Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080020 | sp|Q0WPQ2|ETR2_ARATH | 59.335 | 782 | 259 | 15 | 1 | 735 | 1 | 770 | 0.0 | 865 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080020 | A0A072VX71 | 95.652 | 759 | 10 | 1 | 1 | 736 | 1 | 759 | 0.0 | 1481 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0080020 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021400 | Msa0080020 | 0.867617 | 1.199250e-65 | -8.615850e-47 |
| Msa0024950 | Msa0080020 | 0.801714 | 7.905351e-49 | -8.615850e-47 |
| Msa0029700 | Msa0080020 | 0.992888 | 4.458625e-196 | -8.615850e-47 |
| Msa0054860 | Msa0080020 | 0.800271 | 1.558752e-48 | -8.615850e-47 |
| Msa0064960 | Msa0080020 | 0.892238 | 1.908750e-74 | -8.615850e-47 |
| Msa0072440 | Msa0080020 | 0.845860 | 3.120026e-59 | -8.615850e-47 |
| Msa0080020 | Msa0097470 | -0.801717 | 7.891251e-49 | -8.615850e-47 |
| Msa0080020 | Msa0100200 | 0.801608 | 8.307905e-49 | -8.615850e-47 |
| Msa0080020 | Msa0110240 | 0.903313 | 3.947969e-79 | -8.615850e-47 |
| Msa0080020 | Msa0120860 | 0.858325 | 8.902496e-63 | -8.615850e-47 |
| Msa0080020 | Msa0124960 | 0.995200 | 5.878988e-214 | -8.615850e-47 |
| Msa0080020 | Msa0132080 | -0.803487 | 3.405515e-49 | -8.615850e-47 |
| Msa0080020 | Msa0154730 | 0.992859 | 6.821880e-196 | -8.615850e-47 |
| Msa0080020 | Msa0156530 | 0.879190 | 1.525735e-69 | -8.615850e-47 |
| Msa0080020 | Msa0186200 | 0.807455 | 5.012863e-50 | -8.615850e-47 |
| Msa0080020 | Msa0186400 | -0.802879 | 4.548656e-49 | -8.615850e-47 |
| Msa0080020 | Msa0189150 | -0.801719 | 7.886556e-49 | -8.615850e-47 |
| Msa0080020 | Msa0191260 | 0.821400 | 4.120706e-53 | -8.615850e-47 |
| Msa0080020 | Msa0197170 | 0.822608 | 2.162490e-53 | -8.615850e-47 |
| Msa0080020 | Msa0209370 | -0.800152 | 1.648016e-48 | -8.615850e-47 |
| Msa0080020 | Msa0220160 | 0.805544 | 1.268175e-49 | -8.615850e-47 |
| Msa0080020 | Msa0220170 | 0.811901 | 5.551844e-51 | -8.615850e-47 |
| Msa0080020 | Msa0225070 | -0.810785 | 9.696134e-51 | -8.615850e-47 |
| Msa0080020 | Msa0227790 | 0.823399 | 1.414247e-53 | -8.615850e-47 |
| Msa0080020 | Msa0238140 | 0.840688 | 7.477638e-58 | -8.615850e-47 |
| Msa0080020 | Msa0238950 | 0.823240 | 1.541132e-53 | -8.615850e-47 |
| Msa0080020 | Msa0258910 | 0.806272 | 8.916691e-50 | -8.615850e-47 |
| Msa0080020 | Msa0266140 | -0.805204 | 1.494709e-49 | -8.615850e-47 |
| Msa0080020 | Msa0270730 | -0.810462 | 1.139091e-50 | -8.615850e-47 |
| Msa0080020 | Msa0298400 | 0.800345 | 1.505345e-48 | -8.615850e-47 |
| Msa0080020 | Msa0304060 | -0.812264 | 4.626945e-51 | -8.615850e-47 |
| Msa0080020 | Msa0305630 | -0.802898 | 4.509855e-49 | -8.615850e-47 |
| Msa0080020 | Msa0308750 | 0.833361 | 5.574083e-56 | -8.615850e-47 |
| Msa0080020 | Msa0309490 | -0.802638 | 5.101191e-49 | -8.615850e-47 |
| Msa0080020 | Msa0311130 | -0.804617 | 1.982364e-49 | -8.615850e-47 |
| Msa0080020 | Msa0311900 | 0.817040 | 4.052779e-52 | -8.615850e-47 |
| Msa0080020 | Msa0316140 | 0.812652 | 3.806523e-51 | -8.615850e-47 |
| Msa0080020 | Msa0316740 | 0.835269 | 1.851606e-56 | -8.615850e-47 |
| Msa0080020 | Msa0340270 | 0.800914 | 1.152700e-48 | -8.615850e-47 |
| Msa0080020 | Msa0364030 | -0.802550 | 5.320669e-49 | -8.615850e-47 |
| Msa0080020 | Msa0372100 | 0.812833 | 3.474002e-51 | -8.615850e-47 |
| Msa0080020 | Msa0373550 | 0.800874 | 1.174593e-48 | -8.615850e-47 |
| Msa0080020 | Msa0382020 | -0.801457 | 8.923854e-49 | -8.615850e-47 |
| Msa0080020 | Msa0383460 | 0.844182 | 8.856551e-59 | -8.615850e-47 |
| Msa0080020 | Msa0383930 | 0.842448 | 2.569723e-58 | -8.615850e-47 |
| Msa0080020 | Msa0384590 | 0.837352 | 5.468414e-57 | -8.615850e-47 |
| Msa0080020 | Msa0396330 | -0.801983 | 6.959411e-49 | -8.615850e-47 |
