Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999220 | XP_024641383.1 | 83.465 | 127 | 12 | 3 | 117 | 238 | 1 | 123 | 1.22e-58 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999220 | A0A396HNG3 | 82.677 | 127 | 12 | 4 | 117 | 238 | 1 | 122 | 1.58e-56 | 185 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0999220 | 0.803275 | 3.768133e-49 | -8.615850e-47 |
| Msa0003890 | Msa0999220 | 0.833412 | 5.413291e-56 | -8.615850e-47 |
| Msa0006110 | Msa0999220 | 0.827371 | 1.623390e-54 | -8.615850e-47 |
| Msa0011170 | Msa0999220 | 0.810711 | 1.006366e-50 | -8.615850e-47 |
| Msa0014710 | Msa0999220 | 0.800506 | 1.396007e-48 | -8.615850e-47 |
| Msa0015400 | Msa0999220 | 0.809149 | 2.182185e-50 | -8.615850e-47 |
| Msa0018650 | Msa0999220 | 0.808948 | 2.409486e-50 | -8.615850e-47 |
| Msa0029240 | Msa0999220 | 0.809408 | 1.920344e-50 | -8.615850e-47 |
| Msa0042920 | Msa0999220 | 0.804721 | 1.885347e-49 | -8.615850e-47 |
| Msa0044000 | Msa0999220 | 0.804932 | 1.703521e-49 | -8.615850e-47 |
| Msa0044090 | Msa0999220 | 0.819986 | 8.707308e-53 | -8.615850e-47 |
| Msa0054480 | Msa0999220 | 0.803107 | 4.082761e-49 | -8.615850e-47 |
| Msa0064970 | Msa0999220 | 0.808782 | 2.614579e-50 | -8.615850e-47 |
| Msa0075470 | Msa0999220 | 0.818789 | 1.631523e-52 | -8.615850e-47 |
| Msa0075880 | Msa0999220 | 0.804579 | 2.019219e-49 | -8.615850e-47 |
| Msa0076220 | Msa0999220 | 0.825131 | 5.541763e-54 | -8.615850e-47 |
| Msa0078900 | Msa0999220 | 0.810246 | 1.268214e-50 | -8.615850e-47 |
| Msa0079070 | Msa0999220 | 0.816274 | 6.018459e-52 | -8.615850e-47 |
| Msa0105070 | Msa0999220 | 0.832798 | 7.697542e-56 | -8.615850e-47 |
| Msa0112590 | Msa0999220 | 0.804684 | 1.919516e-49 | -8.615850e-47 |
| Msa0116770 | Msa0999220 | 0.815560 | 8.684975e-52 | -8.615850e-47 |
| Msa0607910 | Msa0999220 | 0.812067 | 5.107239e-51 | -8.615850e-47 |
| Msa0610800 | Msa0999220 | 0.801092 | 1.059894e-48 | -8.615850e-47 |
| Msa0610840 | Msa0999220 | -0.803487 | 3.405353e-49 | -8.615850e-47 |
| Msa0610880 | Msa0999220 | 0.800737 | 1.252504e-48 | -8.615850e-47 |
| Msa0613440 | Msa0999220 | 0.800710 | 1.268262e-48 | -8.615850e-47 |
| Msa0615010 | Msa0999220 | 0.806570 | 7.714622e-50 | -8.615850e-47 |
| Msa0625720 | Msa0999220 | 0.815343 | 9.703348e-52 | -8.615850e-47 |
| Msa0629450 | Msa0999220 | 0.811200 | 7.883576e-51 | -8.615850e-47 |
| Msa0632740 | Msa0999220 | 0.812050 | 5.151204e-51 | -8.615850e-47 |
| Msa0650630 | Msa0999220 | 0.831108 | 2.012441e-55 | -8.615850e-47 |
| Msa0661650 | Msa0999220 | 0.814415 | 1.559107e-51 | -8.615850e-47 |
| Msa0663810 | Msa0999220 | 0.800891 | 1.164863e-48 | -8.615850e-47 |
| Msa0672570 | Msa0999220 | 0.813114 | 3.015617e-51 | -8.615850e-47 |
| Msa0673460 | Msa0999220 | 0.811249 | 7.693176e-51 | -8.615850e-47 |
| Msa0681250 | Msa0999220 | 0.831062 | 2.064763e-55 | -8.615850e-47 |
| Msa0681270 | Msa0999220 | 0.826852 | 2.160582e-54 | -8.615850e-47 |
| Msa0688480 | Msa0999220 | 0.800494 | 1.403820e-48 | -8.615850e-47 |
| Msa0701010 | Msa0999220 | 0.805768 | 1.138155e-49 | -8.615850e-47 |
| Msa0729800 | Msa0999220 | 0.804891 | 1.737931e-49 | -8.615850e-47 |
| Msa0731940 | Msa0999220 | 0.831861 | 1.312643e-55 | -8.615850e-47 |
| Msa0735170 | Msa0999220 | 0.804715 | 1.891249e-49 | -8.615850e-47 |
| Msa0756460 | Msa0999220 | 0.831117 | 2.002118e-55 | -8.615850e-47 |
| Msa0760130 | Msa0999220 | 0.821238 | 4.490903e-53 | -8.615850e-47 |
| Msa0760410 | Msa0999220 | 0.800650 | 1.304693e-48 | -8.615850e-47 |
| Msa0766630 | Msa0999220 | 0.827233 | 1.752207e-54 | -8.615850e-47 |
| Msa0767760 | Msa0999220 | 0.804286 | 2.323456e-49 | -8.615850e-47 |
| Msa0768290 | Msa0999220 | 0.822795 | 1.956834e-53 | -8.615850e-47 |
| Msa0768370 | Msa0999220 | 0.844421 | 7.640466e-59 | -8.615850e-47 |
| Msa0784290 | Msa0999220 | 0.802681 | 4.998589e-49 | -8.615850e-47 |
| Msa0797770 | Msa0999220 | 0.813055 | 3.106047e-51 | -8.615850e-47 |
| Msa0810220 | Msa0999220 | 0.805058 | 1.603325e-49 | -8.615850e-47 |
| Msa0820850 | Msa0999220 | 0.832651 | 8.369551e-56 | -8.615850e-47 |
| Msa0824590 | Msa0999220 | 0.834704 | 2.570067e-56 | -8.615850e-47 |
| Msa0832340 | Msa0999220 | 0.856566 | 2.951100e-62 | -8.615850e-47 |
| Msa0835230 | Msa0999220 | 0.823928 | 1.063315e-53 | -8.615850e-47 |
| Msa0124250 | Msa0999220 | 0.816932 | 4.285315e-52 | -8.615850e-47 |
| Msa0127800 | Msa0999220 | 0.817612 | 3.012139e-52 | -8.615850e-47 |
| Msa0131770 | Msa0999220 | 0.846989 | 1.535224e-59 | -8.615850e-47 |
| Msa0158480 | Msa0999220 | 0.808096 | 3.663849e-50 | -8.615850e-47 |
| Msa0165210 | Msa0999220 | 0.830727 | 2.495199e-55 | -8.615850e-47 |
