AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204390 MtrunA17_Chr4g0053441 96.382 608 12 1 40 637 222 829 0.0 1191
Msa1204390 MtrunA17_Chr2g0297871 29.338 559 345 11 47 599 27 541 2.18e-60 213
Msa1204390 MtrunA17_Chr4g0050431 30.368 517 324 13 84 588 391 883 1.80e-55 203
Msa1204390 MtrunA17_Chr4g0071991 27.641 568 351 12 39 594 176 695 2.23e-50 188
Msa1204390 MtrunA17_Chr5g0397621 32.193 497 297 14 100 577 385 860 6.64e-49 184
Msa1204390 MtrunA17_Chr3g0136331 29.651 516 317 12 83 573 354 848 1.48e-43 167
Msa1204390 MtrunA17_Chr8g0339181 29.679 529 317 14 66 573 420 914 1.77e-42 164
Msa1204390 MtrunA17_Chr2g0297051 25.980 612 370 15 19 577 407 988 1.38e-40 159
Msa1204390 MtrunA17_Chr4g0052521 25.522 623 364 17 19 577 370 956 2.30e-40 158
Msa1204390 MtrunA17_Chr8g0374321 32.661 248 151 5 45 283 429 669 5.14e-24 107
Msa1204390 MtrunA17_Chr8g0374391 32.955 176 108 4 409 577 30 202 1.37e-16 79.7
Msa1204390 MtrunA17_Chr8g0374331 32.955 176 108 4 409 577 37 209 1.51e-16 79.7
Msa1204390 MtrunA17_Chr8g0374371 34.014 147 88 3 100 238 42 187 3.49e-13 69.7
Msa1204390 MtrunA17_Chr7g0263361 27.982 218 113 8 406 580 616 832 7.20e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204390 AT4G37270.1 76.401 589 128 2 40 618 218 805 0.0 907
Msa1204390 AT5G21930.2 31.022 548 311 14 64 573 322 840 4.08e-51 190
Msa1204390 AT5G21930.1 31.022 548 311 14 64 573 322 840 4.08e-51 190
Msa1204390 AT4G30110.1 27.481 524 344 11 82 599 203 696 9.20e-51 189
Msa1204390 AT4G30110.2 27.481 524 344 11 82 599 203 696 9.20e-51 189
Msa1204390 AT2G19110.2 28.488 516 326 15 93 599 224 705 1.71e-50 189
Msa1204390 AT2G19110.3 28.488 516 326 15 93 599 224 705 1.71e-50 189
Msa1204390 AT2G19110.1 28.488 516 326 15 93 599 224 705 1.71e-50 189
Msa1204390 AT4G33520.2 29.559 521 321 15 84 588 402 892 1.32e-48 183
Msa1204390 AT4G33520.3 29.767 514 321 15 84 580 402 892 1.76e-48 183
Msa1204390 AT5G21930.4 31.311 511 285 13 64 536 322 804 5.90e-48 181
Msa1204390 AT1G63440.1 31.548 504 292 15 100 577 478 954 4.61e-47 179
Msa1204390 AT5G44790.1 28.488 516 317 14 89 575 464 956 1.04e-44 172
Msa1204390 AT5G21930.3 29.380 548 297 16 64 573 322 817 1.23e-40 159
Msa1204390 AT4G30120.2 25.616 406 252 10 39 436 19 382 2.27e-30 123
Msa1204390 AT4G30120.1 25.616 406 252 10 39 436 178 541 2.22e-29 123

Find 199 sgRNAs with CRISPR-Local

Find 642 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAGAGGTTTGATAGAAAT+TGG 0.118156 8_1:+60177116 None:intergenic
GGCTTCCCTTCCGTCAGTTT+TGG 0.178850 8_1:-60168634 Msa1204390:CDS
GGACGCTATCTTAAAATAAT+AGG 0.188756 8_1:+60167852 None:intergenic
TCAATTGCTATTGCTGTTCT+TGG 0.210359 8_1:-60174249 Msa1204390:CDS
TATGATTATGATTATGAGTA+TGG 0.221106 8_1:+60177021 None:intergenic
GGCATTGTCTAGCATATTCT+TGG 0.228426 8_1:-60168655 Msa1204390:CDS
TGAGAGAATCAGAGTTTATT+AGG 0.252527 8_1:+60177312 None:intergenic
CAAAGGTGGCTGGATGAATT+TGG 0.281364 8_1:-60174303 Msa1204390:CDS
TCCAGCCACCTTTGAAGTTT+AGG 0.293991 8_1:+60174312 None:intergenic
CGACCAGAATGAACGAGTTT+TGG 0.294272 8_1:+60176757 None:intergenic
GCTATTAATGCATCTTCTTA+TGG 0.295250 8_1:-60171312 Msa1204390:CDS
TTTCAAATGGAATAATAAAA+TGG 0.300476 8_1:-60167810 Msa1204390:three_prime_UTR
AACAACTGCACCACAATAAA+AGG 0.302467 8_1:-60177343 Msa1204390:five_prime_UTR
ACTTCTCGTGCTGTTATAAC+AGG 0.312428 8_1:+60167754 None:intergenic
ACCATTGCATTTGATAAAAC+AGG 0.313148 8_1:-60172382 Msa1204390:CDS
GTCAATCCATTTGGTAGCTT+TGG 0.315025 8_1:+60176890 None:intergenic
GCAACTTATCTTCAGGCTTC+AGG 0.315496 8_1:+60170151 None:intergenic
TATTTGAAATCAAATGTATT+AGG 0.327072 8_1:+60175669 None:intergenic
TCAAGAACAAGTGCAAATTC+TGG 0.329012 8_1:+60175711 None:intergenic
TGGTCGCATTTCCGTTGGTT+GGG 0.332817 8_1:-60176740 Msa1204390:CDS
ACTCAAAGGTGGACATGTTC+TGG 0.334899 8_1:-60172425 Msa1204390:CDS
AGAGAGGTTTGATAGAAATT+GGG 0.342658 8_1:+60177117 None:intergenic
AAGGCAATTGAGCCTGTTTA+CGG 0.342799 8_1:-60172331 Msa1204390:CDS
AAAGGATATCTCAAGAGATA+TGG 0.345113 8_1:-60170121 Msa1204390:CDS
TGTCCAAAACTCGTTCATTC+TGG 0.352789 8_1:-60176760 Msa1204390:CDS
GGTTCTATCTACAGAGCCTT+AGG 0.363004 8_1:-60173497 Msa1204390:CDS
GACAGGTTTGATGAGTGATT+TGG 0.363726 8_1:+60176779 None:intergenic
TTCCATTTGAAAGGCAAAAC+GGG 0.367247 8_1:+60167821 None:intergenic
AAAGTTGGAGATAGAGTTCC+TGG 0.368979 8_1:-60175196 Msa1204390:CDS
CACTTGCTGCTGCAACTGTT+GGG 0.374065 8_1:-60168938 Msa1204390:CDS
CTGTAATATATCATGCTTCC+AGG 0.374765 8_1:+60168094 None:intergenic
TGAAGTTGTCTGCCGAGATT+TGG 0.379930 8_1:+60168821 None:intergenic
GACGCTATCTTAAAATAATA+GGG 0.379983 8_1:+60167853 None:intergenic
CATGATATATTACAGTTGAT+TGG 0.380717 8_1:-60168086 Msa1204390:CDS
TGCCTTGGCTGTGGCTCCAT+TGG 0.384104 8_1:-60173450 Msa1204390:CDS
AATCTAGACTCTCCTCTCTT+AGG 0.385080 8_1:-60168055 Msa1204390:CDS
TATGATTATGAGTATGGTTA+TGG 0.386196 8_1:+60177027 None:intergenic
ATGATGGAGAATGAGGAATT+TGG 0.390636 8_1:+60177088 None:intergenic
CTGGTCGCATTTCCGTTGGT+TGG 0.392485 8_1:-60176741 Msa1204390:CDS
AATACCCCTTGTAAATGTAT+AGG 0.402784 8_1:-60167906 Msa1204390:three_prime_UTR
ACATGACGCAACTTATCTTC+AGG 0.418228 8_1:+60170144 None:intergenic
ATTCGCTAGGTCAATCCATT+TGG 0.420166 8_1:+60176881 None:intergenic
GCACTTGCTGCTGCAACTGT+TGG 0.421771 8_1:-60168939 Msa1204390:CDS
TCTCTTAGGACAAATATAAC+AGG 0.423503 8_1:-60168041 Msa1204390:CDS
ATAGGGAATGTCCAATACTT+TGG 0.425078 8_1:+60167870 None:intergenic
TAGGGAATGTCCAATACTTT+GGG 0.426341 8_1:+60167871 None:intergenic
AGTGATTTGGGCAAAGTATG+AGG 0.430434 8_1:+60176792 None:intergenic
ATTACCATTGAGCACTTGAC+AGG 0.431899 8_1:-60175241 Msa1204390:CDS
ACAGGTTTGATGAGTGATTT+GGG 0.433483 8_1:+60176780 None:intergenic
AGTGAATGGAATTTGGTAGA+TGG 0.440192 8_1:+60177203 None:intergenic
TGTTGCGGCAGCCATGGAAA+AGG 0.442091 8_1:-60172236 Msa1204390:CDS
CTAATGCGATGACCGTAAAC+AGG 0.447398 8_1:+60172319 None:intergenic
ACAGTTGCAGCAGCAAGTGC+TGG 0.448739 8_1:+60168942 None:intergenic
ATTCCATTTGAAAGGCAAAA+CGG 0.453876 8_1:+60167820 None:intergenic
TTGGTCCACTTGTATTTAAG+TGG 0.454297 8_1:-60174230 Msa1204390:CDS
TTGTGTGGGTGTGAAGTGAA+TGG 0.454372 8_1:+60177189 None:intergenic
TTTGAGTACTTTCCTGGTAG+AGG 0.454663 8_1:-60171798 Msa1204390:CDS
TACTGGTGGACTTGTATTCA+AGG 0.458170 8_1:-60172350 Msa1204390:CDS
ACCCAAGTGATGCTTTCAAT+AGG 0.465409 8_1:+60171394 None:intergenic
AGGAACTCTATCTCCAACTT+TGG 0.466602 8_1:+60175198 None:intergenic
GGTTGATGTTAAAGAGTTGA+AGG 0.467608 8_1:-60175742 Msa1204390:CDS
CTGGAGGATAGGCCTCGTCC+AGG 0.469698 8_1:-60170300 Msa1204390:CDS
TCAAAATGATACCTTCCAAT+GGG 0.470455 8_1:+60172202 None:intergenic
ACCTAAACTTCAAAGGTGGC+TGG 0.472188 8_1:-60174313 Msa1204390:CDS
TTGCATTCCCACCTGTGAAA+AGG 0.475193 8_1:-60172269 Msa1204390:CDS
ATTTCTTCCATTGTGGATAA+CGG 0.475920 8_1:-60168610 Msa1204390:intron
GGTCGCATTTCCGTTGGTTG+GGG 0.477467 8_1:-60176739 Msa1204390:intron
AAACCTCTGGAGGCCAAAGT+TGG 0.479488 8_1:-60175211 Msa1204390:CDS
TGCAGCATCACCATGTGCCT+TGG 0.480763 8_1:-60173465 Msa1204390:CDS
GTATTTCACAAGTCGTTCAA+TGG 0.480835 8_1:-60175763 Msa1204390:CDS
TGGAGGATAGGCCTCGTCCA+GGG 0.482722 8_1:-60170299 Msa1204390:CDS
TTCCGTGTGATGATGTTAAC+TGG 0.483577 8_1:-60170237 Msa1204390:CDS
ATCACCATGTGCCTTGGCTG+TGG 0.483615 8_1:-60173459 Msa1204390:CDS
AACAACGAAGTTTATGATGA+TGG 0.484541 8_1:+60177072 None:intergenic
GTTTCGCCAAAGCTACCAAA+TGG 0.487686 8_1:-60176896 Msa1204390:five_prime_UTR
GGCGGTGCAAGGAACATAGA+TGG 0.488667 8_1:-60175175 Msa1204390:CDS
TCCAAAACTTGTTACCTCTC+CGG 0.488744 8_1:+60175593 None:intergenic
GTGGGATCATATGTCCTTGT+TGG 0.491264 8_1:-60175618 Msa1204390:CDS
CGTTGATTCACCTGGAGGAT+AGG 0.491810 8_1:-60170311 Msa1204390:CDS
CATTCTGGTCGCATTTCCGT+TGG 0.493184 8_1:-60176745 Msa1204390:CDS
TAAATGAACCATCCTGGTCC+TGG 0.493505 8_1:-60168112 Msa1204390:CDS
GAAATTGGGGATGTGCGAAT+AGG 0.494228 8_1:+60177131 None:intergenic
GGCTTAATTATGGTTGGTGA+AGG 0.494682 8_1:-60168978 Msa1204390:CDS
ATCGATGATGCGAATCTCAC+TGG 0.494904 8_1:-60176939 Msa1204390:five_prime_UTR
TGGTTCATTTAAACCACGTA+TGG 0.495446 8_1:+60168124 None:intergenic
AATAGGAAAAGCGAGGTTAG+AGG 0.496704 8_1:+60177148 None:intergenic
TAATAAAATGGCAAATATCA+AGG 0.499878 8_1:-60167798 Msa1204390:three_prime_UTR
GTTGCGGCAGCCATGGAAAA+GGG 0.505287 8_1:-60172235 Msa1204390:CDS
TTCAAAATGATACCTTCCAA+TGG 0.509760 8_1:+60172201 None:intergenic
TCATATGTCCTTGTTGGTGC+CGG 0.510228 8_1:-60175612 Msa1204390:CDS
GTGAATGGAATTTGGTAGAT+GGG 0.511154 8_1:+60177204 None:intergenic
AGGAATTTGGAAGAATAGAG+AGG 0.513522 8_1:+60177101 None:intergenic
GATTAAGCAAAATGTAGCTC+TGG 0.514025 8_1:-60168676 Msa1204390:CDS
AAGGATATCTCAAGAGATAT+GGG 0.514882 8_1:-60170120 Msa1204390:intron
TGCTGTTAACAGTAGCAGTA+AGG 0.516956 8_1:+60171775 None:intergenic
AACCTATTGAAAGCATCACT+TGG 0.517138 8_1:-60171396 Msa1204390:CDS
CTACAGAGCCTTAGGGCTCA+TGG 0.522521 8_1:-60173489 Msa1204390:CDS
CGGTCATCGCATTAGAAACA+AGG 0.525626 8_1:-60172311 Msa1204390:CDS
