + | chr7_1:77927119-77927138 | Msa1040540:CDS | 45.0% | |
| !! | AGAGGCTCAAGTTGATACAC+CGG | + | chr7_1:77927152-77927171 | Msa1040540:CDS | 45.0% |
| AGTTGCAGTTCCTTCTTCAC+TGG | - | chr7_1:77927190-77927209 | None:intergenic | 45.0% | |
| AAACTTTCAGACCGTCCAGT+CGG | + | chr7_1:77927252-77927271 | Msa1040540:CDS | 45.0% | |
| GAAGTCAAGAACCACTCATG+CGG | + | chr7_1:77927275-77927294 | Msa1040540:CDS | 45.0% | |
| ! | AGGTCCTTTGAGCACACTTT+TGG | + | chr7_1:77927535-77927554 | Msa1040540:three_prime_UTR | 45.0% |
| ! | GGTCCTTTGAGCACACTTTT+GGG | + | chr7_1:77927536-77927555 | Msa1040540:three_prime_UTR | 45.0% |
| ! | AGTCCCAAAAGTGTGCTCAA+AGG | - | chr7_1:77927542-77927561 | None:intergenic | 45.0% |
| !!! | TTGTTTTTTTTTTTTTTTTT+AGG | + | chr7_1:77922829-77922848 | Msa1040540:intron | 5.0% |
| !! | ATCTAAAAAAAAATTTATAT+GGG | + | chr7_1:77927585-77927604 | Msa1040540:three_prime_UTR | 5.0% |
| GAAGGTGACATCACAAGACG+TGG | + | chr7_1:77923449-77923468 | Msa1040540:intron | 50.0% | |
| AGGTGACATCACAAGACGTG+GGG | + | chr7_1:77923451-77923470 | Msa1040540:intron | 50.0% | |
| TGGGAGAATCTTCCACTCGT+TGG | - | chr7_1:77923488-77923507 | None:intergenic | 50.0% | |
| GCCATGATATCTGGTGTAGC+TGG | - | chr7_1:77923545-77923564 | None:intergenic | 50.0% | |
| ATGAACTCTACAAGGGTGGC+CGG | - | chr7_1:77923747-77923766 | None:intergenic | 50.0% | |
| GTCAGATTTCTCAGAGACCC+TGG | - | chr7_1:77923835-77923854 | None:intergenic | 50.0% | |
| GTTGTTGTCATGCGACCGTA+AGG | + | chr7_1:77924184-77924203 | Msa1040540:intron | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | - | chr7_1:77924202-77924221 | None:intergenic | 50.0% | |
| AAACTCGCGATCCAACTCGT+AGG | + | chr7_1:77924340-77924359 | Msa1040540:intron | 50.0% | |
| GGGATGTGAGATCGCAAACT+CGG | - | chr7_1:77924371-77924390 | None:intergenic | 50.0% | |
| ATTCCAACGACTTTCCGGCA+CGG | - | chr7_1:77924398-77924417 | None:intergenic | 50.0% | |
| !!! | GAATCGCTTTTTGGTGGTCG+CGG | + | chr7_1:77924414-77924433 | Msa1040540:intron | 50.0% |
| AACCCAGAAAACTGGGTTCG+CGG | + | chr7_1:77924501-77924520 | Msa1040540:intron | 50.0% | |
| ACCCATGAGATCGTGAATCG+GGG | - | chr7_1:77925007-77925026 | None:intergenic | 50.0% | |
| GACCCATGAGATCGTGAATC+GGG | - | chr7_1:77925008-77925027 | None:intergenic | 50.0% | |
| GGACCCATGAGATCGTGAAT+CGG | - | chr7_1:77925009-77925028 | None:intergenic | 50.0% | |
| GGTCCTACCCGATCTTACTT+AGG | + | chr7_1:77925024-77925043 | Msa1040540:intron | 50.0% | |
| CGAGTTTGTCTACCTTGACC+GGG | + | chr7_1:77925051-77925070 | Msa1040540:intron | 50.0% | |
| AATAAAGGGCAACCCGGTCA+AGG | - | chr7_1:77925066-77925085 | None:intergenic | 50.0% | |
| CATGAACGGTTGCTGATACC+AGG | - | chr7_1:77925240-77925259 | None:intergenic | 50.0% | |
