Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045100 | XP_003621585.1 | 95.413 | 109 | 5 | 0 | 1 | 109 | 1 | 109 | 3.91e-66 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045100 | sp|Q9LF37|CLPB3_ARATH | 74.038 | 104 | 27 | 0 | 215 | 318 | 859 | 962 | 1.07e-44 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045100 | A2Q633 | 95.413 | 109 | 5 | 0 | 1 | 109 | 1 | 109 | 1.87e-66 | 224 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012740 | Msa1045100 | 0.810144 | 1.334189e-50 | -8.615850e-47 |
| Msa0021980 | Msa1045100 | 0.807414 | 5.113918e-50 | -8.615850e-47 |
| Msa0053480 | Msa1045100 | 0.807971 | 3.894539e-50 | -8.615850e-47 |
| Msa0064440 | Msa1045100 | 0.849697 | 2.738776e-60 | -8.615850e-47 |
| Msa0091000 | Msa1045100 | 0.803228 | 3.853557e-49 | -8.615850e-47 |
| Msa0633720 | Msa1045100 | 0.806081 | 9.780246e-50 | -8.615850e-47 |
| Msa0635470 | Msa1045100 | 0.816090 | 6.616514e-52 | -8.615850e-47 |
| Msa0641020 | Msa1045100 | 0.812680 | 3.754066e-51 | -8.615850e-47 |
| Msa0657860 | Msa1045100 | 0.831722 | 1.421265e-55 | -8.615850e-47 |
| Msa0685880 | Msa1045100 | 0.817712 | 2.860745e-52 | -8.615850e-47 |
| Msa0733370 | Msa1045100 | 0.820543 | 6.490140e-53 | -8.615850e-47 |
| Msa0778580 | Msa1045100 | 0.812098 | 5.028423e-51 | -8.615850e-47 |
| Msa0181410 | Msa1045100 | 0.826340 | 2.861806e-54 | -8.615850e-47 |
| Msa0213090 | Msa1045100 | 0.800116 | 1.676051e-48 | -8.615850e-47 |
| Msa0221940 | Msa1045100 | 0.818623 | 1.779747e-52 | -8.615850e-47 |
| Msa0365360 | Msa1045100 | 0.845636 | 3.588635e-59 | -8.615850e-47 |
| Msa0440110 | Msa1045100 | 0.834088 | 3.669291e-56 | -8.615850e-47 |
| Msa1045100 | Msa1070830 | 0.801361 | 9.335871e-49 | -8.615850e-47 |
| Msa1045100 | Msa1108780 | 0.828649 | 7.993507e-55 | -8.615850e-47 |
| Msa1045100 | Msa1173480 | 0.812227 | 4.713669e-51 | -8.615850e-47 |
| Msa1045100 | Msa1204390 | 0.806380 | 8.459635e-50 | -8.615850e-47 |
| Msa1045100 | Msa1211020 | 0.813208 | 2.875469e-51 | -8.615850e-47 |
| Msa1045100 | Msa1229710 | 0.824186 | 9.253534e-54 | -8.615850e-47 |
| Msa1045100 | Msa1244300 | 0.831915 | 1.273135e-55 | -8.615850e-47 |
| Msa1045100 | Msa1264140 | 0.808814 | 2.574704e-50 | -8.615850e-47 |
| Msa1045100 | Msa1310140 | 0.828852 | 7.140423e-55 | -8.615850e-47 |
| Msa0251140 | Msa1045100 | 0.834752 | 2.498662e-56 | -8.615850e-47 |
| Msa0330400 | Msa1045100 | 0.802207 | 6.260502e-49 | -8.615850e-47 |
| Msa0498920 | Msa1045100 | 0.812819 | 3.499682e-51 | -8.615850e-47 |
| Msa0535020 | Msa1045100 | 0.815807 | 7.650245e-52 | -8.615850e-47 |
| Msa0535050 | Msa1045100 | 0.820160 | 7.943666e-53 | -8.615850e-47 |
| Msa0540840 | Msa1045100 | 0.812336 | 4.462507e-51 | -8.615850e-47 |
| Msa0589610 | Msa1045100 | 0.803077 | 4.139962e-49 | -8.615850e-47 |
| Msa0591780 | Msa1045100 | 0.801713 | 7.909002e-49 | -8.615850e-47 |
| Msa0883660 | Msa1045100 | 0.807731 | 4.379461e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045100 | MtrunA17_Chr7g0220421 | 95.413 | 109 | 5 | 0 | 1 | 109 | 1 | 109 | 3.60e-70 | 224 |
| Msa1045100 | MtrunA17_Chr7g0218421 | 93.750 | 112 | 7 | 0 | 215 | 326 | 866 | 977 | 3.85e-63 | 215 |
| Msa1045100 | MtrunA17_Chr3g0127401 | 90.526 | 95 | 8 | 1 | 101 | 195 | 260 | 353 | 7.01e-53 | 178 |
| Msa1045100 | MtrunA17_Chr6g0454071 | 80.851 | 94 | 18 | 0 | 215 | 308 | 862 | 955 | 2.18e-44 | 162 |
| Msa1045100 | MtrunA17_Chr3g0127431 | 75.281 | 89 | 21 | 1 | 105 | 193 | 266 | 353 | 7.21e-39 | 142 |
| Msa1045100 | MtrunA17_Chr3g0137071 | 50.000 | 96 | 48 | 0 | 215 | 310 | 875 | 970 | 6.61e-25 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1045100 | AT5G15450.1 | 74.038 | 104 | 27 | 0 | 215 | 318 | 859 | 962 | 1.09e-45 | 166 |
| Msa1045100 | AT5G15710.1 | 82.895 | 76 | 13 | 0 | 34 | 109 | 43 | 118 | 1.32e-35 | 134 |
| Msa1045100 | AT5G15710.2 | 82.895 | 76 | 13 | 0 | 34 | 109 | 43 | 118 | 1.32e-35 | 134 |
| Msa1045100 | AT4G27680.1 | 61.702 | 94 | 35 | 1 | 105 | 197 | 263 | 356 | 2.43e-31 | 122 |