| Msa0180500 | Msa0999220 | 0.830583 | 2.707023e-55 | -8.615850e-47 |
| Msa0194440 | Msa0999220 | 0.818022 | 2.434865e-52 | -8.615850e-47 |
| Msa0204840 | Msa0999220 | 0.803278 | 3.761767e-49 | -8.615850e-47 |
| Msa0205510 | Msa0999220 | 0.816830 | 4.518017e-52 | -8.615850e-47 |
| Msa0212990 | Msa0999220 | 0.812741 | 3.639121e-51 | -8.615850e-47 |
| Msa0214300 | Msa0999220 | 0.814559 | 1.448203e-51 | -8.615850e-47 |
| Msa0218370 | Msa0999220 | 0.819722 | 1.000315e-52 | -8.615850e-47 |
| Msa0223010 | Msa0999220 | 0.822980 | 1.771406e-53 | -8.615850e-47 |
| Msa0233080 | Msa0999220 | 0.800621 | 1.322297e-48 | -8.615850e-47 |
| Msa0233300 | Msa0999220 | 0.816854 | 4.461816e-52 | -8.615850e-47 |
| Msa0367870 | Msa0999220 | 0.820492 | 6.667574e-53 | -8.615850e-47 |
| Msa0371730 | Msa0999220 | 0.829552 | 4.828726e-55 | -8.615850e-47 |
| Msa0373450 | Msa0999220 | 0.801633 | 8.212376e-49 | -8.615850e-47 |
| Msa0381610 | Msa0999220 | -0.800845 | 1.190577e-48 | -8.615850e-47 |
| Msa0384890 | Msa0999220 | 0.803901 | 2.793459e-49 | -8.615850e-47 |
| Msa0407960 | Msa0999220 | 0.804307 | 2.300302e-49 | -8.615850e-47 |
| Msa0416650 | Msa0999220 | 0.804239 | 2.376346e-49 | -8.615850e-47 |
| Msa0424320 | Msa0999220 | 0.808570 | 2.903161e-50 | -8.615850e-47 |
| Msa0425790 | Msa0999220 | 0.809762 | 1.611821e-50 | -8.615850e-47 |
| Msa0440750 | Msa0999220 | 0.831174 | 1.938216e-55 | -8.615850e-47 |
| Msa0453640 | Msa0999220 | 0.801240 | 9.885846e-49 | -8.615850e-47 |
| Msa0455760 | Msa0999220 | 0.835398 | 1.717073e-56 | -8.615850e-47 |
| Msa0460590 | Msa0999220 | 0.802120 | 6.523158e-49 | -8.615850e-47 |
| Msa0464680 | Msa0999220 | 0.837607 | 4.705642e-57 | -8.615850e-47 |
| Msa0466120 | Msa0999220 | 0.813312 | 2.728571e-51 | -8.615850e-47 |
| Msa0471380 | Msa0999220 | 0.801485 | 8.806067e-49 | -8.615850e-47 |
| Msa0471670 | Msa0999220 | 0.804320 | 2.285911e-49 | -8.615850e-47 |
| Msa0471900 | Msa0999220 | 0.801645 | 8.167674e-49 | -8.615850e-47 |
| Msa0479340 | Msa0999220 | 0.830778 | 2.424529e-55 | -8.615850e-47 |
| Msa0989620 | Msa0999220 | 0.800538 | 1.375198e-48 | -8.615850e-47 |
| Msa0997370 | Msa0999220 | 0.812963 | 3.254171e-51 | -8.615850e-47 |
| Msa0998690 | Msa0999220 | 0.802918 | 4.466091e-49 | -8.615850e-47 |
| Msa0999220 | Msa1000880 | 0.808382 | 3.182990e-50 | -8.615850e-47 |
| Msa0999220 | Msa1000890 | 0.812605 | 3.898288e-51 | -8.615850e-47 |
| Msa0999220 | Msa1000900 | 0.814994 | 1.160246e-51 | -8.615850e-47 |
| Msa0999220 | Msa1003620 | 0.804769 | 1.842794e-49 | -8.615850e-47 |
| Msa0999220 | Msa1014540 | 0.832131 | 1.125759e-55 | -8.615850e-47 |
| Msa0999220 | Msa1016320 | 0.830554 | 2.750514e-55 | -8.615850e-47 |
| Msa0999220 | Msa1019150 | 0.817188 | 3.753308e-52 | -8.615850e-47 |
| Msa0999220 | Msa1023050 | 0.800027 | 1.747484e-48 | -8.615850e-47 |
| Msa0999220 | Msa1023950 | 0.810287 | 1.242699e-50 | -8.615850e-47 |
| Msa0999220 | Msa1030970 | 0.809374 | 1.952890e-50 | -8.615850e-47 |
| Msa0999220 | Msa1036610 | 0.803031 | 4.232773e-49 | -8.615850e-47 |
| Msa0999220 | Msa1040540 | 0.807525 | 4.844427e-50 | -8.615850e-47 |
| Msa0999220 | Msa1046460 | 0.816367 | 5.735782e-52 | -8.615850e-47 |
| Msa0999220 | Msa1052330 | 0.805839 | 1.099898e-49 | -8.615850e-47 |
| Msa0999220 | Msa1054990 | 0.823229 | 1.549603e-53 | -8.615850e-47 |
| Msa0999220 | Msa1070010 | 0.827999 | 1.147318e-54 | -8.615850e-47 |
| Msa0999220 | Msa1075540 | 0.826607 | 2.472943e-54 | -8.615850e-47 |
| Msa0999220 | Msa1075650 | 0.833663 | 4.687180e-56 | -8.615850e-47 |
| Msa0999220 | Msa1081330 | 0.802762 | 4.809567e-49 | -8.615850e-47 |
| Msa0999220 | Msa1082500 | 0.801411 | 9.119690e-49 | -8.615850e-47 |
| Msa0999220 | Msa1083840 | 0.802072 | 6.671977e-49 | -8.615850e-47 |
| Msa0999220 | Msa1094200 | 0.811895 | 5.568697e-51 | -8.615850e-47 |
| Msa0999220 | Msa1104090 | 0.819273 | 1.266176e-52 | -8.615850e-47 |
| Msa0999220 | Msa1112300 | 0.805888 | 1.074114e-49 | -8.615850e-47 |
| Msa0999220 | Msa1113170 | 0.816836 | 4.503901e-52 | -8.615850e-47 |
| Msa0999220 | Msa1121480 | 0.832638 | 8.433081e-56 | -8.615850e-47 |
| Msa0999220 | Msa1121490 | 0.849887 | 2.423460e-60 | -8.615850e-47 |
| Msa0999220 | Msa1136420 | 0.812227 | 4.713839e-51 | -8.615850e-47 |
| Msa0999220 | Msa1137570 | 0.821328 | 4.280638e-53 | -8.615850e-47 |
| Msa0999220 | Msa1144450 | 0.807896 | 4.040610e-50 | -8.615850e-47 |
| Msa0999220 | Msa1147740 | 0.826277 | 2.963745e-54 | -8.615850e-47 |
| Msa0999220 | Msa1156020 | 0.814729 | 1.328363e-51 | -8.615850e-47 |
| Msa0999220 | Msa1178180 | 0.805080 | 1.586336e-49 | -8.615850e-47 |
