Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156820 | XP_003624319.1 | 99.505 | 202 | 1 | 0 | 1 | 202 | 1 | 202 | 4.68e-148 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156820 | sp|P28188|RAD2A_ARATH | 91.626 | 203 | 16 | 1 | 1 | 202 | 1 | 203 | 2.99e-140 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156820 | G7KU87 | 99.505 | 202 | 1 | 0 | 1 | 202 | 1 | 202 | 2.24e-148 | 419 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004480 | Msa1156820 | 0.835576 | 1.548462e-56 | -8.615850e-47 |
| Msa0011050 | Msa1156820 | 0.809576 | 1.767805e-50 | -8.615850e-47 |
| Msa0030480 | Msa1156820 | 0.809669 | 1.687708e-50 | -8.615850e-47 |
| Msa0048390 | Msa1156820 | 0.802764 | 4.805243e-49 | -8.615850e-47 |
| Msa0060070 | Msa1156820 | 0.808408 | 3.143729e-50 | -8.615850e-47 |
| Msa0071480 | Msa1156820 | 0.810561 | 1.084096e-50 | -8.615850e-47 |
| Msa0081940 | Msa1156820 | 0.819849 | 9.355176e-53 | -8.615850e-47 |
| Msa0082050 | Msa1156820 | 0.816285 | 5.983013e-52 | -8.615850e-47 |
| Msa0119440 | Msa1156820 | 0.826065 | 3.327642e-54 | -8.615850e-47 |
| Msa0697680 | Msa1156820 | 0.822346 | 2.488204e-53 | -8.615850e-47 |
| Msa0737430 | Msa1156820 | 0.824000 | 1.023084e-53 | -8.615850e-47 |
| Msa0748660 | Msa1156820 | 0.813922 | 2.002891e-51 | -8.615850e-47 |
| Msa0750810 | Msa1156820 | 0.805531 | 1.276241e-49 | -8.615850e-47 |
| Msa0758250 | Msa1156820 | 0.803707 | 3.065238e-49 | -8.615850e-47 |
| Msa0769720 | Msa1156820 | 0.803498 | 3.388352e-49 | -8.615850e-47 |
| Msa0794350 | Msa1156820 | 0.801466 | 8.887795e-49 | -8.615850e-47 |
| Msa0839450 | Msa1156820 | 0.806429 | 8.261759e-50 | -8.615850e-47 |
| Msa0128430 | Msa1156820 | 0.825760 | 3.931948e-54 | -8.615850e-47 |
| Msa0138900 | Msa1156820 | 0.810625 | 1.050277e-50 | -8.615850e-47 |
| Msa0151220 | Msa1156820 | 0.837575 | 4.795377e-57 | -8.615850e-47 |
| Msa0162690 | Msa1156820 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
| Msa0179100 | Msa1156820 | 0.821850 | 3.242809e-53 | -8.615850e-47 |
| Msa0187310 | Msa1156820 | 0.831632 | 1.495516e-55 | -8.615850e-47 |
| Msa0213430 | Msa1156820 | 0.813445 | 2.549927e-51 | -8.615850e-47 |
| Msa0364790 | Msa1156820 | 0.811583 | 6.509527e-51 | -8.615850e-47 |
| Msa0380600 | Msa1156820 | 0.806207 | 9.200298e-50 | -8.615850e-47 |
| Msa0430240 | Msa1156820 | 0.807945 | 3.943734e-50 | -8.615850e-47 |
| Msa0437070 | Msa1156820 | 0.801679 | 8.034919e-49 | -8.615850e-47 |
| Msa0472770 | Msa1156820 | 0.809649 | 1.704282e-50 | -8.615850e-47 |
| Msa1030030 | Msa1156820 | 0.820439 | 6.854599e-53 | -8.615850e-47 |
| Msa1063370 | Msa1156820 | 0.821570 | 3.764147e-53 | -8.615850e-47 |
| Msa1063410 | Msa1156820 | 0.810145 | 1.332928e-50 | -8.615850e-47 |
| Msa1074110 | Msa1156820 | 0.801091 | 1.060141e-48 | -8.615850e-47 |
| Msa0259440 | Msa1156820 | 0.821113 | 4.798171e-53 | -8.615850e-47 |
| Msa0259580 | Msa1156820 | 0.815009 | 1.151378e-51 | -8.615850e-47 |
| Msa0260530 | Msa1156820 | 0.809799 | 1.582435e-50 | -8.615850e-47 |
| Msa0265270 | Msa1156820 | 0.800342 | 1.507521e-48 | -8.615850e-47 |
| Msa0266220 | Msa1156820 | 0.818264 | 2.146238e-52 | -8.615850e-47 |
| Msa0287680 | Msa1156820 | 0.824255 | 8.912682e-54 | -8.615850e-47 |
| Msa0305620 | Msa1156820 | 0.848386 | 6.335233e-60 | -8.615850e-47 |
| Msa1108720 | Msa1156820 | 0.832119 | 1.133826e-55 | -8.615850e-47 |
| Msa1131090 | Msa1156820 | 0.839286 | 1.735516e-57 | -8.615850e-47 |
| Msa1152410 | Msa1156820 | 0.804351 | 2.252282e-49 | -8.615850e-47 |
| Msa1156820 | Msa1214170 | 0.812395 | 4.332057e-51 | -8.615850e-47 |
| Msa1156820 | Msa1218160 | 0.812544 | 4.018971e-51 | -8.615850e-47 |
| Msa1156820 | Msa1260060 | 0.820713 | 5.929418e-53 | -8.615850e-47 |
| Msa1156820 | Msa1285200 | 0.828271 | 9.862427e-55 | -8.615850e-47 |
| Msa1156820 | Msa1298100 | 0.831505 | 1.607213e-55 | -8.615850e-47 |
| Msa1156820 | Msa1349860 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
| Msa1156820 | Msa1350700 | 0.822184 | 2.712904e-53 | -8.615850e-47 |
| Msa1156820 | Msa1360020 | 0.813705 | 2.235897e-51 | -8.615850e-47 |
| Msa1156820 | Msa1360260 | 0.826167 | 3.147579e-54 | -8.615850e-47 |
| Msa1156820 | Msa1366550 | 0.809170 | 2.160320e-50 | -8.615850e-47 |
| Msa1156820 | Msa1399260 | 0.803699 | 3.078180e-49 | -8.615850e-47 |
| Msa1156820 | Msa1421900 | 0.824285 | 8.769078e-54 | -8.615850e-47 |
| Msa1156820 | Msa1463030 | 0.805798 | 1.121711e-49 | -8.615850e-47 |
| Msa0500400 | Msa1156820 | 0.803785 | 2.953538e-49 | -8.615850e-47 |
| Msa0572750 | Msa1156820 | 0.817250 | 3.634543e-52 | -8.615850e-47 |
| Msa0583670 | Msa1156820 | 0.809168 | 2.162063e-50 | -8.615850e-47 |
| Msa0584580 | Msa1156820 | 0.803143 | 4.012183e-49 | -8.615850e-47 |
| Msa0860250 | Msa1156820 | 0.812589 | 3.929186e-51 | -8.615850e-47 |
| Msa0863990 | Msa1156820 | 0.815160 | 1.065749e-51 | -8.615850e-47 |
| Msa0865970 | Msa1156820 | 0.812942 | 3.289278e-51 | -8.615850e-47 |
| Msa0866070 | Msa1156820 | 0.806663 | 7.372960e-50 | -8.615850e-47 |
| Msa0968050 | Msa1156820 | 0.834938 | 2.244280e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156820 | MtrunA17_Chr7g0250531 | 99.505 | 202 | 1 | 0 | 1 | 202 | 1 | 202 | 4.31e-152 | 419 |
| Msa1156820 | MtrunA17_Chr8g0335471 | 94.089 | 203 | 11 | 1 | 1 | 202 | 1 | 203 | 1.39e-143 | 398 |
| Msa1156820 | MtrunA17_Chr4g0055651 | 88.614 | 202 | 23 | 0 | 1 | 202 | 1 | 202 | 6.76e-138 | 383 |
| Msa1156820 | MtrunA17_Chr2g0276931 | 77.273 | 198 | 44 | 1 | 4 | 200 | 5 | 202 | 3.10e-114 | 323 |
| Msa1156820 | MtrunA17_Chr4g0030911 | 62.439 | 205 | 67 | 4 | 4 | 200 | 11 | 213 | 3.91e-88 | 258 |
| Msa1156820 | MtrunA17_Chr1g0212521 | 60.488 | 205 | 72 | 3 | 4 | 200 | 11 | 214 | 5.52e-87 | 255 |
| Msa1156820 | MtrunA17_Chr1g0182321 | 61.058 | 208 | 70 | 4 | 4 | 202 | 11 | 216 | 9.76e-87 | 254 |
| Msa1156820 | MtrunA17_Chr1g0182301 | 60.577 | 208 | 71 | 4 | 4 | 202 | 11 | 216 | 4.13e-86 | 253 |
| Msa1156820 | MtrunA17_Chr7g0263071 | 61.058 | 208 | 70 | 4 | 4 | 202 | 11 | 216 | 5.38e-86 | 253 |
| Msa1156820 | MtrunA17_Chr2g0327911 | 54.902 | 204 | 81 | 4 | 5 | 200 | 12 | 212 | 2.05e-75 | 226 |
| Msa1156820 | MtrunA17_Chr4g0032201 | 45.972 | 211 | 105 | 2 | 1 | 202 | 5 | 215 | 5.04e-65 | 199 |
| Msa1156820 | MtrunA17_Chr2g0276941 | 46.667 | 210 | 101 | 2 | 4 | 202 | 11 | 220 | 2.55e-62 | 192 |
| Msa1156820 | MtrunA17_Chr6g0458081 | 47.619 | 210 | 96 | 3 | 5 | 201 | 3 | 211 | 3.25e-62 | 192 |
| Msa1156820 | MtrunA17_Chr2g0290891 | 46.411 | 209 | 100 | 1 | 5 | 201 | 3 | 211 | 7.86e-62 | 191 |
| Msa1156820 | MtrunA17_Chr2g0283131 | 47.393 | 211 | 101 | 1 | 2 | 202 | 7 | 217 | 1.23e-61 | 191 |
| Msa1156820 | MtrunA17_Chr8g0384311 | 49.254 | 201 | 97 | 4 | 4 | 200 | 9 | 208 | 1.56e-60 | 187 |
| Msa1156820 | MtrunA17_Chr4g0046261 | 45.972 | 211 | 104 | 1 | 2 | 202 | 7 | 217 | 2.83e-60 | 187 |