| Msa1045100 | AT5G53540.1 | 52.830 | 106 | 50 | 0 | 105 | 210 | 266 | 371 | 2.05e-29 | 116 |
| Msa1045100 | AT2G25140.1 | 50.000 | 98 | 43 | 1 | 215 | 312 | 866 | 957 | 4.55e-23 | 100 |
Find 73 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGGGAAATCTTCTGAATT+AGG | 0.184813 | 7_2:+4279967 | Msa1045100:CDS |
| ACCTTTGTCGCAGGCAGATT+TGG | 0.261206 | 7_2:+4282034 | Msa1045100:CDS |
| ACTGGCCTAGCTCCATAGTT+AGG | 0.268814 | 7_2:-4282944 | None:intergenic |
| GATGCTGCCATCCAACTTCT+TGG | 0.315240 | 7_2:+4282905 | Msa1045100:CDS |
| TTATGCAGTATTTCTCTAAT+AGG | 0.315812 | 7_2:-4281666 | None:intergenic |
| GCTTCTCCTCCAAGGGGAAA+TGG | 0.361590 | 7_2:+4280060 | Msa1045100:CDS |
| TTAGAGAAAATGGATTGTAT+AGG | 0.382196 | 7_2:+4279949 | None:intergenic |
| CTTGATCCATTTCCCCTTGG+AGG | 0.397956 | 7_2:-4280066 | None:intergenic |
| TAGAGAAAATGGATTGTATA+GGG | 0.406016 | 7_2:+4279950 | None:intergenic |
| ATCCTAAGCTTCCAAGAAGT+TGG | 0.422927 | 7_2:-4282916 | None:intergenic |
| TAGGGAAATCTTCTGAATTA+GGG | 0.432644 | 7_2:+4279968 | Msa1045100:CDS |
| GAAGAAACACATGCTACATT+TGG | 0.435966 | 7_2:+4280177 | Msa1045100:CDS |
| TTCAGATGGAGGATAACATA+TGG | 0.436237 | 7_2:+4280220 | Msa1045100:CDS |
| TTAGGATATGACCCTAACTA+TGG | 0.439348 | 7_2:+4282932 | Msa1045100:CDS |
| TTGCTGTGGAAGTTGATTGT+TGG | 0.442232 | 7_2:-4283077 | None:intergenic |
| ATCCAACTTCTTGGAAGCTT+AGG | 0.446196 | 7_2:+4282914 | Msa1045100:CDS |
| ATCTACACCGCAAGAAAGCC+TGG | 0.463020 | 7_2:+4283135 | Msa1045100:CDS |
| TTCCTTGATCCATTTCCCCT+TGG | 0.464201 | 7_2:-4280069 | None:intergenic |
| CAATGGGTCGCGTCGGGTCG+AGG | 0.468949 | 7_2:+4280100 | Msa1045100:CDS |
| TACTGCATAATGAGAAGAAA+GGG | 0.472605 | 7_2:+4281679 | Msa1045100:CDS |
| TCTATTTGATCTTTGCAAGA+AGG | 0.478539 | 7_2:+4281632 | Msa1045100:CDS |
| TCCAAATCTGCCTGCGACAA+AGG | 0.478965 | 7_2:-4282035 | None:intergenic |
| GTTTCTTCATCTAAACCCCT+TGG | 0.480699 | 7_2:-4280162 | None:intergenic |
| ATGTCTTCCGTGAAGTAGAA+AGG | 0.485911 | 7_2:-4282064 | None:intergenic |
| TGCATGAAATTCTGAGCAAA+AGG | 0.486605 | 7_2:-4282405 | None:intergenic |
| TACGAGTCCTTCAAGGCAAA+AGG | 0.487074 | 7_2:+4280125 | Msa1045100:CDS |
| ATAGATTTCAGTTACATAGC+TGG | 0.489383 | 7_2:+4281582 | Msa1045100:CDS |
| AAATCTTCTGAATTAGGGTC+TGG | 0.498237 | 7_2:+4279973 | Msa1045100:CDS |
| CTAGTCCAATGGGTCGCGTC+GGG | 0.499895 | 7_2:+4280094 | Msa1045100:CDS |
| TCTGCCTGCGACAAAGGTCT+AGG | 0.503149 | 7_2:-4282029 | None:intergenic |
| ATACTGCATAATGAGAAGAA+AGG | 0.503244 | 7_2:+4281678 | Msa1045100:CDS |
| TTCTCCTCTCAGAATACCCT+TGG | 0.507087 | 7_2:-4283005 | None:intergenic |
| ATCTCATGCAACAAATCCTC+AGG | 0.513038 | 7_2:-4280252 | None:intergenic |
| TTTGTCGCAGGCAGATTTGG+AGG | 0.513638 | 7_2:+4282037 | Msa1045100:CDS |
| TACATAGCTGGTTTATGCAA+GGG | 0.514055 | 7_2:+4281594 | Msa1045100:CDS |
| GGATGGCAGCATCTGTCACC+TGG | 0.517832 | 7_2:-4282895 | None:intergenic |
| AGATCGCAAGATGAAAATCC+AGG | 0.518725 | 7_2:+4282877 | Msa1045100:CDS |
| CTGGCCTAGCTCCATAGTTA+GGG | 0.521595 | 7_2:-4282943 | None:intergenic |
| TCAAGGAATACTAGTCCAAT+GGG | 0.522157 | 7_2:+4280084 | Msa1045100:CDS |
| CTCGACCCGACGCGACCCAT+TGG | 0.525522 | 7_2:-4280099 | None:intergenic |
| CGAGGAATACGAGTCCTTCA+AGG | 0.527204 | 7_2:+4280118 | Msa1045100:CDS |
| CTCCAAGGGGAAATGGATCA+AGG | 0.529388 | 7_2:+4280067 | Msa1045100:CDS |
| AAGCTTGTGAAGAATGCTCC+AGG | 0.535011 | 7_2:-4283153 | None:intergenic |
| AGGAGGCCCTTTCTACTTCA+CGG | 0.535047 | 7_2:+4282057 | Msa1045100:CDS |
| TTAGGGTCTGGTGTTAGTAT+TGG | 0.537645 | 7_2:+4279985 | Msa1045100:CDS |
| GGTTTATGCAAGGGTTACAC+TGG | 0.540877 | 7_2:+4281603 | Msa1045100:CDS |
| TTACATAGCTGGTTTATGCA+AGG | 0.545650 | 7_2:+4281593 | Msa1045100:CDS |
| GTCGCAGGCAGATTTGGAGG+AGG | 0.548812 | 7_2:+4282040 | Msa1045100:CDS |
| TCAGATGGAGGATAACATAT+GGG | 0.551921 | 7_2:+4280221 | Msa1045100:CDS |
| TGTCTTCCGTGAAGTAGAAA+GGG | 0.552801 | 7_2:-4282063 | None:intergenic |
| GTATACAAGCTTCTCCTCCA+AGG | 0.552869 | 7_2:+4280052 | Msa1045100:CDS |