| Msa0999220 | Msa1185110 | 0.811673 | 6.223377e-51 | -8.615850e-47 |
| Msa0999220 | Msa1190920 | 0.824948 | 6.121037e-54 | -8.615850e-47 |
| Msa0999220 | Msa1195190 | 0.816838 | 4.497944e-52 | -8.615850e-47 |
| Msa0999220 | Msa1204530 | 0.800820 | 1.204397e-48 | -8.615850e-47 |
| Msa0999220 | Msa1205020 | 0.803485 | 3.408552e-49 | -8.615850e-47 |
| Msa0999220 | Msa1232740 | 0.813187 | 2.906710e-51 | -8.615850e-47 |
| Msa0999220 | Msa1236430 | 0.801588 | 8.387873e-49 | -8.615850e-47 |
| Msa0999220 | Msa1243490 | 0.810064 | 1.387710e-50 | -8.615850e-47 |
| Msa0999220 | Msa1248370 | 0.802353 | 5.840416e-49 | -8.615850e-47 |
| Msa0999220 | Msa1253020 | 0.813085 | 3.059861e-51 | -8.615850e-47 |
| Msa0999220 | Msa1263750 | 0.802698 | 4.959659e-49 | -8.615850e-47 |
| Msa0999220 | Msa1263790 | 0.826211 | 3.072073e-54 | -8.615850e-47 |
| Msa0999220 | Msa1277660 | 0.821902 | 3.153081e-53 | -8.615850e-47 |
| Msa0999220 | Msa1284680 | 0.851584 | 8.070853e-61 | -8.615850e-47 |
| Msa0999220 | Msa1286800 | 0.811777 | 5.907636e-51 | -8.615850e-47 |
| Msa0999220 | Msa1305810 | 0.810668 | 1.027941e-50 | -8.615850e-47 |
| Msa0999220 | Msa1306850 | 0.812553 | 4.000523e-51 | -8.615850e-47 |
| Msa0999220 | Msa1308870 | 0.804451 | 2.146837e-49 | -8.615850e-47 |
| Msa0999220 | Msa1309030 | 0.816966 | 4.210329e-52 | -8.615850e-47 |
| Msa0999220 | Msa1313320 | 0.816298 | 5.944364e-52 | -8.615850e-47 |
| Msa0999220 | Msa1331000 | 0.809058 | 2.282235e-50 | -8.615850e-47 |
| Msa0999220 | Msa1353470 | 0.804105 | 2.534296e-49 | -8.615850e-47 |
| Msa0999220 | Msa1359040 | 0.806069 | 9.839606e-50 | -8.615850e-47 |
| Msa0999220 | Msa1366810 | 0.839509 | 1.518861e-57 | -8.615850e-47 |
| Msa0999220 | Msa1372760 | 0.824459 | 7.981297e-54 | -8.615850e-47 |
| Msa0999220 | Msa1373030 | 0.816338 | 5.822384e-52 | -8.615850e-47 |
| Msa0999220 | Msa1374470 | 0.807747 | 4.346202e-50 | -8.615850e-47 |
| Msa0999220 | Msa1388930 | 0.808093 | 3.669310e-50 | -8.615850e-47 |
| Msa0999220 | Msa1390700 | 0.810827 | 9.498773e-51 | -8.615850e-47 |
| Msa0999220 | Msa1392910 | 0.815138 | 1.077727e-51 | -8.615850e-47 |
| Msa0999220 | Msa1394310 | 0.800555 | 1.363977e-48 | -8.615850e-47 |
| Msa0999220 | Msa1403480 | 0.821127 | 4.762039e-53 | -8.615850e-47 |
| Msa0999220 | Msa1410680 | 0.819463 | 1.146082e-52 | -8.615850e-47 |
| Msa0999220 | Msa1411020 | 0.802709 | 4.933706e-49 | -8.615850e-47 |
| Msa0999220 | Msa1415910 | 0.807077 | 6.028190e-50 | -8.615850e-47 |
| Msa0999220 | Msa1419960 | 0.801942 | 7.096980e-49 | -8.615850e-47 |
| Msa0999220 | Msa1420820 | 0.800676 | 1.288944e-48 | -8.615850e-47 |
| Msa0999220 | Msa1427230 | 0.829544 | 4.851967e-55 | -8.615850e-47 |
| Msa0999220 | Msa1439320 | 0.802335 | 5.892275e-49 | -8.615850e-47 |
| Msa0999220 | Msa1443060 | 0.819645 | 1.041932e-52 | -8.615850e-47 |
| Msa0999220 | Msa1451570 | 0.819270 | 1.268410e-52 | -8.615850e-47 |
| Msa0999220 | Msa1458750 | 0.814986 | 1.164939e-51 | -8.615850e-47 |
| Msa0999220 | Msa1460800 | 0.802306 | 5.973221e-49 | -8.615850e-47 |
| Msa0999220 | Msa1460830 | 0.830802 | 2.392485e-55 | -8.615850e-47 |
| Msa0999220 | Msa1466540 | 0.843777 | 1.137322e-58 | -8.615850e-47 |
| Msa0251320 | Msa0999220 | 0.811890 | 5.581630e-51 | -8.615850e-47 |
| Msa0251640 | Msa0999220 | 0.807536 | 4.818788e-50 | -8.615850e-47 |
| Msa0260780 | Msa0999220 | 0.818172 | 2.251320e-52 | -8.615850e-47 |
| Msa0278110 | Msa0999220 | 0.832965 | 6.994288e-56 | -8.615850e-47 |
| Msa0278190 | Msa0999220 | 0.805710 | 1.170265e-49 | -8.615850e-47 |
| Msa0290870 | Msa0999220 | 0.813223 | 2.854196e-51 | -8.615850e-47 |
| Msa0292030 | Msa0999220 | 0.801415 | 9.101104e-49 | -8.615850e-47 |
| Msa0305190 | Msa0999220 | 0.829243 | 5.740250e-55 | -8.615850e-47 |
| Msa0307540 | Msa0999220 | 0.807509 | 4.881468e-50 | -8.615850e-47 |
| Msa0319170 | Msa0999220 | 0.816792 | 4.607174e-52 | -8.615850e-47 |
| Msa0322360 | Msa0999220 | 0.802698 | 4.958833e-49 | -8.615850e-47 |
| Msa0330340 | Msa0999220 | 0.819439 | 1.161069e-52 | -8.615850e-47 |
| Msa0336320 | Msa0999220 | 0.814488 | 1.502179e-51 | -8.615850e-47 |
| Msa0339620 | Msa0999220 | 0.818301 | 2.105450e-52 | -8.615850e-47 |
| Msa0340450 | Msa0999220 | 0.812374 | 4.377712e-51 | -8.615850e-47 |
| Msa0340470 | Msa0999220 | 0.800022 | 1.751105e-48 | -8.615850e-47 |
| Msa0342750 | Msa0999220 | 0.812777 | 3.573777e-51 | -8.615850e-47 |
| Msa0344690 | Msa0999220 | -0.800763 | 1.237388e-48 | -8.615850e-47 |
| Msa0363790 | Msa0999220 | 0.812109 | 5.000698e-51 | -8.615850e-47 |
| Msa0483850 | Msa0999220 | 0.805324 | 1.410712e-49 | -8.615850e-47 |
| Msa0488560 | Msa0999220 | 0.801354 | 9.367208e-49 | -8.615850e-47 |