| Msa1156820 | MtrunA17_Chr7g0234201 | 47.549 | 204 | 98 | 1 | 7 | 201 | 12 | 215 | 2.97e-60 | 187 |
| Msa1156820 | MtrunA17_Chr2g0315551 | 46.919 | 211 | 102 | 2 | 2 | 202 | 7 | 217 | 4.58e-60 | 187 |
| Msa1156820 | MtrunA17_Chr7g0265001 | 48.515 | 202 | 99 | 4 | 5 | 201 | 13 | 214 | 5.54e-60 | 186 |
| Msa1156820 | MtrunA17_Chr3g0112681 | 45.283 | 212 | 106 | 3 | 1 | 202 | 5 | 216 | 1.36e-59 | 186 |
| Msa1156820 | MtrunA17_Chr4g0040781 | 45.972 | 211 | 104 | 1 | 2 | 202 | 7 | 217 | 1.48e-59 | 186 |
| Msa1156820 | MtrunA17_Chr1g0159481 | 50.739 | 203 | 94 | 5 | 4 | 201 | 13 | 214 | 5.21e-59 | 184 |
| Msa1156820 | MtrunA17_Chr3g0123821 | 43.868 | 212 | 106 | 2 | 2 | 200 | 10 | 221 | 3.34e-58 | 182 |
| Msa1156820 | MtrunA17_Chr2g0325091 | 45.972 | 211 | 105 | 1 | 1 | 202 | 4 | 214 | 1.36e-57 | 181 |
| Msa1156820 | MtrunA17_Chr7g0231131 | 43.602 | 211 | 107 | 2 | 2 | 200 | 9 | 219 | 1.84e-57 | 180 |
| Msa1156820 | MtrunA17_Chr1g0189361 | 45.283 | 212 | 100 | 3 | 6 | 201 | 12 | 223 | 2.36e-57 | 180 |
| Msa1156820 | MtrunA17_Chr8g0381841 | 50.595 | 168 | 83 | 0 | 2 | 169 | 11 | 178 | 6.90e-57 | 179 |
| Msa1156820 | MtrunA17_Chr8g0349711 | 52.147 | 163 | 78 | 0 | 7 | 169 | 5 | 167 | 9.53e-57 | 178 |
| Msa1156820 | MtrunA17_Chr2g0319951 | 46.445 | 211 | 100 | 3 | 4 | 202 | 9 | 218 | 1.26e-56 | 178 |
| Msa1156820 | MtrunA17_Chr1g0174281 | 48.889 | 180 | 91 | 1 | 2 | 181 | 9 | 187 | 2.70e-56 | 177 |
| Msa1156820 | MtrunA17_Chr8g0392931 | 47.170 | 212 | 101 | 3 | 1 | 201 | 7 | 218 | 9.75e-56 | 176 |
| Msa1156820 | MtrunA17_Chr1g0180291 | 47.761 | 201 | 99 | 5 | 5 | 200 | 11 | 210 | 1.80e-55 | 175 |
| Msa1156820 | MtrunA17_Chr3g0130271 | 47.525 | 202 | 100 | 5 | 4 | 200 | 8 | 208 | 2.07e-55 | 175 |
| Msa1156820 | MtrunA17_Chr8g0349681 | 47.692 | 195 | 94 | 1 | 5 | 199 | 381 | 567 | 2.59e-55 | 184 |
| Msa1156820 | MtrunA17_Chr8g0349681 | 48.214 | 168 | 87 | 0 | 2 | 169 | 169 | 336 | 7.87e-51 | 172 |
| Msa1156820 | MtrunA17_Chr8g0349681 | 49.383 | 162 | 82 | 0 | 7 | 168 | 12 | 173 | 6.29e-49 | 167 |
| Msa1156820 | MtrunA17_Chr8g0351861 | 49.123 | 171 | 87 | 0 | 6 | 176 | 14 | 184 | 6.42e-55 | 174 |
| Msa1156820 | MtrunA17_Chr8g0346421 | 43.434 | 198 | 112 | 0 | 1 | 198 | 19 | 216 | 9.94e-55 | 174 |
| Msa1156820 | MtrunA17_Chr1g0197331 | 48.529 | 204 | 101 | 4 | 2 | 201 | 9 | 212 | 1.45e-54 | 172 |
| Msa1156820 | MtrunA17_Chr6g0482721 | 45.918 | 196 | 104 | 1 | 1 | 196 | 5 | 198 | 3.74e-54 | 172 |
| Msa1156820 | MtrunA17_Chr7g0214241 | 49.133 | 173 | 88 | 0 | 7 | 179 | 14 | 186 | 6.17e-54 | 171 |
| Msa1156820 | MtrunA17_Chr7g0275991 | 43.590 | 195 | 108 | 1 | 6 | 198 | 18 | 212 | 1.09e-53 | 171 |
| Msa1156820 | MtrunA17_Chr3g0109721 | 40.625 | 192 | 111 | 1 | 10 | 201 | 12 | 200 | 5.21e-48 | 155 |
| Msa1156820 | MtrunA17_Chr5g0433561 | 40.104 | 192 | 112 | 1 | 10 | 201 | 12 | 200 | 1.32e-46 | 152 |
| Msa1156820 | MtrunA17_Chr8g0382221 | 38.500 | 200 | 113 | 2 | 9 | 201 | 10 | 206 | 5.84e-44 | 145 |
| Msa1156820 | MtrunA17_Chr8g0390561 | 39.175 | 194 | 110 | 3 | 10 | 201 | 11 | 198 | 8.44e-44 | 145 |
| Msa1156820 | MtrunA17_Chr1g0199331 | 42.236 | 161 | 92 | 1 | 10 | 169 | 33 | 193 | 1.44e-42 | 142 |
| Msa1156820 | MtrunA17_Chr3g0123971 | 42.857 | 161 | 92 | 0 | 9 | 169 | 10 | 170 | 3.43e-42 | 141 |
| Msa1156820 | MtrunA17_Chr5g0400131 | 40.994 | 161 | 95 | 0 | 9 | 169 | 10 | 170 | 6.76e-42 | 140 |
| Msa1156820 | MtrunA17_Chr4g0055081 | 36.683 | 199 | 117 | 2 | 9 | 201 | 10 | 205 | 3.40e-41 | 138 |
| Msa1156820 | MtrunA17_Chr2g0331691 | 37.811 | 201 | 114 | 5 | 8 | 200 | 10 | 207 | 1.28e-38 | 132 |
| Msa1156820 | MtrunA17_Chr4g0034871 | 38.500 | 200 | 112 | 6 | 8 | 199 | 8 | 204 | 1.75e-38 | 131 |
| Msa1156820 | MtrunA17_Chr4g0004661 | 37.811 | 201 | 114 | 5 | 8 | 200 | 64 | 261 | 1.07e-37 | 131 |
| Msa1156820 | MtrunA17_Chr6g0466301 | 35.897 | 195 | 113 | 4 | 8 | 190 | 8 | 202 | 6.61e-35 | 122 |
| Msa1156820 | MtrunA17_Chr6g0465491 | 35.897 | 195 | 113 | 4 | 8 | 190 | 8 | 202 | 6.61e-35 | 122 |
| Msa1156820 | MtrunA17_Chr8g0383261 | 38.554 | 166 | 95 | 3 | 8 | 166 | 12 | 177 | 5.70e-34 | 120 |
| Msa1156820 | MtrunA17_Chr1g0201121 | 37.500 | 168 | 98 | 3 | 8 | 168 | 8 | 175 | 9.26e-34 | 119 |
| Msa1156820 | MtrunA17_Chr3g0138101 | 30.108 | 186 | 117 | 4 | 9 | 188 | 14 | 192 | 4.84e-23 | 92.0 |
| Msa1156820 | MtrunA17_Chr3g0138121 | 30.108 | 186 | 117 | 4 | 9 | 188 | 14 | 192 | 4.99e-23 | 92.0 |
| Msa1156820 | MtrunA17_Chr6g0465471 | 35.099 | 151 | 91 | 3 | 25 | 168 | 7 | 157 | 5.09e-23 | 91.7 |
| Msa1156820 | MtrunA17_Chr3g0138111 | 30.108 | 186 | 117 | 4 | 9 | 188 | 14 | 192 | 5.32e-23 | 92.0 |
| Msa1156820 | MtrunA17_Chr6g0466161 | 35.099 | 151 | 91 | 3 | 25 | 168 | 7 | 157 | 5.59e-23 | 91.7 |
| Msa1156820 | MtrunA17_Chr4g0037021 | 32.934 | 167 | 98 | 6 | 8 | 162 | 6 | 170 | 3.72e-22 | 89.4 |
| Msa1156820 | MtrunA17_Chr8g0371501 | 33.136 | 169 | 99 | 6 | 8 | 164 | 6 | 172 | 5.16e-22 | 89.0 |
| Msa1156820 | MtrunA17_Chr6g0486041 | 31.138 | 167 | 101 | 5 | 8 | 162 | 6 | 170 | 8.89e-22 | 88.6 |
| Msa1156820 | MtrunA17_Chr4g0046211 | 34.959 | 123 | 77 | 3 | 8 | 129 | 6 | 126 | 1.31e-21 | 86.3 |
| Msa1156820 | MtrunA17_Chr2g0325101 | 30.769 | 169 | 103 | 5 | 8 | 164 | 6 | 172 | 1.41e-21 | 87.8 |
| Msa1156820 | MtrunA17_Chr3g0117931 | 30.769 | 182 | 107 | 6 | 8 | 177 | 8 | 182 | 2.68e-21 | 87.4 |
| Msa1156820 | MtrunA17_Chr5g0405791 | 32.544 | 169 | 100 | 6 | 8 | 164 | 6 | 172 | 2.82e-21 | 87.0 |
| Msa1156820 | MtrunA17_Chr1g0178291 | 34.682 | 173 | 103 | 4 | 5 | 177 | 428 | 590 | 5.44e-20 | 87.4 |
| Msa1156820 | MtrunA17_Chr6g0466431 | 35.354 | 99 | 55 | 1 | 8 | 106 | 8 | 97 | 5.96e-17 | 73.2 |
| Msa1156820 | MtrunA17_Chr6g0465611 | 35.354 | 99 | 55 | 1 | 8 | 106 | 8 | 97 | 5.96e-17 | 73.2 |
| Msa1156820 | MtrunA17_Chr5g0434561 | 34.375 | 160 | 87 | 6 | 9 | 159 | 20 | 170 | 1.32e-14 | 68.9 |
| Msa1156820 | MtrunA17_Chr5g0401071 | 30.189 | 159 | 101 | 5 | 9 | 162 | 20 | 173 | 8.70e-12 | 61.2 |
| Msa1156820 | MtrunA17_Chr2g0331841 | 42.373 | 59 | 34 | 0 | 77 | 135 | 2 | 60 | 2.20e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1156820 | AT1G02130.1 | 91.626 | 203 | 16 | 1 | 1 | 202 | 1 | 203 | 3.04e-141 | 392 |
| Msa1156820 | AT4G17530.1 | 87.129 | 202 | 26 | 0 | 1 | 202 | 1 | 202 | 4.20e-136 | 379 |
| Msa1156820 | AT5G47200.1 | 87.129 | 202 | 26 | 0 | 1 | 202 | 1 | 202 | 4.44e-135 | 377 |
| Msa1156820 | AT3G11730.1 | 75.369 | 203 | 47 | 2 | 1 | 200 | 1 | 203 | 5.58e-112 | 318 |
| Msa1156820 | AT5G59840.1 | 61.836 | 207 | 70 | 4 | 4 | 202 | 11 | 216 | 1.06e-87 | 257 |
| Msa1156820 | AT3G46060.2 | 60.870 | 207 | 72 | 4 | 4 | 202 | 11 | 216 | 2.93e-86 | 254 |
| Msa1156820 | AT3G46060.3 | 60.870 | 207 | 72 | 4 | 4 | 202 | 11 | 216 | 2.93e-86 | 254 |
| Msa1156820 | AT3G46060.1 | 60.870 | 207 | 72 | 4 | 4 | 202 | 11 | 216 | 2.93e-86 | 254 |
| Msa1156820 | AT3G53610.2 | 59.903 | 207 | 74 | 3 | 4 | 202 | 11 | 216 | 4.84e-86 | 253 |