| AGTTTGCAGCTTGCAGGACT+TGG | + | chr7_1:77925298-77925317 | Msa1040540:intron | 50.0% | |
| GTTTGCAGCTTGCAGGACTT+GGG | + | chr7_1:77925299-77925318 | Msa1040540:intron | 50.0% | |
| ! | TTGAGGTATCTGTCAGGGTG+TGG | + | chr7_1:77925518-77925537 | Msa1040540:CDS | 50.0% |
| ACAGGATTGTTCCCTTTGGG+AGG | + | chr7_1:77925762-77925781 | Msa1040540:intron | 50.0% | |
| CTCTCAGCAGCAGCATTATC+TGG | + | chr7_1:77925874-77925893 | Msa1040540:CDS | 50.0% | |
| GACACAGCATCGCTGTTAAC+TGG | - | chr7_1:77926511-77926530 | None:intergenic | 50.0% | |
| GCAGTGGCTTCTCTACATTC+TGG | + | chr7_1:77926598-77926617 | Msa1040540:CDS | 50.0% | |
| GTATGCAAGGGAGCTGAAGT+TGG | + | chr7_1:77926642-77926661 | Msa1040540:CDS | 50.0% | |
| AGCTATGCAGATTGGAGCAC+GGG | + | chr7_1:77926852-77926871 | Msa1040540:CDS | 50.0% | |
| ! | AGAGCTGGCTCTTGAGAAAG+AGG | + | chr7_1:77927134-77927153 | Msa1040540:CDS | 50.0% |
| AACTTTCAGACCGTCCAGTC+GGG | + | chr7_1:77927253-77927272 | Msa1040540:CDS | 50.0% | |
| TTCTTGACTTCCCGACTGGA+CGG | - | chr7_1:77927266-77927285 | None:intergenic | 50.0% | |
| TGAACTCTACAAGGGTGGCC+GGG | - | chr7_1:77923746-77923765 | None:intergenic | 55.0% | |
| GTCATGCGACCGTAAGGTCA+CGG | + | chr7_1:77924190-77924209 | Msa1040540:intron | 55.0% | |
| TCATGCGACCGTAAGGTCAC+GGG | + | chr7_1:77924191-77924210 | Msa1040540:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr7_1:77924203-77924222 | Msa1040540:intron | 55.0% | |
| CTGAAGCTCCCGCATACACA+GGG | - | chr7_1:77924299-77924318 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATACAC+AGG | - | chr7_1:77924300-77924319 | None:intergenic | 55.0% | |
| ACTCGGACGATCCTACGAGT+TGG | - | chr7_1:77924354-77924373 | None:intergenic | 55.0% | |
| !! | GCTTTTTGGTGGTCGCGGTT+TGG | + | chr7_1:77924419-77924438 | Msa1040540:intron | 55.0% |
| ACCCAGAAAACTGGGTTCGC+GGG | + | chr7_1:77924502-77924521 | Msa1040540:intron | 55.0% | |
| ! | ACCCGCGAACCCAGTTTTCT+GGG | - | chr7_1:77924506-77924525 | None:intergenic | 55.0% |
| CATTAATCCGGATTCCGGGC+CGG | + | chr7_1:77924557-77924576 | Msa1040540:intron | 55.0% | |
| ATTAATCCGGATTCCGGGCC+GGG | + | chr7_1:77924558-77924577 | Msa1040540:intron | 55.0% | |
| TCCCCCGATTCACGATCTCA+TGG | + | chr7_1:77925002-77925021 | Msa1040540:intron | 55.0% | |
| CCCATGAGATCGTGAATCGG+GGG | - | chr7_1:77925006-77925025 | None:intergenic | 55.0% | |
| CCCCCGATTCACGATCTCAT+GGG | + | chr7_1:77925003-77925022 | Msa1040540:intron | 55.0% | |
| TCAGGAGATATGTGGAGGGC+CGG | + | chr7_1:77925478-77925497 | Msa1040540:CDS | 55.0% | |
| GTGCCGGAAGCCTTCTTAGT+TGG | + | chr7_1:77926152-77926171 | Msa1040540:intron | 55.0% | |
| CAGCTCCCTTGCATACCTGA+GGG | - | chr7_1:77926638-77926657 | None:intergenic | 55.0% | |