AAAGGAAGCTCTTGCTGTTG+CGG 0.526765 8_1:-60172251 Msa1204390:CDS
TTCCCCTGTCAAGTGCTCAA+TGG 0.526856 8_1:+60175237 None:intergenic
GGTGTGAAGTGAATGGAATT+TGG 0.527710 8_1:+60177196 None:intergenic
AGATAAGTTGCGTCATGTAA+AGG 0.529752 8_1:-60170139 Msa1204390:CDS
TCTTGCTGTTGCGGCAGCCA+TGG 0.531269 8_1:-60172242 Msa1204390:CDS
TGTTATAACAGCACGAGAAG+TGG 0.532474 8_1:-60167752 Msa1204390:three_prime_UTR
GTTATGATCGGTGTGATTTG+CGG 0.532890 8_1:+60177049 None:intergenic
GAGAGGTTTGATAGAAATTG+GGG 0.535581 8_1:+60177118 None:intergenic
GTTTATGATGATGGAGAATG+AGG 0.537798 8_1:+60177081 None:intergenic
TCTCCAACTTTGGCCTCCAG+AGG 0.537839 8_1:+60175208 None:intergenic
GTGATTTGGGCAAAGTATGA+GGG 0.538012 8_1:+60176793 None:intergenic
TTTGTTGATGCAGCTTGCAG+AGG 0.543905 8_1:-60173518 Msa1204390:intron
TATCGTGGACAGGAACCCTC+TGG 0.544668 8_1:+60175646 None:intergenic
TATATCATGCTTCCAGGACC+AGG 0.545479 8_1:+60168100 None:intergenic
GACAGGGGAAGTCAAACCTC+TGG 0.545837 8_1:-60175224 Msa1204390:CDS
GCAGGTCACGTTGATTCACC+TGG 0.549731 8_1:-60170319 Msa1204390:intron
TGGAAAACTTCACAATCTAC+AGG 0.552595 8_1:+60175277 None:intergenic
AAGATGCCTATACATTTACA+AGG 0.555098 8_1:+60167900 None:intergenic
ATCTCGGCAGACAACTTCAC+TGG 0.558427 8_1:-60168817 Msa1204390:intron
AAGGGCACTACCCACCCCAT+TGG 0.559044 8_1:-60172217 Msa1204390:CDS
CATTCTGTATTGCCAAATCT+CGG 0.561945 8_1:-60168833 Msa1204390:CDS
TATATTACAGTTGATTGGCA+AGG 0.564000 8_1:-60168081 Msa1204390:CDS
TGAATAGACCTAAACTTCAA+AGG 0.565264 8_1:-60174320 Msa1204390:CDS
GTACCTGGTGTACTAAAGAA+TGG 0.569445 8_1:+60174207 None:intergenic
CGAGATTTGGCAATACAGAA+TGG 0.570862 8_1:+60168834 None:intergenic
ATGATACCTTCCAATGGGGT+GGG 0.570870 8_1:+60172207 None:intergenic
AATGATACCTTCCAATGGGG+TGG 0.571569 8_1:+60172206 None:intergenic
CCCACAGTTATATCGTGGAC+AGG 0.573819 8_1:+60175636 None:intergenic
GTTCTATCTACAGAGCCTTA+GGG 0.574940 8_1:-60173496 Msa1204390:CDS
GTTAGAGGATTTGATCCTTG+TGG 0.578477 8_1:+60177163 None:intergenic
CCATTGCATTTGATAAAACA+GGG 0.581955 8_1:-60172381 Msa1204390:CDS
ATAGAGTTCCTGGCGGTGCA+AGG 0.582278 8_1:-60175186 Msa1204390:CDS
GTTTGTCTCAACTCCATACG+TGG 0.582771 8_1:-60168137 Msa1204390:CDS
TCTATGTTCCTTGCACCGCC+AGG 0.583235 8_1:+60175178 None:intergenic
TGCTGCAACCATGAGCCCTA+AGG 0.586386 8_1:+60173481 None:intergenic
TGCTACTGTTAACAGCATTG+AGG 0.587811 8_1:-60171769 Msa1204390:intron
TGCACAGGAGCTGATTGCTG+TGG 0.588322 8_1:+60173421 None:intergenic
AAAACAGGGACATTGACTAC+TGG 0.589422 8_1:-60172367 Msa1204390:CDS
TCCATTTGAAAGGCAAAACG+GGG 0.589547 8_1:+60167822 None:intergenic
TAAAATGAATTGCAGGGCTG+TGG 0.592347 8_1:-60171868 Msa1204390:intron
TGGCCATTCTTTAGTACACC+AGG 0.592719 8_1:-60174210 Msa1204390:intron
GAAATCCCAAAACTGACGGA+AGG 0.592946 8_1:+60168628 None:intergenic
TTACCATTGAGCACTTGACA+GGG 0.593656 8_1:-60175240 Msa1204390:CDS
ACAGGGACATTGACTACTGG+TGG 0.595895 8_1:-60172364 Msa1204390:CDS
TTGTTATAGTCAGGAGCTGG+AGG 0.596664 8_1:-60171423 Msa1204390:intron
GTGGTTTAAATGAACCATCC+TGG 0.596951 8_1:-60168118 Msa1204390:CDS
AATGGCCACTTAAATACAAG+TGG 0.597154 8_1:+60174225 None:intergenic
GCTCTCTCAAGAAATTCGCT+AGG 0.601109 8_1:+60176868 None:intergenic
TAGTTTCTTACCCCAACCAA+CGG 0.601581 8_1:+60176729 None:intergenic
TGGTAATTGTGGCACCGCCG+TGG 0.601583 8_1:+60175257 None:intergenic
GTAGCAGTAAGGCCTCTACC+AGG 0.601894 8_1:+60171786 None:intergenic
ACCTATTGAAAGCATCACTT+GGG 0.602175 8_1:-60171395 Msa1204390:CDS
CTTGTTACGGGTCATTACAG+TGG 0.604049 8_1:+60177374 None:intergenic
TGCCAATGGAGCCACAGCCA+AGG 0.608775 8_1:+60173448 None:intergenic
TGTTATATTTGTCCTAAGAG+AGG 0.609994 8_1:+60168043 None:intergenic
CATCACAGGTAACAAAGACA+TGG 0.612204 8_1:-60174392 Msa1204390:intron
ATTGCTGTGGCATATGCCAA+TGG 0.613253 8_1:+60173434 None:intergenic
CTGTGGTTGAACATAGTGAA+GGG 0.614550 8_1:-60171851 Msa1204390:CDS
TGATTTGGGCAAAGTATGAG+GGG 0.620042 8_1:+60176794 None:intergenic
GCACTACCCACCCCATTGGA+AGG 0.620348 8_1:-60172213 Msa1204390:intron
ATTTGATTTCAAATACCAGA+GGG 0.624066 8_1:-60175661 Msa1204390:CDS
AAATCCCAAAACTGACGGAA+GGG 0.625234 8_1:+60168629 None:intergenic
ATGCAGGTTCTCTTACATGA+AGG 0.625523 8_1:-60168173 Msa1204390:intron
GGAGCCACAGCCAAGGCACA+TGG 0.627092 8_1:+60173455 None:intergenic
TGTCATACCGTTATCCACAA+TGG 0.627678 8_1:+60168603 None:intergenic
CTACACACATCACAAATTCG+CGG 0.629168 8_1:+60168001 None:intergenic
AGATGCCTATACATTTACAA+GGG 0.630095 8_1:+60167901 None:intergenic
GCGTTACAGCAAAGTTGTTG+TGG 0.631820 8_1:-60174277 Msa1204390:CDS
AAGAGAGTTGCAAGTGCTGT+GGG 0.633487 8_1:-60170195 Msa1204390:CDS
TTGCAGGGCATATTACTCAA+AGG 0.636255 8_1:-60172439 Msa1204390:intron
AAAGAGAGTTGCAAGTGCTG+TGG 0.636430 8_1:-60170196 Msa1204390:CDS
GCTGTGGTTGAACATAGTGA+AGG 0.636595 8_1:-60171852 Msa1204390:CDS
ACAGGTAACAAAGACATGGA+AGG 0.636600 8_1:-60174388 Msa1204390:intron
TTACCTCTCCGGCACCAACA+AGG 0.637057 8_1:+60175604 None:intergenic
CAGGGCATATTACTCAAAGG+TGG 0.637638 8_1:-60172436 Msa1204390:CDS
TCCTGTCCACGATATAACTG+TGG 0.638620 8_1:-60175637 Msa1204390:CDS
CCTGTCCACGATATAACTGT+GGG 0.640509 8_1:-60175636 Msa1204390:CDS
TGTCCTTGTTGGTGCCGGAG+AGG 0.641083 8_1:-60175607 Msa1204390:intron
AGATGGTAGAATAATTGTGA+AGG 0.643350 8_1:-60175158 Msa1204390:intron
TCATGCTTCCAGGACCAGGA+TGG 0.644114 8_1:+60168104 None:intergenic
ATGATCCCACAGTTATATCG+TGG 0.648538 8_1:+60175631 None:intergenic
GTTACGGGTCATTACAGTGG+AGG 0.648616 8_1:+60177377 None:intergenic
AGTATGGTTATGGTTATGAT+CGG 0.651815 8_1:+60177037 None:intergenic
GGAAGAAATCCCAAAACTGA+CGG 0.653538 8_1:+60168624 None:intergenic
CTTCTCGTGCTGTTATAACA+GGG 0.657074 8_1:+60167755 None:intergenic
CACCAGTTAACATCATCACA+CGG 0.657313 8_1:+60170235 None:intergenic
CATTTGATTTCAAATACCAG+AGG 0.660551 8_1:-60175662 Msa1204390:CDS
TACCATTGAGCACTTGACAG+GGG 0.669528 8_1:-60175239 Msa1204390:CDS
GGAGTTGAGACAAACAAGCA+AGG 0.669963 8_1:+60168145 None:intergenic
ATAGACCTAAACTTCAAAGG+TGG 0.670685 8_1:-60174317 Msa1204390:CDS
AGGGGAAGTCAAACCTCTGG+AGG 0.671091 8_1:-60175221 Msa1204390:CDS
CAGGTTCTCTTACATGAAGG+CGG 0.671593 8_1:-60168170 Msa1204390:CDS
AGTAGAGAAATAGTGTATTG+CGG 0.672392 8_1:-60167967 Msa1204390:three_prime_UTR
GATGCCTATACATTTACAAG+GGG 0.678179 8_1:+60167902 None:intergenic
CAAGTGCTCAATGGTAATTG+TGG 0.696113 8_1:+60175246 None:intergenic
CAAAATGATACCTTCCAATG+GGG 0.711661 8_1:+60172203 None:intergenic
CCATTTGAAAGGCAAAACGG+GGG 0.719580 8_1:+60167823 None:intergenic
TTTCAACAGAGACAGAAGGG+AGG 0.724915 8_1:+60171823 None:intergenic
GGTCACGTTGATTCACCTGG+AGG 0.730026 8_1:-60170316 Msa1204390:CDS
ATGTGCGAATAGGAAAAGCG+AGG 0.738586 8_1:+60177141 None:intergenic
GTTGGAGATAGAGTTCCTGG+CGG 0.796828 8_1:-60175193 Msa1204390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAAATATATTTTTTA+AGG + chr8_1:60174481-60174500 None:intergenic 0.0%
!! AAAGAAAAAAATAATTTACA+TGG - chr8_1:60171162-60171181 Msa1204390:intron 10.0%
!! AAGAAAAAAATAATTTACAT+GGG - chr8_1:60171163-60171182 Msa1204390:intron 10.0%
!!! TTATTCAAAATTTTAAACAT+GGG - chr8_1:60172622-60172641 Msa1204390:intron 10.0%
!!! TACCTTTTTATTAATTATAA+GGG + chr8_1:60173855-60173874 None:intergenic 10.0%
!!! AAATAATTTTCAAAATAAAC+AGG + chr8_1:60174289-60174308 None:intergenic 10.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr8_1:60174509-60174528 Msa1204390:intron 10.0%
!! TTTAGTAAAAATTATTATTG+TGG - chr8_1:60175251-60175270 Msa1204390:CDS 10.0%
!! TTAGTAAAAATTATTATTGT+GGG - chr8_1:60175252-60175271 Msa1204390:CDS 10.0%
!! TACAAAATTATTATAAAATG+AGG - chr8_1:60175340-60175359 Msa1204390:intron 10.0%
!! AGTATTAAGAATTTAAAAAA+AGG + chr8_1:60175375-60175394 None:intergenic 10.0%
!! AGGATATTTAAAAATAAATT+AGG + chr8_1:60175453-60175472 None:intergenic 10.0%
!! AAAAAAATAAAAATTGAGAA+AGG - chr8_1:60175759-60175778 Msa1204390:CDS 10.0%
!! AAAAAATAAAAATTGAGAAA+GGG - chr8_1:60175760-60175779 Msa1204390:CDS 10.0%
!!! TTTTAAAGAAAAAAAAAATG+TGG - chr8_1:60176345-60176364 Msa1204390:intron 10.0%
!!! TTTATTTTCTTTAGAAATTA+TGG - chr8_1:60176650-60176669 Msa1204390:intron 10.0%
!! AGAAAAATAATACTTTATTA+GGG + chr8_1:60176823-60176842 None:intergenic 10.0%
!! AAGAAAAATAATACTTTATT+AGG + chr8_1:60176824-60176843 None:intergenic 10.0%
!!! ACATTCAACTTTTATAATAA+TGG - chr8_1:60167837-60167856 Msa1204390:three_prime_UTR 15.0%
!! TTAATCAAACAAATACATTA+TGG - chr8_1:60168718-60168737 Msa1204390:intron 15.0%
!!! TATTTGAAATCAAATGTATT+AGG + chr8_1:60169455-60169474 None:intergenic 15.0%
!!! TCAATATATATTATTTTAGG+AGG - chr8_1:60170279-60170298 Msa1204390:CDS 15.0%
!!! TATAATGGAGATATTTATAA+TGG + chr8_1:60170445-60170464 None:intergenic 15.0%
!! TTAAATGATAATTAAAGGAA+AGG + chr8_1:60171044-60171063 None:intergenic 15.0%
!! TTCCTTTAATTATCATTTAA+TGG - chr8_1:60171044-60171063 Msa1204390:intron 15.0%
!! TTCCATTAAATGATAATTAA+AGG + chr8_1:60171049-60171068 None:intergenic 15.0%
!!! GGAAAAAAAAAACTTTATTT+TGG - chr8_1:60172061-60172080 Msa1204390:intron 15.0%
!!! CTTATTCAAAATTTTAAACA+TGG - chr8_1:60172621-60172640 Msa1204390:intron 15.0%