| Msa1156820 | AT3G53610.3 | 59.903 | 207 | 74 | 3 | 4 | 202 | 11 | 216 | 4.84e-86 | 253 |
| Msa1156820 | AT3G53610.1 | 59.903 | 207 | 74 | 3 | 4 | 202 | 11 | 216 | 4.84e-86 | 253 |
| Msa1156820 | AT5G03520.1 | 61.951 | 205 | 70 | 3 | 4 | 201 | 11 | 214 | 1.29e-83 | 247 |
| Msa1156820 | AT3G09900.1 | 60.870 | 207 | 71 | 3 | 4 | 201 | 11 | 216 | 5.79e-83 | 245 |
| Msa1156820 | AT4G17160.1 | 48.039 | 204 | 96 | 2 | 5 | 200 | 3 | 204 | 1.34e-64 | 198 |
| Msa1156820 | AT5G03520.2 | 58.434 | 166 | 61 | 3 | 43 | 201 | 40 | 204 | 2.74e-63 | 195 |
| Msa1156820 | AT1G07410.1 | 45.238 | 210 | 107 | 2 | 1 | 202 | 5 | 214 | 4.29e-63 | 195 |
| Msa1156820 | AT4G35860.1 | 54.545 | 165 | 75 | 0 | 5 | 169 | 3 | 167 | 4.35e-63 | 195 |
| Msa1156820 | AT4G18430.1 | 49.048 | 210 | 97 | 2 | 2 | 201 | 7 | 216 | 1.99e-62 | 193 |
| Msa1156820 | AT4G17170.1 | 46.890 | 209 | 99 | 2 | 5 | 201 | 3 | 211 | 6.86e-62 | 192 |
| Msa1156820 | AT5G60860.1 | 47.867 | 211 | 100 | 1 | 2 | 202 | 7 | 217 | 8.93e-62 | 191 |
| Msa1156820 | AT1G09630.1 | 46.977 | 215 | 96 | 3 | 2 | 202 | 6 | 216 | 1.66e-61 | 191 |
| Msa1156820 | AT1G06400.1 | 46.190 | 210 | 104 | 2 | 2 | 202 | 7 | 216 | 3.10e-61 | 190 |
| Msa1156820 | AT3G46830.1 | 44.131 | 213 | 108 | 1 | 1 | 202 | 5 | 217 | 1.16e-60 | 189 |
| Msa1156820 | AT3G46830.2 | 44.131 | 213 | 108 | 1 | 1 | 202 | 5 | 217 | 1.16e-60 | 189 |
| Msa1156820 | AT3G07410.1 | 52.571 | 175 | 83 | 0 | 6 | 180 | 10 | 184 | 1.85e-60 | 188 |
| Msa1156820 | AT5G47520.1 | 47.143 | 210 | 98 | 2 | 6 | 202 | 12 | 221 | 3.64e-60 | 187 |
| Msa1156820 | AT3G15060.1 | 46.919 | 211 | 102 | 1 | 2 | 202 | 7 | 217 | 4.86e-60 | 187 |
| Msa1156820 | AT5G45750.1 | 47.596 | 208 | 100 | 2 | 4 | 202 | 9 | 216 | 1.01e-59 | 186 |
| Msa1156820 | AT1G16920.1 | 47.115 | 208 | 101 | 3 | 4 | 202 | 9 | 216 | 1.92e-59 | 186 |
| Msa1156820 | AT5G59150.1 | 42.254 | 213 | 112 | 1 | 1 | 202 | 5 | 217 | 2.87e-59 | 185 |
| Msa1156820 | AT1G28550.1 | 45.714 | 210 | 103 | 2 | 4 | 202 | 9 | 218 | 4.57e-59 | 185 |
| Msa1156820 | AT2G43130.1 | 46.569 | 204 | 101 | 3 | 6 | 201 | 10 | 213 | 5.43e-59 | 184 |
| Msa1156820 | AT2G33870.1 | 45.714 | 210 | 103 | 2 | 4 | 202 | 9 | 218 | 5.45e-59 | 184 |
| Msa1156820 | AT3G12160.1 | 44.811 | 212 | 103 | 3 | 2 | 200 | 9 | 219 | 1.73e-58 | 183 |
| Msa1156820 | AT4G39990.1 | 45.933 | 209 | 101 | 3 | 6 | 202 | 15 | 223 | 2.58e-58 | 183 |
| Msa1156820 | AT1G05810.1 | 46.154 | 208 | 101 | 2 | 6 | 202 | 10 | 217 | 2.61e-58 | 183 |
| Msa1156820 | AT5G47960.1 | 52.663 | 169 | 80 | 0 | 1 | 169 | 8 | 176 | 3.95e-58 | 182 |
| Msa1156820 | AT4G18800.1 | 47.087 | 206 | 102 | 2 | 4 | 202 | 9 | 214 | 4.20e-58 | 182 |
| Msa1156820 | AT1G05810.2 | 46.154 | 208 | 101 | 2 | 6 | 202 | 56 | 263 | 5.69e-58 | 183 |
| Msa1156820 | AT5G65270.1 | 44.340 | 212 | 103 | 3 | 6 | 202 | 15 | 226 | 1.84e-57 | 181 |
| Msa1156820 | AT1G43890.3 | 56.805 | 169 | 70 | 3 | 3 | 169 | 8 | 175 | 2.00e-57 | 180 |
| Msa1156820 | AT1G43890.1 | 56.805 | 169 | 70 | 3 | 3 | 169 | 8 | 175 | 2.00e-57 | 180 |
| Msa1156820 | AT1G43890.2 | 56.805 | 169 | 70 | 3 | 3 | 169 | 8 | 175 | 2.00e-57 | 180 |
| Msa1156820 | AT2G31680.1 | 49.714 | 175 | 88 | 0 | 6 | 180 | 10 | 184 | 6.46e-57 | 179 |
| Msa1156820 | AT5G03530.2 | 49.505 | 202 | 96 | 4 | 5 | 201 | 10 | 210 | 2.09e-56 | 177 |
| Msa1156820 | AT5G03530.1 | 49.505 | 202 | 96 | 4 | 5 | 201 | 10 | 210 | 2.09e-56 | 177 |
| Msa1156820 | AT1G73640.1 | 47.525 | 202 | 97 | 3 | 4 | 196 | 9 | 210 | 7.36e-56 | 177 |
| Msa1156820 | AT1G18200.1 | 50.857 | 175 | 86 | 0 | 2 | 176 | 7 | 181 | 3.52e-55 | 175 |
| Msa1156820 | AT4G19640.1 | 42.188 | 192 | 108 | 1 | 10 | 201 | 12 | 200 | 6.88e-49 | 158 |
| Msa1156820 | AT1G01200.1 | 42.786 | 201 | 112 | 2 | 1 | 198 | 21 | 221 | 7.72e-49 | 159 |
| Msa1156820 | AT5G45130.1 | 41.237 | 194 | 107 | 3 | 10 | 201 | 12 | 200 | 5.40e-46 | 150 |
| Msa1156820 | AT3G09910.5 | 48.066 | 181 | 90 | 4 | 5 | 183 | 10 | 188 | 6.18e-46 | 150 |
| Msa1156820 | AT3G09910.4 | 48.066 | 181 | 90 | 4 | 5 | 183 | 10 | 188 | 6.18e-46 | 150 |
| Msa1156820 | AT3G09910.3 | 45.320 | 203 | 99 | 5 | 5 | 202 | 10 | 205 | 8.20e-46 | 150 |
| Msa1156820 | AT3G09910.1 | 45.320 | 203 | 99 | 5 | 5 | 202 | 10 | 205 | 8.20e-46 | 150 |
| Msa1156820 | AT3G09910.2 | 45.320 | 203 | 99 | 5 | 5 | 202 | 10 | 205 | 8.20e-46 | 150 |
| Msa1156820 | AT5G45130.2 | 40.625 | 192 | 107 | 3 | 12 | 201 | 22 | 208 | 2.57e-44 | 147 |
| Msa1156820 | AT2G44610.1 | 37.879 | 198 | 118 | 1 | 9 | 201 | 10 | 207 | 3.21e-43 | 144 |
| Msa1156820 | AT4G35860.2 | 53.333 | 120 | 56 | 0 | 50 | 169 | 2 | 121 | 7.24e-43 | 142 |
| Msa1156820 | AT3G54840.1 | 44.805 | 154 | 84 | 1 | 10 | 162 | 35 | 188 | 1.26e-42 | 142 |
| Msa1156820 | AT3G54840.2 | 44.805 | 154 | 84 | 1 | 10 | 162 | 35 | 188 | 1.53e-42 | 142 |
| Msa1156820 | AT3G54840.3 | 44.444 | 153 | 84 | 1 | 11 | 162 | 2 | 154 | 2.67e-42 | 140 |
| Msa1156820 | AT2G22290.1 | 36.683 | 199 | 118 | 2 | 9 | 201 | 10 | 206 | 4.19e-41 | 139 |
| Msa1156820 | AT4G39890.1 | 40.741 | 162 | 95 | 1 | 9 | 169 | 10 | 171 | 1.02e-40 | 138 |
| Msa1156820 | AT5G10260.1 | 36.041 | 197 | 121 | 1 | 9 | 200 | 10 | 206 | 5.99e-40 | 135 |
| Msa1156820 | AT5G59150.2 | 39.024 | 164 | 89 | 1 | 50 | 202 | 3 | 166 | 1.04e-39 | 134 |
| Msa1156820 | AT5G64990.1 | 40.964 | 166 | 98 | 0 | 9 | 174 | 8 | 173 | 3.08e-39 | 134 |
| Msa1156820 | AT3G18820.1 | 39.000 | 200 | 111 | 5 | 8 | 199 | 8 | 204 | 3.39e-39 | 134 |
| Msa1156820 | AT1G52280.1 | 37.198 | 207 | 119 | 5 | 1 | 199 | 1 | 204 | 9.36e-39 | 132 |
| Msa1156820 | AT3G16100.1 | 37.500 | 200 | 114 | 5 | 8 | 199 | 8 | 204 | 2.75e-38 | 131 |
| Msa1156820 | AT1G49300.2 | 40.476 | 168 | 93 | 3 | 8 | 168 | 8 | 175 | 3.19e-37 | 129 |
| Msa1156820 | AT1G49300.1 | 40.476 | 168 | 93 | 3 | 8 | 168 | 8 | 175 | 3.19e-37 | 129 |
| Msa1156820 | AT5G64990.2 | 39.306 | 173 | 98 | 1 | 9 | 174 | 8 | 180 | 2.05e-36 | 127 |
| Msa1156820 | AT4G19640.3 | 45.038 | 131 | 72 | 0 | 10 | 140 | 12 | 142 | 2.59e-36 | 126 |
| Msa1156820 | AT2G21880.1 | 39.157 | 166 | 94 | 3 | 8 | 166 | 9 | 174 | 3.27e-36 | 126 |
| Msa1156820 | AT4G09720.1 | 36.683 | 199 | 119 | 3 | 8 | 199 | 8 | 206 | 1.14e-35 | 124 |
| Msa1156820 | AT4G19640.2 | 45.600 | 125 | 68 | 0 | 10 | 134 | 12 | 136 | 2.58e-35 | 122 |
| Msa1156820 | AT1G22740.1 | 34.804 | 204 | 111 | 5 | 8 | 199 | 8 | 201 | 7.99e-34 | 120 |
| Msa1156820 | AT4G09720.4 | 34.804 | 204 | 121 | 3 | 8 | 199 | 8 | 211 | 1.33e-33 | 119 |
| Msa1156820 | AT4G09720.3 | 33.810 | 210 | 121 | 3 | 8 | 199 | 8 | 217 | 1.30e-32 | 117 |
| Msa1156820 | AT5G39620.1 | 38.182 | 165 | 95 | 3 | 9 | 166 | 6 | 170 | 3.99e-30 | 110 |
| Msa1156820 | AT2G21880.4 | 40.146 | 137 | 75 | 3 | 37 | 166 | 13 | 149 | 3.47e-28 | 105 |
| Msa1156820 | AT2G21880.3 | 40.146 | 137 | 75 | 3 | 37 | 166 | 13 | 149 | 3.47e-28 | 105 |
| Msa1156820 | AT4G09720.6 | 37.059 | 170 | 100 | 3 | 37 | 199 | 3 | 172 | 5.98e-28 | 103 |