| Msa0080020 | Msa0403740 | -0.803187 | 3.929167e-49 | -8.615850e-47 |
| Msa0080020 | Msa0427260 | -0.824011 | 1.016893e-53 | -8.615850e-47 |
| Msa0080020 | Msa0428720 | -0.807408 | 5.129944e-50 | -8.615850e-47 |
| Msa0080020 | Msa0434140 | 0.853511 | 2.276544e-61 | -8.615850e-47 |
| Msa0080020 | Msa0434370 | 0.864482 | 1.177677e-64 | -8.615850e-47 |
| Msa0080020 | Msa0434660 | 0.826566 | 2.528497e-54 | -8.615850e-47 |
| Msa0080020 | Msa0456450 | -0.803539 | 3.321126e-49 | -8.615850e-47 |
| Msa0080020 | Msa0465420 | 0.807382 | 5.193900e-50 | -8.615850e-47 |
| Msa0080020 | Msa0477390 | 0.832859 | 7.432069e-56 | -8.615850e-47 |
| Msa0080020 | Msa0477660 | 0.817759 | 2.791310e-52 | -8.615850e-47 |
| Msa0080020 | Msa0478130 | 0.846680 | 1.865453e-59 | -8.615850e-47 |
| Msa0080020 | Msa0478190 | 0.865268 | 6.677786e-65 | -8.615850e-47 |
| Msa0080020 | Msa0511280 | 0.807195 | 5.691372e-50 | -8.615850e-47 |
| Msa0080020 | Msa0511380 | 0.856109 | 4.016773e-62 | -8.615850e-47 |
| Msa0080020 | Msa0514540 | 0.823287 | 1.502445e-53 | -8.615850e-47 |
| Msa0080020 | Msa0521720 | 0.820389 | 7.039447e-53 | -8.615850e-47 |
| Msa0080020 | Msa0522540 | 0.831676 | 1.458364e-55 | -8.615850e-47 |
| Msa0080020 | Msa0538050 | -0.831060 | 2.067261e-55 | -8.615850e-47 |
| Msa0080020 | Msa0548420 | 0.820643 | 6.154503e-53 | -8.615850e-47 |
| Msa0080020 | Msa0563440 | 0.804282 | 2.328419e-49 | -8.615850e-47 |
| Msa0080020 | Msa0569980 | -0.829419 | 5.202135e-55 | -8.615850e-47 |
| Msa0080020 | Msa0570600 | 0.818035 | 2.418318e-52 | -8.615850e-47 |
| Msa0080020 | Msa0572730 | -0.813967 | 1.957633e-51 | -8.615850e-47 |
| Msa0080020 | Msa0575950 | 0.817806 | 2.723997e-52 | -8.615850e-47 |
| Msa0080020 | Msa0585720 | -0.828588 | 8.271047e-55 | -8.615850e-47 |
| Msa0080020 | Msa0612880 | -0.812549 | 4.009570e-51 | -8.615850e-47 |
| Msa0080020 | Msa0615780 | 0.836898 | 7.144515e-57 | -8.615850e-47 |
| Msa0080020 | Msa0619690 | -0.804823 | 1.795157e-49 | -8.615850e-47 |
| Msa0080020 | Msa0625900 | -0.821463 | 3.983896e-53 | -8.615850e-47 |
| Msa0080020 | Msa0655200 | 0.834893 | 2.303369e-56 | -8.615850e-47 |
| Msa0080020 | Msa0663580 | -0.818395 | 2.004477e-52 | -8.615850e-47 |
| Msa0080020 | Msa0663690 | -0.816361 | 5.753515e-52 | -8.615850e-47 |
| Msa0080020 | Msa0671300 | -0.803793 | 2.942277e-49 | -8.615850e-47 |
| Msa0080020 | Msa0688610 | 0.836924 | 7.034295e-57 | -8.615850e-47 |
| Msa0080020 | Msa0695140 | 0.844358 | 7.945920e-59 | -8.615850e-47 |
| Msa0080020 | Msa0700410 | 0.815685 | 8.145948e-52 | -8.615850e-47 |
| Msa0080020 | Msa0705520 | 0.820527 | 6.542519e-53 | -8.615850e-47 |
| Msa0080020 | Msa0706130 | -0.820690 | 6.003915e-53 | -8.615850e-47 |
| Msa0080020 | Msa0707860 | -0.812812 | 3.511712e-51 | -8.615850e-47 |
| Msa0080020 | Msa0721930 | 0.815929 | 7.185536e-52 | -8.615850e-47 |
| Msa0080020 | Msa0734700 | 0.810303 | 1.232901e-50 | -8.615850e-47 |
| Msa0080020 | Msa0738460 | -0.811990 | 5.309740e-51 | -8.615850e-47 |
| Msa0080020 | Msa0756670 | -0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0080020 | Msa0762930 | 0.819670 | 1.028286e-52 | -8.615850e-47 |
| Msa0080020 | Msa0802950 | -0.800341 | 1.508411e-48 | -8.615850e-47 |
| Msa0080020 | Msa0805390 | 0.804408 | 2.191913e-49 | -8.615850e-47 |
| Msa0080020 | Msa0813610 | 0.809037 | 2.306726e-50 | -8.615850e-47 |
| Msa0080020 | Msa0828350 | 0.805043 | 1.614922e-49 | -8.615850e-47 |
| Msa0080020 | Msa0829580 | 0.803578 | 3.260810e-49 | -8.615850e-47 |
| Msa0080020 | Msa0831460 | -0.813184 | 2.910199e-51 | -8.615850e-47 |
| Msa0080020 | Msa0847140 | 0.801036 | 1.088010e-48 | -8.615850e-47 |
| Msa0080020 | Msa0854200 | 0.802481 | 5.496450e-49 | -8.615850e-47 |