| ATCAAGGAATACTAGTCCAA+TGG | 0.562043 | 7_2:+4280083 | Msa1045100:CDS |
| TATACAAGCTTCTCCTCCAA+GGG | 0.568208 | 7_2:+4280053 | Msa1045100:CDS |
| GGTTATCTTAAAGGGCGAGA+AGG | 0.568954 | 7_2:+4281548 | Msa1045100:intron |
| ACTAGTCCAATGGGTCGCGT+CGG | 0.570903 | 7_2:+4280093 | Msa1045100:CDS |
| TGTGGAGAATGAACTTGCCA+AGG | 0.574061 | 7_2:+4282988 | Msa1045100:CDS |
| GGTTGTTAAGACTAAACCAA+GGG | 0.578010 | 7_2:+4280146 | Msa1045100:CDS |
| GGAACCTAGACCTTTGTCGC+AGG | 0.591455 | 7_2:+4282025 | Msa1045100:intron |
| GAGAGGAGAATTTAAAGATG+AGG | 0.592198 | 7_2:+4283018 | Msa1045100:CDS |
| ATGACCCTAACTATGGAGCT+AGG | 0.595289 | 7_2:+4282939 | Msa1045100:CDS |
| AAGAGTGATTCAGCAAAATG+TGG | 0.597514 | 7_2:+4282970 | Msa1045100:CDS |
| GAATGCTCCAGGCTTTCTTG+CGG | 0.598691 | 7_2:-4283142 | None:intergenic |
| AGTTCATGCTGATATTCAGA+TGG | 0.607798 | 7_2:+4280206 | Msa1045100:CDS |
| TAAGCTTCCAAGAAGTTGGA+TGG | 0.608541 | 7_2:-4282912 | None:intergenic |
| TTCTACTTCACGGAAGACAT+CGG | 0.618730 | 7_2:+4282067 | Msa1045100:CDS |
| TCATGCTGATATTCAGATGG+AGG | 0.638526 | 7_2:+4280209 | Msa1045100:CDS |
| GTGGAGAATGAACTTGCCAA+GGG | 0.652332 | 7_2:+4282989 | Msa1045100:CDS |
| CATATGGGCTATGTTGCCTG+AGG | 0.667267 | 7_2:+4280236 | Msa1045100:CDS |
| ACTGCATAATGAGAAGAAAG+GGG | 0.674597 | 7_2:+4281680 | Msa1045100:CDS |
| AGGTTGTTAAGACTAAACCA+AGG | 0.680360 | 7_2:+4280145 | Msa1045100:CDS |
| CTTGCCAAGGGTATTCTGAG+AGG | 0.680794 | 7_2:+4283001 | Msa1045100:CDS |
| GTTGTTAAGACTAAACCAAG+GGG | 0.704700 | 7_2:+4280147 | Msa1045100:CDS |
| ATACAAGCTTCTCCTCCAAG+GGG | 0.713925 | 7_2:+4280054 | Msa1045100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGGTATAAATTTTTTATAAT+TGG | - | chr7_2:4280483-4280502 | None:intergenic | 10.0% |
| !!! | TTTTAATAATTTTTTGAGTT+TGG | - | chr7_2:4280924-4280943 | None:intergenic | 10.0% |
| !! | CTCAAAAAATTATTAAAAAA+AGG | + | chr7_2:4280926-4280945 | Msa1045100:intron | 10.0% |
| !! | CAAAAAATTATTAAAAAAAG+GGG | + | chr7_2:4280928-4280947 | Msa1045100:intron | 10.0% |
| !! | NNNNNNNTTAATGACATGTT+TGG | + | chr7_2:4280390-4280409 | Msa1045100:intron | 15.0% |
| !!! | ATAAAATTTTGAAAACTGTA+AGG | - | chr7_2:4280434-4280453 | None:intergenic | 15.0% |
| !!! | TTAACATTGTTGTATATTTT+AGG | - | chr7_2:4280581-4280600 | None:intergenic | 15.0% |
| !! | AAATGTAAAGTTACTAAAAT+AGG | - | chr7_2:4280804-4280823 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTTTTGTAAGC+CGG | + | chr7_2:4280830-4280849 | Msa1045100:intron | 15.0% |
| !! | AAAAGAGAATGAAAAATAAA+AGG | + | chr7_2:4281003-4281022 | Msa1045100:intron | 15.0% |
| !! | AAAGAGAATGAAAAATAAAA+GGG | + | chr7_2:4281004-4281023 | Msa1045100:intron | 15.0% |
| !! | ACGTGAAAAATAAATAAAAT+AGG | - | chr7_2:4282001-4282020 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAAAAGTTCATGA+AGG | - | chr7_2:4282727-4282746 | None:intergenic | 15.0% |
| !! | AATAAAATGTAGAAAAAGAT+AGG | - | chr7_2:4282827-4282846 | None:intergenic | 15.0% |
| !! | AAATTTATACCTGTTATTCA+AGG | + | chr7_2:4280491-4280510 | Msa1045100:intron | 20.0% |
| !! | AATTTATACCTGTTATTCAA+GGG | + | chr7_2:4280492-4280511 | Msa1045100:intron | 20.0% |
| !! | TATAAACATTGTTGTATGTT+TGG | + | chr7_2:4280724-4280743 | Msa1045100:intron | 20.0% |
| !!! | ATTTTTTTTTTTTGTAAGCC+GGG | + | chr7_2:4280831-4280850 | Msa1045100:intron | 20.0% |
| !!! | TAATAATTTTTTGAGTTTGG+CGG | - | chr7_2:4280921-4280940 | None:intergenic | 20.0% |
| !! | CAAAATCATCAATAAACATT+CGG | + | chr7_2:4281119-4281138 | Msa1045100:intron | 20.0% |
| !! | TCTGCAATAATAATTAACAA+TGG | + | chr7_2:4281172-4281191 | Msa1045100:intron | 20.0% |
| !! | TTAAATATATCTATTCACAC+TGG | - | chr7_2:4281369-4281388 | None:intergenic | 20.0% |
| !! | TATATTGAAGGTTATCTTAA+AGG | + | chr7_2:4281539-4281558 | Msa1045100:intron | 20.0% |
| !! | ATATTGAAGGTTATCTTAAA+GGG | + | chr7_2:4281540-4281559 | Msa1045100:intron | 20.0% |
| !! | AATGAAAAATATACTAACAC+AGG | - | chr7_2:4281712-4281731 | None:intergenic | 20.0% |