| Msa1156820 | AT4G09720.5 | 37.059 | 170 | 100 | 3 | 37 | 199 | 3 | 172 | 5.98e-28 | 103 |
| Msa1156820 | AT4G09720.2 | 37.059 | 170 | 100 | 3 | 37 | 199 | 3 | 172 | 5.98e-28 | 103 |
| Msa1156820 | AT2G21880.2 | 34.337 | 166 | 94 | 4 | 8 | 166 | 9 | 166 | 2.17e-26 | 100 |
| Msa1156820 | AT4G35020.1 | 34.320 | 169 | 97 | 6 | 8 | 164 | 6 | 172 | 6.26e-24 | 94.4 |
| Msa1156820 | AT4G35020.2 | 34.320 | 169 | 97 | 6 | 8 | 164 | 6 | 172 | 6.26e-24 | 94.4 |
| Msa1156820 | AT4G35020.3 | 34.320 | 169 | 97 | 6 | 8 | 164 | 6 | 172 | 6.26e-24 | 94.4 |
| Msa1156820 | AT5G55080.1 | 32.121 | 165 | 101 | 3 | 9 | 169 | 14 | 171 | 9.68e-24 | 94.4 |
| Msa1156820 | AT2G44690.1 | 32.934 | 167 | 98 | 5 | 8 | 162 | 18 | 182 | 3.81e-23 | 92.4 |
| Msa1156820 | AT3G51300.1 | 34.132 | 167 | 96 | 6 | 10 | 164 | 8 | 172 | 3.88e-23 | 92.0 |
| Msa1156820 | AT5G55190.1 | 29.891 | 184 | 120 | 4 | 9 | 188 | 14 | 192 | 1.49e-22 | 91.3 |
| Msa1156820 | AT2G17800.2 | 33.728 | 169 | 98 | 6 | 8 | 164 | 6 | 172 | 1.64e-22 | 90.5 |
| Msa1156820 | AT2G17800.1 | 33.728 | 169 | 98 | 6 | 8 | 164 | 6 | 172 | 1.64e-22 | 90.5 |
| Msa1156820 | AT5G20010.1 | 29.670 | 182 | 123 | 3 | 9 | 188 | 14 | 192 | 1.72e-22 | 90.9 |
| Msa1156820 | AT5G46025.1 | 42.056 | 107 | 61 | 1 | 70 | 175 | 6 | 112 | 2.87e-22 | 87.4 |
| Msa1156820 | AT5G20020.1 | 30.435 | 161 | 109 | 2 | 9 | 169 | 14 | 171 | 4.40e-22 | 90.1 |
| Msa1156820 | AT4G35950.1 | 33.136 | 169 | 99 | 6 | 8 | 164 | 6 | 172 | 5.08e-22 | 89.4 |
| Msa1156820 | AT4G28950.1 | 29.703 | 202 | 121 | 8 | 8 | 199 | 6 | 196 | 5.68e-22 | 89.4 |
| Msa1156820 | AT1G75840.1 | 31.361 | 169 | 102 | 5 | 8 | 164 | 6 | 172 | 5.88e-22 | 89.0 |
| Msa1156820 | AT5G45970.1 | 31.737 | 167 | 100 | 6 | 8 | 162 | 6 | 170 | 1.43e-21 | 88.2 |
| Msa1156820 | AT3G48040.1 | 30.769 | 169 | 103 | 5 | 8 | 164 | 8 | 174 | 1.17e-20 | 85.9 |
| Msa1156820 | AT1G20090.1 | 30.178 | 169 | 104 | 5 | 8 | 164 | 5 | 171 | 2.24e-20 | 84.7 |
| Msa1156820 | AT3G48040.2 | 34.146 | 123 | 78 | 3 | 8 | 129 | 8 | 128 | 1.69e-19 | 82.0 |
| Msa1156820 | AT5G62880.1 | 29.940 | 167 | 103 | 5 | 8 | 162 | 8 | 172 | 6.07e-19 | 81.6 |
| Msa1156820 | AT5G62880.2 | 33.333 | 123 | 79 | 3 | 8 | 129 | 8 | 128 | 1.65e-18 | 79.7 |
| Msa1156820 | AT4G35020.4 | 35.965 | 114 | 70 | 3 | 10 | 122 | 8 | 119 | 2.70e-18 | 78.2 |
| Msa1156820 | AT4G35020.5 | 35.965 | 114 | 70 | 3 | 10 | 122 | 8 | 119 | 2.70e-18 | 78.2 |
| Msa1156820 | AT3G49870.2 | 35.366 | 164 | 86 | 7 | 9 | 162 | 1 | 154 | 1.37e-14 | 68.9 |
| Msa1156820 | AT3G49870.1 | 35.366 | 164 | 86 | 7 | 9 | 162 | 20 | 173 | 4.05e-14 | 68.2 |
| Msa1156820 | AT5G67560.1 | 35.366 | 164 | 86 | 7 | 9 | 162 | 20 | 173 | 6.71e-14 | 67.4 |
| Msa1156820 | AT3G51290.2 | 33.803 | 142 | 80 | 6 | 35 | 164 | 634 | 773 | 1.20e-13 | 69.3 |
| Msa1156820 | AT5G37680.1 | 32.500 | 160 | 90 | 6 | 9 | 159 | 20 | 170 | 3.21e-13 | 65.5 |
| Msa1156820 | AT2G15310.1 | 31.731 | 104 | 63 | 4 | 10 | 113 | 19 | 114 | 6.32e-11 | 59.7 |
Find 79 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTTTGAATATACTTAA+TGG | 0.174533 | 7_4:+45357514 | Msa1156820:three_prime_UTR |
| AAATGTCGAACAGGCATTTA+TGG | 0.216366 | 7_4:+45356464 | Msa1156820:CDS |
| TTTGCACTTGTCTCCATAAA+AGG | 0.231314 | 7_4:-45356432 | None:intergenic |
| CAGGCATTTGCAGATGAAAT+AGG | 0.278594 | 7_4:+45356405 | Msa1156820:intron |
| CAGCTGGGCAAGAACGATTT+AGG | 0.305104 | 7_4:+45355933 | Msa1156820:CDS |
| ACATACGATTTGGAGCTTAA+TGG | 0.308951 | 7_4:-45355705 | None:intergenic |
| ATATTCTGATCTATTTCATT+TGG | 0.351848 | 7_4:+45357384 | Msa1156820:three_prime_UTR |
| GGAGGCCTTGCATTGTTTGT+AGG | 0.364796 | 7_4:-45357296 | None:intergenic |
| TTGAGATGATTTGATTTGTA+TGG | 0.367702 | 7_4:-45353815 | None:intergenic |
| TTATTATATGACTAAAATAG+TGG | 0.376437 | 7_4:+45357443 | Msa1156820:three_prime_UTR |
| TAAGAATTTGTCTGGTGGTT+TGG | 0.380376 | 7_4:+45357473 | Msa1156820:three_prime_UTR |
| ATATGAGTACCTATCCTTGA+TGG | 0.381024 | 7_4:-45356499 | None:intergenic |
| AAGTGAGGAACATACTATTC+AGG | 0.384451 | 7_4:-45354022 | None:intergenic |
| GGTGATCGGCGAGTTGTTGC+CGG | 0.399092 | 7_4:-45353976 | None:intergenic |
| GAAAATCCGCACAGTTGAAC+AGG | 0.426213 | 7_4:+45355673 | Msa1156820:intron |
| CCCCTTATCTGCACTGTTGG+AGG | 0.429950 | 7_4:-45357314 | None:intergenic |
| CATTAAGTATATTCAAAGAA+TGG | 0.430659 | 7_4:-45357513 | None:intergenic |
| TGATGAGAAACGCGTGGAAA+AGG | 0.435614 | 7_4:-45353865 | None:intergenic |
| GGCCTCCAACAGTGCAGATA+AGG | 0.443333 | 7_4:+45357312 | Msa1156820:CDS |
| GCCTTGCATTGTTTGTAGGT+TGG | 0.450220 | 7_4:-45357292 | None:intergenic |
| GCCTCCAACAGTGCAGATAA+GGG | 0.451383 | 7_4:+45357313 | Msa1156820:CDS |
| AATCAGAAGGAATCGGTTGT+TGG | 0.457586 | 7_4:-45353903 | None:intergenic |
| TTTGAATATACTTAATGGTA+TGG | 0.458603 | 7_4:+45357519 | Msa1156820:three_prime_UTR |
| ATTAAGTATATTCAAAGAAT+GGG | 0.468341 | 7_4:-45357512 | None:intergenic |
| GGATTCTACAAATGTCGAAC+AGG | 0.469392 | 7_4:+45356455 | Msa1156820:CDS |
| GGCAATGGCTTCTTCCATCA+AGG | 0.481447 | 7_4:+45356485 | Msa1156820:CDS |
| GATGAGAAACGCGTGGAAAA+GGG | 0.488049 | 7_4:-45353864 | None:intergenic |
| TTGATTGGAGACTCTGGTGT+TGG | 0.492888 | 7_4:+45354596 | Msa1156820:CDS |
| AATGTTAACAAGCTCTTGGT+TGG | 0.494106 | 7_4:+45356173 | Msa1156820:CDS |
| TGATAATGTTAACAAGCTCT+TGG | 0.495654 | 7_4:+45356169 | Msa1156820:CDS |
| AGGGAGAGTTCGTCGGAGAT+TGG | 0.497417 | 7_4:-45353953 | None:intergenic |
| AGCTACTACCGTGGGGCACA+TGG | 0.500719 | 7_4:+45355968 | Msa1156820:CDS |
| TGTCCCCTTATCTGCACTGT+TGG | 0.505248 | 7_4:-45357317 | None:intergenic |
| GACCAATGTAAGAATTTGTC+TGG | 0.517933 | 7_4:+45357465 | Msa1156820:three_prime_UTR |
| CATATGTAGTGGGATACAGC+TGG | 0.519499 | 7_4:+45355917 | Msa1156820:intron |
| CAGCCAGTTGGCCAGAAAAG+TGG | 0.520499 | 7_4:+45357338 | Msa1156820:CDS |
| CGAACAGGCATTTATGGCAA+TGG | 0.532623 | 7_4:+45356470 | Msa1156820:CDS |
| CTCGAGAAATCAGAAGGAAT+CGG | 0.534082 | 7_4:-45353910 | None:intergenic |
| GGAGATTGGTGCAGTAGCGG+TGG | 0.534801 | 7_4:-45353939 | None:intergenic |
| TGAGATGATTTGATTTGTAT+GGG | 0.538464 | 7_4:-45353814 | None:intergenic |
| TGCCCCACGGTAGTAGCTAC+TGG | 0.542749 | 7_4:-45355963 | None:intergenic |
| GACAGCTACATAAGCACCAT+TGG | 0.547410 | 7_4:+45355558 | Msa1156820:CDS |
| TTCAAAGAATGGGATCATCT+AGG | 0.551286 | 7_4:-45357502 | None:intergenic |
| CACCAGACAAATTCTTACAT+TGG | 0.551916 | 7_4:-45357467 | None:intergenic |
| TTCATGTCTGAAAGAGTGAA+AGG | 0.553749 | 7_4:-45353998 | None:intergenic |
| CGATTCCTTCTGATTTCTCG+AGG | 0.554834 | 7_4:+45353911 | Msa1156820:five_prime_UTR |
| GTGGAAAAGGGGATTAAATA+CGG | 0.557298 | 7_4:-45353852 | None:intergenic |
| AGCCAGTTGGCCAGAAAAGT+GGG | 0.560192 | 7_4:+45357339 | Msa1156820:CDS |
| CAGATAAGGGGACAGCCAGT+TGG | 0.562181 | 7_4:+45357326 | Msa1156820:CDS |
| ATCCGCACAGTTGAACAGGA+TGG | 0.566980 | 7_4:+45355677 | Msa1156820:CDS |
| GATGATTTGATTTGTATGGG+TGG | 0.575103 | 7_4:-45353811 | None:intergenic |