| Msa0080020 | Msa0861400 | -0.807398 | 5.153075e-50 | -8.615850e-47 |
| Msa0080020 | Msa0882360 | 0.801708 | 7.927520e-49 | -8.615850e-47 |
| Msa0080020 | Msa0913520 | 0.802926 | 4.449323e-49 | -8.615850e-47 |
| Msa0080020 | Msa0921860 | 0.813459 | 2.532108e-51 | -8.615850e-47 |
| Msa0080020 | Msa0947420 | 0.823347 | 1.454278e-53 | -8.615850e-47 |
| Msa0080020 | Msa0958830 | 0.826609 | 2.469584e-54 | -8.615850e-47 |
| Msa0080020 | Msa0967900 | -0.809644 | 1.708876e-50 | -8.615850e-47 |
| Msa0080020 | Msa0987670 | 0.807266 | 5.497953e-50 | -8.615850e-47 |
| Msa0080020 | Msa1025440 | -0.800419 | 1.454120e-48 | -8.615850e-47 |
| Msa0080020 | Msa1026970 | 0.892850 | 1.084470e-74 | -8.615850e-47 |
| Msa0080020 | Msa1050970 | 0.813172 | 2.927892e-51 | -8.615850e-47 |
| Msa0080020 | Msa1066770 | 0.809079 | 2.259147e-50 | -8.615850e-47 |
| Msa0080020 | Msa1067000 | 0.821438 | 4.037604e-53 | -8.615850e-47 |
| Msa0080020 | Msa1071420 | 0.840900 | 6.579147e-58 | -8.615850e-47 |
| Msa0080020 | Msa1074210 | 0.804853 | 1.769243e-49 | -8.615850e-47 |
| Msa0080020 | Msa1078600 | -0.817430 | 3.310641e-52 | -8.615850e-47 |
| Msa0080020 | Msa1078770 | -0.809640 | 1.712073e-50 | -8.615850e-47 |
| Msa0080020 | Msa1111900 | 0.854970 | 8.632381e-62 | -8.615850e-47 |
| Msa0080020 | Msa1133760 | 0.863059 | 3.260685e-64 | -8.615850e-47 |
| Msa0080020 | Msa1146980 | 0.809201 | 2.127015e-50 | -8.615850e-47 |
| Msa0080020 | Msa1154310 | 0.888481 | 5.681046e-73 | -8.615850e-47 |
| Msa0080020 | Msa1169600 | -0.811840 | 5.725536e-51 | -8.615850e-47 |
| Msa0080020 | Msa1171720 | 0.804481 | 2.115987e-49 | -8.615850e-47 |
| Msa0080020 | Msa1191530 | -0.806444 | 8.202268e-50 | -8.615850e-47 |
| Msa0080020 | Msa1191960 | -0.806727 | 7.149312e-50 | -8.615850e-47 |
| Msa0080020 | Msa1197720 | 0.837494 | 5.027651e-57 | -8.615850e-47 |
| Msa0080020 | Msa1197820 | 0.820755 | 5.801870e-53 | -8.615850e-47 |
| Msa0080020 | Msa1202710 | -0.815089 | 1.105195e-51 | -8.615850e-47 |
| Msa0080020 | Msa1204240 | 0.849916 | 2.377459e-60 | -8.615850e-47 |
| Msa0080020 | Msa1204870 | -0.804987 | 1.659138e-49 | -8.615850e-47 |
| Msa0080020 | Msa1204900 | -0.815561 | 8.678265e-52 | -8.615850e-47 |
| Msa0080020 | Msa1208530 | 0.854397 | 1.265187e-61 | -8.615850e-47 |
| Msa0080020 | Msa1209990 | -0.800315 | 1.526508e-48 | -8.615850e-47 |
| Msa0080020 | Msa1213860 | 0.837050 | 6.532951e-57 | -8.615850e-47 |
| Msa0080020 | Msa1214710 | 0.822620 | 2.149403e-53 | -8.615850e-47 |
| Msa0080020 | Msa1214780 | 0.832940 | 7.097257e-56 | -8.615850e-47 |
| Msa0080020 | Msa1228600 | -0.822650 | 2.115168e-53 | -8.615850e-47 |
| Msa0080020 | Msa1251410 | 0.832548 | 8.879507e-56 | -8.615850e-47 |
| Msa0080020 | Msa1251500 | 0.831076 | 2.049010e-55 | -8.615850e-47 |
| Msa0080020 | Msa1256490 | -0.809867 | 1.530012e-50 | -8.615850e-47 |
| Msa0080020 | Msa1262420 | 0.800223 | 1.593995e-48 | -8.615850e-47 |
| Msa0080020 | Msa1282670 | 0.811857 | 5.676279e-51 | -8.615850e-47 |
| Msa0080020 | Msa1292140 | 0.827627 | 1.408979e-54 | -8.615850e-47 |
| Msa0080020 | Msa1296810 | -0.803051 | 4.191836e-49 | -8.615850e-47 |
| Msa0080020 | Msa1300730 | 0.825715 | 4.030212e-54 | -8.615850e-47 |
| Msa0080020 | Msa1301610 | -0.811044 | 8.522521e-51 | -8.615850e-47 |
| Msa0080020 | Msa1321840 | 0.806626 | 7.507075e-50 | -8.615850e-47 |
| Msa0080020 | Msa1330220 | 0.802988 | 4.319400e-49 | -8.615850e-47 |
| Msa0080020 | Msa1342360 | -0.803228 | 3.852669e-49 | -8.615850e-47 |
| Msa0080020 | Msa1348860 | -0.804276 | 2.335166e-49 | -8.615850e-47 |
| Msa0080020 | Msa1359520 | 0.817081 | 3.968037e-52 | -8.615850e-47 |
| Msa0080020 | Msa1361580 | -0.801705 | 7.938349e-49 | -8.615850e-47 |
| Msa0080020 | Msa1369830 | 0.844806 | 6.017923e-59 | -8.615850e-47 |