| !! | CTTGGAAAATTCAAAAAATA+TGG | - | chr7_2:4281755-4281774 | None:intergenic | 20.0% |
| !!! | AATAACATATTTTCACTTCT+TGG | - | chr7_2:4281773-4281792 | None:intergenic | 20.0% |
| !! | AATCAGACAAATATAACTTT+GGG | - | chr7_2:4281867-4281886 | None:intergenic | 20.0% |
| !! | TAATCAGACAAATATAACTT+TGG | - | chr7_2:4281868-4281887 | None:intergenic | 20.0% |
| !!! | TTATTTATTTTTCACGTTTC+AGG | + | chr7_2:4282004-4282023 | Msa1045100:intron | 20.0% |
| !!! | AAGGAATTATCTAAGATTAT+GGG | + | chr7_2:4282168-4282187 | Msa1045100:intron | 20.0% |
| !! | GTGTATAATAATACAAGTTT+AGG | - | chr7_2:4282362-4282381 | None:intergenic | 20.0% |
| !! | TAAATAAAGTCTAGTATACA+TGG | - | chr7_2:4282457-4282476 | None:intergenic | 20.0% |
| !!! | CTTTATTTATGATTACTGTT+CGG | + | chr7_2:4282468-4282487 | Msa1045100:intron | 20.0% |
| ! | ACTTGATTAATTTCCATGAA+TGG | + | chr7_2:4280694-4280713 | Msa1045100:intron | 25.0% |
| ! | TTTATAGTAACTACCATTCA+TGG | - | chr7_2:4280710-4280729 | None:intergenic | 25.0% |
| !!! | CTTTTATTTTCAGCTTTTGA+GGG | - | chr7_2:4280988-4281007 | None:intergenic | 25.0% |
| !!! | TCTTTTATTTTCAGCTTTTG+AGG | - | chr7_2:4280989-4281008 | None:intergenic | 25.0% |
| !! | TTTCTGTTAAACTTTTAGCA+CGG | + | chr7_2:4281033-4281052 | Msa1045100:intron | 25.0% |
| !!! | ATGTTTATTGATGATTTTGG+TGG | - | chr7_2:4281118-4281137 | None:intergenic | 25.0% |
| !!! | CGAATGTTTATTGATGATTT+TGG | - | chr7_2:4281121-4281140 | None:intergenic | 25.0% |
| !!! | NNNNNNNNTGCCTTTGAAGT+TGG | + | chr7_2:4281489-4281508 | Msa1045100:intron | 25.0% |
| ! | TTATGCAGTATTTCTCTAAT+AGG | - | chr7_2:4281669-4281688 | None:intergenic | 25.0% |
| !!! | TAGTTGCTTTTTTCATATCA+TGG | + | chr7_2:4281952-4281971 | Msa1045100:intron | 25.0% |
| !!! | AGTTGCTTTTTTCATATCAT+GGG | + | chr7_2:4281953-4281972 | Msa1045100:intron | 25.0% |
| !! | CAAGGAATTATCTAAGATTA+TGG | + | chr7_2:4282167-4282186 | Msa1045100:intron | 25.0% |
| !! | AGGAATTATCTAAGATTATG+GGG | + | chr7_2:4282169-4282188 | Msa1045100:intron | 25.0% |
| !! | TTTCTACATTTTATTGCAGT+TGG | + | chr7_2:4282832-4282851 | Msa1045100:intron | 25.0% |
| ATAGGGAAATCTTCTGAATT+AGG | + | chr7_2:4279967-4279986 | Msa1045100:CDS | 30.0% | |
| TAGGGAAATCTTCTGAATTA+GGG | + | chr7_2:4279968-4279987 | Msa1045100:CDS | 30.0% | |
| ! | GCAGTAGAAAATGTAGTTTT+AGG | + | chr7_2:4280012-4280031 | Msa1045100:CDS | 30.0% |
| !!! | GTAGAAAATGTAGTTTTAGG+TGG | + | chr7_2:4280015-4280034 | Msa1045100:CDS | 30.0% |
| !! | TTATTCAAGGGTATTTGGAT+GGG | + | chr7_2:4280504-4280523 | Msa1045100:intron | 30.0% |
| ATTTACGCTTAAAGGATACA+CGG | + | chr7_2:4280649-4280668 | Msa1045100:intron | 30.0% | |
| CAAATATCAAGAGGAAACAA+CGG | + | chr7_2:4280862-4280881 | Msa1045100:intron | 30.0% | |
| GGGAAAATATATACACAAGA+GGG | + | chr7_2:4280948-4280967 | Msa1045100:intron | 30.0% | |
| GGAAAATATATACACAAGAG+GGG | + | chr7_2:4280949-4280968 | Msa1045100:intron | 30.0% | |
| GAAAATATATACACAAGAGG+GGG | + | chr7_2:4280950-4280969 | Msa1045100:intron | 30.0% | |
| ! | TTCTGTTAAACTTTTAGCAC+GGG | + | chr7_2:4281034-4281053 | Msa1045100:intron | 30.0% |
| TGAAACAACAACATGTACTT+GGG | - | chr7_2:4281319-4281338 | None:intergenic | 30.0% | |
| TTGAAACAACAACATGTACT+TGG | - | chr7_2:4281320-4281339 | None:intergenic | 30.0% | |
| ATAGATTTCAGTTACATAGC+TGG | + | chr7_2:4281582-4281601 | Msa1045100:CDS | 30.0% | |
| TCTATTTGATCTTTGCAAGA+AGG | + | chr7_2:4281632-4281651 | Msa1045100:CDS | 30.0% | |
| ATACTGCATAATGAGAAGAA+AGG | + | chr7_2:4281678-4281697 | Msa1045100:CDS | 30.0% | |
| TACTGCATAATGAGAAGAAA+GGG | + | chr7_2:4281679-4281698 | Msa1045100:CDS | 30.0% | |
| ! | GGAATTATCTAAGATTATGG+GGG | + | chr7_2:4282170-4282189 | Msa1045100:intron | 30.0% |
| CTAGAATAACCAAGTAATTG+CGG | - | chr7_2:4282337-4282356 | None:intergenic | 30.0% | |
| CTTGATATCAAGGAAAATCA+CGG | + | chr7_2:4282618-4282637 | Msa1045100:intron | 30.0% | |
| TGAGACATTAAAAACCATGA+TGG | + | chr7_2:4282687-4282706 | Msa1045100:intron | 30.0% | |