| Msa0495330 | Msa0999220 | 0.818729 | 1.683560e-52 | -8.615850e-47 |
| Msa0516170 | Msa0999220 | 0.805791 | 1.125327e-49 | -8.615850e-47 |
| Msa0518380 | Msa0999220 | 0.804203 | 2.417348e-49 | -8.615850e-47 |
| Msa0523940 | Msa0999220 | 0.829894 | 3.986226e-55 | -8.615850e-47 |
| Msa0529890 | Msa0999220 | 0.818704 | 1.705913e-52 | -8.615850e-47 |
| Msa0545700 | Msa0999220 | 0.857568 | 1.494084e-62 | -8.615850e-47 |
| Msa0549910 | Msa0999220 | 0.832730 | 8.001050e-56 | -8.615850e-47 |
| Msa0575700 | Msa0999220 | 0.809171 | 2.158427e-50 | -8.615850e-47 |
| Msa0585560 | Msa0999220 | 0.805791 | 1.125679e-49 | -8.615850e-47 |
| Msa0600700 | Msa0999220 | 0.826619 | 2.455747e-54 | -8.615850e-47 |
| Msa0842650 | Msa0999220 | 0.805742 | 1.152733e-49 | -8.615850e-47 |
| Msa0844450 | Msa0999220 | 0.823425 | 1.394965e-53 | -8.615850e-47 |
| Msa0844490 | Msa0999220 | 0.849112 | 3.984813e-60 | -8.615850e-47 |
| Msa0844570 | Msa0999220 | 0.808121 | 3.618729e-50 | -8.615850e-47 |
| Msa0848990 | Msa0999220 | 0.804345 | 2.258966e-49 | -8.615850e-47 |
| Msa0849030 | Msa0999220 | 0.824334 | 8.540873e-54 | -8.615850e-47 |
| Msa0857640 | Msa0999220 | 0.820818 | 5.609709e-53 | -8.615850e-47 |
| Msa0858980 | Msa0999220 | 0.803123 | 4.051787e-49 | -8.615850e-47 |
| Msa0861130 | Msa0999220 | 0.833288 | 5.813023e-56 | -8.615850e-47 |
| Msa0864070 | Msa0999220 | 0.817876 | 2.626258e-52 | -8.615850e-47 |
| Msa0877250 | Msa0999220 | 0.810788 | 9.686079e-51 | -8.615850e-47 |
| Msa0888130 | Msa0999220 | 0.817128 | 3.871354e-52 | -8.615850e-47 |
| Msa0897330 | Msa0999220 | 0.809901 | 1.504584e-50 | -8.615850e-47 |
| Msa0899430 | Msa0999220 | 0.862999 | 3.403596e-64 | -8.615850e-47 |
| Msa0899450 | Msa0999220 | 0.872138 | 4.003835e-67 | -8.615850e-47 |
| Msa0901930 | Msa0999220 | 0.837366 | 5.423656e-57 | -8.615850e-47 |
| Msa0914270 | Msa0999220 | 0.812136 | 4.934962e-51 | -8.615850e-47 |
| Msa0914760 | Msa0999220 | 0.812161 | 4.874068e-51 | -8.615850e-47 |
| Msa0925250 | Msa0999220 | 0.811129 | 8.167880e-51 | -8.615850e-47 |
| Msa0925290 | Msa0999220 | 0.828048 | 1.116277e-54 | -8.615850e-47 |
| Msa0927380 | Msa0999220 | 0.889584 | 2.125403e-73 | -8.615850e-47 |
| Msa0927390 | Msa0999220 | 0.862466 | 4.967738e-64 | -8.615850e-47 |
| Msa0933100 | Msa0999220 | 0.844519 | 7.188162e-59 | -8.615850e-47 |
| Msa0936390 | Msa0999220 | 0.802604 | 5.185190e-49 | -8.615850e-47 |
| Msa0939250 | Msa0999220 | 0.803520 | 3.352069e-49 | -8.615850e-47 |
| Msa0952720 | Msa0999220 | 0.809427 | 1.902124e-50 | -8.615850e-47 |
| Msa0953120 | Msa0999220 | 0.814613 | 1.408913e-51 | -8.615850e-47 |
| Msa0954910 | Msa0999220 | 0.802553 | 5.311553e-49 | -8.615850e-47 |
| Msa0958540 | Msa0999220 | 0.821802 | 3.326551e-53 | -8.615850e-47 |
| Msa0958550 | Msa0999220 | 0.854975 | 8.600075e-62 | -8.615850e-47 |
| Msa0964900 | Msa0999220 | 0.883840 | 3.191463e-71 | -8.615850e-47 |
| Msa0966750 | Msa0999220 | 0.800342 | 1.507667e-48 | -8.615850e-47 |
| Msa0967280 | Msa0999220 | 0.812738 | 3.644868e-51 | -8.615850e-47 |
| Msa0969450 | Msa0999220 | 0.809464 | 1.868435e-50 | -8.615850e-47 |
| Msa0969520 | Msa0999220 | 0.837042 | 6.563911e-57 | -8.615850e-47 |
| Msa0973100 | Msa0999220 | 0.803490 | 3.401097e-49 | -8.615850e-47 |
| Msa0974070 | Msa0999220 | 0.832773 | 7.808816e-56 | -8.615850e-47 |
| Msa0974080 | Msa0999220 | 0.846906 | 1.618351e-59 | -8.615850e-47 |
| Msa0976670 | Msa0999220 | 0.816666 | 4.915694e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0999220 | MtrunA17_Chr6g0485511 | 82.677 | 127 | 12 | 4 | 117 | 238 | 1 | 122 | 3.04e-60 | 185 |
| Msa0999220 | MtrunA17_Chr6g0485551 | 80.808 | 99 | 17 | 2 | 1 | 99 | 1 | 97 | 4.00e-53 | 170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCATTCTCCTGCTGGTT+TGG | 0.290743 | 6_4:+81014654 | None:intergenic |
| TTAGATGTACCTTCTTCATT+TGG | 0.332645 | 6_4:+81014690 | None:intergenic |
| TCAGGACCCACATATAATTA+TGG | 0.337723 | 6_4:-81015940 | Msa0999220:CDS |
| TCAGCCTTCGAAGTTCTTTA+CGG | 0.344809 | 6_4:+81015500 | None:intergenic |
| CTTAAGCTTCATTCTCCTGC+TGG | 0.359038 | 6_4:+81014649 | None:intergenic |
| TTCAATCACTTCATCATAAT+AGG | 0.366272 | 6_4:+81015745 | None:intergenic |
| AATTATGGCAAAAGGAGATC+TGG | 0.371566 | 6_4:-81015925 | Msa0999220:CDS |
| ATTATTGATGAGAAGTTTGC+CGG | 0.385556 | 6_4:+81015894 | None:intergenic |
| AAATGAAGAAGGTACATCTA+AGG | 0.414920 | 6_4:-81014688 | Msa0999220:CDS |
| CCACATCTCAAAACCGCAAA+TGG | 0.423400 | 6_4:-81015242 | Msa0999220:CDS |
| GAAGTGGAAGTGGCGGAAGC+CGG | 0.426962 | 6_4:+81015213 | None:intergenic |
| AAGTGGAAGTGGCGGAAGCC+GGG | 0.428762 | 6_4:+81015214 | None:intergenic |