!! CTATATTTATATATTTGAGA+TGG + chr8_1:60173179-60173198 None:intergenic 15.0%
!!! CTACCTTTTTATTAATTATA+AGG + chr8_1:60173856-60173875 None:intergenic 15.0%
!!! AGAAATGATATTTTTTATGT+TGG - chr8_1:60173977-60173996 Msa1204390:intron 15.0%
!! ACCAATTTCTAAATTTAATA+AGG - chr8_1:60174106-60174125 Msa1204390:intron 15.0%
!! ACCTTATTAAATTTAGAAAT+TGG + chr8_1:60174110-60174129 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr8_1:60174632-60174651 Msa1204390:intron 15.0%
!!! AAAATTTTAGGTGAAAAAAA+AGG + chr8_1:60174658-60174677 None:intergenic 15.0%
!! TGTTAGAAATAATGTAAATA+GGG - chr8_1:60175100-60175119 Msa1204390:intron 15.0%
!!! TATATTTATTCATTAGTCTA+CGG + chr8_1:60175306-60175325 None:intergenic 15.0%
!! TAAGAATTTAAAAAAAGGAA+TGG + chr8_1:60175370-60175389 None:intergenic 15.0%
!! GTGTTTATATAACAAAAAAA+GGG + chr8_1:60175424-60175443 None:intergenic 15.0%
!! TGTGTTTATATAACAAAAAA+AGG + chr8_1:60175425-60175444 None:intergenic 15.0%
!! AAAAATAAAAATTGAGAAAG+GGG - chr8_1:60175761-60175780 Msa1204390:CDS 15.0%
!! GAAAAATAATACTTTATTAG+GGG + chr8_1:60176822-60176841 None:intergenic 15.0%
!!! ATTTTATTATTCCATTTGAA+AGG + chr8_1:60177312-60177331 None:intergenic 15.0%
!! TTTCAAATGGAATAATAAAA+TGG - chr8_1:60177311-60177330 Msa1204390:five_prime_UTR 15.0%
!!! TTGTTTGTTTTTTCTTGTTA+CGG + chr8_1:60167763-60167782 None:intergenic 20.0%
!! TATGATTATGATTATGAGTA+TGG + chr8_1:60168103-60168122 None:intergenic 20.0%
!!! GTTTTTTTCATATACTATCA+TGG - chr8_1:60169125-60169144 Msa1204390:intron 20.0%
!!! AATAAGTTGAAAACAACTTA+TGG - chr8_1:60169165-60169184 Msa1204390:intron 20.0%
!!! TTTGATTCGTTTAATTTGAA+TGG - chr8_1:60169319-60169338 Msa1204390:intron 20.0%
!!! TTTTGGAATTTTAATTGCTT+GGG - chr8_1:60169544-60169563 Msa1204390:intron 20.0%
!!! TTTTTACTACAATTGTTAGT+TGG - chr8_1:60169655-60169674 Msa1204390:intron 20.0%
!! TGAAACTTGGTTAATTATAA+TGG + chr8_1:60170460-60170479 None:intergenic 20.0%
!! TTGACAAAGATTGAAAAATA+AGG - chr8_1:60170522-60170541 Msa1204390:intron 20.0%
!! ATTATCATTTAATGGAAATG+TGG - chr8_1:60171052-60171071 Msa1204390:intron 20.0%
!! GCTGAAATATAATTATATGA+AGG + chr8_1:60171573-60171592 None:intergenic 20.0%
!!! TTTTATTACACTGTTGAATA+TGG - chr8_1:60172371-60172390 Msa1204390:CDS 20.0%
!! TGCTAACTATATGTTATAAT+GGG - chr8_1:60173565-60173584 Msa1204390:intron 20.0%
!!! GTTTTTATTTTGTTATAGTC+AGG - chr8_1:60173689-60173708 Msa1204390:intron 20.0%
!! TGCCCTTATAATTAATAAAA+AGG - chr8_1:60173850-60173869 Msa1204390:intron 20.0%
!!! AGATTTAATGTGTTTTGTTT+GGG + chr8_1:60174335-60174354 None:intergenic 20.0%
!! GTGTTAGAAATAATGTAAAT+AGG - chr8_1:60175099-60175118 Msa1204390:intron 20.0%
!!! TTTTCTTATTTCTCTCAATA+CGG - chr8_1:60175174-60175193 Msa1204390:CDS 20.0%
!!! ATATTTATTCATTAGTCTAC+GGG + chr8_1:60175305-60175324 None:intergenic 20.0%
!! TATGCAAAATTGGAAAAATT+AGG + chr8_1:60175484-60175503 None:intergenic 20.0%
!! AGGAAATAATTATGCAAAAT+TGG + chr8_1:60175494-60175513 None:intergenic 20.0%
!! CACAAAACAAAAATTGAATT+AGG + chr8_1:60175514-60175533 None:intergenic 20.0%
!! TTTCAAAAAACTATAAGAGT+GGG + chr8_1:60175677-60175696 None:intergenic 20.0%
!!! TTTTCAAAAAACTATAAGAG+TGG + chr8_1:60175678-60175697 None:intergenic 20.0%
!! TGAAAAATAACCATAGAATA+AGG + chr8_1:60176897-60176916 None:intergenic 20.0%
!! TAATAAAATGGCAAATATCA+AGG - chr8_1:60177323-60177342 Msa1204390:five_prime_UTR 20.0%
!!! TGTTTGTTTTTTCTTGTTAC+GGG + chr8_1:60167762-60167781 None:intergenic 25.0%
!!! ATGAAATTGCTTCCATTTTT+GGG + chr8_1:60167890-60167909 None:intergenic 25.0%
!! TATGAAATTGCTTCCATTTT+TGG + chr8_1:60167891-60167910 None:intergenic 25.0%
! TATGATTATGAGTATGGTTA+TGG + chr8_1:60168097-60168116 None:intergenic 25.0%
!!! AGCTTTTGCAACTATTTTTA+TGG - chr8_1:60168630-60168649 Msa1204390:CDS 25.0%
!!! GCTTTTGCAACTATTTTTAT+GGG - chr8_1:60168631-60168650 Msa1204390:CDS 25.0%
!!! CTTTTGCAACTATTTTTATG+GGG - chr8_1:60168632-60168651 Msa1204390:CDS 25.0%
! ATGTTTAATCTTGCACATAT+TGG - chr8_1:60168685-60168704 Msa1204390:intron 25.0%
! AAATACATTATGGTCGTATT+TGG - chr8_1:60168728-60168747 Msa1204390:intron 25.0%
!!! TTCTAAGATAGAATCAATTC+CGG - chr8_1:60168933-60168952 Msa1204390:CDS 25.0%
!! TTTTCATATACTATCATGGA+CGG - chr8_1:60169129-60169148 Msa1204390:intron 25.0%
!! TCTTATTTGAGTTTATCTAC+AGG + chr8_1:60169250-60169269 None:intergenic 25.0%
!! ATTTGATTTCAAATACCAGA+GGG - chr8_1:60169460-60169479 Msa1204390:intron 25.0%
!!! GTTTTGGAATTTTAATTGCT+TGG - chr8_1:60169543-60169562 Msa1204390:intron 25.0%
!! GAAATCATTTCAACTTTTGA+TGG - chr8_1:60169677-60169696 Msa1204390:intron 25.0%
!!! AATTTTAGCCTTTGTTAAAG+TGG - chr8_1:60170030-60170049 Msa1204390:intron 25.0%
! AAACTTATCCACTTTAACAA+AGG + chr8_1:60170041-60170060 None:intergenic 25.0%
! GTGGATAAGTTTATTAATGT+TGG - chr8_1:60170049-60170068 Msa1204390:intron 25.0%
! GATAAGTTTATTAATGTTGG+TGG - chr8_1:60170052-60170071 Msa1204390:intron 25.0%
! AGAATGGCAATAATAGTATT+TGG - chr8_1:60170095-60170114 Msa1204390:intron 25.0%
! GAATGGCAATAATAGTATTT+GGG - chr8_1:60170096-60170115 Msa1204390:intron 25.0%
! AATGGCAATAATAGTATTTG+GGG - chr8_1:60170097-60170116 Msa1204390:intron 25.0%
! CAATATTAATAATGTGTCAG+TGG - chr8_1:60170211-60170230 Msa1204390:CDS 25.0%
!!! TATTATTTTAGGAGGATTAC+TGG - chr8_1:60170287-60170306 Msa1204390:CDS 25.0%
! AAAATGAAACTTCCAAACAT+AGG + chr8_1:60170500-60170519 None:intergenic 25.0%
! GTACAAAATTATTTCATCAC+AGG - chr8_1:60170715-60170734 Msa1204390:intron 25.0%
!!! AAAAGAATTTAAGAAGTACC+TGG + chr8_1:60170932-60170951 None:intergenic 25.0%
! ATTTGTAAACTAATCATCTG+TGG - chr8_1:60170993-60171012 Msa1204390:intron 25.0%
! TTTGTAAACTAATCATCTGT+GGG - chr8_1:60170994-60171013 Msa1204390:intron 25.0%
! AGTATAGTATTAATGAACTG+CGG + chr8_1:60171509-60171528 None:intergenic 25.0%
! AGTGTATTTAGATTAGATAC+TGG + chr8_1:60171750-60171769 None:intergenic 25.0%
! AAATTCGTGCTTATATTTCT+GGG - chr8_1:60171961-60171980 Msa1204390:intron 25.0%
! AAAACTTCACTTATCATTTG+TGG + chr8_1:60172147-60172166 None:intergenic 25.0%
! GAAATAAAGGGAAAAGAAAA+TGG + chr8_1:60172221-60172240 None:intergenic 25.0%
!!! AAAGAGATGATGGAAATAAA+GGG + chr8_1:60172233-60172252 None:intergenic 25.0%
!!! AAAAGAGATGATGGAAATAA+AGG + chr8_1:60172234-60172253 None:intergenic 25.0%
!! ACTGTTAATAATGCTTTGTT+TGG + chr8_1:60172268-60172287 None:intergenic 25.0%
! TATCAATAAGCTGAATTGAA+TGG - chr8_1:60172437-60172456 Msa1204390:intron 25.0%
! AATTCTAAACTTCAGAAAGT+GGG + chr8_1:60172506-60172525 None:intergenic 25.0%
!!! TTCTGAAGTTTAGAATTGAA+TGG - chr8_1:60172509-60172528 Msa1204390:intron 25.0%
!! TTTTATCAAATGCAATGGTA+TGG + chr8_1:60172738-60172757 None:intergenic 25.0%
! CATCATTCATCTATTTATTG+AGG - chr8_1:60173013-60173032 Msa1204390:intron 25.0%
! ACATTCAAGATTGAATTGAA+TGG + chr8_1:60173147-60173166 None:intergenic 25.0%
!! TTTTCTGTAAAATGAATTGC+AGG - chr8_1:60173246-60173265 Msa1204390:intron 25.0%
! TTTCTGTAAAATGAATTGCA+GGG - chr8_1:60173247-60173266 Msa1204390:intron 25.0%
! AAGTGTACCATGAAAAAAAT+GGG + chr8_1:60173480-60173499 None:intergenic 25.0%
! AAAGTGTACCATGAAAAAAA+TGG + chr8_1:60173481-60173500 None:intergenic 25.0%
! GTGCTAACTATATGTTATAA+TGG - chr8_1:60173564-60173583 Msa1204390:intron 25.0%
! CTTATAACTGAATACTTCAT+AGG + chr8_1:60173592-60173611 None:intergenic 25.0%
! ATCTGAAGATGAATCAAAAA+AGG - chr8_1:60173778-60173797 Msa1204390:intron 25.0%
! TTTGATATGCTAAAAAACAG+AGG + chr8_1:60174157-60174176 None:intergenic 25.0%
!!! GAGATTTAATGTGTTTTGTT+TGG + chr8_1:60174336-60174355 None:intergenic 25.0%
!!! CACATCAATTTTTTTGCTTT+AGG + chr8_1:60174457-60174476 None:intergenic 25.0%
! CTAAAGCAAAAAAATTGATG+TGG - chr8_1:60174455-60174474 Msa1204390:intron 25.0%
!! TTGACCATGAATTCAAATTT+TGG + chr8_1:60174538-60174557 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr8_1:60174638-60174657 None:intergenic 25.0%
!! TTTCTTATTTCTCTCAATAC+GGG - chr8_1:60175175-60175194 Msa1204390:CDS 25.0%
!! TTATTATTGTGGGTACTTTT+TGG - chr8_1:60175262-60175281 Msa1204390:CDS 25.0%
!!! TATTATTGTGGGTACTTTTT+GGG - chr8_1:60175263-60175282 Msa1204390:CDS 25.0%
! ATCTAACATAAAAACATACG+AGG + chr8_1:60175562-60175581 None:intergenic 25.0%
!!! GGGATTTTTTTTATCAACAA+CGG - chr8_1:60175781-60175800 Msa1204390:intron 25.0%
! GCTTGATTTAATAACTTCAA+CGG + chr8_1:60175860-60175879 None:intergenic 25.0%
!!! AACAATATCGGTTTTACTTT+GGG + chr8_1:60175994-60176013 None:intergenic 25.0%
! AAAAAGGACGTCATTTAATT+CGG + chr8_1:60176076-60176095 None:intergenic 25.0%
!!! ACTGTTTTTACTTTTGTAAC+AGG - chr8_1:60176116-60176135 Msa1204390:intron 25.0%
!!! CTGTTTTTACTTTTGTAACA+GGG - chr8_1:60176117-60176136 Msa1204390:intron 25.0%
!!! TGTTTTTACTTTTGTAACAG+GGG - chr8_1:60176118-60176137 Msa1204390:intron 25.0%
! ATGTCTTCAAATTTCGTTTA+GGG + chr8_1:60176736-60176755 None:intergenic 25.0%
! TTCTTCAATTTACGAAAAAC+TGG + chr8_1:60176774-60176793 None:intergenic 25.0%
! CATGATATATTACAGTTGAT+TGG - chr8_1:60177035-60177054 Msa1204390:five_prime_UTR 25.0%