| GTAGAAAAAGATAGGAGTTA+GGG | - | chr7_2:4282819-4282838 | None:intergenic | 30.0% | |
| TGTAGAAAAAGATAGGAGTT+AGG | - | chr7_2:4282820-4282839 | None:intergenic | 30.0% | |
| AAATCTTCTGAATTAGGGTC+TGG | + | chr7_2:4279973-4279992 | Msa1045100:CDS | 35.0% | |
| ATCAAGGAATACTAGTCCAA+TGG | + | chr7_2:4280083-4280102 | Msa1045100:CDS | 35.0% | |
| TCAAGGAATACTAGTCCAAT+GGG | + | chr7_2:4280084-4280103 | Msa1045100:CDS | 35.0% | |
| ! | TTAACAACCTTTTGCCTTGA+AGG | - | chr7_2:4280135-4280154 | None:intergenic | 35.0% |
| AGGTTGTTAAGACTAAACCA+AGG | + | chr7_2:4280145-4280164 | Msa1045100:CDS | 35.0% | |
| GGTTGTTAAGACTAAACCAA+GGG | + | chr7_2:4280146-4280165 | Msa1045100:CDS | 35.0% | |
| GTTGTTAAGACTAAACCAAG+GGG | + | chr7_2:4280147-4280166 | Msa1045100:CDS | 35.0% | |
| GAAGAAACACATGCTACATT+TGG | + | chr7_2:4280177-4280196 | Msa1045100:CDS | 35.0% | |
| AGTTCATGCTGATATTCAGA+TGG | + | chr7_2:4280206-4280225 | Msa1045100:CDS | 35.0% | |
| TTCAGATGGAGGATAACATA+TGG | + | chr7_2:4280220-4280239 | Msa1045100:CDS | 35.0% | |
| TCAGATGGAGGATAACATAT+GGG | + | chr7_2:4280221-4280240 | Msa1045100:CDS | 35.0% | |
| ACTGTAAGGATGACTATAGA+CGG | - | chr7_2:4280420-4280439 | None:intergenic | 35.0% | |
| !! | ACCTGTTATTCAAGGGTATT+TGG | + | chr7_2:4280499-4280518 | Msa1045100:intron | 35.0% |
| TCCAAATACCCTTGAATAAC+AGG | - | chr7_2:4280503-4280522 | None:intergenic | 35.0% | |
| !! | GTTATTCAAGGGTATTTGGA+TGG | + | chr7_2:4280503-4280522 | Msa1045100:intron | 35.0% |
| GTGTATCCTTTAAGCGTAAA+TGG | - | chr7_2:4280650-4280669 | None:intergenic | 35.0% | |
| TTGATATTTGTCCTTTCTCC+CGG | - | chr7_2:4280852-4280871 | None:intergenic | 35.0% | |
| GAGAAAGGACAAATATCAAG+AGG | + | chr7_2:4280853-4280872 | Msa1045100:intron | 35.0% | |
| GGGGAAAATATATACACAAG+AGG | + | chr7_2:4280947-4280966 | Msa1045100:intron | 35.0% | |
| !! | TGCAGAATCTTTGATTTTCG+CGG | - | chr7_2:4281158-4281177 | None:intergenic | 35.0% |
| ! | TATTGGAGTGCTTAAGGTAT+TGG | - | chr7_2:4281234-4281253 | None:intergenic | 35.0% |
| TACCTTAAGCACTCCAATAT+AGG | + | chr7_2:4281235-4281254 | Msa1045100:intron | 35.0% | |
| CTCCAATATAGGACAATCAT+TGG | + | chr7_2:4281246-4281265 | Msa1045100:intron | 35.0% | |
| GTCCAATGATTGTCCTATAT+TGG | - | chr7_2:4281251-4281270 | None:intergenic | 35.0% | |
| ATATATCAGCCCTTTCTTTC+CGG | - | chr7_2:4281524-4281543 | None:intergenic | 35.0% | |
| AGAAAGGGCTGATATATTGA+AGG | + | chr7_2:4281527-4281546 | Msa1045100:intron | 35.0% | |
| ! | TTACATAGCTGGTTTATGCA+AGG | + | chr7_2:4281593-4281612 | Msa1045100:CDS | 35.0% |
| ! | TACATAGCTGGTTTATGCAA+GGG | + | chr7_2:4281594-4281613 | Msa1045100:CDS | 35.0% |
| ACTGCATAATGAGAAGAAAG+GGG | + | chr7_2:4281680-4281699 | Msa1045100:CDS | 35.0% | |
| ATATAACTTTGGGTGCATAC+TGG | - | chr7_2:4281857-4281876 | None:intergenic | 35.0% | |
| ! | AAGATCAATTTGTGATGACG+TGG | + | chr7_2:4281920-4281939 | Msa1045100:intron | 35.0% |
| !!! | TGCTTTTTTCATATCATGGG+CGG | + | chr7_2:4281956-4281975 | Msa1045100:intron | 35.0% |
| !! | TCAAGTTGAAGCTTCAATCA+AGG | + | chr7_2:4282149-4282168 | Msa1045100:intron | 35.0% |
| ! | TTGGTTGTTGTTGTTGTTGA+TGG | + | chr7_2:4282229-4282248 | Msa1045100:intron | 35.0% |
| ! | TGGTTGTTGTTGTTGTTGAT+GGG | + | chr7_2:4282230-4282249 | Msa1045100:intron | 35.0% |
| TTTAATCCTGAGCATCTACT+TGG | - | chr7_2:4282268-4282287 | None:intergenic | 35.0% | |
| TGCATGAAATTCTGAGCAAA+AGG | - | chr7_2:4282408-4282427 | None:intergenic | 35.0% | |
| CATTGTGATCCTTGATATCA+AGG | + | chr7_2:4282608-4282627 | Msa1045100:intron | 35.0% | |
| ! | CGTGATTTTCCTTGATATCA+AGG | - | chr7_2:4282620-4282639 | None:intergenic | 35.0% |
| AATGTCTCAGCAATCCTAAA+GGG | - | chr7_2:4282676-4282695 | None:intergenic | 35.0% | |
| TAATGTCTCAGCAATCCTAA+AGG | - | chr7_2:4282677-4282696 | None:intergenic | 35.0% | |
| TCATGAAGGCTATTGTGATT+GGG | - | chr7_2:4282713-4282732 | None:intergenic | 35.0% | |
| TTCATGAAGGCTATTGTGAT+TGG | - | chr7_2:4282714-4282733 | None:intergenic | 35.0% | |