| TCGTGATTTAAATCAGCATC+AGG | 0.464071 | 6_4:+81015698 | None:intergenic |
| AAGCCGGGTGGAGCCATTTG+CGG | 0.466138 | 6_4:+81015229 | None:intergenic |
| AGAAATCTAAGCCAACTACT+TGG | 0.472779 | 6_4:-81015969 | Msa0999220:CDS |
| ATGCTGAAAACTGCGTGGTT+TGG | 0.474624 | 6_4:-81015556 | Msa0999220:CDS |
| TCGTCAATCACACTGCAAAC+AGG | 0.488932 | 6_4:+81015187 | None:intergenic |
| CCAACTACTTGGGTCATCTC+AGG | 0.497404 | 6_4:-81015958 | Msa0999220:CDS |
| AAACAGGAGGGAAGTGGAAG+TGG | 0.512473 | 6_4:+81015203 | None:intergenic |
| CCACATATAATTATGGCAAA+AGG | 0.513516 | 6_4:-81015933 | Msa0999220:CDS |
| CACTGCAAACAGGAGGGAAG+TGG | 0.520900 | 6_4:+81015197 | None:intergenic |
| AGCTGAAGTTCCAAACCAGC+AGG | 0.526615 | 6_4:-81014664 | Msa0999220:CDS |
| GAAATCTAAGCCAACTACTT+GGG | 0.528517 | 6_4:-81015968 | Msa0999220:CDS |
| CAATAATGATAGAGATCACC+AGG | 0.531064 | 6_4:-81015878 | Msa0999220:intron |
| ATTATGGCAAAAGGAGATCT+GGG | 0.533808 | 6_4:-81015924 | Msa0999220:CDS |
| CCTGAGATGACCCAAGTAGT+TGG | 0.545425 | 6_4:+81015958 | None:intergenic |
| GCTGAAGTTCCAAATGAAGA+AGG | 0.564225 | 6_4:-81014699 | Msa0999220:CDS |
| GAAAACTGCGTGGTTTGGCA+AGG | 0.583493 | 6_4:-81015551 | Msa0999220:CDS |
| CGAACTTTCTGCAGAACCCA+AGG | 0.585785 | 6_4:-81015167 | Msa0999220:intron |
| AAAACTGCGTGGTTTGGCAA+GGG | 0.599527 | 6_4:-81015550 | Msa0999220:CDS |
| AAATTTAAAGAACTTGCCGC+GGG | 0.602711 | 6_4:+81014943 | None:intergenic |
| TAAATTTAAAGAACTTGCCG+CGG | 0.623516 | 6_4:+81014942 | None:intergenic |
| TCAATCACACTGCAAACAGG+AGG | 0.629072 | 6_4:+81015190 | None:intergenic |
| CAGGAGGGAAGTGGAAGTGG+CGG | 0.629148 | 6_4:+81015206 | None:intergenic |
| AAACCGCAAATGGCTCCACC+CGG | 0.634759 | 6_4:-81015232 | Msa0999220:CDS |
| TGGAAGTGGCGGAAGCCGGG+TGG | 0.646475 | 6_4:+81015217 | None:intergenic |
| TGTGTCTGATTTACAACCCG+CGG | 0.653286 | 6_4:-81014959 | Msa0999220:CDS |
| AAAACCGTAAAGAACTTCGA+AGG | 0.659678 | 6_4:-81015504 | Msa0999220:CDS |
| CAATCACACTGCAAACAGGA+GGG | 0.665161 | 6_4:+81015191 | None:intergenic |
| TGATGCTGATTTAAATCACG+AGG | 0.690474 | 6_4:-81015696 | Msa0999220:intron |
| TATTTATGCTGAAAACTGCG+TGG | 0.707815 | 6_4:-81015561 | Msa0999220:CDS |
| TCTTCCACAAATGACTGACG+AGG | 0.728254 | 6_4:-81015992 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATAGAAAATTAATATTAA+AGG | + | chr6_4:81014848-81014867 | None:intergenic | 10.0% |
| !! | GTATAGAAAATTAATATTAA+AGG | + | chr6_4:81014848-81014867 | None:intergenic | 10.0% |
| !! | TTATTAAAGAACTCAAAATA+TGG | + | chr6_4:81015570-81015589 | None:intergenic | 15.0% |
| !! | TTATTAAAGAACTCAAAATA+TGG | + | chr6_4:81015570-81015589 | None:intergenic | 15.0% |
| !! | TTAATATTAAAGGGCTAAAA+CGG | + | chr6_4:81014838-81014857 | None:intergenic | 20.0% |
| !! | AAAGCAAATTAAAAAACATG+AGG | - | chr6_4:81015156-81015175 | Msa0999220:intron | 20.0% |
| !! | TGAAATGTTAACAAAGTTTA+TGG | - | chr6_4:81015500-81015519 | Msa0999220:CDS | 20.0% |
| !! | GAAATGTTAACAAAGTTTAT+GGG | - | chr6_4:81015501-81015520 | Msa0999220:CDS | 20.0% |
| !! | AAATGTTAACAAAGTTTATG+GGG | - | chr6_4:81015502-81015521 | Msa0999220:CDS | 20.0% |
| !!! | ATATGAGCAATAGTAATTTT+AGG | + | chr6_4:81015626-81015645 | None:intergenic | 20.0% |
| !! | TTAATATTAAAGGGCTAAAA+CGG | + | chr6_4:81014838-81014857 | None:intergenic | 20.0% |
| !! | AAAGCAAATTAAAAAACATG+AGG | - | chr6_4:81015156-81015175 | Msa0999220:intron | 20.0% |
| !! | TGAAATGTTAACAAAGTTTA+TGG | - | chr6_4:81015500-81015519 | Msa0999220:CDS | 20.0% |
| !! | GAAATGTTAACAAAGTTTAT+GGG | - | chr6_4:81015501-81015520 | Msa0999220:CDS | 20.0% |
| !! | AAATGTTAACAAAGTTTATG+GGG | - | chr6_4:81015502-81015521 | Msa0999220:CDS | 20.0% |
| !!! | ATATGAGCAATAGTAATTTT+AGG | + | chr6_4:81015626-81015645 | None:intergenic | 20.0% |
| !! | CTTTTGCCATAATTATATGT+GGG | + | chr6_4:81014701-81014720 | None:intergenic | 25.0% |
| ! | TTCAATCACTTCATCATAAT+AGG | + | chr6_4:81014890-81014909 | None:intergenic | 25.0% |
| !!! | AGAAAGAAGCTGATTTTAAA+AGG | - | chr6_4:81015832-81015851 | Msa0999220:intron | 25.0% |
| !!! | GAAAGAAGCTGATTTTAAAA+GGG | - | chr6_4:81015833-81015852 | Msa0999220:intron | 25.0% |
| !! | CTTTTGCCATAATTATATGT+GGG | + | chr6_4:81014701-81014720 | None:intergenic | 25.0% |
| ! | TTCAATCACTTCATCATAAT+AGG | + | chr6_4:81014890-81014909 | None:intergenic | 25.0% |
| !!! | AGAAAGAAGCTGATTTTAAA+AGG | - | chr6_4:81015832-81015851 | Msa0999220:intron | 25.0% |
| !!! | GAAAGAAGCTGATTTTAAAA+GGG | - | chr6_4:81015833-81015852 | Msa0999220:intron | 25.0% |
| ! | CCTTTTGCCATAATTATATG+TGG | + | chr6_4:81014702-81014721 | None:intergenic | 30.0% |