| Msa0080020 | Msa1371540 | -0.800729 | 1.257343e-48 | -8.615850e-47 |
| Msa0080020 | Msa1375640 | 0.805559 | 1.259274e-49 | -8.615850e-47 |
| Msa0080020 | Msa1375730 | 0.846310 | 2.353587e-59 | -8.615850e-47 |
| Msa0080020 | Msa1377980 | -0.810872 | 9.285231e-51 | -8.615850e-47 |
| Msa0080020 | Msa1395380 | -0.805371 | 1.378698e-49 | -8.615850e-47 |
| Msa0080020 | Msa1401640 | -0.810157 | 1.325293e-50 | -8.615850e-47 |
| Msa0080020 | Msa1403940 | 0.828022 | 1.132245e-54 | -8.615850e-47 |
| Msa0080020 | Msa1408280 | -0.811347 | 7.326046e-51 | -8.615850e-47 |
| Msa0080020 | Msa1412270 | -0.811884 | 5.598677e-51 | -8.615850e-47 |
| Msa0080020 | Msa1422160 | -0.802118 | 6.529292e-49 | -8.615850e-47 |
| Msa0080020 | Msa1429810 | 0.813574 | 2.389546e-51 | -8.615850e-47 |
| Msa0080020 | Msa1434300 | 0.830584 | 2.704945e-55 | -8.615850e-47 |
| Msa0080020 | Msa1453180 | -0.800387 | 1.475808e-48 | -8.615850e-47 |
| Msa0080020 | Msa1454300 | -0.808090 | 3.673434e-50 | -8.615850e-47 |
| Msa0080020 | Msa1456180 | -0.811967 | 5.371700e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080020 | MtrunA17_Chr1g0186431 | 95.652 | 759 | 10 | 1 | 1 | 736 | 1 | 759 | 0.0 | 1481 |
| Msa0080020 | MtrunA17_Chr1g0168161 | 69.302 | 759 | 203 | 5 | 1 | 731 | 1 | 757 | 0.0 | 1030 |
| Msa0080020 | MtrunA17_Chr7g0274831 | 56.166 | 746 | 281 | 7 | 23 | 734 | 28 | 761 | 0.0 | 857 |
| Msa0080020 | MtrunA17_Chr1g0190021 | 55.615 | 748 | 293 | 9 | 19 | 734 | 18 | 758 | 0.0 | 812 |
| Msa0080020 | MtrunA17_Chr4g0013831 | 41.813 | 739 | 378 | 19 | 29 | 727 | 5 | 731 | 1.31e-172 | 513 |
| Msa0080020 | MtrunA17_Chr7g0269631 | 40.700 | 629 | 329 | 13 | 29 | 622 | 5 | 624 | 1.95e-125 | 387 |
| Msa0080020 | MtrunA17_Chr4g0077091 | 86.667 | 75 | 9 | 1 | 663 | 736 | 1 | 75 | 1.81e-35 | 128 |
| Msa0080020 | MtrunA17_Chr8g0377481 | 31.579 | 133 | 82 | 3 | 608 | 732 | 837 | 968 | 5.98e-15 | 79.3 |
| Msa0080020 | MtrunA17_Chr8g0377481 | 22.193 | 383 | 235 | 10 | 344 | 667 | 371 | 749 | 2.51e-11 | 67.4 |
| Msa0080020 | MtrunA17_Chr3g0122391 | 30.534 | 131 | 83 | 3 | 608 | 731 | 895 | 1024 | 3.81e-14 | 76.6 |
| Msa0080020 | MtrunA17_Chr3g0122391 | 26.174 | 149 | 110 | 0 | 344 | 492 | 419 | 567 | 1.95e-12 | 70.9 |
| Msa0080020 | MtrunA17_Chr5g0405701 | 32.374 | 139 | 93 | 1 | 355 | 492 | 499 | 637 | 7.21e-13 | 72.4 |
| Msa0080020 | MtrunA17_Chr8g0371601 | 29.496 | 139 | 97 | 1 | 355 | 492 | 461 | 599 | 1.23e-12 | 71.6 |
| Msa0080020 | MtrunA17_Chr5g0447641 | 26.543 | 162 | 119 | 0 | 344 | 505 | 596 | 757 | 4.46e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080020 | AT3G23150.1 | 59.335 | 782 | 259 | 15 | 1 | 735 | 1 | 770 | 0.0 | 865 |
| Msa0080020 | AT3G04580.2 | 57.181 | 745 | 279 | 11 | 23 | 731 | 21 | 761 | 0.0 | 808 |
| Msa0080020 | AT3G04580.1 | 57.181 | 745 | 279 | 11 | 23 | 731 | 21 | 761 | 0.0 | 808 |
| Msa0080020 | AT3G23150.2 | 64.632 | 557 | 177 | 9 | 1 | 546 | 1 | 548 | 0.0 | 684 |
| Msa0080020 | AT1G04310.1 | 52.922 | 616 | 247 | 10 | 9 | 589 | 16 | 623 | 0.0 | 587 |
| Msa0080020 | AT1G04310.2 | 52.922 | 616 | 247 | 10 | 9 | 589 | 16 | 623 | 0.0 | 587 |
| Msa0080020 | AT1G66340.1 | 39.628 | 752 | 390 | 18 | 29 | 734 | 4 | 737 | 2.20e-167 | 500 |
| Msa0080020 | AT2G40940.1 | 45.299 | 468 | 251 | 5 | 29 | 492 | 4 | 470 | 1.24e-121 | 377 |
| Msa0080020 | AT1G27320.1 | 21.552 | 464 | 305 | 11 | 325 | 734 | 410 | 868 | 1.76e-15 | 81.3 |
| Msa0080020 | AT1G27320.1 | 26.966 | 178 | 99 | 5 | 580 | 731 | 856 | 1028 | 4.88e-12 | 70.1 |
| Msa0080020 | AT5G35750.1 | 23.567 | 471 | 275 | 16 | 332 | 735 | 565 | 1017 | 4.36e-14 | 77.0 |
| Msa0080020 | AT5G35750.1 | 30.263 | 152 | 83 | 3 | 601 | 731 | 1024 | 1173 | 6.07e-13 | 73.2 |