! GACGCTATCTTAAAATAATA+GGG + chr8_1:60177271-60177290 None:intergenic 25.0%
TGAGAGAATCAGAGTTTATT+AGG + chr8_1:60167812-60167831 None:intergenic 30.0%
AGAGAGGTTTGATAGAAATT+GGG + chr8_1:60168007-60168026 None:intergenic 30.0%
TAGAGAGGTTTGATAGAAAT+TGG + chr8_1:60168008-60168027 None:intergenic 30.0%
AACAACGAAGTTTATGATGA+TGG + chr8_1:60168052-60168071 None:intergenic 30.0%
AGTATGGTTATGGTTATGAT+CGG + chr8_1:60168087-60168106 None:intergenic 30.0%
!!! AAACTGATAATCGCTTTTTG+AGG + chr8_1:60168209-60168228 None:intergenic 30.0%
! AATTTGAAGTTGTTTGCGTT+TGG - chr8_1:60168830-60168849 Msa1204390:CDS 30.0%
!! TGTAGCTTTGAGTTTAAACA+TGG + chr8_1:60168904-60168923 None:intergenic 30.0%
TTGATTCTATCTTAGAAGCT+AGG + chr8_1:60168930-60168949 None:intergenic 30.0%
CACTTAATTAAGCCTATGTT+AGG + chr8_1:60169045-60169064 None:intergenic 30.0%
TTTCATATACTATCATGGAC+GGG - chr8_1:60169130-60169149 Msa1204390:intron 30.0%
!! GCACTTAACTTGTTAAACTA+GGG + chr8_1:60169288-60169307 None:intergenic 30.0%
!! AGCACTTAACTTGTTAAACT+AGG + chr8_1:60169289-60169308 None:intergenic 30.0%
! CATTTGATTTCAAATACCAG+AGG - chr8_1:60169459-60169478 Msa1204390:intron 30.0%
GCAGATTATTGAAGTGTAAT+CGG - chr8_1:60169798-60169817 Msa1204390:intron 30.0%
TTATTGAAGTGTAATCGGAA+TGG - chr8_1:60169803-60169822 Msa1204390:intron 30.0%
AGATGGTAGAATAATTGTGA+AGG - chr8_1:60169963-60169982 Msa1204390:intron 30.0%
! GAATAATTGTGAAGGTATGT+TGG - chr8_1:60169971-60169990 Msa1204390:intron 30.0%
!! TTATTAATGTTGGTGGTATG+AGG - chr8_1:60170059-60170078 Msa1204390:intron 30.0%
GTCAAACTAGTGATGTTAAT+GGG - chr8_1:60170172-60170191 Msa1204390:CDS 30.0%
TATTAATAATGTGTCAGTGG+CGG - chr8_1:60170214-60170233 Msa1204390:CDS 30.0%
AAACTTCCAAACATAGGTAT+TGG + chr8_1:60170494-60170513 None:intergenic 30.0%
! TGTTTACAGTGCAATTTTGT+TGG - chr8_1:60170678-60170697 Msa1204390:intron 30.0%
! GTTTACAGTGCAATTTTGTT+GGG - chr8_1:60170679-60170698 Msa1204390:intron 30.0%
TGAATAGACCTAAACTTCAA+AGG - chr8_1:60170801-60170820 Msa1204390:intron 30.0%
TTCCTTTGTGATTCAGTATT+AGG + chr8_1:60171132-60171151 None:intergenic 30.0%
AATAATAAGTGGAGTGATTC+AGG + chr8_1:60171274-60171293 None:intergenic 30.0%
ATGAATGGGGAAATAATAAG+TGG + chr8_1:60171285-60171304 None:intergenic 30.0%
TCTTCATCCTTGTATAGATT+TGG - chr8_1:60171466-60171485 Msa1204390:intron 30.0%
CTTCATCCTTGTATAGATTT+GGG - chr8_1:60171467-60171486 Msa1204390:intron 30.0%
!!! AACTTATACCTTTTTTGCAC+AGG + chr8_1:60171718-60171737 None:intergenic 30.0%
! ACCATTTCATTCTAGCTAAA+GGG + chr8_1:60171836-60171855 None:intergenic 30.0%
! TACCATTTCATTCTAGCTAA+AGG + chr8_1:60171837-60171856 None:intergenic 30.0%
AAAAACACAAACTGTACAGA+TGG + chr8_1:60171890-60171909 None:intergenic 30.0%
GAAATTCGTGCTTATATTTC+TGG - chr8_1:60171960-60171979 Msa1204390:intron 30.0%
ATAGTTCTCTCTTCAAATGT+AGG - chr8_1:60172021-60172040 Msa1204390:intron 30.0%
TAGGAAGAGAAAAGATAGAA+AGG - chr8_1:60172040-60172059 Msa1204390:intron 30.0%
ACTTATCATTTGTGGTTGAA+TGG + chr8_1:60172139-60172158 None:intergenic 30.0%
!! GTTTTAACCAAGTGTAAACT+TGG - chr8_1:60172286-60172305 Msa1204390:CDS 30.0%
! TACTGATTAAAGAAACGTTC+CGG - chr8_1:60172406-60172425 Msa1204390:CDS 30.0%
GCTTATTGATAGATCTATTC+CGG + chr8_1:60172428-60172447 None:intergenic 30.0%
ATTCTAAACTTCAGAAAGTG+GGG + chr8_1:60172505-60172524 None:intergenic 30.0%
CAATTCTAAACTTCAGAAAG+TGG + chr8_1:60172507-60172526 None:intergenic 30.0%
AAACACAAACTTCAGAAAGT+GGG + chr8_1:60172578-60172597 None:intergenic 30.0%
!! TTTCTGAAGTTTGTGTTTGT+CGG - chr8_1:60172580-60172599 Msa1204390:intron 30.0%
ATGGGATGTTTGTTTATTTG+TGG - chr8_1:60172640-60172659 Msa1204390:intron 30.0%
TGGGATGTTTGTTTATTTGT+GGG - chr8_1:60172641-60172660 Msa1204390:intron 30.0%
ACCATTGCATTTGATAAAAC+AGG - chr8_1:60172739-60172758 Msa1204390:intron 30.0%
CCATTGCATTTGATAAAACA+GGG - chr8_1:60172740-60172759 Msa1204390:intron 30.0%
TCAAAATGATACCTTCCAAT+GGG + chr8_1:60172922-60172941 None:intergenic 30.0%
TTCAAAATGATACCTTCCAA+TGG + chr8_1:60172923-60172942 None:intergenic 30.0%
! CTTTTGTATGTTTCTCGATT+TGG - chr8_1:60173059-60173078 Msa1204390:intron 30.0%
!! TATGTTTCTCGATTTGGTAT+TGG - chr8_1:60173065-60173084 Msa1204390:intron 30.0%
! AATTTTCAACAGAGACAGAA+GGG + chr8_1:60173304-60173323 None:intergenic 30.0%
! AAATTTTCAACAGAGACAGA+AGG + chr8_1:60173305-60173324 None:intergenic 30.0%
!! GAAAATTTTGAGTACTTTCC+TGG - chr8_1:60173317-60173336 Msa1204390:intron 30.0%
GTAGTGTAAACTATAATGCT+TGG + chr8_1:60173405-60173424 None:intergenic 30.0%
! ACTAACATTAGTTTCAGACT+CGG + chr8_1:60173546-60173565 None:intergenic 30.0%
ACAAGTAGAATGACTCAAAT+TGG - chr8_1:60173667-60173686 Msa1204390:intron 30.0%
AGATGAATCAAAAAAGGTCA+AGG - chr8_1:60173784-60173803 Msa1204390:intron 30.0%
GCTATTAATGCATCTTCTTA+TGG - chr8_1:60173809-60173828 Msa1204390:intron 30.0%
GTCATATACTTAGTCTCTTA+CGG - chr8_1:60173882-60173901 Msa1204390:intron 30.0%
!! AATTTTGATGGTTTGTACTC+TGG - chr8_1:60174022-60174041 Msa1204390:intron 30.0%
!! TCAAAAGCACCTATATTTGT+TGG - chr8_1:60174172-60174191 Msa1204390:intron 30.0%
!! CAAAAGCACCTATATTTGTT+GGG - chr8_1:60174173-60174192 Msa1204390:intron 30.0%
!! AAAAGCACCTATATTTGTTG+GGG - chr8_1:60174174-60174193 Msa1204390:intron 30.0%
CTGTAGAAGTTGAAAAACTT+TGG + chr8_1:60174266-60174285 None:intergenic 30.0%
! TTGTTATTGTTGTTGTGAAC+TGG - chr8_1:60174409-60174428 Msa1204390:intron 30.0%
! TGTTATTGTTGTTGTGAACT+GGG - chr8_1:60174410-60174429 Msa1204390:intron 30.0%
GAGACCAAAATTTGAATTCA+TGG - chr8_1:60174531-60174550 Msa1204390:intron 30.0%
! AACAGTAATTGAGACCTTTT+TGG - chr8_1:60174556-60174575 Msa1204390:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr8_1:60174573-60174592 None:intergenic 30.0%
AAAGGATATCTCAAGAGATA+TGG - chr8_1:60175000-60175019 Msa1204390:intron 30.0%
AAGGATATCTCAAGAGATAT+GGG - chr8_1:60175001-60175020 Msa1204390:intron 30.0%
! ATCTTTTGTCTCTGATAACA+TGG - chr8_1:60175052-60175071 Msa1204390:intron 30.0%
GGAAAAATTAGGATTGTAAG+AGG + chr8_1:60175473-60175492 None:intergenic 30.0%
GATTTAATAACTTCAACGGA+CGG + chr8_1:60175856-60175875 None:intergenic 30.0%
AAAACACGAAAAAGTCCAAA+AGG + chr8_1:60175901-60175920 None:intergenic 30.0%
!!! CAACAATATCGGTTTTACTT+TGG + chr8_1:60175995-60176014 None:intergenic 30.0%
CTAAGGTAGAACAACAATAT+CGG + chr8_1:60176006-60176025 None:intergenic 30.0%
AAAAGGACGTCATTTAATTC+GGG + chr8_1:60176075-60176094 None:intergenic 30.0%
TTGAGCACAAAACTGTAAAA+AGG + chr8_1:60176092-60176111 None:intergenic 30.0%
!! GTTTTTACTTTTGTAACAGG+GGG - chr8_1:60176119-60176138 Msa1204390:intron 30.0%
AGAAAAAAAAAATGTGGCTC+TGG - chr8_1:60176351-60176370 Msa1204390:intron 30.0%
! TACGTAATCTTTTCAGCAAT+TGG - chr8_1:60176390-60176409 Msa1204390:intron 30.0%
ATTTCTTCCATTGTGGATAA+CGG - chr8_1:60176511-60176530 Msa1204390:intron 30.0%
ATTCTGTTAACAAGGACAAA+TGG + chr8_1:60176607-60176626 None:intergenic 30.0%
TCACATTCATTCTGTTAACA+AGG + chr8_1:60176615-60176634 None:intergenic 30.0%
! TGTTCAAGTTATTCACTACA+TGG + chr8_1:60176678-60176697 None:intergenic 30.0%
TGTAAACACAGAAAAGAAGA+GGG + chr8_1:60176709-60176728 None:intergenic 30.0%
ATGTAAACACAGAAAAGAAG+AGG + chr8_1:60176710-60176729 None:intergenic 30.0%
GATGTCTTCAAATTTCGTTT+AGG + chr8_1:60176737-60176756 None:intergenic 30.0%
TATATTACAGTTGATTGGCA+AGG - chr8_1:60177040-60177059 Msa1204390:five_prime_UTR 30.0%
TGTTATATTTGTCCTAAGAG+AGG + chr8_1:60177081-60177100 None:intergenic 30.0%
TCTCTTAGGACAAATATAAC+AGG - chr8_1:60177080-60177099 Msa1204390:five_prime_UTR 30.0%
AGTAGAGAAATAGTGTATTG+CGG - chr8_1:60177154-60177173 Msa1204390:five_prime_UTR 30.0%
AATACCCCTTGTAAATGTAT+AGG - chr8_1:60177215-60177234 Msa1204390:five_prime_UTR 30.0%
AGATGCCTATACATTTACAA+GGG + chr8_1:60177223-60177242 None:intergenic 30.0%
AAGATGCCTATACATTTACA+AGG + chr8_1:60177224-60177243 None:intergenic 30.0%
GGACGCTATCTTAAAATAAT+AGG + chr8_1:60177272-60177291 None:intergenic 30.0%
ATTCCATTTGAAAGGCAAAA+CGG + chr8_1:60177304-60177323 None:intergenic 30.0%
AACAACTGCACCACAATAAA+AGG - chr8_1:60167778-60167797 Msa1204390:three_prime_UTR 35.0%
! GGACATATGACCTTTTATTG+TGG + chr8_1:60167791-60167810 None:intergenic 35.0%
CGAATTTCAACTCCCAAAAA+TGG - chr8_1:60167875-60167894 Msa1204390:three_prime_UTR 35.0%
GTGAATGGAATTTGGTAGAT+GGG + chr8_1:60167920-60167939 None:intergenic 35.0%
AGTGAATGGAATTTGGTAGA+TGG + chr8_1:60167921-60167940 None:intergenic 35.0%
GAGAGGTTTGATAGAAATTG+GGG + chr8_1:60168006-60168025 None:intergenic 35.0%
AGGAATTTGGAAGAATAGAG+AGG + chr8_1:60168023-60168042 None:intergenic 35.0%
! ATGATGGAGAATGAGGAATT+TGG + chr8_1:60168036-60168055 None:intergenic 35.0%
!! GTTTATGATGATGGAGAATG+AGG + chr8_1:60168043-60168062 None:intergenic 35.0%
! GATGATGATGATGATGATGA+TGG + chr8_1:60168145-60168164 None:intergenic 35.0%
ACAGGTTTGATGAGTGATTT+GGG + chr8_1:60168344-60168363 None:intergenic 35.0%
ACTTGATGTGTATCAGGTTT+CGG - chr8_1:60168540-60168559 Msa1204390:intron 35.0%