| TTGATGTAATTCACATCGCA+AGG | - | chr7_2:4282750-4282769 | None:intergenic | 35.0% | |
| ATCCTGAAAATCTTGCAAGA+AGG | - | chr7_2:4282774-4282793 | None:intergenic | 35.0% | |
| GTTAGGGATGTTAAATGACA+TGG | - | chr7_2:4282803-4282822 | None:intergenic | 35.0% | |
| TTAGGATATGACCCTAACTA+TGG | + | chr7_2:4282932-4282951 | Msa1045100:CDS | 35.0% | |
| AAGAGTGATTCAGCAAAATG+TGG | + | chr7_2:4282970-4282989 | Msa1045100:CDS | 35.0% | |
| GAGAGGAGAATTTAAAGATG+AGG | + | chr7_2:4283018-4283037 | Msa1045100:CDS | 35.0% | |
| !!! | GTGAAAACTAGTTTTTGCTG+TGG | - | chr7_2:4283094-4283113 | None:intergenic | 35.0% |
| ! | TTAGGGTCTGGTGTTAGTAT+TGG | + | chr7_2:4279985-4280004 | Msa1045100:CDS | 40.0% |
| TATACAAGCTTCTCCTCCAA+GGG | + | chr7_2:4280053-4280072 | Msa1045100:CDS | 40.0% | |
| GTTTCTTCATCTAAACCCCT+TGG | - | chr7_2:4280165-4280184 | None:intergenic | 40.0% | |
| TCATGCTGATATTCAGATGG+AGG | + | chr7_2:4280209-4280228 | Msa1045100:CDS | 40.0% | |
| ATCTCATGCAACAAATCCTC+AGG | - | chr7_2:4280255-4280274 | None:intergenic | 40.0% | |
| CTGTAAGGATGACTATAGAC+GGG | - | chr7_2:4280419-4280438 | None:intergenic | 40.0% | |
| GAATGGGAAAGGTTTCTCTT+AGG | - | chr7_2:4280608-4280627 | None:intergenic | 40.0% | |
| GAAACCTTTCCCATTCATTG+TGG | + | chr7_2:4280612-4280631 | Msa1045100:intron | 40.0% | |
| AAGACCACAATGAATGGGAA+AGG | - | chr7_2:4280619-4280638 | None:intergenic | 40.0% | |
| CGAGTAAGACCACAATGAAT+GGG | - | chr7_2:4280624-4280643 | None:intergenic | 40.0% | |
| TCGAGTAAGACCACAATGAA+TGG | - | chr7_2:4280625-4280644 | None:intergenic | 40.0% | |
| TCGACTCCATTTACGCTTAA+AGG | + | chr7_2:4280641-4280660 | Msa1045100:intron | 40.0% | |
| AACAATAGTGCCTACCAGTT+GGG | + | chr7_2:4280768-4280787 | Msa1045100:intron | 40.0% | |
| !!! | TTTTTTGTAAGCCGGGAGAA+AGG | + | chr7_2:4280838-4280857 | Msa1045100:intron | 40.0% |
| !!! | TTTTTTGAGTTTGGCGGCAT+AGG | - | chr7_2:4280915-4280934 | None:intergenic | 40.0% |
| ! | AAACTTTTAGCACGGGTCTA+TGG | + | chr7_2:4281041-4281060 | Msa1045100:intron | 40.0% |
| GAAAATCAAAGCCATGTTGC+TGG | - | chr7_2:4281088-4281107 | None:intergenic | 40.0% | |
| !! | TGCTTAAGGTATTGGCAACT+CGG | - | chr7_2:4281226-4281245 | None:intergenic | 40.0% |
| ! | GTCCTATATTGGAGTGCTTA+AGG | - | chr7_2:4281240-4281259 | None:intergenic | 40.0% |
| TAGGACAATCATTGGACACT+TGG | + | chr7_2:4281254-4281273 | Msa1045100:intron | 40.0% | |
| GTGTGGAATTCCAACTTCAA+AGG | - | chr7_2:4281502-4281521 | None:intergenic | 40.0% | |
| TTGAAGTTGGAATTCCACAC+CGG | + | chr7_2:4281502-4281521 | Msa1045100:intron | 40.0% | |
| AATTCCACACCGGAAAGAAA+GGG | + | chr7_2:4281512-4281531 | Msa1045100:intron | 40.0% | |
| !!! | TTTTTTCATATCATGGGCGG+CGG | + | chr7_2:4281959-4281978 | Msa1045100:intron | 40.0% |
| TGTCTTCCGTGAAGTAGAAA+GGG | - | chr7_2:4282066-4282085 | None:intergenic | 40.0% | |
| ATGTCTTCCGTGAAGTAGAA+AGG | - | chr7_2:4282067-4282086 | None:intergenic | 40.0% | |
| TTCTACTTCACGGAAGACAT+CGG | + | chr7_2:4282067-4282086 | Msa1045100:CDS | 40.0% | |
| GAAAGACATCAAAAACGTCG+CGG | + | chr7_2:4282111-4282130 | Msa1045100:CDS | 40.0% | |
| AAAGACATCAAAAACGTCGC+GGG | + | chr7_2:4282112-4282131 | Msa1045100:CDS | 40.0% | |
| ! | GGTTGTTGTTGTTGTTGATG+GGG | + | chr7_2:4282231-4282250 | Msa1045100:intron | 40.0% |
| ! | GTTGTTGTTGTTGTTGATGG+GGG | + | chr7_2:4282232-4282251 | Msa1045100:intron | 40.0% |
| AGTAATTGCGGTTGCAATCT+GGG | - | chr7_2:4282325-4282344 | None:intergenic | 40.0% | |
| AAGTAATTGCGGTTGCAATC+TGG | - | chr7_2:4282326-4282345 | None:intergenic | 40.0% | |
| AGATTGCAACCGCAATTACT+TGG | + | chr7_2:4282325-4282344 | Msa1045100:intron | 40.0% | |
| TCCTAAAGGGACTGCAATTA+CGG | - | chr7_2:4282663-4282682 | None:intergenic | 40.0% | |
| ! | AGCCTTCTTGCAAGATTTTC+AGG | + | chr7_2:4282769-4282788 | Msa1045100:intron | 40.0% |
| AGATCGCAAGATGAAAATCC+AGG | + | chr7_2:4282877-4282896 | Msa1045100:CDS | 40.0% | |
| TAAGCTTCCAAGAAGTTGGA+TGG | - | chr7_2:4282915-4282934 | None:intergenic | 40.0% | |