| Msa0080020 | AT2G17820.1 | 30.935 | 139 | 95 | 1 | 355 | 492 | 488 | 626 | 2.71e-12 | 71.2 |
| Msa0080020 | AT2G01830.2 | 29.851 | 134 | 81 | 3 | 607 | 728 | 940 | 1072 | 2.83e-11 | 67.8 |
| Msa0080020 | AT2G01830.1 | 29.851 | 134 | 81 | 3 | 607 | 728 | 917 | 1049 | 3.03e-11 | 67.8 |
| Msa0080020 | AT2G01830.4 | 29.851 | 134 | 81 | 3 | 607 | 728 | 917 | 1049 | 3.03e-11 | 67.8 |
| Msa0080020 | AT2G01830.6 | 29.851 | 134 | 81 | 3 | 607 | 728 | 917 | 1049 | 3.03e-11 | 67.8 |
| Msa0080020 | AT2G01830.3 | 29.851 | 134 | 81 | 3 | 607 | 728 | 917 | 1049 | 3.03e-11 | 67.8 |
| Msa0080020 | AT2G01830.5 | 29.851 | 134 | 81 | 3 | 607 | 728 | 929 | 1061 | 3.23e-11 | 67.4 |
Find 174 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCCTATGCACTCGATTT+TGG | 0.157778 | 1_2:-58181675 | Msa0080020:CDS |
| TTTCTGAATGGTTGGACTTA+TGG | 0.204071 | 1_2:-58182526 | Msa0080020:CDS |
| GTGGACTATTGAGAGTATTT+TGG | 0.244417 | 1_2:-58182698 | Msa0080020:CDS |
| CCTTTGGAGATAAGGTCTTT+TGG | 0.244781 | 1_2:-58181512 | Msa0080020:CDS |
| CAAATGCATGTGTGTTTATA+AGG | 0.254306 | 1_2:-58181453 | Msa0080020:CDS |
| TTCCATTCAAGTCATTCTTT+TGG | 0.259941 | 1_2:-58180228 | Msa0080020:CDS |
| TGAAGTCTCATTCTTGTTCT+TGG | 0.266032 | 1_2:-58179925 | Msa0080020:three_prime_UTR |
| GGAAGTTTAAAAGCGGAAAT+AGG | 0.304993 | 1_2:-58180157 | Msa0080020:CDS |
| GCAGTCAAGGCAACAATTAT+AGG | 0.308408 | 1_2:+58180134 | None:intergenic |
| GTCTTTACCAAACCATGTTA+TGG | 0.315997 | 1_2:-58181402 | Msa0080020:CDS |
| GCGCTTGCTGTTTCCAGTCT+TGG | 0.319928 | 1_2:-58182046 | Msa0080020:CDS |
| CAGACCTCTCAACATTGAAT+TGG | 0.323833 | 1_2:+58180382 | None:intergenic |
| AGCTCAGTGTCCTCAGGTCC+CGG | 0.332201 | 1_2:-58181158 | Msa0080020:CDS |
| AATTAAGGTGGTTGCTGATC+AGG | 0.332673 | 1_2:-58181858 | Msa0080020:CDS |
| TTCTTCTTCGGTTTCAATTA+CGG | 0.333952 | 1_2:-58180460 | Msa0080020:CDS |
| TTATAGAACACAGTTCTCTT+TGG | 0.335971 | 1_2:-58179895 | Msa0080020:three_prime_UTR |
| GACATCTCTACGTGGAAAAT+TGG | 0.336590 | 1_2:+58179859 | None:intergenic |
| TGTATGCAGATTGGTGTTAA+TGG | 0.343123 | 1_2:-58180083 | Msa0080020:CDS |
| GTGGAGCTTTCGAAAACATT+AGG | 0.351077 | 1_2:-58182232 | Msa0080020:CDS |
| CATATTGGTCTTGATTCTTC+CGG | 0.355811 | 1_2:-58181921 | Msa0080020:CDS |
| GTAAATATTAGATTTGAGAT+AGG | 0.360085 | 1_2:-58181209 | Msa0080020:CDS |
| TCAGGCTTGTTATGCCATAT+TGG | 0.362096 | 1_2:-58181936 | Msa0080020:CDS |
| TGCTTCTCAAAGTGAAGGTC+AGG | 0.367109 | 1_2:-58182402 | Msa0080020:CDS |
| TTTGAATGCCTTACTGTCAT+TGG | 0.369155 | 1_2:-58180263 | Msa0080020:CDS |
| CTCCAAATGCCTGATATAGA+TGG | 0.374320 | 1_2:-58180203 | Msa0080020:CDS |
| CTTATAAACACACATGCATT+TGG | 0.375755 | 1_2:+58181454 | None:intergenic |
| TCAGGAGCTGGAGATAATTA+AGG | 0.381209 | 1_2:-58181873 | Msa0080020:CDS |
| TCTTTACCAAACCATGTTAT+GGG | 0.386190 | 1_2:-58181401 | Msa0080020:CDS |
| ATCCATCTATATCAGGCATT+TGG | 0.388907 | 1_2:+58180201 | None:intergenic |
| GGATGATGGAAGATTTCCTT+TGG | 0.389319 | 1_2:-58181528 | Msa0080020:CDS |
| ACAACATCTGGATCAGTAAT+CGG | 0.399774 | 1_2:+58182115 | None:intergenic |
| TACTATTCTGTATACTACTT+TGG | 0.402484 | 1_2:-58182254 | Msa0080020:CDS |
| TGAGGAATACCGTGAGTATA+TGG | 0.405398 | 1_2:+58180494 | None:intergenic |
| GCTCGAACGTCCCTTTCAAA+TGG | 0.406052 | 1_2:-58182597 | Msa0080020:CDS |
| AAAGCATGACACTTCTTCTT+CGG | 0.410525 | 1_2:-58180472 | Msa0080020:CDS |
| GGATTGTAACCATGGGGAAG+GGG | 0.412828 | 1_2:-58181327 | Msa0080020:CDS |
| ACTTCGAATCCATCTATATC+AGG | 0.414647 | 1_2:+58180194 | None:intergenic |
| GATCCTAGTATTTCGAGTTT+CGG | 0.416197 | 1_2:-58181303 | Msa0080020:CDS |
| TTCCGTGACTTCCGCTTCTA+CGG | 0.417846 | 1_2:-58180288 | Msa0080020:CDS |
| TCAACTTATGAGAGAGAAGT+TGG | 0.419273 | 1_2:-58181795 | Msa0080020:CDS |