| TCAGCTCCCTTGCATACCTG+AGG | - | chr7_1:77926639-77926658 | None:intergenic | 55.0% | |
| GTGGTTCTTGACTTCCCGAC+TGG | - | chr7_1:77927270-77927289 | None:intergenic | 55.0% | |
| AGAACCACTCATGCGGCATC+TGG | + | chr7_1:77927282-77927301 | Msa1040540:CDS | 55.0% | |
| AACCCTCATTTGGCACCCCA+AGG | + | chr7_1:77927498-77927517 | Msa1040540:three_prime_UTR | 55.0% | |
| ! | CACCTTGGGGTGCCAAATGA+GGG | - | chr7_1:77927503-77927522 | None:intergenic | 55.0% |
| GAGGGAGACGCTCATTTGAG+AGG | - | chr7_1:77927621-77927640 | None:intergenic | 55.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr7_1:77924272-77924291 | Msa1040540:intron | 60.0% |
| CATACACAGGGTCCGGGAAG+GGG | - | chr7_1:77924287-77924306 | None:intergenic | 60.0% | |
| GCATACACAGGGTCCGGGAA+GGG | - | chr7_1:77924288-77924307 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGTGTATG+CGG | + | chr7_1:77924287-77924306 | Msa1040540:intron | 60.0% | |
| TTCCCGGACCCTGTGTATGC+GGG | + | chr7_1:77924288-77924307 | Msa1040540:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr7_1:77924304-77924323 | Msa1040540:intron | 60.0% | |
| GCTTCAGTGCACCGGGTTCA+AGG | + | chr7_1:77924312-77924331 | Msa1040540:intron | 60.0% | |
| ! | GACCCGCGAACCCAGTTTTC+TGG | - | chr7_1:77924507-77924526 | None:intergenic | 60.0% |
| CGGCCCGGAATCCGGATTAA+TGG | - | chr7_1:77924559-77924578 | None:intergenic | 60.0% | |
| GTGAATCCGGGTCATGAGCC+CGG | - | chr7_1:77924579-77924598 | None:intergenic | 60.0% | |
| TGCTCCAGATGCCGCATGAG+TGG | - | chr7_1:77927289-77927308 | None:intergenic | 60.0% | |
| ! | GCACCTTGGGGTGCCAAATG+AGG | - | chr7_1:77927504-77927523 | None:intergenic | 60.0% |
| !! | TGAGCCGTGGAAGCACCTTG+GGG | - | chr7_1:77927516-77927535 | None:intergenic | 60.0% |
| !! | CTGAGCCGTGGAAGCACCTT+GGG | - | chr7_1:77927517-77927536 | None:intergenic | 60.0% |
| TGCTCAAAGGACCTGAGCCG+TGG | - | chr7_1:77927529-77927548 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr7_1:77924274-77924293 | None:intergenic | 65.0% | |
| CGCATACACAGGGTCCGGGA+AGG | - | chr7_1:77924289-77924308 | None:intergenic | 65.0% | |
| CTCCCGCATACACAGGGTCC+GGG | - | chr7_1:77924293-77924312 | None:intergenic | 65.0% | |
| GCTCCCGCATACACAGGGTC+CGG | - | chr7_1:77924294-77924313 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr7_1:77924305-77924324 | Msa1040540:intron | 65.0% | |
| ACGACTTTCCGGCACGGCGA+GGG | - | chr7_1:77924392-77924411 | None:intergenic | 65.0% | |
| AACGACTTTCCGGCACGGCG+AGG | - | chr7_1:77924393-77924412 | None:intergenic | 65.0% | |
| TCGCCGTGCCGGAAAGTCGT+TGG | + | chr7_1:77924392-77924411 | Msa1040540:intron | 65.0% | |
| ! | GGCACCCCAAGGTGCTTCCA+CGG | + | chr7_1:77927509-77927528 | Msa1040540:three_prime_UTR | 65.0% |