| ATCCAACTTCTTGGAAGCTT+AGG | + | chr7_2:4282914-4282933 | Msa1045100:CDS | 40.0% | |
| ATCCTAAGCTTCCAAGAAGT+TGG | - | chr7_2:4282919-4282938 | None:intergenic | 40.0% | |
| ! | TGCTGAATCACTCTTTTGAC+TGG | - | chr7_2:4282965-4282984 | None:intergenic | 40.0% |
| ! | TTGCTGTGGAAGTTGATTGT+TGG | - | chr7_2:4283080-4283099 | None:intergenic | 40.0% |
| GTATACAAGCTTCTCCTCCA+AGG | + | chr7_2:4280052-4280071 | Msa1045100:CDS | 45.0% | |
| ATACAAGCTTCTCCTCCAAG+GGG | + | chr7_2:4280054-4280073 | Msa1045100:CDS | 45.0% | |
| TTCCTTGATCCATTTCCCCT+TGG | - | chr7_2:4280072-4280091 | None:intergenic | 45.0% | |
| TACGAGTCCTTCAAGGCAAA+AGG | + | chr7_2:4280125-4280144 | Msa1045100:CDS | 45.0% | |
| !! | TCAAGGGTATTTGGATGGGA+TGG | + | chr7_2:4280508-4280527 | Msa1045100:intron | 45.0% |
| CAACTGGTAGGCACTATTGT+TGG | - | chr7_2:4280769-4280788 | None:intergenic | 45.0% | |
| CAACAATAGTGCCTACCAGT+TGG | + | chr7_2:4280767-4280786 | Msa1045100:intron | 45.0% | |
| CAATAAACCACCCAACTGGT+AGG | - | chr7_2:4280781-4280800 | None:intergenic | 45.0% | |
| TAGGCAATAAACCACCCAAC+TGG | - | chr7_2:4280785-4280804 | None:intergenic | 45.0% | |
| GAAACAACGGCATCTCAACT+AGG | + | chr7_2:4280875-4280894 | Msa1045100:intron | 45.0% | |
| AGTCAACATCACCAGCAACA+TGG | + | chr7_2:4281074-4281093 | Msa1045100:intron | 45.0% | |
| GAATTCCACACCGGAAAGAA+AGG | + | chr7_2:4281511-4281530 | Msa1045100:intron | 45.0% | |
| GGTTATCTTAAAGGGCGAGA+AGG | + | chr7_2:4281548-4281567 | Msa1045100:intron | 45.0% | |
| GGTTTATGCAAGGGTTACAC+TGG | + | chr7_2:4281603-4281622 | Msa1045100:CDS | 45.0% | |
| AAGACATCAAAAACGTCGCG+GGG | + | chr7_2:4282113-4282132 | Msa1045100:CDS | 45.0% | |
| AGATTATGGGGGTTTCTCAC+AGG | + | chr7_2:4282181-4282200 | Msa1045100:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr7_2:4282211-4282230 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7_2:4282212-4282231 | None:intergenic | 45.0% |
| TCACATCCAAGTAGATGCTC+AGG | + | chr7_2:4282259-4282278 | Msa1045100:intron | 45.0% | |
| TTCTGAGCAAAAGGCAACAC+TGG | - | chr7_2:4282399-4282418 | None:intergenic | 45.0% | |
| CTATTGTGATTGGGCCATCA+TGG | - | chr7_2:4282704-4282723 | None:intergenic | 45.0% | |
| ATGACCCTAACTATGGAGCT+AGG | + | chr7_2:4282939-4282958 | Msa1045100:CDS | 45.0% | |
| TGTGGAGAATGAACTTGCCA+AGG | + | chr7_2:4282988-4283007 | Msa1045100:CDS | 45.0% | |
| GTGGAGAATGAACTTGCCAA+GGG | + | chr7_2:4282989-4283008 | Msa1045100:CDS | 45.0% | |
| TTCTCCTCTCAGAATACCCT+TGG | - | chr7_2:4283008-4283027 | None:intergenic | 45.0% | |
| AAGCTTGTGAAGAATGCTCC+AGG | - | chr7_2:4283156-4283175 | None:intergenic | 45.0% | |
| !! | TCAAAAAATTATTAAAAAAA+GGG | + | chr7_2:4280927-4280946 | Msa1045100:intron | 5.0% |
| CTTGATCCATTTCCCCTTGG+AGG | - | chr7_2:4280069-4280088 | None:intergenic | 50.0% | |
| CTCCAAGGGGAAATGGATCA+AGG | + | chr7_2:4280067-4280086 | Msa1045100:CDS | 50.0% | |
| CGAGGAATACGAGTCCTTCA+AGG | + | chr7_2:4280118-4280137 | Msa1045100:CDS | 50.0% | |
| ! | CATATGGGCTATGTTGCCTG+AGG | + | chr7_2:4280236-4280255 | Msa1045100:CDS | 50.0% |
| AATAGTGCCTACCAGTTGGG+TGG | + | chr7_2:4280771-4280790 | Msa1045100:intron | 50.0% | |
| AGTTTGGCGGCATAGGATAC+GGG | - | chr7_2:4280908-4280927 | None:intergenic | 50.0% | |
| GAGTTTGGCGGCATAGGATA+CGG | - | chr7_2:4280909-4280928 | None:intergenic | 50.0% | |
| !! | TGATTTTCGCGGTGTCGAAC+AGG | - | chr7_2:4281147-4281166 | None:intergenic | 50.0% |
| ! | TCGGACACAGGAGTTGCTTT+CGG | - | chr7_2:4281207-4281226 | None:intergenic | 50.0% |
| CCATATAGAACCCGCTCAAG+GGG | - | chr7_2:4281290-4281309 | None:intergenic | 50.0% | |
| GCCATATAGAACCCGCTCAA+GGG | - | chr7_2:4281291-4281310 | None:intergenic | 50.0% | |
| ! | CTTGAGCGGGTTCTATATGG+CGG | + | chr7_2:4281290-4281309 | Msa1045100:intron | 50.0% |
| ACCTTTGTCGCAGGCAGATT+TGG | + | chr7_2:4282034-4282053 | Msa1045100:CDS | 50.0% | |
| TCCAAATCTGCCTGCGACAA+AGG | - | chr7_2:4282038-4282057 | None:intergenic | 50.0% | |
| TTTGTCGCAGGCAGATTTGG+AGG | + | chr7_2:4282037-4282056 | Msa1045100:CDS | 50.0% | |