| CTTTAAGATTCTCACTGCCT+TGG | 0.419423 | 1_2:-58182467 | Msa0080020:CDS |
| AGTCAAGGGAGGAATGAAAA+AGG | 0.420629 | 1_2:-58181269 | Msa0080020:CDS |
| GAAGATTTCCTTTGGAGATA+AGG | 0.424573 | 1_2:-58181520 | Msa0080020:CDS |
| GATTGTAACCATGGGGAAGG+GGG | 0.427873 | 1_2:-58181326 | Msa0080020:CDS |
| TCCGTGACTTCCGCTTCTAC+GGG | 0.428889 | 1_2:-58180287 | Msa0080020:CDS |
| GAATGCTATGATGGCAAGCC+AGG | 0.432214 | 1_2:-58181738 | Msa0080020:CDS |
| CATGTGTGTTTATAAGGGCT+TGG | 0.432309 | 1_2:-58181447 | Msa0080020:CDS |
| TCGAAGTCGCCGCAAGGATT+CGG | 0.432385 | 1_2:-58180178 | Msa0080020:CDS |
| ACCTAGATCTTGGAGCAATC+AGG | 0.441634 | 1_2:-58181891 | Msa0080020:CDS |
| CTGCCGAAACTCGAAATACT+AGG | 0.444425 | 1_2:+58181300 | None:intergenic |
| GCTCCAAGATCTAGGTTCTT+CGG | 0.445823 | 1_2:+58181898 | None:intergenic |
| GCTCAGTGTCCTCAGGTCCC+GGG | 0.446282 | 1_2:-58181157 | Msa0080020:CDS |
| TTCTTCTGCACTTGCAGTCA+AGG | 0.446455 | 1_2:+58180121 | None:intergenic |
| ACTAGATGAGCTTGGTCTCC+AGG | 0.446804 | 1_2:+58181238 | None:intergenic |
| AGTTGATGCAAGGAAACTTA+TGG | 0.447288 | 1_2:-58180523 | Msa0080020:CDS |
| ATGTGTGTTTATAAGGGCTT+GGG | 0.448667 | 1_2:-58181446 | Msa0080020:CDS |
| TCATCACCCATAACATGGTT+TGG | 0.448703 | 1_2:+58181395 | None:intergenic |
| TCCTGATTGCTCCAAGATCT+AGG | 0.449928 | 1_2:+58181890 | None:intergenic |
| CGGAAGAATCAAGACCAATA+TGG | 0.450177 | 1_2:+58181922 | None:intergenic |
| GGCATTCGAATGGCAGCAAC+CGG | 0.452555 | 1_2:+58182004 | None:intergenic |
| GCAATTCCTTGCATCAAAAC+CGG | 0.454415 | 1_2:+58180047 | None:intergenic |
| CGGCCGAAGAACCTAGATCT+TGG | 0.454895 | 1_2:-58181901 | Msa0080020:CDS |
| CTCGAACGTCCCTTTCAAAT+GGG | 0.457846 | 1_2:-58182596 | Msa0080020:CDS |
| GCGCAATCGAGCTTTGCAAC+TGG | 0.458884 | 1_2:-58181768 | Msa0080020:CDS |
| AACAGTAGTGATTCTGAAGT+TGG | 0.461479 | 1_2:-58181182 | Msa0080020:CDS |
| TAATGGAGTAATCCGAAAAC+CGG | 0.467924 | 1_2:-58180066 | Msa0080020:CDS |
| GCATATGGTTGGGAATCTAC+TGG | 0.475238 | 1_2:-58181348 | Msa0080020:CDS |
| ACGAAATAAAGCAACTCAAG+AGG | 0.478092 | 1_2:+58182625 | None:intergenic |
| AGAAGAAGTGTCATGCTTTG+AGG | 0.480685 | 1_2:+58180476 | None:intergenic |
| GAATGCTTACTCAAGAGATT+CGG | 0.482071 | 1_2:-58182294 | Msa0080020:CDS |
| AAGTCATGAGTGATGGTATG+AGG | 0.483265 | 1_2:-58181697 | Msa0080020:CDS |
| TGGGATCTTGGACGGGAGGT+TGG | 0.484581 | 1_2:-58182355 | Msa0080020:CDS |
| GTTGGCAGCTCAGTGTCCTC+AGG | 0.485068 | 1_2:-58181164 | Msa0080020:CDS |
| TCTGAAATGAGTTTCTTGCC+TGG | 0.486268 | 1_2:+58181720 | None:intergenic |
| ATCCAAAAGAATGACTTGAA+TGG | 0.489294 | 1_2:+58180226 | None:intergenic |
| AAATGCATGTGTGTTTATAA+GGG | 0.490040 | 1_2:-58181452 | Msa0080020:CDS |
| TGGTCTTATTATGAAGCAAA+AGG | 0.490084 | 1_2:-58182335 | Msa0080020:CDS |
| CATCATTTATCAAGTTTGAA+AGG | 0.492324 | 1_2:+58181570 | None:intergenic |
| TAAATATTAGATTTGAGATA+GGG | 0.495686 | 1_2:-58181208 | Msa0080020:CDS |
| ATCTTGGAGCAATCAGGAGC+TGG | 0.497970 | 1_2:-58181885 | Msa0080020:CDS |
| TCCTTTGCTTCTCAAAGTGA+AGG | 0.498700 | 1_2:-58182407 | Msa0080020:CDS |
| TCATCATCACAATTACATCT+AGG | 0.500845 | 1_2:+58182730 | None:intergenic |
| GACAGCTCTGCAAAGGATGA+TGG | 0.501785 | 1_2:-58181542 | Msa0080020:CDS |
| TCCCGTAGAAGCGGAAGTCA+CGG | 0.504322 | 1_2:+58180286 | None:intergenic |
| TTTCGAGTTTCGGCAGACGC+TGG | 0.505966 | 1_2:-58181293 | Msa0080020:CDS |
| TGGATTGTAACCATGGGGAA+GGG | 0.508641 | 1_2:-58181328 | Msa0080020:CDS |
| TATTCTGTATACTACTTTGG+TGG | 0.509087 | 1_2:-58182251 | Msa0080020:CDS |
| GAGAGGTCTGCAAGTTCTGT+TGG | 0.509235 | 1_2:-58180369 | Msa0080020:CDS |
| ATTGTAACCATGGGGAAGGG+GGG | 0.512664 | 1_2:-58181325 | Msa0080020:CDS |
| TGGTGATTTCTTGATTGCTG+TGG | 0.516847 | 1_2:-58182662 | Msa0080020:CDS |
| AAGTGCAGAAGAAGATTTGT+GGG | 0.517262 | 1_2:-58180111 | Msa0080020:CDS |