GATGCTCTAATTGAAATGAG+TGG - chr8_1:60168571-60168590 Msa1204390:intron 35.0%
!! TATTTTTATGGGGAACGCTT+TGG - chr8_1:60168642-60168661 Msa1204390:CDS 35.0%
TAAGATAGAATCAATTCCGG+AGG - chr8_1:60168936-60168955 Msa1204390:CDS 35.0%
! GTAGTCAAAATTGATTCTGG+AGG + chr8_1:60169009-60169028 None:intergenic 35.0%
! GGAGTAGTCAAAATTGATTC+TGG + chr8_1:60169012-60169031 None:intergenic 35.0%
!!! AATTTTGACTACTCCAAACG+TGG - chr8_1:60169017-60169036 Msa1204390:intron 35.0%
GTTAAACTAGGGCATATGTT+TGG + chr8_1:60169277-60169296 None:intergenic 35.0%
GTATTTCACAAGTCGTTCAA+TGG - chr8_1:60169358-60169377 Msa1204390:intron 35.0%
! GGTTGATGTTAAAGAGTTGA+AGG - chr8_1:60169379-60169398 Msa1204390:intron 35.0%
TCAAGAACAAGTGCAAATTC+TGG + chr8_1:60169413-60169432 None:intergenic 35.0%
ATATGATTGCTTCCTTGTGT+TGG - chr8_1:60169602-60169621 Msa1204390:intron 35.0%
TATGATTGCTTCCTTGTGTT+GGG - chr8_1:60169603-60169622 Msa1204390:intron 35.0%
!!! TGGGTTTTGAGGTTTTCAAA+TGG - chr8_1:60169622-60169641 Msa1204390:intron 35.0%
!! TTTGAGGTTTTCAAATGGCT+AGG - chr8_1:60169627-60169646 Msa1204390:intron 35.0%
!! CATTTCAACTTTTGATGGCT+TGG - chr8_1:60169682-60169701 Msa1204390:intron 35.0%
TGGAAAACTTCACAATCTAC+AGG + chr8_1:60169847-60169866 None:intergenic 35.0%
! GTAGATTGTGAAGTTTTCCA+CGG - chr8_1:60169847-60169866 Msa1204390:intron 35.0%
!! TTGTGATGGATGAAACAGTT+AGG - chr8_1:60170141-60170160 Msa1204390:CDS 35.0%
ATGAAACAGTTAGGAGAAGA+AGG - chr8_1:60170150-60170169 Msa1204390:CDS 35.0%
GGTCAAACTAGTGATGTTAA+TGG - chr8_1:60170171-60170190 Msa1204390:CDS 35.0%
AAACTAGTGATGTTAATGGG+TGG - chr8_1:60170175-60170194 Msa1204390:CDS 35.0%
! AACTAGTGATGTTAATGGGT+GGG - chr8_1:60170176-60170195 Msa1204390:CDS 35.0%
!! TGTGTAAATCGTTAGTTCTG+AGG - chr8_1:60170318-60170337 Msa1204390:CDS 35.0%
!! GAATTGCTGTATGTTTTTGC+TGG - chr8_1:60170407-60170426 Msa1204390:intron 35.0%
AACTTATCCTTAGACATGCT+TGG + chr8_1:60170562-60170581 None:intergenic 35.0%
TTGCTAGAGATTGTAATGCT+AGG - chr8_1:60170580-60170599 Msa1204390:intron 35.0%
! CATTGCTGACAGTCTAAAAT+TGG + chr8_1:60170609-60170628 None:intergenic 35.0%
ATAGACCTAAACTTCAAAGG+TGG - chr8_1:60170804-60170823 Msa1204390:intron 35.0%
! TCAATTGCTATTGCTGTTCT+TGG - chr8_1:60170872-60170891 Msa1204390:intron 35.0%
TTGGTCCACTTGTATTTAAG+TGG - chr8_1:60170891-60170910 Msa1204390:intron 35.0%
AATGGCCACTTAAATACAAG+TGG + chr8_1:60170899-60170918 None:intergenic 35.0%
TGTGATTCAGTATTAGGAGA+GGG + chr8_1:60171126-60171145 None:intergenic 35.0%
TTGTGATTCAGTATTAGGAG+AGG + chr8_1:60171127-60171146 None:intergenic 35.0%
CTCCTAATACTGAATCACAA+AGG - chr8_1:60171127-60171146 Msa1204390:intron 35.0%
! TAGAGAAATGGTGAGGTTTT+GGG + chr8_1:60171223-60171242 None:intergenic 35.0%
! ATAGAGAAATGGTGAGGTTT+TGG + chr8_1:60171224-60171243 None:intergenic 35.0%
GAAAGAATAGAGAAATGGTG+AGG + chr8_1:60171230-60171249 None:intergenic 35.0%
CAGTGAGCACTATATAAAGT+TGG + chr8_1:60171545-60171564 None:intergenic 35.0%
GGGCTAACAAAAATTCAAAG+CGG + chr8_1:60171816-60171835 None:intergenic 35.0%
TACTTCACAACTTAAACACC+AGG + chr8_1:60171861-60171880 None:intergenic 35.0%
TGGGTTTATCAGTTTAGTTG+AGG - chr8_1:60171980-60171999 Msa1204390:intron 35.0%
ATCAGTTTAGTTGAGGAAAG+CGG - chr8_1:60171987-60172006 Msa1204390:intron 35.0%
AAGAATACATGTTTGCATGC+AGG + chr8_1:60172188-60172207 None:intergenic 35.0%
GCAGAAAGAAAAAGAGATGA+TGG + chr8_1:60172243-60172262 None:intergenic 35.0%
TCAGTTTCCAAGTTTACACT+TGG + chr8_1:60172296-60172315 None:intergenic 35.0%
AACACAAACTTCAGAAAGTG+GGG + chr8_1:60172577-60172596 None:intergenic 35.0%
CAAACACAAACTTCAGAAAG+TGG + chr8_1:60172579-60172598 None:intergenic 35.0%
! CCCTGTTTTATCAAATGCAA+TGG + chr8_1:60172743-60172762 None:intergenic 35.0%
CAAAATGATACCTTCCAATG+GGG + chr8_1:60172921-60172940 None:intergenic 35.0%
! AATTGTTACTTGTACGAGGT+TGG + chr8_1:60172972-60172991 None:intergenic 35.0%
! GATTTGGTATTGGACTATTG+TGG - chr8_1:60173075-60173094 Msa1204390:intron 35.0%
CTCAAAATACTGACAATGCA+TGG + chr8_1:60173427-60173446 None:intergenic 35.0%
CCAAGAGAAATGTATGCAAT+AGG + chr8_1:60173452-60173471 None:intergenic 35.0%
CCTATTGCATACATTTCTCT+TGG - chr8_1:60173449-60173468 Msa1204390:CDS 35.0%
!!! GGAGAATCCCATTTTTTTCA+TGG - chr8_1:60173470-60173489 Msa1204390:CDS 35.0%
!! ATTTTGTTATAGTCAGGAGC+TGG - chr8_1:60173695-60173714 Msa1204390:intron 35.0%
!! AACCTATTGAAAGCATCACT+TGG - chr8_1:60173725-60173744 Msa1204390:intron 35.0%
!! ACCTATTGAAAGCATCACTT+GGG - chr8_1:60173726-60173745 Msa1204390:intron 35.0%
TAAACAGAACAGTACAAGAC+AGG - chr8_1:60173934-60173953 Msa1204390:intron 35.0%
AAACAGAACAGTACAAGACA+GGG - chr8_1:60173935-60173954 Msa1204390:intron 35.0%
!! GCGTACTTTGGTAATTTTGA+TGG - chr8_1:60174010-60174029 Msa1204390:intron 35.0%
TATGCTAAAAAACAGAGGAC+TGG + chr8_1:60174152-60174171 None:intergenic 35.0%
!! ATATCTCCAGCTTTAGAAGT+TGG - chr8_1:60174233-60174252 Msa1204390:CDS 35.0%
!!! ATGTGTTTTGTTTGGGAAGA+GGG + chr8_1:60174328-60174347 None:intergenic 35.0%
!!! AATGTGTTTTGTTTGGGAAG+AGG + chr8_1:60174329-60174348 None:intergenic 35.0%
TTTAGGCCTCTTAATCTGTT+AGG + chr8_1:60174440-60174459 None:intergenic 35.0%
!! GCTTTAGGTCGCAAAATTTT+AGG + chr8_1:60174670-60174689 None:intergenic 35.0%
! CTTGTCAACATTTTCCTTCT+GGG - chr8_1:60174757-60174776 Msa1204390:intron 35.0%
TGAATAACATCAAAAACCCC+TGG + chr8_1:60174842-60174861 None:intergenic 35.0%
AGATAAGTTGCGTCATGTAA+AGG - chr8_1:60174982-60175001 Msa1204390:intron 35.0%
TCCATAATTCATGTCATACC+CGG - chr8_1:60175201-60175220 Msa1204390:CDS 35.0%
AGGTACTTAACCATAAGTAC+CGG + chr8_1:60175223-60175242 None:intergenic 35.0%
AACAACGGTGACACTTATAA+TGG - chr8_1:60175796-60175815 Msa1204390:intron 35.0%
TAAGACAACAGAGTCAACTA+AGG + chr8_1:60176023-60176042 None:intergenic 35.0%
CATTCTGTATTGCCAAATCT+CGG - chr8_1:60176288-60176307 Msa1204390:intron 35.0%
GATTAAGCAAAATGTAGCTC+TGG - chr8_1:60176445-60176464 Msa1204390:intron 35.0%
!!! TTTTGGGATTTCTTCCATTG+TGG - chr8_1:60176504-60176523 Msa1204390:intron 35.0%
CGATCTTGTTACTATTTGTC+AGG - chr8_1:60176560-60176579 Msa1204390:intron 35.0%
GTAAACACAGAAAAGAAGAG+GGG + chr8_1:60176708-60176727 None:intergenic 35.0%
TTCTCTCGAACCTTATTCTA+TGG - chr8_1:60176884-60176903 Msa1204390:five_prime_UTR 35.0%
TCAATATGTAACATGCATGC+AGG - chr8_1:60176932-60176951 Msa1204390:five_prime_UTR 35.0%
TGGTTCATTTAAACCACGTA+TGG + chr8_1:60177000-60177019 None:intergenic 35.0%
CTGTAATATATCATGCTTCC+AGG + chr8_1:60177030-60177049 None:intergenic 35.0%
GATGCCTATACATTTACAAG+GGG + chr8_1:60177222-60177241 None:intergenic 35.0%
!! TCTTTTTCGTCCCAAAGTAT+TGG - chr8_1:60177240-60177259 Msa1204390:five_prime_UTR 35.0%
TAGGGAATGTCCAATACTTT+GGG + chr8_1:60177253-60177272 None:intergenic 35.0%
ATAGGGAATGTCCAATACTT+TGG + chr8_1:60177254-60177273 None:intergenic 35.0%
TTCCATTTGAAAGGCAAAAC+GGG + chr8_1:60177303-60177322 None:intergenic 35.0%
GGTGTGAAGTGAATGGAATT+TGG + chr8_1:60167928-60167947 None:intergenic 40.0%
! GATCCTTGTGGTTTTTGTGT+GGG + chr8_1:60167949-60167968 None:intergenic 40.0%
! TGATCCTTGTGGTTTTTGTG+TGG + chr8_1:60167950-60167969 None:intergenic 40.0%
GTTAGAGGATTTGATCCTTG+TGG + chr8_1:60167961-60167980 None:intergenic 40.0%
AATAGGAAAAGCGAGGTTAG+AGG + chr8_1:60167976-60167995 None:intergenic 40.0%
GTTATGATCGGTGTGATTTG+CGG + chr8_1:60168075-60168094 None:intergenic 40.0%
! GTCAATCCATTTGGTAGCTT+TGG + chr8_1:60168234-60168253 None:intergenic 40.0%
ATTCGCTAGGTCAATCCATT+TGG + chr8_1:60168243-60168262 None:intergenic 40.0%
! TGATTTGGGCAAAGTATGAG+GGG + chr8_1:60168330-60168349 None:intergenic 40.0%
! GTGATTTGGGCAAAGTATGA+GGG + chr8_1:60168331-60168350 None:intergenic 40.0%
! AGTGATTTGGGCAAAGTATG+AGG + chr8_1:60168332-60168351 None:intergenic 40.0%
GACAGGTTTGATGAGTGATT+TGG + chr8_1:60168345-60168364 None:intergenic 40.0%
!!! AGAATGAACGAGTTTTGGAC+AGG + chr8_1:60168362-60168381 None:intergenic 40.0%
TGTCCAAAACTCGTTCATTC+TGG - chr8_1:60168361-60168380 Msa1204390:intron 40.0%
TAGTTTCTTACCCCAACCAA+CGG + chr8_1:60168395-60168414 None:intergenic 40.0%
ATGCTCACTTGATGTGTATC+AGG - chr8_1:60168534-60168553 Msa1204390:intron 40.0%
GCTCTAATTGAAATGAGTGG+TGG - chr8_1:60168574-60168593 Msa1204390:intron 40.0%
AGTGAGCATCCATGTGTTAA+TGG - chr8_1:60168600-60168619 Msa1204390:intron 40.0%
CATCCATGTGTTAATGGCAA+TGG - chr8_1:60168606-60168625 Msa1204390:intron 40.0%
!!! AGTGGCATTGATTTTTCCTC+CGG + chr8_1:60168955-60168974 None:intergenic 40.0%
TTGACATGTTTGTTCTCGAG+TGG + chr8_1:60168973-60168992 None:intergenic 40.0%
GCTTGGGAGAGTTTATTTAC+AGG + chr8_1:60169210-60169229 None:intergenic 40.0%
ATGATCCCACAGTTATATCG+TGG + chr8_1:60169493-60169512 None:intergenic 40.0%
!! TCCAAAACTTGTTACCTCTC+CGG + chr8_1:60169531-60169550 None:intergenic 40.0%
AAACCTCAAAACCCAACACA+AGG + chr8_1:60169617-60169636 None:intergenic 40.0%
CAAGTGCTCAATGGTAATTG+TGG + chr8_1:60169878-60169897 None:intergenic 40.0%
ATTACCATTGAGCACTTGAC+AGG - chr8_1:60169880-60169899 Msa1204390:intron 40.0%