| TTACAGCAAATCTGAGCAGA+AGG | 0.577201 | 7_4:-45354628 | None:intergenic |
| TGAAAGAGTGAAAGGGTGAT+CGG | 0.581681 | 7_4:-45353990 | None:intergenic |
| GAGATTGGTGCAGTAGCGGT+GGG | 0.590006 | 7_4:-45353938 | None:intergenic |
| TCCCATCCTGTTCAACTGTG+CGG | 0.594596 | 7_4:-45355679 | None:intergenic |
| GCCAACCTACAAACAATGCA+AGG | 0.594963 | 7_4:+45357291 | Msa1156820:CDS |
| TGGCTTCTTCCATCAAGGAT+AGG | 0.595319 | 7_4:+45356490 | Msa1156820:CDS |
| TTGCCGGAGGGAGAGTTCGT+CGG | 0.597494 | 7_4:-45353960 | None:intergenic |
| TCATGTCTGAAAGAGTGAAA+GGG | 0.603002 | 7_4:-45353997 | None:intergenic |
| ATGAGAAACGCGTGGAAAAG+GGG | 0.607847 | 7_4:-45353863 | None:intergenic |
| GCTCGAAATGAAACAAAGGC+AGG | 0.610954 | 7_4:-45357583 | None:intergenic |
| GTCGGAGATTGGTGCAGTAG+CGG | 0.610962 | 7_4:-45353942 | None:intergenic |
| CAATGTAAGAATTTGTCTGG+TGG | 0.611546 | 7_4:+45357468 | Msa1156820:three_prime_UTR |
| ACTTACAAAATCAACTCCAA+TGG | 0.612564 | 7_4:-45355574 | None:intergenic |
| ATATGTAGTGGGATACAGCT+GGG | 0.616758 | 7_4:+45355918 | Msa1156820:intron |
| GCTTCAATAATGTGAAGCAA+TGG | 0.626631 | 7_4:+45356120 | Msa1156820:CDS |
| GATCGGCGAGTTGTTGCCGG+AGG | 0.627251 | 7_4:-45353973 | None:intergenic |
| GTTAACCTCGAGAAATCAGA+AGG | 0.628467 | 7_4:-45353916 | None:intergenic |
| CCTCCAACAGTGCAGATAAG+GGG | 0.629255 | 7_4:+45357314 | Msa1156820:CDS |
| TCACCAGTAGCTACTACCGT+GGG | 0.632543 | 7_4:+45355960 | Msa1156820:CDS |
| TCTCCGACGAACTCTCCCTC+CGG | 0.636987 | 7_4:+45353957 | Msa1156820:five_prime_UTR |
| CAATGATTCCATGTGCCCCA+CGG | 0.637566 | 7_4:-45355976 | None:intergenic |
| ATCACCAGTAGCTACTACCG+TGG | 0.643184 | 7_4:+45355959 | Msa1156820:CDS |
| TCAAGCTCGAAATGAAACAA+AGG | 0.646200 | 7_4:-45357587 | None:intergenic |
| ATCGGCGAGTTGTTGCCGGA+GGG | 0.654115 | 7_4:-45353972 | None:intergenic |
| AAATAGATCAGAATATCTTG+TGG | 0.668102 | 7_4:-45357377 | None:intergenic |
| TTGATATGATGAGAAACGCG+TGG | 0.686863 | 7_4:-45353871 | None:intergenic |
| TAACATTATCACTAGCATAG+CGG | 0.731455 | 7_4:-45356157 | None:intergenic |
| CACCAGTAGCTACTACCGTG+GGG | 0.776894 | 7_4:+45355961 | Msa1156820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATTAAGATTTTACAAT+TGG | + | chr7_4:45354440-45354459 | Msa1156820:intron | 10.0% |
| !!! | AAAATTAAGATTTTACAATT+GGG | + | chr7_4:45354441-45354460 | Msa1156820:intron | 10.0% |
| !! | ATTCAATTATTTATAAACAA+TGG | + | chr7_4:45355111-45355130 | Msa1156820:intron | 10.0% |
| !! | AATAAAAAATAAAAATGCAA+GGG | - | chr7_4:45356270-45356289 | None:intergenic | 10.0% |
| !! | AAATAAAAAATAAAAATGCA+AGG | - | chr7_4:45356271-45356290 | None:intergenic | 10.0% |
| !! | AAACATAAAAAAAACGTAAA+AGG | - | chr7_4:45354101-45354120 | None:intergenic | 15.0% |
| !! | AGGAAAAAAAAAACAATTTA+GGG | - | chr7_4:45354199-45354218 | None:intergenic | 15.0% |
| !! | AACATATATAATTCAATCTA+GGG | - | chr7_4:45354232-45354251 | None:intergenic | 15.0% |
| !! | TAACATATATAATTCAATCT+AGG | - | chr7_4:45354233-45354252 | None:intergenic | 15.0% |
| !! | TTGAATTATATATGTTAATC+AGG | + | chr7_4:45354236-45354255 | Msa1156820:intron | 15.0% |
| !! | ATGAGATAATAAATAGTTTA+GGG | - | chr7_4:45354940-45354959 | None:intergenic | 15.0% |
| !! | AATGAGATAATAAATAGTTT+AGG | - | chr7_4:45354941-45354960 | None:intergenic | 15.0% |
| !!! | ATTAATTATTGTTTTGTCTT+GGG | - | chr7_4:45354990-45355009 | None:intergenic | 15.0% |
| !! | AACAATAATTAATGTTGTAT+TGG | + | chr7_4:45354997-45355016 | Msa1156820:intron | 15.0% |
| !!! | AACTTTTTTTTTAATCTTGT+TGG | + | chr7_4:45355791-45355810 | Msa1156820:intron | 15.0% |
| !! | ATAAAAAATAAAAATGCAAG+GGG | - | chr7_4:45356269-45356288 | None:intergenic | 15.0% |
| !! | AGAAAAACATAATATAGATA+AGG | - | chr7_4:45356381-45356400 | None:intergenic | 15.0% |
| !!! | ATATTATGTTTTTCTTTAAC+AGG | + | chr7_4:45356386-45356405 | Msa1156820:intron | 15.0% |
| !! | ATTACTTTAATTAAAAGACT+TGG | + | chr7_4:45357107-45357126 | Msa1156820:intron | 15.0% |
| !! | TTATTATATGACTAAAATAG+TGG | + | chr7_4:45357443-45357462 | Msa1156820:three_prime_UTR | 15.0% |
| !! | ATTAAGTATATTCAAAGAAT+GGG | - | chr7_4:45357515-45357534 | None:intergenic | 15.0% |
| !! | AGAAAATAAAAAACGAATCA+AGG | - | chr7_4:45354067-45354086 | None:intergenic | 20.0% |
| !!! | TTTTTATGTTTTCTCTCAAA+AGG | + | chr7_4:45354110-45354129 | Msa1156820:intron | 20.0% |
| !!! | TTTTATGTTTTCTCTCAAAA+GGG | + | chr7_4:45354111-45354130 | Msa1156820:intron | 20.0% |
| !!! | TTAATTTGGTTTATATAAGC+TGG | + | chr7_4:45354140-45354159 | Msa1156820:intron | 20.0% |
| !!! | TAATTTGGTTTATATAAGCT+GGG | + | chr7_4:45354141-45354160 | Msa1156820:intron | 20.0% |
| !! | CAGGAAAAAAAAAACAATTT+AGG | - | chr7_4:45354200-45354219 | None:intergenic | 20.0% |
| !! | ACAACATTAAACTATAGTAT+CGG | - | chr7_4:45354716-45354735 | None:intergenic | 20.0% |
| !! | TACTATAGTTTAATGTTGTA+TGG | + | chr7_4:45354717-45354736 | Msa1156820:intron | 20.0% |
| !!! | TTAATTATTGTTTTGTCTTG+GGG | - | chr7_4:45354989-45355008 | None:intergenic | 20.0% |
| !!! | CATTAATTATTGTTTTGTCT+TGG | - | chr7_4:45354991-45355010 | None:intergenic | 20.0% |
| !! | TTTGAAAACAACAAGTTAAT+AGG | + | chr7_4:45355022-45355041 | Msa1156820:intron | 20.0% |
| !!! | TTAAAAAGAAGTATGTGTTT+TGG | + | chr7_4:45355369-45355388 | Msa1156820:intron | 20.0% |
| !!! | TTAAACAAATTTTACCTTGA+AGG | + | chr7_4:45356894-45356913 | Msa1156820:intron | 20.0% |
| !!! | TAATTAAAAGACTTGGTTTT+AGG | + | chr7_4:45357114-45357133 | Msa1156820:intron | 20.0% |
| !! | GAAAAGTTGTTTACTTTAAA+AGG | + | chr7_4:45357172-45357191 | Msa1156820:intron | 20.0% |
| !! | ATATTCTGATCTATTTCATT+TGG | + | chr7_4:45357384-45357403 | Msa1156820:three_prime_UTR | 20.0% |
| !! | CATTAAGTATATTCAAAGAA+TGG | - | chr7_4:45357516-45357535 | None:intergenic | 20.0% |
| !! | CATTCTTTGAATATACTTAA+TGG | + | chr7_4:45357514-45357533 | Msa1156820:three_prime_UTR | 20.0% |
| !! | TTTGAATATACTTAATGGTA+TGG | + | chr7_4:45357519-45357538 | Msa1156820:three_prime_UTR | 20.0% |
| !!! | TGAGATGATTTGATTTGTAT+GGG | - | chr7_4:45353817-45353836 | None:intergenic | 25.0% |
| !!! | TTGAGATGATTTGATTTGTA+TGG | - | chr7_4:45353818-45353837 | None:intergenic | 25.0% |
| ! | CATCTCTTATAAATCAACAA+GGG | - | chr7_4:45354347-45354366 | None:intergenic | 25.0% |
| ! | ACATCTCTTATAAATCAACA+AGG | - | chr7_4:45354348-45354367 | None:intergenic | 25.0% |
| ! | TGATTTCATGTTGATATATG+TGG | + | chr7_4:45354473-45354492 | Msa1156820:intron | 25.0% |
| !! | TGTTGTATGGTTTTCATTTT+CGG | + | chr7_4:45354730-45354749 | Msa1156820:intron | 25.0% |
| ! | AATTAACTCAAGTGGAAATA+AGG | - | chr7_4:45354760-45354779 | None:intergenic | 25.0% |
| ! | GATAAAACAATTAACTCAAG+TGG | - | chr7_4:45354768-45354787 | None:intergenic | 25.0% |
| ! | ACAACAATAACTAAAAGGAA+CGG | - | chr7_4:45354851-45354870 | None:intergenic | 25.0% |
| !!! | TTCCTTTTAGTTATTGTTGT+AGG | + | chr7_4:45354851-45354870 | Msa1156820:intron | 25.0% |