| CTTACTGTCATTGGACCTGT+TGG | 0.517705 | 1_2:-58180254 | Msa0080020:CDS |
| ACCTTCACTTTGAGAAGCAA+AGG | 0.521628 | 1_2:+58182406 | None:intergenic |
| TAATAAATATAATCAAAGAA+TGG | 0.522312 | 1_2:-58179715 | Msa0080020:three_prime_UTR |
| CAACAGGTCCAATGACAGTA+AGG | 0.522523 | 1_2:+58180255 | None:intergenic |
| CTCAAGAGGGATTGAGAAGT+AGG | 0.523719 | 1_2:+58182639 | None:intergenic |
| TGTTTCTAGTGACGCAGGAC+CGG | 0.528437 | 1_2:-58182023 | Msa0080020:CDS |
| GTTGCGTTCTGAAGATTCCC+CGG | 0.528905 | 1_2:+58180409 | None:intergenic |
| AAATTACAAACACGTAACAT+TGG | 0.530189 | 1_2:+58181983 | None:intergenic |
| GGCGAGAAGGAATGCTATGA+TGG | 0.531744 | 1_2:-58181747 | Msa0080020:CDS |
| TCGGCAGACGCTGGAAGTCA+AGG | 0.534100 | 1_2:-58181284 | Msa0080020:CDS |
| AAACTTGATAAATGATGCCA+TGG | 0.538571 | 1_2:-58181564 | Msa0080020:CDS |
| CTCAAAAGAATTCTGATGCA+AGG | 0.538760 | 1_2:-58180017 | Msa0080020:CDS |
| ATCTACTGGATTGTAACCAT+GGG | 0.542949 | 1_2:-58181334 | Msa0080020:CDS |
| TTGCGTTCTGAAGATTCCCC+GGG | 0.544742 | 1_2:+58180410 | None:intergenic |
| GAACAAGGACCCATTTGAAA+GGG | 0.546654 | 1_2:+58182587 | None:intergenic |
| TGAACAAGGACCCATTTGAA+AGG | 0.548158 | 1_2:+58182586 | None:intergenic |
| GCAATAGCCATCTCTGAACC+CGG | 0.551030 | 1_2:-58180428 | Msa0080020:CDS |
| GGCAGTGAGAATCTTAAAGA+TGG | 0.551039 | 1_2:+58182471 | None:intergenic |
| ACTTGAATGGAAGATCCAAC+AGG | 0.554016 | 1_2:+58180239 | None:intergenic |
| CAAGTGCAGAAGAAGATTTG+TGG | 0.554779 | 1_2:-58180112 | Msa0080020:CDS |
| TAACAAGCCTGAGTTAGCTC+AGG | 0.557598 | 1_2:+58181947 | None:intergenic |
| ACATCACCACTAGATGAGCT+TGG | 0.559230 | 1_2:+58181230 | None:intergenic |
| CGAAATAAAGCAACTCAAGA+GGG | 0.560282 | 1_2:+58182626 | None:intergenic |
| TTCAGAGATGGCTATTGCAA+TGG | 0.562065 | 1_2:+58180433 | None:intergenic |
| TGTTAATTGCAGTTGATGCA+AGG | 0.562733 | 1_2:-58180533 | Msa0080020:intron |
| CTCAGTGTCCTCAGGTCCCG+GGG | 0.565025 | 1_2:-58181156 | Msa0080020:intron |
| AATCTACTGGATTGTAACCA+TGG | 0.568873 | 1_2:-58181335 | Msa0080020:CDS |
| TGGGAAAGATGTATGCAGAT+TGG | 0.570128 | 1_2:-58180092 | Msa0080020:CDS |
| ATCCTTTGCAGAGCTGTCCA+TGG | 0.572923 | 1_2:+58181547 | None:intergenic |
| GTGATGATGAGAACAGTTTG+TGG | 0.575845 | 1_2:-58182717 | Msa0080020:CDS |
| CTGGATTGTAACCATGGGGA+AGG | 0.575928 | 1_2:-58181329 | Msa0080020:CDS |
| AAAGACATGGGATCTTGGAC+GGG | 0.576526 | 1_2:-58182362 | Msa0080020:CDS |
| TACGTGGAAAATTGGTAGCA+AGG | 0.578298 | 1_2:+58179867 | None:intergenic |
| AAAAGACATGGGATCTTGGA+CGG | 0.578361 | 1_2:-58182363 | Msa0080020:CDS |
| GAATGAACAGAAGCTTATTG+TGG | 0.580973 | 1_2:-58181618 | Msa0080020:CDS |
| CAATAGCCATCTCTGAACCC+GGG | 0.581848 | 1_2:-58180427 | Msa0080020:CDS |
| TCCTCTCATCACCCATAACA+TGG | 0.582290 | 1_2:+58181390 | None:intergenic |
| GTCACTAGAAACACCAAGAC+TGG | 0.584089 | 1_2:+58182033 | None:intergenic |
| CAAGATCTAGGTTCTTCGGC+CGG | 0.584183 | 1_2:+58181902 | None:intergenic |
| CAGAATAGTATGTCTATCGA+GGG | 0.585211 | 1_2:+58182267 | None:intergenic |
| GAGATGGCTATTGCAATGGA+AGG | 0.587280 | 1_2:+58180437 | None:intergenic |
| CGGCAGACGCTGGAAGTCAA+GGG | 0.589768 | 1_2:-58181283 | Msa0080020:CDS |
| AGGAACACCTGAGCTAACTC+AGG | 0.590712 | 1_2:-58181954 | Msa0080020:CDS |
| TGCAGCATGCGATAGAGCCA+CGG | 0.591811 | 1_2:+58181832 | None:intergenic |
| CCAAAAGACCTTATCTCCAA+AGG | 0.594431 | 1_2:+58181512 | None:intergenic |
| ACCATGTTATGGGTGATGAG+AGG | 0.595070 | 1_2:-58181391 | Msa0080020:CDS |
| ATGTTATGGGTGATGAGAGG+AGG | 0.595173 | 1_2:-58181388 | Msa0080020:CDS |
| GAGCTTTGCAACTGGCGAGA+AGG | 0.595611 | 1_2:-58181760 | Msa0080020:CDS |
| AGATTCCCCGGGTTCAGAGA+TGG | 0.597080 | 1_2:+58180421 | None:intergenic |