| CCACATATAATTATGGCAAA+AGG | - | chr6_4:81014699-81014718 | Msa0999220:CDS | 30.0% | |
| ATTATTGATGAGAAGTTTGC+CGG | + | chr6_4:81014741-81014760 | None:intergenic | 30.0% | |
| !! | ATAAATAACTGCTGGTTTAG+AGG | + | chr6_4:81015058-81015077 | None:intergenic | 30.0% |
| ! | TTTTCAGCATAAATAACTGC+TGG | + | chr6_4:81015066-81015085 | None:intergenic | 30.0% |
| TCAACTACAATTGATTGAAG+AGG | + | chr6_4:81015236-81015255 | None:intergenic | 30.0% | |
| ATTGCTGAGAATAATGTTGT+CGG | - | chr6_4:81015280-81015299 | Msa0999220:intron | 30.0% | |
| TTCATGAAAAAACTTGCCTT+GGG | + | chr6_4:81015484-81015503 | None:intergenic | 30.0% | |
| TTTCATGAAAAAACTTGCCT+TGG | + | chr6_4:81015485-81015504 | None:intergenic | 30.0% | |
| TAAATTTAAAGAACTTGCCG+CGG | + | chr6_4:81015693-81015712 | None:intergenic | 30.0% | |
| TTAGATGTACCTTCTTCATT+TGG | + | chr6_4:81015945-81015964 | None:intergenic | 30.0% | |
| ! | AAATGAAGAAGGTACATCTA+AGG | - | chr6_4:81015944-81015963 | Msa0999220:CDS | 30.0% |
| ! | CCTTTTGCCATAATTATATG+TGG | + | chr6_4:81014702-81014721 | None:intergenic | 30.0% |
| CCACATATAATTATGGCAAA+AGG | - | chr6_4:81014699-81014718 | Msa0999220:CDS | 30.0% | |
| ATTATTGATGAGAAGTTTGC+CGG | + | chr6_4:81014741-81014760 | None:intergenic | 30.0% | |
| !! | ATAAATAACTGCTGGTTTAG+AGG | + | chr6_4:81015058-81015077 | None:intergenic | 30.0% |
| ! | TTTTCAGCATAAATAACTGC+TGG | + | chr6_4:81015066-81015085 | None:intergenic | 30.0% |
| TCAACTACAATTGATTGAAG+AGG | + | chr6_4:81015236-81015255 | None:intergenic | 30.0% | |
| ATTGCTGAGAATAATGTTGT+CGG | - | chr6_4:81015280-81015299 | Msa0999220:intron | 30.0% | |
| TTCATGAAAAAACTTGCCTT+GGG | + | chr6_4:81015484-81015503 | None:intergenic | 30.0% | |
| TTTCATGAAAAAACTTGCCT+TGG | + | chr6_4:81015485-81015504 | None:intergenic | 30.0% | |
| TAAATTTAAAGAACTTGCCG+CGG | + | chr6_4:81015693-81015712 | None:intergenic | 30.0% | |
| TTAGATGTACCTTCTTCATT+TGG | + | chr6_4:81015945-81015964 | None:intergenic | 30.0% | |
| ! | AAATGAAGAAGGTACATCTA+AGG | - | chr6_4:81015944-81015963 | Msa0999220:CDS | 30.0% |
| AGAAATCTAAGCCAACTACT+TGG | - | chr6_4:81014663-81014682 | Msa0999220:CDS | 35.0% | |
| GAAATCTAAGCCAACTACTT+GGG | - | chr6_4:81014664-81014683 | Msa0999220:CDS | 35.0% | |
| TCAGGACCCACATATAATTA+TGG | - | chr6_4:81014692-81014711 | Msa0999220:CDS | 35.0% | |
| AATTATGGCAAAAGGAGATC+TGG | - | chr6_4:81014707-81014726 | Msa0999220:CDS | 35.0% | |
| ATTATGGCAAAAGGAGATCT+GGG | - | chr6_4:81014708-81014727 | Msa0999220:CDS | 35.0% | |
| CAATAATGATAGAGATCACC+AGG | - | chr6_4:81014754-81014773 | Msa0999220:CDS | 35.0% | |
| ACGATCAAAAAAATCATGCC+TGG | + | chr6_4:81014775-81014794 | None:intergenic | 35.0% | |
| AGGAATCAAAAAACTTCTGC+AGG | + | chr6_4:81014870-81014889 | None:intergenic | 35.0% | |
| TCGTGATTTAAATCAGCATC+AGG | + | chr6_4:81014937-81014956 | None:intergenic | 35.0% | |
| !! | TGATGCTGATTTAAATCACG+AGG | - | chr6_4:81014936-81014955 | Msa0999220:intron | 35.0% |
| TATTTATGCTGAAAACTGCG+TGG | - | chr6_4:81015071-81015090 | Msa0999220:intron | 35.0% | |
| ! | TCGAAGTTCTTTACGGTTTT+TGG | + | chr6_4:81015128-81015147 | None:intergenic | 35.0% |
| AAAACCGTAAAGAACTTCGA+AGG | - | chr6_4:81015128-81015147 | Msa0999220:intron | 35.0% | |
| GATTGAAGAGGAAAACAAGA+AGG | + | chr6_4:81015224-81015243 | None:intergenic | 35.0% | |
| GAGAATAATGTTGTCGGATT+CGG | - | chr6_4:81015286-81015305 | Msa0999220:intron | 35.0% | |
| AGAATAATGTTGTCGGATTC+GGG | - | chr6_4:81015287-81015306 | Msa0999220:intron | 35.0% | |
| ! | TTTTAGGCTTCAATTTCTGC+TGG | + | chr6_4:81015610-81015629 | None:intergenic | 35.0% |
| AAATTTAAAGAACTTGCCGC+GGG | + | chr6_4:81015692-81015711 | None:intergenic | 35.0% | |
| !! | CTGCTTTTCAATTTCATCGA+GGG | + | chr6_4:81015814-81015833 | None:intergenic | 35.0% |
| !! | TCTGCTTTTCAATTTCATCG+AGG | + | chr6_4:81015815-81015834 | None:intergenic | 35.0% |
| AGATGAAAAAGCTGCATCTA+AGG | - | chr6_4:81015902-81015921 | Msa0999220:CDS | 35.0% | |
| AGAAATCTAAGCCAACTACT+TGG | - | chr6_4:81014663-81014682 | Msa0999220:CDS | 35.0% | |
| GAAATCTAAGCCAACTACTT+GGG | - | chr6_4:81014664-81014683 | Msa0999220:CDS | 35.0% | |
| TCAGGACCCACATATAATTA+TGG | - | chr6_4:81014692-81014711 | Msa0999220:CDS | 35.0% | |
| AATTATGGCAAAAGGAGATC+TGG | - | chr6_4:81014707-81014726 | Msa0999220:CDS | 35.0% | |
| ATTATGGCAAAAGGAGATCT+GGG | - | chr6_4:81014708-81014727 | Msa0999220:CDS | 35.0% | |
| CAATAATGATAGAGATCACC+AGG | - | chr6_4:81014754-81014773 | Msa0999220:CDS | 35.0% | |
| ACGATCAAAAAAATCATGCC+TGG | + | chr6_4:81014775-81014794 | None:intergenic | 35.0% | |
| AGGAATCAAAAAACTTCTGC+AGG | + | chr6_4:81014870-81014889 | None:intergenic | 35.0% | |