| !!! | TCCTTTTAGTTATTGTTGTA+GGG | + | chr7_4:45354852-45354871 | Msa1156820:intron | 25.0% |
| ! | ATTTATTATCTCATTCCACA+TGG | + | chr7_4:45354946-45354965 | Msa1156820:intron | 25.0% |
| !!! | TAATTATTGTTTTGTCTTGG+GGG | - | chr7_4:45354988-45355007 | None:intergenic | 25.0% |
| ! | AAGTGACTAGTAAAAATGAA+CGG | + | chr7_4:45355063-45355082 | Msa1156820:intron | 25.0% |
| ! | AATAAATCAATAGTTGTGCT+TGG | + | chr7_4:45355178-45355197 | Msa1156820:intron | 25.0% |
| ! | CTTTACTTTGAACTAGAAAA+TGG | + | chr7_4:45355278-45355297 | Msa1156820:intron | 25.0% |
| ! | ACAATCATATACATACGATT+TGG | - | chr7_4:45355718-45355737 | None:intergenic | 25.0% |
| ! | TAAGTTTACAACTCAAAAGA+AGG | + | chr7_4:45356594-45356613 | Msa1156820:intron | 25.0% |
| ! | TAAGTCATTCATATTAAGCA+TGG | - | chr7_4:45356744-45356763 | None:intergenic | 25.0% |
| ! | CAAAAAAATACCATGTAGTT+TGG | + | chr7_4:45356792-45356811 | Msa1156820:intron | 25.0% |
| !! | ATGATTTTCGGTAAATTCTT+AGG | - | chr7_4:45356948-45356967 | None:intergenic | 25.0% |
| ! | TTTAGGCTTAGATATACATT+TGG | + | chr7_4:45357131-45357150 | Msa1156820:intron | 25.0% |
| !!! | GTTTTTTCTTGAATGTAGAA+TGG | + | chr7_4:45357265-45357284 | Msa1156820:intron | 25.0% |
| ! | AAATAGATCAGAATATCTTG+TGG | - | chr7_4:45357380-45357399 | None:intergenic | 25.0% |
| CATGAAAACTCAAAAACACA+AGG | - | chr7_4:45354275-45354294 | None:intergenic | 30.0% | |
| TTCATGTTGATATATGTGGA+TGG | + | chr7_4:45354477-45354496 | Msa1156820:intron | 30.0% | |
| ! | CTGTTTAAGCTTCTTTTGAT+TGG | + | chr7_4:45354581-45354600 | Msa1156820:CDS | 30.0% |
| !! | CTGCTTGTTGTTTATTATGT+TGG | + | chr7_4:45354668-45354687 | Msa1156820:intron | 30.0% |
| TTATGTTGGATACTCTTGTT+TGG | + | chr7_4:45354682-45354701 | Msa1156820:intron | 30.0% | |
| ACCCTACAACAATAACTAAA+AGG | - | chr7_4:45354856-45354875 | None:intergenic | 30.0% | |
| !! | AATTATTGTTTTGTCTTGGG+GGG | - | chr7_4:45354987-45355006 | None:intergenic | 30.0% |
| AAATGAACGGATGTAGTAAT+TGG | + | chr7_4:45355076-45355095 | Msa1156820:intron | 30.0% | |
| CTACCTGTTTAATTCTTTGT+TGG | + | chr7_4:45355134-45355153 | Msa1156820:intron | 30.0% | |
| TTCAAAGTAAAGCTCAAAAC+AGG | - | chr7_4:45355270-45355289 | None:intergenic | 30.0% | |
| TTAATCAGACATTCTCCATA+AGG | - | chr7_4:45355304-45355323 | None:intergenic | 30.0% | |
| TGATAGTTACCAACCTAAAA+AGG | + | chr7_4:45355420-45355439 | Msa1156820:intron | 30.0% | |
| GATAGTTACCAACCTAAAAA+GGG | + | chr7_4:45355421-45355440 | Msa1156820:intron | 30.0% | |
| !! | AACGTTAAGTTTTATGCTAC+AGG | + | chr7_4:45355521-45355540 | Msa1156820:intron | 30.0% |
| ACTTACAAAATCAACTCCAA+TGG | - | chr7_4:45355577-45355596 | None:intergenic | 30.0% | |
| TGATCCAATTTCATATGTAG+TGG | + | chr7_4:45355906-45355925 | Msa1156820:intron | 30.0% | |
| GATCCAATTTCATATGTAGT+GGG | + | chr7_4:45355907-45355926 | Msa1156820:intron | 30.0% | |
| TATCCCACTACATATGAAAT+TGG | - | chr7_4:45355913-45355932 | None:intergenic | 30.0% | |
| TTTATATTTCCCGACTTTGT+TGG | + | chr7_4:45356030-45356049 | Msa1156820:intron | 30.0% | |
| GCTTTACTAATTGGTTATTC+TGG | + | chr7_4:45356066-45356085 | Msa1156820:intron | 30.0% | |
| TAACATTATCACTAGCATAG+CGG | - | chr7_4:45356160-45356179 | None:intergenic | 30.0% | |
| ! | TGATAATGTTAACAAGCTCT+TGG | + | chr7_4:45356169-45356188 | Msa1156820:CDS | 30.0% |
| TAGATAAGGATAGCTGAAAT+AGG | - | chr7_4:45356367-45356386 | None:intergenic | 30.0% | |
| ! | TGAAATAGGCATACCTTTTA+TGG | + | chr7_4:45356419-45356438 | Msa1156820:CDS | 30.0% |
| AAATGACTCTAAGCTAAAGA+AGG | - | chr7_4:45356642-45356661 | None:intergenic | 30.0% | |
| !!! | TTATGCCTTTTAGTTTTCCT+TGG | + | chr7_4:45356662-45356681 | Msa1156820:intron | 30.0% |
| AAAATACCATGTAGTTTGGT+TGG | + | chr7_4:45356796-45356815 | Msa1156820:intron | 30.0% | |
| AAATACCATGTAGTTTGGTT+GGG | + | chr7_4:45356797-45356816 | Msa1156820:intron | 30.0% | |
| ATAAAATGACAGTCCTTTCA+AGG | - | chr7_4:45357083-45357102 | None:intergenic | 30.0% | |
| ! | ACAACTTTTCATTGAACATC+AGG | - | chr7_4:45357162-45357181 | None:intergenic | 30.0% |
| CATCAGAATTTGATCTTAGA+GGG | - | chr7_4:45357242-45357261 | None:intergenic | 30.0% | |
| TCATCAGAATTTGATCTTAG+AGG | - | chr7_4:45357243-45357262 | None:intergenic | 30.0% | |
| !!! | TCGTTGCTTGTAAGATTTTT+TGG | + | chr7_4:45357415-45357434 | Msa1156820:three_prime_UTR | 30.0% |
| !! | GATGATTTGATTTGTATGGG+TGG | - | chr7_4:45353814-45353833 | None:intergenic | 35.0% |
| GTGGAAAAGGGGATTAAATA+CGG | - | chr7_4:45353855-45353874 | None:intergenic | 35.0% | |
| TCATGTCTGAAAGAGTGAAA+GGG | - | chr7_4:45354000-45354019 | None:intergenic | 35.0% | |
| TTCATGTCTGAAAGAGTGAA+AGG | - | chr7_4:45354001-45354020 | None:intergenic | 35.0% | |
| AAGTGAGGAACATACTATTC+AGG | - | chr7_4:45354025-45354044 | None:intergenic | 35.0% | |
| ! | ATGTTTTCTCTCAAAAGGGT+TGG | + | chr7_4:45354115-45354134 | Msa1156820:intron | 35.0% |
| !! | CAAAAGGGTTGGTGTTAATT+TGG | + | chr7_4:45354126-45354145 | Msa1156820:intron | 35.0% |
| ! | CAATCTAGGGTTAGAATTTC+AGG | - | chr7_4:45354219-45354238 | None:intergenic | 35.0% |
| CACTAACAAGATCAGATTCA+GGG | - | chr7_4:45354322-45354341 | None:intergenic | 35.0% | |
| TCACTAACAAGATCAGATTC+AGG | - | chr7_4:45354323-45354342 | None:intergenic | 35.0% | |
| ! | AAGGCTTCTAATTGTTGCTT+CGG | - | chr7_4:45354794-45354813 | None:intergenic | 35.0% |
| AAGCAACAATTAGAAGCCTT+TGG | + | chr7_4:45354794-45354813 | Msa1156820:intron | 35.0% | |
| AGCAACAATTAGAAGCCTTT+GGG | + | chr7_4:45354795-45354814 | Msa1156820:intron | 35.0% | |
| CAATAACTAAAAGGAACGGA+TGG | - | chr7_4:45354847-45354866 | None:intergenic | 35.0% | |
| CCTCCAACAAAGAATTAAAC+AGG | - | chr7_4:45355140-45355159 | None:intergenic | 35.0% | |
| CCTGTTTAATTCTTTGTTGG+AGG | + | chr7_4:45355137-45355156 | Msa1156820:intron | 35.0% | |
| ACTTTCAACAATATCCCGAA+AGG | - | chr7_4:45355232-45355251 | None:intergenic | 35.0% | |
| GGATATTGTTGAAAGTGATG+AGG | + | chr7_4:45355236-45355255 | Msa1156820:intron | 35.0% | |
| ! | TGAACTAGAAAATGGCCTTA+TGG | + | chr7_4:45355286-45355305 | Msa1156820:intron | 35.0% |
| !!! | AAAGAAGTATGTGTTTTGGC+TGG | + | chr7_4:45355373-45355392 | Msa1156820:intron | 35.0% |
| !!! | CCATTTTACCCTTTTTAGGT+TGG | - | chr7_4:45355432-45355451 | None:intergenic | 35.0% |
| CCAACCTAAAAAGGGTAAAA+TGG | + | chr7_4:45355429-45355448 | Msa1156820:intron | 35.0% | |
| !! | GAAGCCATTTTACCCTTTTT+AGG | - | chr7_4:45355436-45355455 | None:intergenic | 35.0% |
| AATGGCTTCACTTTGTATGT+TGG | + | chr7_4:45355447-45355466 | Msa1156820:intron | 35.0% | |
| ! | CTTTGTATGTTGGTTGATCT+TGG | + | chr7_4:45355457-45355476 | Msa1156820:intron | 35.0% |
| ! | ACATACGATTTGGAGCTTAA+TGG | - | chr7_4:45355708-45355727 | None:intergenic | 35.0% |
| GATAAGAAACAATGTCAACG+TGG | - | chr7_4:45355878-45355897 | None:intergenic | 35.0% | |
| TCCTTGCATGCTTTACTAAT+TGG | + | chr7_4:45356057-45356076 | Msa1156820:intron | 35.0% | |
| ACCAATTAGTAAAGCATGCA+AGG | - | chr7_4:45356061-45356080 | None:intergenic | 35.0% | |