TTACCATTGAGCACTTGACA+GGG - chr8_1:60169881-60169900 Msa1204390:intron 40.0%
AGGAACTCTATCTCCAACTT+TGG + chr8_1:60169926-60169945 None:intergenic 40.0%
AAAGTTGGAGATAGAGTTCC+TGG - chr8_1:60169925-60169944 Msa1204390:intron 40.0%
TAGTACAGCAAGAGCTGAAA+TGG + chr8_1:60169997-60170016 None:intergenic 40.0%
AGGAAGTGGAACAGAAAGAA+TGG - chr8_1:60170079-60170098 Msa1204390:intron 40.0%
! TATTTGGGGTTTGTGTACCA+TGG - chr8_1:60170111-60170130 Msa1204390:intron 40.0%
ACCATGGTGACTAATTGTGA+TGG - chr8_1:60170127-60170146 Msa1204390:CDS 40.0%
TCCATCACAATTAGTCACCA+TGG + chr8_1:60170131-60170150 None:intergenic 40.0%
CAAGCTTCAGAAGAGTAACA+AGG + chr8_1:60170255-60170274 None:intergenic 40.0%
!! CTTGTTACTCTTCTGAAGCT+TGG - chr8_1:60170253-60170272 Msa1204390:CDS 40.0%
GTGATTGAGATGAATGGAGT+TGG - chr8_1:60170350-60170369 Msa1204390:intron 40.0%
CACTGACCAATACCTATGTT+TGG - chr8_1:60170485-60170504 Msa1204390:intron 40.0%
TCAAGTTCCAAGCATGTCTA+AGG - chr8_1:60170552-60170571 Msa1204390:intron 40.0%
CATCACAGGTAACAAAGACA+TGG - chr8_1:60170729-60170748 Msa1204390:intron 40.0%
ACAGGTAACAAAGACATGGA+AGG - chr8_1:60170733-60170752 Msa1204390:intron 40.0%
GTACCTGGTGTACTAAAGAA+TGG + chr8_1:60170917-60170936 None:intergenic 40.0%
GGTGGGAAAGAATAGAGAAA+TGG + chr8_1:60171235-60171254 None:intergenic 40.0%
!! GCACACAAGATAGTATTGGT+GGG + chr8_1:60171252-60171271 None:intergenic 40.0%
TCAGGCACACAAGATAGTAT+TGG + chr8_1:60171256-60171275 None:intergenic 40.0%
AAGGACTGTGTATGTATGCA+AGG + chr8_1:60171410-60171429 None:intergenic 40.0%
AACAAGAGCTATGCTCAAGT+AGG + chr8_1:60171446-60171465 None:intergenic 40.0%
TCCTTGTATAGATTTGGGCA+AGG - chr8_1:60171472-60171491 Msa1204390:intron 40.0%
CCTTGTATAGATTTGGGCAA+GGG - chr8_1:60171473-60171492 Msa1204390:intron 40.0%
TAATGAACTGCGGAAGTCAA+GGG + chr8_1:60171499-60171518 None:intergenic 40.0%
TTAATGAACTGCGGAAGTCA+AGG + chr8_1:60171500-60171519 None:intergenic 40.0%
GTTCTATCTACAGAGCCTTA+GGG - chr8_1:60171625-60171644 Msa1204390:intron 40.0%
AATCAGCTCCTGTGCAAAAA+AGG - chr8_1:60171707-60171726 Msa1204390:intron 40.0%
GCCCTTTAGCTAGAATGAAA+TGG - chr8_1:60171832-60171851 Msa1204390:CDS 40.0%
GCTAGAATGAAATGGTATCC+TGG - chr8_1:60171840-60171859 Msa1204390:CDS 40.0%
TCAGTTTAGTTGAGGAAAGC+GGG - chr8_1:60171988-60172007 Msa1204390:intron 40.0%
ATGCAGGTAAGAGGAAAGAA+AGG + chr8_1:60172172-60172191 None:intergenic 40.0%
TTGCAGGGCATATTACTCAA+AGG - chr8_1:60172682-60172701 Msa1204390:intron 40.0%
! AAAACAGGGACATTGACTAC+TGG - chr8_1:60172754-60172773 Msa1204390:intron 40.0%
!! TACTGGTGGACTTGTATTCA+AGG - chr8_1:60172771-60172790 Msa1204390:intron 40.0%
AAGGCAATTGAGCCTGTTTA+CGG - chr8_1:60172790-60172809 Msa1204390:intron 40.0%
! CCACAATTGTTACTTGTACG+AGG + chr8_1:60172976-60172995 None:intergenic 40.0%
CCTCGTACAAGTAACAATTG+TGG - chr8_1:60172973-60172992 Msa1204390:intron 40.0%
GTAACAATTGTGGCTGTCAT+TGG - chr8_1:60172983-60173002 Msa1204390:intron 40.0%
ATATAGCACGAACTGCAACA+TGG - chr8_1:60173193-60173212 Msa1204390:intron 40.0%
TAAAATGAATTGCAGGGCTG+TGG - chr8_1:60173253-60173272 Msa1204390:intron 40.0%
CTGTGGTTGAACATAGTGAA+GGG - chr8_1:60173270-60173289 Msa1204390:intron 40.0%
TTTGAGTACTTTCCTGGTAG+AGG - chr8_1:60173323-60173342 Msa1204390:intron 40.0%
TGCTGTTAACAGTAGCAGTA+AGG + chr8_1:60173349-60173368 None:intergenic 40.0%
TGCTACTGTTAACAGCATTG+AGG - chr8_1:60173352-60173371 Msa1204390:intron 40.0%
ACCCAAGTGATGCTTTCAAT+AGG + chr8_1:60173730-60173749 None:intergenic 40.0%
! GGAACATGAAAAGCGTACTT+TGG - chr8_1:60173998-60174017 Msa1204390:intron 40.0%
CTTGTCTCACTGTTTAGTGA+AGG - chr8_1:60174052-60174071 Msa1204390:intron 40.0%
ATTCCTGCCCCAACAAATAT+AGG + chr8_1:60174184-60174203 None:intergenic 40.0%
!! ATGAAGCCAACTTCTAAAGC+TGG + chr8_1:60174242-60174261 None:intergenic 40.0%
!!! TGTGTTTTGTTTGGGAAGAG+GGG + chr8_1:60174327-60174346 None:intergenic 40.0%
AGAGATGATGTTCACAACCA+GGG + chr8_1:60174724-60174743 None:intergenic 40.0%
CCAGAAGGAAAATGTTGACA+AGG + chr8_1:60174759-60174778 None:intergenic 40.0%
! CCTTGTCAACATTTTCCTTC+TGG - chr8_1:60174756-60174775 Msa1204390:intron 40.0%
! CATCAAGTGGTTAGTCAGTA+AGG + chr8_1:60174783-60174802 None:intergenic 40.0%
! TTCCGTGTGATGATGTTAAC+TGG - chr8_1:60174884-60174903 Msa1204390:intron 40.0%
CACCAGTTAACATCATCACA+CGG + chr8_1:60174889-60174908 None:intergenic 40.0%
ACATGACGCAACTTATCTTC+AGG + chr8_1:60174980-60174999 None:intergenic 40.0%
ACCGGGTATGACATGAATTA+TGG + chr8_1:60175205-60175224 None:intergenic 40.0%
GGTACTTAACCATAAGTACC+GGG + chr8_1:60175222-60175241 None:intergenic 40.0%
!!! GGGTACTTTTTGGGTAAGTA+CGG - chr8_1:60175272-60175291 Msa1204390:CDS 40.0%
!!! GGTACTTTTTGGGTAAGTAC+GGG - chr8_1:60175273-60175292 Msa1204390:CDS 40.0%
! CTTTTGTAGCGACACACTAT+TGG - chr8_1:60175921-60175940 Msa1204390:intron 40.0%
TGCATGAACCTACACTGAAA+CGG + chr8_1:60175948-60175967 None:intergenic 40.0%
TTTCAGTGTAGGTTCATGCA+GGG - chr8_1:60175948-60175967 Msa1204390:intron 40.0%
!! TTTACTTTTGTAACAGGGGG+AGG - chr8_1:60176122-60176141 Msa1204390:intron 40.0%
!! GGCTTAATTATGGTTGGTGA+AGG - chr8_1:60176143-60176162 Msa1204390:intron 40.0%
CGAGATTTGGCAATACAGAA+TGG + chr8_1:60176290-60176309 None:intergenic 40.0%
GGCATTGTCTAGCATATTCT+TGG - chr8_1:60176466-60176485 Msa1204390:intron 40.0%
AAATCCCAAAACTGACGGAA+GGG + chr8_1:60176495-60176514 None:intergenic 40.0%
GGAAGAAATCCCAAAACTGA+CGG + chr8_1:60176500-60176519 None:intergenic 40.0%
TGTCATACCGTTATCCACAA+TGG + chr8_1:60176521-60176540 None:intergenic 40.0%
TTACTATTTGTCAGGCTGTC+AGG - chr8_1:60176568-60176587 Msa1204390:intron 40.0%
GAGCTTGAGGATATTTACTG+AGG + chr8_1:60176853-60176872 None:intergenic 40.0%
CAGTAAATATCCTCAAGCTC+TGG - chr8_1:60176853-60176872 Msa1204390:exon 40.0%
ATGCAGGTTCTCTTACATGA+AGG - chr8_1:60176948-60176967 Msa1204390:five_prime_UTR 40.0%
GTGGTTTAAATGAACCATCC+TGG - chr8_1:60177003-60177022 Msa1204390:five_prime_UTR 40.0%
AATCTAGACTCTCCTCTCTT+AGG - chr8_1:60177066-60177085 Msa1204390:five_prime_UTR 40.0%
CTACACACATCACAAATTCG+CGG + chr8_1:60177123-60177142 None:intergenic 40.0%
TCCATTTGAAAGGCAAAACG+GGG + chr8_1:60177302-60177321 None:intergenic 40.0%
! CTTCTCGTGCTGTTATAACA+GGG + chr8_1:60177369-60177388 None:intergenic 40.0%
! ACTTCTCGTGCTGTTATAAC+AGG + chr8_1:60177370-60177389 None:intergenic 40.0%
TGTTATAACAGCACGAGAAG+TGG - chr8_1:60177369-60177388 Msa1204390:five_prime_UTR 40.0%
CTTGTTACGGGTCATTACAG+TGG + chr8_1:60167750-60167769 None:intergenic 45.0%
TTGTGTGGGTGTGAAGTGAA+TGG + chr8_1:60167935-60167954 None:intergenic 45.0%
ACACCCACACAAAAACCACA+AGG - chr8_1:60167943-60167962 Msa1204390:three_prime_UTR 45.0%
ATGTGCGAATAGGAAAAGCG+AGG + chr8_1:60167983-60168002 None:intergenic 45.0%
GAAATTGGGGATGTGCGAAT+AGG + chr8_1:60167993-60168012 None:intergenic 45.0%
ATCGATGATGCGAATCTCAC+TGG - chr8_1:60168182-60168201 Msa1204390:intron 45.0%
GTTTCGCCAAAGCTACCAAA+TGG - chr8_1:60168225-60168244 Msa1204390:intron 45.0%
GCTCTCTCAAGAAATTCGCT+AGG + chr8_1:60168256-60168275 None:intergenic 45.0%
! CGACCAGAATGAACGAGTTT+TGG + chr8_1:60168367-60168386 None:intergenic 45.0%
CTGCCATTGCCATTAACACA+TGG + chr8_1:60168612-60168631 None:intergenic 45.0%
! TTTATGGGGAACGCTTTGGA+AGG - chr8_1:60168646-60168665 Msa1204390:CDS 45.0%
CCTATGTTAGGTTCCACGTT+TGG + chr8_1:60169033-60169052 None:intergenic 45.0%
CCAAACGTGGAACCTAACAT+AGG - chr8_1:60169030-60169049 Msa1204390:intron 45.0%
ATCATGGACGGGAGAGTTAA+TGG - chr8_1:60169141-60169160 Msa1204390:intron 45.0%
TAAACTCTCCCAAGCAGTCT+CGG - chr8_1:60169215-60169234 Msa1204390:intron 45.0%
ATAAGTACCCGAGACTGCTT+GGG + chr8_1:60169226-60169245 None:intergenic 45.0%
TATAAGTACCCGAGACTGCT+TGG + chr8_1:60169227-60169246 None:intergenic 45.0%
TCCTGTCCACGATATAACTG+TGG - chr8_1:60169484-60169503 Msa1204390:intron 45.0%
CCTGTCCACGATATAACTGT+GGG - chr8_1:60169485-60169504 Msa1204390:intron 45.0%
GTGGGATCATATGTCCTTGT+TGG - chr8_1:60169503-60169522 Msa1204390:intron 45.0%
TCATATGTCCTTGTTGGTGC+CGG - chr8_1:60169509-60169528 Msa1204390:intron 45.0%
! CTTCCTTGTGTTGGGTTTTG+AGG - chr8_1:60169611-60169630 Msa1204390:intron 45.0%
TTGCAATCCACAAATGCCAC+GGG + chr8_1:60169718-60169737 None:intergenic 45.0%
GTTGCAATCCACAAATGCCA+CGG + chr8_1:60169719-60169738 None:intergenic 45.0%
! GATTGTGAAGTTTTCCACGG+CGG - chr8_1:60169850-60169869 Msa1204390:intron 45.0%
TACCATTGAGCACTTGACAG+GGG - chr8_1:60169882-60169901 Msa1204390:intron 45.0%
!! ATGTTGGTGGTATGAGGAAG+TGG - chr8_1:60170065-60170084 Msa1204390:intron 45.0%
!! ATCGTTAGTTCTGAGGTTGC+TGG - chr8_1:60170325-60170344 Msa1204390:intron 45.0%
! CTGGTGGTGATTGAGATGAA+TGG - chr8_1:60170344-60170363 Msa1204390:intron 45.0%
GAGATGAATGGAGTTGGAGT+TGG - chr8_1:60170356-60170375 Msa1204390:intron 45.0%
!! AATGGAGTTGGAGTTGGTGT+TGG - chr8_1:60170362-60170381 Msa1204390:intron 45.0%
GGTCAGTGTCATGTGAAACT+TGG + chr8_1:60170473-60170492 None:intergenic 45.0%