| TCGTGATTTAAATCAGCATC+AGG | + | chr6_4:81014937-81014956 | None:intergenic | 35.0% | |
| !! | TGATGCTGATTTAAATCACG+AGG | - | chr6_4:81014936-81014955 | Msa0999220:intron | 35.0% |
| TATTTATGCTGAAAACTGCG+TGG | - | chr6_4:81015071-81015090 | Msa0999220:intron | 35.0% | |
| ! | TCGAAGTTCTTTACGGTTTT+TGG | + | chr6_4:81015128-81015147 | None:intergenic | 35.0% |
| AAAACCGTAAAGAACTTCGA+AGG | - | chr6_4:81015128-81015147 | Msa0999220:intron | 35.0% | |
| GATTGAAGAGGAAAACAAGA+AGG | + | chr6_4:81015224-81015243 | None:intergenic | 35.0% | |
| GAGAATAATGTTGTCGGATT+CGG | - | chr6_4:81015286-81015305 | Msa0999220:intron | 35.0% | |
| AGAATAATGTTGTCGGATTC+GGG | - | chr6_4:81015287-81015306 | Msa0999220:intron | 35.0% | |
| ! | TTTTAGGCTTCAATTTCTGC+TGG | + | chr6_4:81015610-81015629 | None:intergenic | 35.0% |
| AAATTTAAAGAACTTGCCGC+GGG | + | chr6_4:81015692-81015711 | None:intergenic | 35.0% | |
| !! | CTGCTTTTCAATTTCATCGA+GGG | + | chr6_4:81015814-81015833 | None:intergenic | 35.0% |
| !! | TCTGCTTTTCAATTTCATCG+AGG | + | chr6_4:81015815-81015834 | None:intergenic | 35.0% |
| AGATGAAAAAGCTGCATCTA+AGG | - | chr6_4:81015902-81015921 | Msa0999220:CDS | 35.0% | |
| !!! | ATGAGAAGTTTGCCGGTTTT+TGG | + | chr6_4:81014734-81014753 | None:intergenic | 40.0% |
| TCAGCCTTCGAAGTTCTTTA+CGG | + | chr6_4:81015135-81015154 | None:intergenic | 40.0% | |
| GAATAATGTTGTCGGATTCG+GGG | - | chr6_4:81015288-81015307 | Msa0999220:intron | 40.0% | |
| AATAATGTTGTCGGATTCGG+GGG | - | chr6_4:81015289-81015308 | Msa0999220:intron | 40.0% | |
| TTAACCTCTAAACCAGCAGT+TGG | - | chr6_4:81015764-81015783 | Msa0999220:intron | 40.0% | |
| GCTGAAGTTCCAAATGAAGA+AGG | - | chr6_4:81015933-81015952 | Msa0999220:CDS | 40.0% | |
| !!! | ATGAGAAGTTTGCCGGTTTT+TGG | + | chr6_4:81014734-81014753 | None:intergenic | 40.0% |
| TCAGCCTTCGAAGTTCTTTA+CGG | + | chr6_4:81015135-81015154 | None:intergenic | 40.0% | |
| GAATAATGTTGTCGGATTCG+GGG | - | chr6_4:81015288-81015307 | Msa0999220:intron | 40.0% | |
| AATAATGTTGTCGGATTCGG+GGG | - | chr6_4:81015289-81015308 | Msa0999220:intron | 40.0% | |
| TTAACCTCTAAACCAGCAGT+TGG | - | chr6_4:81015764-81015783 | Msa0999220:intron | 40.0% | |
| GCTGAAGTTCCAAATGAAGA+AGG | - | chr6_4:81015933-81015952 | Msa0999220:CDS | 40.0% | |
| ATGCTGAAAACTGCGTGGTT+TGG | - | chr6_4:81015076-81015095 | Msa0999220:intron | 45.0% | |
| ! | AAAACTGCGTGGTTTGGCAA+GGG | - | chr6_4:81015082-81015101 | Msa0999220:intron | 45.0% |
| ATGTGGCAGTTAAACTGCAG+AGG | + | chr6_4:81015376-81015395 | None:intergenic | 45.0% | |
| !!! | CCATTTGCGGTTTTGAGATG+TGG | + | chr6_4:81015393-81015412 | None:intergenic | 45.0% |
| CCACATCTCAAAACCGCAAA+TGG | - | chr6_4:81015390-81015409 | Msa0999220:intron | 45.0% | |
| CAATCACACTGCAAACAGGA+GGG | + | chr6_4:81015444-81015463 | None:intergenic | 45.0% | |
| TCAATCACACTGCAAACAGG+AGG | + | chr6_4:81015445-81015464 | None:intergenic | 45.0% | |
| TCGTCAATCACACTGCAAAC+AGG | + | chr6_4:81015448-81015467 | None:intergenic | 45.0% | |
| TGTGTCTGATTTACAACCCG+CGG | - | chr6_4:81015673-81015692 | Msa0999220:intron | 45.0% | |
| !! | AACTCCAACTGCTGGTTTAG+AGG | + | chr6_4:81015771-81015790 | None:intergenic | 45.0% |
| CATACAACAACTCCAACTGC+TGG | + | chr6_4:81015779-81015798 | None:intergenic | 45.0% | |
| ATGCTGAAAACTGCGTGGTT+TGG | - | chr6_4:81015076-81015095 | Msa0999220:intron | 45.0% | |
| ! | AAAACTGCGTGGTTTGGCAA+GGG | - | chr6_4:81015082-81015101 | Msa0999220:intron | 45.0% |
| ATGTGGCAGTTAAACTGCAG+AGG | + | chr6_4:81015376-81015395 | None:intergenic | 45.0% | |
| !!! | CCATTTGCGGTTTTGAGATG+TGG | + | chr6_4:81015393-81015412 | None:intergenic | 45.0% |
| CCACATCTCAAAACCGCAAA+TGG | - | chr6_4:81015390-81015409 | Msa0999220:intron | 45.0% | |
| CAATCACACTGCAAACAGGA+GGG | + | chr6_4:81015444-81015463 | None:intergenic | 45.0% | |
| TCAATCACACTGCAAACAGG+AGG | + | chr6_4:81015445-81015464 | None:intergenic | 45.0% | |
| TCGTCAATCACACTGCAAAC+AGG | + | chr6_4:81015448-81015467 | None:intergenic | 45.0% | |
| TGTGTCTGATTTACAACCCG+CGG | - | chr6_4:81015673-81015692 | Msa0999220:intron | 45.0% | |
| !! | AACTCCAACTGCTGGTTTAG+AGG | + | chr6_4:81015771-81015790 | None:intergenic | 45.0% |
| CATACAACAACTCCAACTGC+TGG | + | chr6_4:81015779-81015798 | None:intergenic | 45.0% | |
| !! | TATAGAAAATTAATATTAAA+GGG | + | chr6_4:81014847-81014866 | None:intergenic | 5.0% |
| !! | TATAGAAAATTAATATTAAA+GGG | + | chr6_4:81014847-81014866 | None:intergenic | 5.0% |
| CCTGAGATGACCCAAGTAGT+TGG | + | chr6_4:81014677-81014696 | None:intergenic | 50.0% | |
| CCAACTACTTGGGTCATCTC+AGG | - | chr6_4:81014674-81014693 | Msa0999220:CDS | 50.0% | |