| GCTTCAATAATGTGAAGCAA+TGG | + | chr7_4:45356120-45356139 | Msa1156820:CDS | 35.0% | |
| AATGTTAACAAGCTCTTGGT+TGG | + | chr7_4:45356173-45356192 | Msa1156820:CDS | 35.0% | |
| TTTGCACTTGTCTCCATAAA+AGG | - | chr7_4:45356435-45356454 | None:intergenic | 35.0% | |
| ! | TTTTATGGAGACAAGTGCAA+AGG | + | chr7_4:45356434-45356453 | Msa1156820:CDS | 35.0% |
| AAATGTCGAACAGGCATTTA+TGG | + | chr7_4:45356464-45356483 | Msa1156820:CDS | 35.0% | |
| ATATGAGTACCTATCCTTGA+TGG | - | chr7_4:45356502-45356521 | None:intergenic | 35.0% | |
| !! | TTTGCTCTAACTTGCTTAGA+AGG | - | chr7_4:45356572-45356591 | None:intergenic | 35.0% |
| AAGCTAAAGAAGGTTGGAAT+GGG | - | chr7_4:45356632-45356651 | None:intergenic | 35.0% | |
| TAAGCTAAAGAAGGTTGGAA+TGG | - | chr7_4:45356633-45356652 | None:intergenic | 35.0% | |
| TGGTCTAGATTTGATTGGAT+GGG | - | chr7_4:45356724-45356743 | None:intergenic | 35.0% | |
| ATGGTCTAGATTTGATTGGA+TGG | - | chr7_4:45356725-45356744 | None:intergenic | 35.0% | |
| AAGCATGGTCTAGATTTGAT+TGG | - | chr7_4:45356729-45356748 | None:intergenic | 35.0% | |
| !!! | GGTATTTTTTTGCCTCACTT+AGG | - | chr7_4:45356784-45356803 | None:intergenic | 35.0% |
| ! | ATGACACGACATTGATTGAT+TGG | - | chr7_4:45356837-45356856 | None:intergenic | 35.0% |
| TACCGAAAATCATAGTCACA+TGG | + | chr7_4:45356955-45356974 | Msa1156820:intron | 35.0% | |
| GGTTTCCAAAATGATTTCCT+CGG | - | chr7_4:45356988-45357007 | None:intergenic | 35.0% | |
| !!! | GCAACGAGATTTTGGAATTT+TGG | - | chr7_4:45357009-45357028 | None:intergenic | 35.0% |
| AGGGTAATCATTACCTTGAA+AGG | + | chr7_4:45357067-45357086 | Msa1156820:intron | 35.0% | |
| GACCAATGTAAGAATTTGTC+TGG | + | chr7_4:45357465-45357484 | Msa1156820:three_prime_UTR | 35.0% | |
| CACCAGACAAATTCTTACAT+TGG | - | chr7_4:45357470-45357489 | None:intergenic | 35.0% | |
| CAATGTAAGAATTTGTCTGG+TGG | + | chr7_4:45357468-45357487 | Msa1156820:three_prime_UTR | 35.0% | |
| TAAGAATTTGTCTGGTGGTT+TGG | + | chr7_4:45357473-45357492 | Msa1156820:three_prime_UTR | 35.0% | |
| TTCAAAGAATGGGATCATCT+AGG | - | chr7_4:45357505-45357524 | None:intergenic | 35.0% | |
| TTGATATGATGAGAAACGCG+TGG | - | chr7_4:45353874-45353893 | None:intergenic | 40.0% | |
| AATCAGAAGGAATCGGTTGT+TGG | - | chr7_4:45353906-45353925 | None:intergenic | 40.0% | |
| CTCGAGAAATCAGAAGGAAT+CGG | - | chr7_4:45353913-45353932 | None:intergenic | 40.0% | |
| GTTAACCTCGAGAAATCAGA+AGG | - | chr7_4:45353919-45353938 | None:intergenic | 40.0% | |
| TGAAAGAGTGAAAGGGTGAT+CGG | - | chr7_4:45353993-45354012 | None:intergenic | 40.0% | |
| TCGAGAAGGAATAGAAAGTG+AGG | - | chr7_4:45354040-45354059 | None:intergenic | 40.0% | |
| CGAATCAAGGAAAATCGAGA+AGG | - | chr7_4:45354054-45354073 | None:intergenic | 40.0% | |
| !! | CTTCTTTTGATTGGAGACTC+TGG | + | chr7_4:45354590-45354609 | Msa1156820:CDS | 40.0% |
| TTACAGCAAATCTGAGCAGA+AGG | - | chr7_4:45354631-45354650 | None:intergenic | 40.0% | |
| AGAGAGAGAGAAATACCATG+TGG | - | chr7_4:45354964-45354983 | None:intergenic | 40.0% | |
| ! | TGGAGGTTTTTGTGTAGTTC+TGG | + | chr7_4:45355154-45355173 | Msa1156820:intron | 40.0% |
| GTTGTGCTTGGAACTTTATG+AGG | + | chr7_4:45355190-45355209 | Msa1156820:intron | 40.0% | |
| TGCTTGGAACTTTATGAGGT+TGG | + | chr7_4:45355194-45355213 | Msa1156820:intron | 40.0% | |
| GCTTGGAACTTTATGAGGTT+GGG | + | chr7_4:45355195-45355214 | Msa1156820:intron | 40.0% | |
| CTTGGAACTTTATGAGGTTG+GGG | + | chr7_4:45355196-45355215 | Msa1156820:intron | 40.0% | |
| TTGGAACTTTATGAGGTTGG+GGG | + | chr7_4:45355197-45355216 | Msa1156820:intron | 40.0% | |
| ! | TGTTGGTTGATCTTGGTTCA+TGG | + | chr7_4:45355464-45355483 | Msa1156820:intron | 40.0% |
| TGGTTCATGGAGATGATATG+TGG | + | chr7_4:45355477-45355496 | Msa1156820:intron | 40.0% | |
| ! | ATATGTAGTGGGATACAGCT+GGG | + | chr7_4:45355918-45355937 | Msa1156820:intron | 40.0% |
| GGAATCATTGTGCGTAATGA+TGG | + | chr7_4:45355989-45356008 | Msa1156820:intron | 40.0% | |
| AAGGAAAGACCAACAAAGTC+GGG | - | chr7_4:45356042-45356061 | None:intergenic | 40.0% | |
| CAAGGAAAGACCAACAAAGT+CGG | - | chr7_4:45356043-45356062 | None:intergenic | 40.0% | |
| CAGGCATTTGCAGATGAAAT+AGG | + | chr7_4:45356405-45356424 | Msa1156820:intron | 40.0% | |
| GGATTCTACAAATGTCGAAC+AGG | + | chr7_4:45356455-45356474 | Msa1156820:CDS | 40.0% | |
| GACTCTAAGCTAAAGAAGGT+TGG | - | chr7_4:45356638-45356657 | None:intergenic | 40.0% | |
| !!! | CCTTTTAGTTTTCCTTGGCT+GGG | + | chr7_4:45356667-45356686 | Msa1156820:intron | 40.0% |
| ! | AAATTGACTTATCCCAGCCA+AGG | - | chr7_4:45356682-45356701 | None:intergenic | 40.0% |
| ! | GCTGGGATAAGTCAATTTTG+AGG | + | chr7_4:45356684-45356703 | Msa1156820:intron | 40.0% |
| AATGACTTAGAGCCATACAG+AGG | + | chr7_4:45356755-45356774 | Msa1156820:intron | 40.0% | |
| TCACTTAGGTATCCTCTGTA+TGG | - | chr7_4:45356770-45356789 | None:intergenic | 40.0% | |
| ATACAGAGGATACCTAAGTG+AGG | + | chr7_4:45356769-45356788 | Msa1156820:intron | 40.0% | |
| ACATACCCAACCAAACTACA+TGG | - | chr7_4:45356805-45356824 | None:intergenic | 40.0% | |
| ! | ACATTGATTGATTGGACGAG+GGG | - | chr7_4:45356829-45356848 | None:intergenic | 40.0% |
| ! | GACATTGATTGATTGGACGA+GGG | - | chr7_4:45356830-45356849 | None:intergenic | 40.0% |
| ! | GGCCATGTGACTATGATTTT+CGG | - | chr7_4:45356960-45356979 | None:intergenic | 40.0% |
| TCCAAAATGATTTCCTCGGT+CGG | - | chr7_4:45356984-45357003 | None:intergenic | 40.0% | |
| ! | AAGAATGGGCAACGAGATTT+TGG | - | chr7_4:45357017-45357036 | None:intergenic | 40.0% |
| GCAGCAGATCAAGAAAGAAT+GGG | - | chr7_4:45357031-45357050 | None:intergenic | 40.0% | |
| TGCAGCAGATCAAGAAAGAA+TGG | - | chr7_4:45357032-45357051 | None:intergenic | 40.0% | |
| ! | CACTAACTTCTTTTCGTTGC+TGG | + | chr7_4:45357208-45357227 | Msa1156820:intron | 40.0% |
| ATGAGAAACGCGTGGAAAAG+GGG | - | chr7_4:45353866-45353885 | None:intergenic | 45.0% | |
| GATGAGAAACGCGTGGAAAA+GGG | - | chr7_4:45353867-45353886 | None:intergenic | 45.0% | |
| TGATGAGAAACGCGTGGAAA+AGG | - | chr7_4:45353868-45353887 | None:intergenic | 45.0% | |
| CGATTCCTTCTGATTTCTCG+AGG | + | chr7_4:45353911-45353930 | Msa1156820:five_prime_UTR | 45.0% | |
| GTGATAGAGCTGATGTGTTG+TGG | + | chr7_4:45354538-45354557 | Msa1156820:intron | 45.0% | |
| TTGATTGGAGACTCTGGTGT+TGG | + | chr7_4:45354596-45354615 | Msa1156820:CDS | 45.0% | |
| TGGAACTTTATGAGGTTGGG+GGG | + | chr7_4:45355198-45355217 | Msa1156820:intron | 45.0% | |
| TGGGGGGAGATAAAACCTTT+CGG | + | chr7_4:45355214-45355233 | Msa1156820:intron | 45.0% | |
| GACAGCTACATAAGCACCAT+TGG | + | chr7_4:45355558-45355577 | Msa1156820:CDS | 45.0% | |
| GAAAATCCGCACAGTTGAAC+AGG | + | chr7_4:45355673-45355692 | Msa1156820:intron | 45.0% | |
| ! | CATATGTAGTGGGATACAGC+TGG | + | chr7_4:45355917-45355936 | Msa1156820:intron | 45.0% |
| CGAACAGGCATTTATGGCAA+TGG | + | chr7_4:45356470-45356489 | Msa1156820:CDS | 45.0% | |