| AGGAGGCCCTTTCTACTTCA+CGG | + | chr7_2:4282057-4282076 | Msa1045100:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr7_2:4282207-4282226 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7_2:4282213-4282232 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr7_2:4282210-4282229 | Msa1045100:intron | 50.0% | |
| GCCGTAATTGCAGTCCCTTT+AGG | + | chr7_2:4282659-4282678 | Msa1045100:intron | 50.0% | |
| GATGCTGCCATCCAACTTCT+TGG | + | chr7_2:4282905-4282924 | Msa1045100:CDS | 50.0% | |
| CTGGCCTAGCTCCATAGTTA+GGG | - | chr7_2:4282946-4282965 | None:intergenic | 50.0% | |
| ! | ACTGGCCTAGCTCCATAGTT+AGG | - | chr7_2:4282947-4282966 | None:intergenic | 50.0% |
| !! | CTTGCCAAGGGTATTCTGAG+AGG | + | chr7_2:4283001-4283020 | Msa1045100:CDS | 50.0% |
| ATCTACACCGCAAGAAAGCC+TGG | + | chr7_2:4283135-4283154 | Msa1045100:CDS | 50.0% | |
| GAATGCTCCAGGCTTTCTTG+CGG | - | chr7_2:4283145-4283164 | None:intergenic | 50.0% | |
| GCTTCTCCTCCAAGGGGAAA+TGG | + | chr7_2:4280060-4280079 | Msa1045100:CDS | 55.0% | |
| ACTAGTCCAATGGGTCGCGT+CGG | + | chr7_2:4280093-4280112 | Msa1045100:CDS | 55.0% | |
| !! | GGTATTGGCAACTCGGACAC+AGG | - | chr7_2:4281219-4281238 | None:intergenic | 55.0% |
| ! | GAGATGAAGCACCCCTTGAG+CGG | + | chr7_2:4281276-4281295 | Msa1045100:intron | 55.0% |
| ! | AGATGAAGCACCCCTTGAGC+GGG | + | chr7_2:4281277-4281296 | Msa1045100:intron | 55.0% |
| ! | CCCCTTGAGCGGGTTCTATA+TGG | + | chr7_2:4281287-4281306 | Msa1045100:intron | 55.0% |
| CGCCATATAGAACCCGCTCA+AGG | - | chr7_2:4281292-4281311 | None:intergenic | 55.0% | |
| TCAGCCCTTTCTTTCCGGTG+TGG | - | chr7_2:4281519-4281538 | None:intergenic | 55.0% | |
| GGAACCTAGACCTTTGTCGC+AGG | + | chr7_2:4282025-4282044 | Msa1045100:intron | 55.0% | |
| TCTGCCTGCGACAAAGGTCT+AGG | - | chr7_2:4282032-4282051 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr7_2:4282205-4282224 | Msa1045100:intron | 55.0% | |
| CTAGTCCAATGGGTCGCGTC+GGG | + | chr7_2:4280094-4280113 | Msa1045100:CDS | 60.0% | |
| GTCGCAGGCAGATTTGGAGG+AGG | + | chr7_2:4282040-4282059 | Msa1045100:CDS | 60.0% | |
| CAAAAACGTCGCGGGGAGTC+AGG | + | chr7_2:4282120-4282139 | Msa1045100:CDS | 60.0% | |
| ACAGGCCGACCCCACTTAGT+GGG | + | chr7_2:4282199-4282218 | Msa1045100:intron | 60.0% | |
| GGATGGCAGCATCTGTCACC+TGG | - | chr7_2:4282898-4282917 | None:intergenic | 60.0% | |
| CACAGGCCGACCCCACTTAG+TGG | + | chr7_2:4282198-4282217 | Msa1045100:intron | 65.0% | |
| CTCGACCCGACGCGACCCAT+TGG | - | chr7_2:4280102-4280121 | None:intergenic | 70.0% | |
| CAATGGGTCGCGTCGGGTCG+AGG | + | chr7_2:4280100-4280119 | Msa1045100:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 4279958 | 4283180 | 4279958 | ID=Msa1045100;Name=Msa1045100 |
| chr7_2 | mRNA | 4279958 | 4283180 | 4279958 | ID=Msa1045100-mRNA-1;Parent=Msa1045100;Name=Msa1045100-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0.25|0|0.8|1|1|5|0|327 |
| chr7_2 | exon | 4279958 | 4280284 | 4279958 | ID=Msa1045100-mRNA-1:exon:986;Parent=Msa1045100-mRNA-1 |
| chr7_2 | exon | 4281561 | 4281713 | 4281561 | ID=Msa1045100-mRNA-1:exon:987;Parent=Msa1045100-mRNA-1 |
| chr7_2 | exon | 4282026 | 4282141 | 4282026 | ID=Msa1045100-mRNA-1:exon:988;Parent=Msa1045100-mRNA-1 |
| chr7_2 | exon | 4282400 | 4282457 | 4282400 | ID=Msa1045100-mRNA-1:exon:989;Parent=Msa1045100-mRNA-1 |
| chr7_2 | exon | 4282851 | 4283180 | 4282851 | ID=Msa1045100-mRNA-1:exon:990;Parent=Msa1045100-mRNA-1 |
| chr7_2 | CDS | 4279958 | 4280284 | 4279958 | ID=Msa1045100-mRNA-1:cds;Parent=Msa1045100-mRNA-1 |
| chr7_2 | CDS | 4281561 | 4281713 | 4281561 | ID=Msa1045100-mRNA-1:cds;Parent=Msa1045100-mRNA-1 |
| chr7_2 | CDS | 4282026 | 4282141 | 4282026 | ID=Msa1045100-mRNA-1:cds;Parent=Msa1045100-mRNA-1 |
| chr7_2 | CDS | 4282400 | 4282457 | 4282400 | ID=Msa1045100-mRNA-1:cds;Parent=Msa1045100-mRNA-1 |
| chr7_2 | CDS | 4282851 | 4283180 | 4282851 | ID=Msa1045100-mRNA-1:cds;Parent=Msa1045100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