| !! | CCTGAGCCGTGGAAGCACCT+TGG | - | chr7_1:77927518-77927537 | None:intergenic | 65.0% |
| ! | CCAAGGTGCTTCCACGGCTC+AGG | + | chr7_1:77927515-77927534 | Msa1040540:three_prime_UTR | 65.0% |
| CTCACATCCCCTCGCCGTGC+CGG | + | chr7_1:77924381-77924400 | Msa1040540:intron | 70.0% | |
| CGACTTTCCGGCACGGCGAG+GGG | - | chr7_1:77924391-77924410 | None:intergenic | 70.0% | |
| CATGAGCCCGGCCCGGAATC+CGG | - | chr7_1:77924567-77924586 | None:intergenic | 70.0% | |
| TCCGGGCCGGGCTCATGACC+CGG | + | chr7_1:77924570-77924589 | Msa1040540:intron | 75.0% | |
| TCCGGGTCATGAGCCCGGCC+CGG | - | chr7_1:77924574-77924593 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 77922475 | 77927653 | 77922475 | ID=Msa1040540;Name=Msa1040540 |
| chr7_1 | mRNA | 77922475 | 77927653 | 77922475 | ID=Msa1040540-mRNA-1;Parent=Msa1040540;Name=Msa1040540-mRNA-1;_AED=0.11;_eAED=0.11;_QI=99|0.83|1|1|1|1|7|318|374 |
| chr7_1 | exon | 77922475 | 77922762 | 77922475 | ID=Msa1040540-mRNA-1:exon:20675;Parent=Msa1040540-mRNA-1 |
| chr7_1 | exon | 77922851 | 77922910 | 77922851 | ID=Msa1040540-mRNA-1:exon:20676;Parent=Msa1040540-mRNA-1 |
| chr7_1 | exon | 77925401 | 77925583 | 77925401 | ID=Msa1040540-mRNA-1:exon:20677;Parent=Msa1040540-mRNA-1 |
| chr7_1 | exon | 77925859 | 77925989 | 77925859 | ID=Msa1040540-mRNA-1:exon:20678;Parent=Msa1040540-mRNA-1 |
| chr7_1 | exon | 77926585 | 77926753 | 77926585 | ID=Msa1040540-mRNA-1:exon:20679;Parent=Msa1040540-mRNA-1 |
| chr7_1 | exon | 77926844 | 77926973 | 77926844 | ID=Msa1040540-mRNA-1:exon:20680;Parent=Msa1040540-mRNA-1 |
| chr7_1 | exon | 77927073 | 77927653 | 77927073 | ID=Msa1040540-mRNA-1:exon:20681;Parent=Msa1040540-mRNA-1 |
| chr7_1 | five_prime_UTR | 77922475 | 77922573 | 77922475 | ID=Msa1040540-mRNA-1:five_prime_utr;Parent=Msa1040540-mRNA-1 |
| chr7_1 | CDS | 77922574 | 77922762 | 77922574 | ID=Msa1040540-mRNA-1:cds;Parent=Msa1040540-mRNA-1 |
| chr7_1 | CDS | 77922851 | 77922910 | 77922851 | ID=Msa1040540-mRNA-1:cds;Parent=Msa1040540-mRNA-1 |
| chr7_1 | CDS | 77925401 | 77925583 | 77925401 | ID=Msa1040540-mRNA-1:cds;Parent=Msa1040540-mRNA-1 |
| chr7_1 | CDS | 77925859 | 77925989 | 77925859 | ID=Msa1040540-mRNA-1:cds;Parent=Msa1040540-mRNA-1 |
| chr7_1 | CDS | 77926585 | 77926753 | 77926585 | ID=Msa1040540-mRNA-1:cds;Parent=Msa1040540-mRNA-1 |
| chr7_1 | CDS | 77926844 | 77926973 | 77926844 | ID=Msa1040540-mRNA-1:cds;Parent=Msa1040540-mRNA-1 |
| chr7_1 | CDS | 77927073 | 77927335 | 77927073 | ID=Msa1040540-mRNA-1:cds;Parent=Msa1040540-mRNA-1 |
| chr7_1 | three_prime_UTR | 77927336 | 77927653 | 77927336 | ID=Msa1040540-mRNA-1:three_prime_utr;Parent=Msa1040540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