| TGGCTTCTTCCATCAAGGAT+AGG | + | chr7_4:45356490-45356509 | Msa1156820:CDS | 45.0% | |
| !!! | GCCTTTTAGTTTTCCTTGGC+TGG | + | chr7_4:45356666-45356685 | Msa1156820:intron | 45.0% |
| CCCAGCCAAGGAAAACTAAA+AGG | - | chr7_4:45356670-45356689 | None:intergenic | 45.0% | |
| ! | CGACATTGATTGATTGGACG+AGG | - | chr7_4:45356831-45356850 | None:intergenic | 45.0% |
| GTTGGGTATCAGTACCTTCA+AGG | - | chr7_4:45356911-45356930 | None:intergenic | 45.0% | |
| TGATACCCAACCAAACTCCA+CGG | + | chr7_4:45356920-45356939 | Msa1156820:intron | 45.0% | |
| ! | TTCTTAGGTACCGTGGAGTT+TGG | - | chr7_4:45356933-45356952 | None:intergenic | 45.0% |
| ! | CGGTAAATTCTTAGGTACCG+TGG | - | chr7_4:45356940-45356959 | None:intergenic | 45.0% |
| AAAATGATTTCCTCGGTCGG+TGG | - | chr7_4:45356981-45357000 | None:intergenic | 45.0% | |
| ! | ACCGACCGAGGAAATCATTT+TGG | + | chr7_4:45356980-45356999 | Msa1156820:intron | 45.0% |
| CAAGGTAATGATTACCCTGC+TGG | - | chr7_4:45357065-45357084 | None:intergenic | 45.0% | |
| GCCAACCTACAAACAATGCA+AGG | + | chr7_4:45357291-45357310 | Msa1156820:CDS | 45.0% | |
| GCCTTGCATTGTTTGTAGGT+TGG | - | chr7_4:45357295-45357314 | None:intergenic | 45.0% | |
| AACCAGTGCAACACACCCAA+AGG | - | chr7_4:45354813-45354832 | None:intergenic | 50.0% | |
| GGGGGGAGATAAAACCTTTC+GGG | + | chr7_4:45355215-45355234 | Msa1156820:intron | 50.0% | |
| ATCCGCACAGTTGAACAGGA+TGG | + | chr7_4:45355677-45355696 | Msa1156820:CDS | 50.0% | |
| TCCGCACAGTTGAACAGGAT+GGG | + | chr7_4:45355678-45355697 | Msa1156820:CDS | 50.0% | |
| TCCCATCCTGTTCAACTGTG+CGG | - | chr7_4:45355682-45355701 | None:intergenic | 50.0% | |
| CAGCTGGGCAAGAACGATTT+AGG | + | chr7_4:45355933-45355952 | Msa1156820:CDS | 50.0% | |
| ATCACCAGTAGCTACTACCG+TGG | + | chr7_4:45355959-45355978 | Msa1156820:CDS | 50.0% | |
| TCACCAGTAGCTACTACCGT+GGG | + | chr7_4:45355960-45355979 | Msa1156820:CDS | 50.0% | |
| CAATGATTCCATGTGCCCCA+CGG | - | chr7_4:45355979-45355998 | None:intergenic | 50.0% | |
| ! | GTGCTTGCATAGTGCTGTTG+AGG | + | chr7_4:45356323-45356342 | Msa1156820:intron | 50.0% |
| GGCAATGGCTTCTTCCATCA+AGG | + | chr7_4:45356485-45356504 | Msa1156820:CDS | 50.0% | |
| ! | AGGTACCGTGGAGTTTGGTT+GGG | - | chr7_4:45356928-45356947 | None:intergenic | 50.0% |
| ! | TAGGTACCGTGGAGTTTGGT+TGG | - | chr7_4:45356929-45356948 | None:intergenic | 50.0% |
| GGAGGCCTTGCATTGTTTGT+AGG | - | chr7_4:45357299-45357318 | None:intergenic | 50.0% | |
| GCCTCCAACAGTGCAGATAA+GGG | + | chr7_4:45357313-45357332 | Msa1156820:CDS | 50.0% | |
| CCTCCAACAGTGCAGATAAG+GGG | + | chr7_4:45357314-45357333 | Msa1156820:CDS | 50.0% | |
| TGTCCCCTTATCTGCACTGT+TGG | - | chr7_4:45357320-45357339 | None:intergenic | 50.0% | |
| AGCCAGTTGGCCAGAAAAGT+GGG | + | chr7_4:45357339-45357358 | Msa1156820:CDS | 50.0% | |
| !! | ATGAGCAGCACCCACTTTTC+TGG | - | chr7_4:45357352-45357371 | None:intergenic | 50.0% |
| GAGATTGGTGCAGTAGCGGT+GGG | - | chr7_4:45353941-45353960 | None:intergenic | 55.0% | |
| GTCGGAGATTGGTGCAGTAG+CGG | - | chr7_4:45353945-45353964 | None:intergenic | 55.0% | |
| AGGGAGAGTTCGTCGGAGAT+TGG | - | chr7_4:45353956-45353975 | None:intergenic | 55.0% | |
| AGCCTTTGGGTGTGTTGCAC+TGG | + | chr7_4:45354808-45354827 | Msa1156820:intron | 55.0% | |
| CACCAGTAGCTACTACCGTG+GGG | + | chr7_4:45355961-45355980 | Msa1156820:CDS | 55.0% | |
| GGCCTCCAACAGTGCAGATA+AGG | + | chr7_4:45357312-45357331 | Msa1156820:CDS | 55.0% | |
| CCCCTTATCTGCACTGTTGG+AGG | - | chr7_4:45357317-45357336 | None:intergenic | 55.0% | |
| CAGATAAGGGGACAGCCAGT+TGG | + | chr7_4:45357326-45357345 | Msa1156820:CDS | 55.0% | |
| CAGCCAGTTGGCCAGAAAAG+TGG | + | chr7_4:45357338-45357357 | Msa1156820:CDS | 55.0% | |
| !! | CACCCACTTTTCTGGCCAAC+TGG | - | chr7_4:45357344-45357363 | None:intergenic | 55.0% |
| GGAGATTGGTGCAGTAGCGG+TGG | - | chr7_4:45353942-45353961 | None:intergenic | 60.0% | |
| TCTCCGACGAACTCTCCCTC+CGG | + | chr7_4:45353957-45353976 | Msa1156820:five_prime_UTR | 60.0% | |
| TTGCCGGAGGGAGAGTTCGT+CGG | - | chr7_4:45353963-45353982 | None:intergenic | 60.0% | |
| ATCGGCGAGTTGTTGCCGGA+GGG | - | chr7_4:45353975-45353994 | None:intergenic | 60.0% | |
| GGTGATCGGCGAGTTGTTGC+CGG | - | chr7_4:45353979-45353998 | None:intergenic | 60.0% | |
| TGCCCCACGGTAGTAGCTAC+TGG | - | chr7_4:45355966-45355985 | None:intergenic | 60.0% | |
| AGCTACTACCGTGGGGCACA+TGG | + | chr7_4:45355968-45355987 | Msa1156820:CDS | 60.0% | |
| TGCACAGCTCGCAACCAGCA+GGG | + | chr7_4:45357048-45357067 | Msa1156820:intron | 60.0% | |
| GATCGGCGAGTTGTTGCCGG+AGG | - | chr7_4:45353976-45353995 | None:intergenic | 65.0% | |
| AGTCACATGGCCACCGACCG+AGG | + | chr7_4:45356968-45356987 | Msa1156820:intron | 65.0% | |
| CTGCACAGCTCGCAACCAGC+AGG | + | chr7_4:45357047-45357066 | Msa1156820:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 45353807 | 45357597 | 45353807 | ID=Msa1156820;Name=Msa1156820 |
| chr7_4 | mRNA | 45353807 | 45357597 | 45353807 | ID=Msa1156820-mRNA-1;Parent=Msa1156820;Name=Msa1156820-mRNA-1;_AED=0.11;_eAED=0.11;_QI=209|1|1|1|0.85|0.87|8|221|202 |
| chr7_4 | exon | 45353807 | 45354029 | 45353807 | ID=Msa1156820-mRNA-1:exon:11783;Parent=Msa1156820-mRNA-1 |
| chr7_4 | exon | 45354574 | 45354646 | 45354574 | ID=Msa1156820-mRNA-1:exon:11784;Parent=Msa1156820-mRNA-1 |
| chr7_4 | exon | 45355543 | 45355590 | 45355543 | ID=Msa1156820-mRNA-1:exon:11785;Parent=Msa1156820-mRNA-1 |
| chr7_4 | exon | 45355674 | 45355721 | 45355674 | ID=Msa1156820-mRNA-1:exon:11786;Parent=Msa1156820-mRNA-1 |
| chr7_4 | exon | 45355926 | 45355997 | 45355926 | ID=Msa1156820-mRNA-1:exon:11787;Parent=Msa1156820-mRNA-1 |
| chr7_4 | exon | 45356092 | 45356247 | 45356092 | ID=Msa1156820-mRNA-1:exon:11788;Parent=Msa1156820-mRNA-1 |
| chr7_4 | exon | 45356408 | 45356511 | 45356408 | ID=Msa1156820-mRNA-1:exon:11789;Parent=Msa1156820-mRNA-1 |
| chr7_4 | exon | 45357283 | 45357597 | 45357283 | ID=Msa1156820-mRNA-1:exon:11790;Parent=Msa1156820-mRNA-1 |
| chr7_4 | five_prime_UTR | 45353807 | 45354015 | 45353807 | ID=Msa1156820-mRNA-1:five_prime_utr;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45354016 | 45354029 | 45354016 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45354574 | 45354646 | 45354574 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45355543 | 45355590 | 45355543 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45355674 | 45355721 | 45355674 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45355926 | 45355997 | 45355926 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45356092 | 45356247 | 45356092 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45356408 | 45356511 | 45356408 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | CDS | 45357283 | 45357376 | 45357283 | ID=Msa1156820-mRNA-1:cds;Parent=Msa1156820-mRNA-1 |
| chr7_4 | three_prime_UTR | 45357377 | 45357597 | 45357377 | ID=Msa1156820-mRNA-1:three_prime_utr;Parent=Msa1156820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