| AGGAGATCTGGGCCAAAAAC+CGG | - | chr6_4:81014719-81014738 | Msa0999220:CDS | 50.0% | |
| ! | GAAAACTGCGTGGTTTGGCA+AGG | - | chr6_4:81015081-81015100 | Msa0999220:intron | 50.0% |
| TTGTCGGATTCGGGGGTTTA+GGG | - | chr6_4:81015296-81015315 | Msa0999220:intron | 50.0% | |
| AAACAGGAGGGAAGTGGAAG+TGG | + | chr6_4:81015432-81015451 | None:intergenic | 50.0% | |
| CGAACTTTCTGCAGAACCCA+AGG | - | chr6_4:81015465-81015484 | Msa0999220:intron | 50.0% | |
| TGGAGTTGTTGTATGCAGCG+CGG | - | chr6_4:81015784-81015803 | Msa0999220:intron | 50.0% | |
| AGCTGAAGTTCCAAACCAGC+AGG | - | chr6_4:81015968-81015987 | Msa0999220:CDS | 50.0% | |
| ! | GCTTCATTCTCCTGCTGGTT+TGG | + | chr6_4:81015981-81016000 | None:intergenic | 50.0% |
| CCTGAGATGACCCAAGTAGT+TGG | + | chr6_4:81014677-81014696 | None:intergenic | 50.0% | |
| CCAACTACTTGGGTCATCTC+AGG | - | chr6_4:81014674-81014693 | Msa0999220:CDS | 50.0% | |
| AGGAGATCTGGGCCAAAAAC+CGG | - | chr6_4:81014719-81014738 | Msa0999220:CDS | 50.0% | |
| ! | GAAAACTGCGTGGTTTGGCA+AGG | - | chr6_4:81015081-81015100 | Msa0999220:intron | 50.0% |
| TTGTCGGATTCGGGGGTTTA+GGG | - | chr6_4:81015296-81015315 | Msa0999220:intron | 50.0% | |
| AAACAGGAGGGAAGTGGAAG+TGG | + | chr6_4:81015432-81015451 | None:intergenic | 50.0% | |
| CGAACTTTCTGCAGAACCCA+AGG | - | chr6_4:81015465-81015484 | Msa0999220:intron | 50.0% | |
| TGGAGTTGTTGTATGCAGCG+CGG | - | chr6_4:81015784-81015803 | Msa0999220:intron | 50.0% | |
| AGCTGAAGTTCCAAACCAGC+AGG | - | chr6_4:81015968-81015987 | Msa0999220:CDS | 50.0% | |
| ! | GCTTCATTCTCCTGCTGGTT+TGG | + | chr6_4:81015981-81016000 | None:intergenic | 50.0% |
| GTTGTCGGATTCGGGGGTTT+AGG | - | chr6_4:81015295-81015314 | Msa0999220:intron | 55.0% | |
| AAACCGCAAATGGCTCCACC+CGG | - | chr6_4:81015400-81015419 | Msa0999220:intron | 55.0% | |
| CACTGCAAACAGGAGGGAAG+TGG | + | chr6_4:81015438-81015457 | None:intergenic | 55.0% | |
| GTTGTCGGATTCGGGGGTTT+AGG | - | chr6_4:81015295-81015314 | Msa0999220:intron | 55.0% | |
| AAACCGCAAATGGCTCCACC+CGG | - | chr6_4:81015400-81015419 | Msa0999220:intron | 55.0% | |
| CACTGCAAACAGGAGGGAAG+TGG | + | chr6_4:81015438-81015457 | None:intergenic | 55.0% | |
| AAGCCGGGTGGAGCCATTTG+CGG | + | chr6_4:81015406-81015425 | None:intergenic | 60.0% | |
| ! | AAGTGGAAGTGGCGGAAGCC+GGG | + | chr6_4:81015421-81015440 | None:intergenic | 60.0% |
| ! | GAAGTGGAAGTGGCGGAAGC+CGG | + | chr6_4:81015422-81015441 | None:intergenic | 60.0% |
| CAGGAGGGAAGTGGAAGTGG+CGG | + | chr6_4:81015429-81015448 | None:intergenic | 60.0% | |
| AAGCCGGGTGGAGCCATTTG+CGG | + | chr6_4:81015406-81015425 | None:intergenic | 60.0% | |
| ! | AAGTGGAAGTGGCGGAAGCC+GGG | + | chr6_4:81015421-81015440 | None:intergenic | 60.0% |
| ! | GAAGTGGAAGTGGCGGAAGC+CGG | + | chr6_4:81015422-81015441 | None:intergenic | 60.0% |
| CAGGAGGGAAGTGGAAGTGG+CGG | + | chr6_4:81015429-81015448 | None:intergenic | 60.0% | |
| ! | TGGAAGTGGCGGAAGCCGGG+TGG | + | chr6_4:81015418-81015437 | None:intergenic | 70.0% |
| ! | TGGAAGTGGCGGAAGCCGGG+TGG | + | chr6_4:81015418-81015437 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 81014650 | 81016004 | 81014650 | ID=Msa0999220;Name=Msa0999220 |
| chr6_4 | mRNA | 81014650 | 81016004 | 81014650 | ID=Msa0999220-mRNA-1;Parent=Msa0999220;Name=Msa0999220-mRNA-1;_AED=0.25;_eAED=0.26;_QI=0|0|0|0.83|1|1|6|0|238 |
| chr6_4 | exon | 81015879 | 81016004 | 81015879 | ID=Msa0999220-mRNA-1:exon:15501;Parent=Msa0999220-mRNA-1 |
| chr6_4 | exon | 81015697 | 81015780 | 81015697 | ID=Msa0999220-mRNA-1:exon:15500;Parent=Msa0999220-mRNA-1 |
| chr6_4 | exon | 81015477 | 81015587 | 81015477 | ID=Msa0999220-mRNA-1:exon:15499;Parent=Msa0999220-mRNA-1 |
| chr6_4 | exon | 81015168 | 81015272 | 81015168 | ID=Msa0999220-mRNA-1:exon:15498;Parent=Msa0999220-mRNA-1 |
| chr6_4 | exon | 81014956 | 81015043 | 81014956 | ID=Msa0999220-mRNA-1:exon:15497;Parent=Msa0999220-mRNA-1 |
| chr6_4 | exon | 81014650 | 81014852 | 81014650 | ID=Msa0999220-mRNA-1:exon:15496;Parent=Msa0999220-mRNA-1 |
| chr6_4 | CDS | 81015879 | 81016004 | 81015879 | ID=Msa0999220-mRNA-1:cds;Parent=Msa0999220-mRNA-1 |
| chr6_4 | CDS | 81015697 | 81015780 | 81015697 | ID=Msa0999220-mRNA-1:cds;Parent=Msa0999220-mRNA-1 |
| chr6_4 | CDS | 81015477 | 81015587 | 81015477 | ID=Msa0999220-mRNA-1:cds;Parent=Msa0999220-mRNA-1 |
| chr6_4 | CDS | 81015168 | 81015272 | 81015168 | ID=Msa0999220-mRNA-1:cds;Parent=Msa0999220-mRNA-1 |
| chr6_4 | CDS | 81014956 | 81015043 | 81014956 | ID=Msa0999220-mRNA-1:cds;Parent=Msa0999220-mRNA-1 |
| chr6_4 | CDS | 81014650 | 81014852 | 81014650 | ID=Msa0999220-mRNA-1:cds;Parent=Msa0999220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