ACCTAAACTTCAAAGGTGGC+TGG - chr8_1:60170808-60170827 Msa1204390:intron 45.0%
!! TCCAGCCACCTTTGAAGTTT+AGG + chr8_1:60170812-60170831 None:intergenic 45.0%
CAAAGGTGGCTGGATGAATT+TGG - chr8_1:60170818-60170837 Msa1204390:intron 45.0%
GCGTTACAGCAAAGTTGTTG+TGG - chr8_1:60170844-60170863 Msa1204390:intron 45.0%
TGGCCATTCTTTAGTACACC+AGG - chr8_1:60170911-60170930 Msa1204390:intron 45.0%
GAGGGAAATCTCTGCTTGTA+AGG + chr8_1:60171108-60171127 None:intergenic 45.0%
! GGCACACAAGATAGTATTGG+TGG + chr8_1:60171253-60171272 None:intergenic 45.0%
ACAGCTGGTGCAGTATGAAT+GGG + chr8_1:60171299-60171318 None:intergenic 45.0%
AACAGCTGGTGCAGTATGAA+TGG + chr8_1:60171300-60171319 None:intergenic 45.0%
TTGTTAACAGCCTGAACAGC+TGG + chr8_1:60171314-60171333 None:intergenic 45.0%
ACCCTGCAATTCCTCTCTTA+TGG - chr8_1:60171382-60171401 Msa1204390:CDS 45.0%
GCCATAAGAGAGGAATTGCA+GGG + chr8_1:60171386-60171405 None:intergenic 45.0%
AGCCATAAGAGAGGAATTGC+AGG + chr8_1:60171387-60171406 None:intergenic 45.0%
TATGCAAGGAGCCATAAGAG+AGG + chr8_1:60171396-60171415 None:intergenic 45.0%
CCCTTGCCCAAATCTATACA+AGG + chr8_1:60171476-60171495 None:intergenic 45.0%
TTTGTTGATGCAGCTTGCAG+AGG - chr8_1:60171603-60171622 Msa1204390:intron 45.0%
GGTTCTATCTACAGAGCCTT+AGG - chr8_1:60171624-60171643 Msa1204390:intron 45.0%
ATTGCTGTGGCATATGCCAA+TGG + chr8_1:60171690-60171709 None:intergenic 45.0%
GCACGAATTTCAGAAGATGC+TGG + chr8_1:60171951-60171970 None:intergenic 45.0%
CATGTTTGCATGCAGGTAAG+AGG + chr8_1:60172181-60172200 None:intergenic 45.0%
TGACAGTTACCTCAACTTGC+AGG - chr8_1:60172666-60172685 Msa1204390:intron 45.0%
GACAGTTACCTCAACTTGCA+GGG - chr8_1:60172667-60172686 Msa1204390:intron 45.0%
GTAATATGCCCTGCAAGTTG+AGG + chr8_1:60172678-60172697 None:intergenic 45.0%
CAGGGCATATTACTCAAAGG+TGG - chr8_1:60172685-60172704 Msa1204390:intron 45.0%
ACTCAAAGGTGGACATGTTC+TGG - chr8_1:60172696-60172715 Msa1204390:intron 45.0%
CTAATGCGATGACCGTAAAC+AGG + chr8_1:60172805-60172824 None:intergenic 45.0%
CGGTCATCGCATTAGAAACA+AGG - chr8_1:60172810-60172829 Msa1204390:intron 45.0%
TTGCATTCCCACCTGTGAAA+AGG - chr8_1:60172852-60172871 Msa1204390:intron 45.0%
! AGAGCTTCCTTTTCACAGGT+GGG + chr8_1:60172862-60172881 None:intergenic 45.0%
! AAGAGCTTCCTTTTCACAGG+TGG + chr8_1:60172863-60172882 None:intergenic 45.0%
! AGCAAGAGCTTCCTTTTCAC+AGG + chr8_1:60172866-60172885 None:intergenic 45.0%
!! AAAGGAAGCTCTTGCTGTTG+CGG - chr8_1:60172870-60172889 Msa1204390:intron 45.0%
ATGATACCTTCCAATGGGGT+GGG + chr8_1:60172917-60172936 None:intergenic 45.0%
AATGATACCTTCCAATGGGG+TGG + chr8_1:60172918-60172937 None:intergenic 45.0%
GCTGTGGTTGAACATAGTGA+AGG - chr8_1:60173269-60173288 Msa1204390:intron 45.0%
TTTCAACAGAGACAGAAGGG+AGG + chr8_1:60173301-60173320 None:intergenic 45.0%
TTGTCAAGCACGCAATAGTC+AGG + chr8_1:60173380-60173399 None:intergenic 45.0%
TTGTTATAGTCAGGAGCTGG+AGG - chr8_1:60173698-60173717 Msa1204390:intron 45.0%
! TTAGTGGGATAAGGCTTGGT+TGG - chr8_1:60174381-60174400 Msa1204390:CDS 45.0%
! ATTGTTGTTGTGAACTGGGC+CGG - chr8_1:60174414-60174433 Msa1204390:intron 45.0%
CAGAGATGATGTTCACAACC+AGG + chr8_1:60174725-60174744 None:intergenic 45.0%
ACTGACTAACCACTTGATGC+AGG - chr8_1:60174784-60174803 Msa1204390:intron 45.0%
! AAAGAGAGTTGCAAGTGCTG+TGG - chr8_1:60174925-60174944 Msa1204390:intron 45.0%
! AAGAGAGTTGCAAGTGCTGT+GGG - chr8_1:60174926-60174945 Msa1204390:intron 45.0%
GCAACTTATCTTCAGGCTTC+AGG + chr8_1:60174973-60174992 None:intergenic 45.0%
CATGTCATACCCGGTACTTA+TGG - chr8_1:60175210-60175229 Msa1204390:CDS 45.0%
CTATTGGTCCGTTTCAGTGT+AGG - chr8_1:60175937-60175956 Msa1204390:intron 45.0%
GTTTCAGTGTAGGTTCATGC+AGG - chr8_1:60175947-60175966 Msa1204390:intron 45.0%
AACAGGGGGAGGCTTAATTA+TGG - chr8_1:60176133-60176152 Msa1204390:intron 45.0%
TGAAGTTGTCTGCCGAGATT+TGG + chr8_1:60176303-60176322 None:intergenic 45.0%
GAAATCCCAAAACTGACGGA+AGG + chr8_1:60176496-60176515 None:intergenic 45.0%
! AAATATCCTCAAGCTCTGGC+TGG - chr8_1:60176857-60176876 Msa1204390:exon 45.0%
CAGGTTCTCTTACATGAAGG+CGG - chr8_1:60176951-60176970 Msa1204390:five_prime_UTR 45.0%
GGAGTTGAGACAAACAAGCA+AGG + chr8_1:60176979-60176998 None:intergenic 45.0%
GTTTGTCTCAACTCCATACG+TGG - chr8_1:60176984-60177003 Msa1204390:five_prime_UTR 45.0%
TAAATGAACCATCCTGGTCC+TGG - chr8_1:60177009-60177028 Msa1204390:five_prime_UTR 45.0%
TATATCATGCTTCCAGGACC+AGG + chr8_1:60177024-60177043 None:intergenic 45.0%
AAGGCAAAACGGGGGTTAAA+GGG + chr8_1:60177293-60177312 None:intergenic 45.0%
AAAGGCAAAACGGGGGTTAA+AGG + chr8_1:60177294-60177313 None:intergenic 45.0%
CCATTTGAAAGGCAAAACGG+GGG + chr8_1:60177301-60177320 None:intergenic 45.0%
!!! TTTTCAATATATATTATTTT+AGG - chr8_1:60170276-60170295 Msa1204390:CDS 5.0%
!!! ATTTTTACTAAATAAATAAT+AGG + chr8_1:60175243-60175262 None:intergenic 5.0%
CATTCTGGTCGCATTTCCGT+TGG - chr8_1:60168376-60168395 Msa1204390:intron 50.0%
! TGGTCGCATTTCCGTTGGTT+GGG - chr8_1:60168381-60168400 Msa1204390:intron 50.0%
CTTCTGATCGAAGACGTCTC+TGG - chr8_1:60168479-60168498 Msa1204390:intron 50.0%
AAACTCTCCCAAGCAGTCTC+GGG - chr8_1:60169216-60169235 Msa1204390:intron 50.0%
CCCACAGTTATATCGTGGAC+AGG + chr8_1:60169488-60169507 None:intergenic 50.0%
! GCCGGAGAGGTAACAAGTTT+TGG - chr8_1:60169527-60169546 Msa1204390:intron 50.0%
GCTTGGATATGCTAAACCCG+TGG - chr8_1:60169699-60169718 Msa1204390:intron 50.0%
TGCTAAACCCGTGGCATTTG+TGG - chr8_1:60169708-60169727 Msa1204390:intron 50.0%
TTCCCCTGTCAAGTGCTCAA+TGG + chr8_1:60169887-60169906 None:intergenic 50.0%
! AAACCTCTGGAGGCCAAAGT+TGG - chr8_1:60169910-60169929 Msa1204390:intron 50.0%
GTTGGAGATAGAGTTCCTGG+CGG - chr8_1:60169928-60169947 Msa1204390:intron 50.0%
!! GTTAGTTCTGAGGTTGCTGG+TGG - chr8_1:60170328-60170347 Msa1204390:intron 50.0%
!! GGAGTTGGTGTTGGTGTTGT+TGG - chr8_1:60170371-60170390 Msa1204390:intron 50.0%
CAGCTGGTGCAGTATGAATG+GGG + chr8_1:60171298-60171317 None:intergenic 50.0%
TCATACTGCACCAGCTGTTC+AGG - chr8_1:60171301-60171320 Msa1204390:intron 50.0%
TTCTCTGCTCATCTGCTGTG+AGG - chr8_1:60171348-60171367 Msa1204390:CDS 50.0%
CTCATCTGCTGTGAGGATTG+AGG - chr8_1:60171355-60171374 Msa1204390:CDS 50.0%
AGTAGGCTGCAGGAGTAGAA+AGG + chr8_1:60171429-60171448 None:intergenic 50.0%
! ACAGGGACATTGACTACTGG+TGG - chr8_1:60172757-60172776 Msa1204390:intron 50.0%
ACAGGGCAGTACAACTGTAC+TGG - chr8_1:60173952-60173971 Msa1204390:intron 50.0%
! GCACCTATATTTGTTGGGGC+AGG - chr8_1:60174178-60174197 Msa1204390:intron 50.0%
TGGGAAGAGGGGCAGAAAAA+GGG + chr8_1:60174316-60174335 None:intergenic 50.0%
TTGGGAAGAGGGGCAGAAAA+AGG + chr8_1:60174317-60174336 None:intergenic 50.0%
ATCTGCTAACCCCGCTTAGT+GGG - chr8_1:60174366-60174385 Msa1204390:CDS 50.0%
TAACCCCGCTTAGTGGGATA+AGG - chr8_1:60174372-60174391 Msa1204390:CDS 50.0%
! AAGCCTTATCCCACTAAGCG+GGG + chr8_1:60174378-60174397 None:intergenic 50.0%
! CAAGCCTTATCCCACTAAGC+GGG + chr8_1:60174379-60174398 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+CGG + chr8_1:60174380-60174399 None:intergenic 50.0%
GGCCTCTTAATCTGTTAGGC+CGG + chr8_1:60174436-60174455 None:intergenic 50.0%
ATGATGTTCACAACCAGGGC+CGG + chr8_1:60174720-60174739 None:intergenic 50.0%
GTTAGTCAGTAAGGCCCAGA+AGG + chr8_1:60174774-60174793 None:intergenic 50.0%
TCAACGTGACCTGCATCAAG+TGG + chr8_1:60174796-60174815 None:intergenic 50.0%
!! CGTTGATTCACCTGGAGGAT+AGG - chr8_1:60174810-60174829 Msa1204390:intron 50.0%
ACATCAAAAACCCCTGGACG+AGG + chr8_1:60174836-60174855 None:intergenic 50.0%
! TGCAACTGCGCTACACCTTT+TGG - chr8_1:60175883-60175902 Msa1204390:intron 50.0%
GGGGGAGGCTTAATTATGGT+TGG - chr8_1:60176137-60176156 Msa1204390:intron 50.0%
! CACTTGCTGCTGCAACTGTT+GGG - chr8_1:60176183-60176202 Msa1204390:intron 50.0%
ATCTCGGCAGACAACTTCAC+TGG - chr8_1:60176304-60176323 Msa1204390:intron 50.0%
!! TGGCTCTGGCATACATCTGT+TGG - chr8_1:60176365-60176384 Msa1204390:intron 50.0%
! GGCTCTGGCATACATCTGTT+GGG - chr8_1:60176366-60176385 Msa1204390:intron 50.0%
! GCTTCCCTTCCGTCAGTTTT+GGG - chr8_1:60176488-60176507 Msa1204390:intron 50.0%
! CCCCCGTTTTGCCTTTCAAA+TGG - chr8_1:60177298-60177317 Msa1204390:five_prime_UTR 50.0%
CTGGTCGCATTTCCGTTGGT+TGG - chr8_1:60168380-60168399 Msa1204390:intron 55.0%
! GGTCGCATTTCCGTTGGTTG+GGG - chr8_1:60168382-60168401 Msa1204390:intron 55.0%
!! ATGGGGAACGCTTTGGAAGG+AGG - chr8_1:60168649-60168668 Msa1204390:CDS 55.0%
!! TGGGGAACGCTTTGGAAGGA+GGG - chr8_1:60168650-60168669 Msa1204390:CDS 55.0%
TATCGTGGACAGGAACCCTC+TGG + chr8_1:60169478-60169497 None:intergenic 55.0%
TTACCTCTCCGGCACCAACA+AGG + chr8_1:60169520-60169539 None:intergenic 55.0%
GACAGGGGAAGTCAAACCTC+TGG - chr8_1:60169897-60169916 Msa1204390:intron 55.0%
AGGGGAAGTCAAACCTCTGG+AGG - chr8_1:60169900-60169919 Msa1204390:intron 55.0%
TCTCCAACTTTGGCCTCCAG+AGG + chr8_1:60169916-60169935 None:intergenic 55.0%
ATAGAGTTCCTGGCGGTGCA+AGG - chr8_1:60169935-60169954 Msa1204390:intron 55.0%
TCTATGTTCCTTGCACCGCC+AGG + chr8_1:60169946-60169965 None:intergenic 55.0%
GGCGGTGCAAGGAACATAGA+TGG - chr8_1:60169946-60169965 Msa1204390:intron 55.0%
GCTATGCTCAAGTAGGCTGC+AGG + chr8_1:60171439-60171458 None:intergenic 55.0%
CTACAGAGCCTTAGGGCTCA+TGG - chr8_1:60171632-60171651 Msa1204390:intron 55.0%
TGCTGCAACCATGAGCCCTA+AGG + chr8_1:60171643-60171662 None:intergenic 55.0%
TGCAGCATCACCATGTGCCT+TGG - chr8_1:60171656-60171675 Msa1204390:intron 55.0%
ATCACCATGTGCCTTGGCTG+TGG - chr8_1:60171662-60171681 Msa1204390:intron 55.0%
TGCACAGGAGCTGATTGCTG+TGG + chr8_1:60171703-60171722 None:intergenic 55.0%
TGTTGCGGCAGCCATGGAAA+AGG - chr8_1:60172885-60172904 Msa1204390:intron 55.0%
GTTGCGGCAGCCATGGAAAA+GGG - chr8_1:60172886-60172905 Msa1204390:intron 55.0%
! GTGGGTAGTGCCCTTTTCCA+TGG + chr8_1:60172899-60172918 None:intergenic 55.0%
GTAGCAGTAAGGCCTCTACC+AGG + chr8_1:60173338-60173357 None:intergenic 55.0%
GATCTGCTAACCCCGCTTAG+TGG - chr8_1:60174365-60174384 Msa1204390:CDS 55.0%
CCGCTTAGTGGGATAAGGCT+TGG - chr8_1:60174377-60174396 Msa1204390:CDS 55.0%
GGCCGGCCTAACAGATTAAG+AGG - chr8_1:60174431-60174450 Msa1204390:intron 55.0%
TGCGACCTAAAGCCCTTGCT+TGG - chr8_1:60174677-60174696 Msa1204390:intron 55.0%
GCGACCTAAAGCCCTTGCTT+GGG - chr8_1:60174678-60174697 Msa1204390:intron 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr8_1:60174685-60174704 None:intergenic 55.0%
!! GCAGGTCACGTTGATTCACC+TGG - chr8_1:60174802-60174821 Msa1204390:intron 55.0%
!! GGTCACGTTGATTCACCTGG+AGG - chr8_1:60174805-60174824 Msa1204390:intron 55.0%
ACAGTTGCAGCAGCAAGTGC+TGG + chr8_1:60176182-60176201 None:intergenic 55.0%
! GCACTTGCTGCTGCAACTGT+TGG - chr8_1:60176182-60176201 Msa1204390:intron 55.0%
! GGCTTCCCTTCCGTCAGTTT+TGG - chr8_1:60176487-60176506 Msa1204390:intron 55.0%
AAGCAACCAGCCAGAGCTTG+AGG + chr8_1:60176866-60176885 None:intergenic 55.0%
TCATGCTTCCAGGACCAGGA+TGG + chr8_1:60177020-60177039 None:intergenic 55.0%
!! TGTCCTTGTTGGTGCCGGAG+AGG - chr8_1:60169514-60169533 Msa1204390:intron 60.0%
TGGTAATTGTGGCACCGCCG+TGG + chr8_1:60169867-60169886 None:intergenic 60.0%
TGCCTTGGCTGTGGCTCCAT+TGG - chr8_1:60171671-60171690 Msa1204390:intron 60.0%
TGCCAATGGAGCCACAGCCA+AGG + chr8_1:60171676-60171695 None:intergenic 60.0%
!! TCTTGCTGTTGCGGCAGCCA+TGG - chr8_1:60172879-60172898 Msa1204390:intron 60.0%
!! AAGGGCACTACCCACCCCAT+TGG - chr8_1:60172904-60172923 Msa1204390:intron 60.0%
GCACTACCCACCCCATTGGA+AGG - chr8_1:60172908-60172927 Msa1204390:intron 60.0%
! AAGCCCTTGCTTGGGTTGCC+TGG - chr8_1:60174686-60174705 Msa1204390:intron 60.0%
CACAACCAGGGCCGGTCTAA+GGG + chr8_1:60174712-60174731 None:intergenic 60.0%
TCACAACCAGGGCCGGTCTA+AGG + chr8_1:60174713-60174732 None:intergenic 60.0%
TGGAGGATAGGCCTCGTCCA+GGG - chr8_1:60174822-60174841 Msa1204390:intron 60.0%
GGAGCCACAGCCAAGGCACA+TGG + chr8_1:60171669-60171688 None:intergenic 65.0%
GGGCCAGGCAACCCAAGCAA+GGG + chr8_1:60174692-60174711 None:intergenic 65.0%
AGGGCCAGGCAACCCAAGCA+AGG + chr8_1:60174693-60174712 None:intergenic 65.0%
GGGTTGCCTGGCCCTTAGAC+CGG - chr8_1:60174698-60174717 Msa1204390:intron 65.0%
CTGGACGAGGCCTATCCTCC+AGG + chr8_1:60174823-60174842 None:intergenic 65.0%
CTGGAGGATAGGCCTCGTCC+AGG - chr8_1:60174821-60174840 Msa1204390:intron 65.0%
GGAGGATAGGCCTCGTCCAG+GGG - chr8_1:60174823-60174842 Msa1204390:intron 65.0%
CCAGGGCCGGTCTAAGGGCC+AGG + chr8_1:60174707-60174726 None:intergenic 75.0%
CCTGGCCCTTAGACCGGCCC+TGG - chr8_1:60174704-60174723 Msa1204390:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 60167745 60177398 60167745 ID=Msa1204390;Name=Msa1204390
chr8_1 mRNA 60167745 60177398 60167745 ID=Msa1204390-mRNA-1;Parent=Msa1204390;Name=Msa1204390-mRNA-1;_AED=0.17;_eAED=0.17;_QI=541|0.81|0.91|1|0.90|0.91|12|265|637
chr8_1 exon 60167745 60168189 60167745 ID=Msa1204390-mRNA-1:exon:19502;Parent=Msa1204390-mRNA-1
chr8_1 exon 60168611 60168697 60168611 ID=Msa1204390-mRNA-1:exon:19501;Parent=Msa1204390-mRNA-1
chr8_1 exon 60168818 60169005 60168818 ID=Msa1204390-mRNA-1:exon:19500;Parent=Msa1204390-mRNA-1
chr8_1 exon 60170121 60170337 60170121 ID=Msa1204390-mRNA-1:exon:19499;Parent=Msa1204390-mRNA-1
chr8_1 exon 60171302 60171436 60171302 ID=Msa1204390-mRNA-1:exon:19498;Parent=Msa1204390-mRNA-1
chr8_1 exon 60171770 60171875 60171770 ID=Msa1204390-mRNA-1:exon:19497;Parent=Msa1204390-mRNA-1
chr8_1 exon 60172214 60172455 60172214 ID=Msa1204390-mRNA-1:exon:19496;Parent=Msa1204390-mRNA-1
chr8_1 exon 60173415 60173527 60173415 ID=Msa1204390-mRNA-1:exon:19495;Parent=Msa1204390-mRNA-1
chr8_1 exon 60174211 60174406 60174211 ID=Msa1204390-mRNA-1:exon:19494;Parent=Msa1204390-mRNA-1
chr8_1 exon 60175159 60175305 60175159 ID=Msa1204390-mRNA-1:exon:19493;Parent=Msa1204390-mRNA-1
chr8_1 exon 60175608 60175792 60175608 ID=Msa1204390-mRNA-1:exon:19492;Parent=Msa1204390-mRNA-1
chr8_1 exon 60176740 60177398 60176740 ID=Msa1204390-mRNA-1:exon:19491;Parent=Msa1204390-mRNA-1
chr8_1 five_prime_UTR 60176858 60177398 60176858 ID=Msa1204390-mRNA-1:five_prime_utr;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60176740 60176857 60176740 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60175608 60175792 60175608 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60175159 60175305 60175159 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60174211 60174406 60174211 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60173415 60173527 60173415 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60172214 60172455 60172214 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60171770 60171875 60171770 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60171302 60171436 60171302 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60170121 60170337 60170121 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60168818 60169005 60168818 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60168611 60168697 60168611 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 CDS 60168010 60168189 60168010 ID=Msa1204390-mRNA-1:cds;Parent=Msa1204390-mRNA-1
chr8_1 three_prime_UTR 60167745 60168009 60167745 ID=Msa1204390-mRNA-1:three_prime_utr;Parent=Msa1204390-mRNA-1
Gene Sequence

>Msa1204390

ATGTTGCGTATCAACTGCTTTGTTTGTTGCTGCAGCTATTTCCCCTCATACTTTGCCCAAATCACTCATCAAACCTGTCCAAAACTCGTTCATTCTGGTCGCATTTCCGTTGGTTGGGCTGAAGAGTATTTCACAAGTCGTTCAATGGTTGATGTTAAAGAGTTGAAGGAGAACAATCCAGAATTTGCACTTGTTCTTGATACAAAAGATAATAAACTTCCTAATACATTTGATTTCAAATACCAGAGGGTTCCTGTCCACGATATAACTGTGGGATCATATGTCCTTGTTGGTGCCGGAGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCACGGCGGTGCCACAATTACCATTGAGCACTTGACAGGGGAAGTCAAACCTCTGGAGGCCAAAGTTGGAGATAGAGTTCCTGGCGGTGCAAGGAACATAGATGGTAGAATAATTGTGAAGGTAACAAAGACATGGAAGGAATCAACTCTAAGCAAAATTGTGCAGTTGACTGAAGAAGCTCAGTTGAATAGACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAGCGTTACAGCAAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTCTTGGTCCACTTGTATTTAAGTGGCCATTCTTTAGTACACCAGCTTGCAGAGGTTCTATCTACAGAGCCTTAGGGCTCATGGTTGCAGCATCACCATGTGCCTTGGCTGTGGCTCCATTGGCATATGCCACAGCAATCAGCTCCTGTGCAAAAAAGGGCATATTACTCAAAGGTGGACATGTTCTGGATGCACTAGCTTCATGCCATACCATTGCATTTGATAAAACAGGGACATTGACTACTGGTGGACTTGTATTCAAGGCAATTGAGCCTGTTTACGGTCATCGCATTAGAAACAAGGAATCAAACATATCTTCTTGTTGCATTCCCACCTGTGAAAAGGAAGCTCTTGCTGTTGCGGCAGCCATGGAAAAGGGCACTACCCACCCCATTGGAAGGGCTGTGGTTGAACATAGTGAAGGGAAAGACCTCCCTTCTGTCTCTGTTGAAAATTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACAGCATTGAGTCAGGAGCTGGAGGTGCTAACCTATTGAAAGCATCACTTGGGTCTATAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAATCAAAAAAGGTCAAGGAAGCTATTAATGCATCTTCTTATGGCAGTGAATTTGTCACGTTGATTCACCTGGAGGATAGGCCTCGTCCAGGGGTTTTTGATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTCCGTGTGATGATGTTAACTGGTGATCATGAATATAGTGCAAAGAGAGTTGCAAGTGCTGTGGGTATCAGAGAGTTTCATTGCAACCTGAAGCCTGAAGATAAGTTGCGTCATGTAAAGGATATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATTAATGATGCTCCAGCACTTGCTGCTGCAACTGTTGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCTATAGCTGTTGCAGATGTGCTGTTGCTTCGTGAAAATATTTCTGCAGTGCCATTCTGTATTGCCAAATCTCGGCAGACAACTTCACTGATTAAGCAAAATGTAGCTCTGGCATTGTCTAGCATATTCTTGGCTTCCCTTCCGTCAGTTTTGGGATTTCTTCCATTGTGGATAACGGTTCTCTTACATGAAGGCGGAACCTTGCTTGTTTGTCTCAACTCCATACGTGGTTTAAATGAACCATCCTGGTCCTGGAAGCATGATATATTACAGTTGATTGGCAAGGTTAAATCTAGACTCTCCTCTCTTAGGACAAATATAACAGGCTCAAGTAGCATTACAACCGCGAATTTGTGA
Protein sequence

>Msa1204390

MLRINCFVCCCSYFPSYFAQITHQTCPKLVHSGRISVGWAEEYFTSRSMVDVKELKENNPEFALVLDTKDNKLPNTFDFKYQRVPVHDITVGSYVLVGAGESVPVDCEVFHGGATITIEHLTGEVKPLEAKVGDRVPGGARNIDGRIIVKVTKTWKESTLSKIVQLTEEAQLNRPKLQRWLDEFGERYSKVVVVLSIAIAVLGPLVFKWPFFSTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAIEPVYGHRIRNKESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVEHSEGKDLPSVSVENFEYFPGRGLTATVNSIESGAGGANLLKASLGSIDFITSFCQSEDESKKVKEAINASSYGSEFVTLIHLEDRPRPGVFDVIQELQDEAKFRVMMLTGDHEYSAKRVASAVGIREFHCNLKPEDKLRHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFLASLPSVLGFLPLWITVLLHEGGTLLVCLNSIRGLNEPSWSWKHDILQLIGKVKSRLSSLRTNITGSSSITTANL*