| GCTTCTCAAAGTGAAGGTCA+GGG | 0.597196 | 1_2:-58182401 | Msa0080020:CDS |
| ATGGATTCGAAGTCGCCGCA+AGG | 0.597554 | 1_2:-58180184 | Msa0080020:CDS |
| ATGTCCTACCCCGGGACCTG+AGG | 0.597819 | 1_2:+58181148 | None:intergenic |
| TCACTCATGAATTGAACGCA+AGG | 0.600049 | 1_2:-58182156 | Msa0080020:CDS |
| GCATTCAAATCCCGTAGAAG+CGG | 0.602716 | 1_2:+58180277 | None:intergenic |
| TATTCCAATTCAATGTTGAG+AGG | 0.606759 | 1_2:-58180386 | Msa0080020:CDS |
| TGTTATGGGTGATGAGAGGA+GGG | 0.608371 | 1_2:-58181387 | Msa0080020:CDS |
| AAACACACATGCATTTGGCA+AGG | 0.611821 | 1_2:+58181459 | None:intergenic |
| GACATGGGATCTTGGACGGG+AGG | 0.611959 | 1_2:-58182359 | Msa0080020:CDS |
| TTTCAGAAAGTCATGAGTGA+TGG | 0.612216 | 1_2:-58181704 | Msa0080020:CDS |
| AGATACACACAAGAGGATAG+AGG | 0.612399 | 1_2:+58182774 | None:intergenic |
| TTTAAACTTCCGAATCCTTG+CGG | 0.614777 | 1_2:+58180169 | None:intergenic |
| ACAGAATAGTATGTCTATCG+AGG | 0.617871 | 1_2:+58182266 | None:intergenic |
| CTTGGTGTTTCTAGTGACGC+AGG | 0.622071 | 1_2:-58182028 | Msa0080020:CDS |
| AATCCCAAAATCGAGTGCAT+AGG | 0.622628 | 1_2:+58181671 | None:intergenic |
| ACGTAACATTGGCATTCGAA+TGG | 0.630068 | 1_2:+58181994 | None:intergenic |
| GATGCAAGGAAACTTATGGT+TGG | 0.630539 | 1_2:-58180519 | Msa0080020:CDS |
| CGCAGTTGCACAAGACACCA+AGG | 0.633662 | 1_2:+58182450 | None:intergenic |
| TGCCATGGACAGCTCTGCAA+AGG | 0.638516 | 1_2:-58181549 | Msa0080020:CDS |
| TCTTATTATGAAGCAAAAGG+AGG | 0.642117 | 1_2:-58182332 | Msa0080020:CDS |
| GGTTGCTGATCAGGTTGCCG+TGG | 0.646373 | 1_2:-58181849 | Msa0080020:CDS |
| TAAAAGCAATGAACTGAACA+AGG | 0.647813 | 1_2:+58182572 | None:intergenic |
| TTGTTGCAGATACACACAAG+AGG | 0.652660 | 1_2:+58182767 | None:intergenic |
| GTTTGCAAAATTGTGCTGTG+TGG | 0.653112 | 1_2:-58182210 | Msa0080020:CDS |
| TGGAGACCAAGCTCATCTAG+TGG | 0.665111 | 1_2:-58181236 | Msa0080020:CDS |
| AGGATTCGGAAGTTTAAAAG+CGG | 0.670736 | 1_2:-58180164 | Msa0080020:CDS |
| GGAGCTGGAGATAATTAAGG+TGG | 0.673703 | 1_2:-58181870 | Msa0080020:CDS |
| ACCATAAGCTGAAAAGTGTG+AGG | 0.673832 | 1_2:+58182502 | None:intergenic |
| AATAGCCATCTCTGAACCCG+GGG | 0.674767 | 1_2:-58180426 | Msa0080020:CDS |
| TCATGAGTGATGGTATGAGG+AGG | 0.683443 | 1_2:-58181694 | Msa0080020:CDS |
| TGGTTGGTACCATATACTCA+CGG | 0.687045 | 1_2:-58180503 | Msa0080020:CDS |
| CAGACGCTGGAAGTCAAGGG+AGG | 0.709276 | 1_2:-58181280 | Msa0080020:CDS |
| TCTACTGGATTGTAACCATG+GGG | 0.741326 | 1_2:-58181333 | Msa0080020:CDS |
| TTATGTATGACATCTCTACG+TGG | 0.754667 | 1_2:+58179851 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAATATAATCAAAGAA+TGG | - | chr1_2:58182716-58182735 | Msa0080020:CDS | 10.0% |
| !!! | TAAATATTAGATTTGAGATA+GGG | - | chr1_2:58181223-58181242 | Msa0080020:CDS | 15.0% |
| !!! | TTACGTGTTTGTAATTTTAA+AGG | - | chr1_2:58180454-58180473 | Msa0080020:CDS | 20.0% |
| !!! | GTAAATATTAGATTTGAGAT+AGG | - | chr1_2:58181222-58181241 | Msa0080020:CDS | 20.0% |
| !!! | AGTTACATTGTTTGTTATAT+GGG | - | chr1_2:58181368-58181387 | Msa0080020:CDS | 20.0% |
| !!! | TGTAGTTTTTAATTTTGCTT+AGG | - | chr1_2:58181778-58181797 | Msa0080020:CDS | 20.0% |
| !! | AAAAATTAACTCAGAATACA+AGG | + | chr1_2:58181840-58181859 | None:intergenic | 20.0% |
| !! | GAAATTAAGTAATCAAATCA+AGG | + | chr1_2:58181869-58181888 | None:intergenic | 20.0% |
| !!! | ATTGCTTTTATAGTACTATG+TGG | - | chr1_2:58179872-58179891 | Msa0080020:three_prime_UTR | 25.0% |
| ! | TACTATTCTGTATACTACTT+TGG | - | chr1_2:58180177-58180196 | Msa0080020:CDS | 25.0% |
| ! | TCCAGATGTTGTAAAAATTA+AGG | - | chr1_2:58180327-58180346 | Msa0080020:CDS | 25.0% |
| ! | CCAGATGTTGTAAAAATTAA+GGG | - | chr1_2:58180328-58180347 | Msa0080020:CDS | 25.0% |
| ! | AAATTACAAACACGTAACAT+TGG | + | chr1_2:58180451-58180470 | None:intergenic | 25.0% |
| ! | CATCATTTATCAAGTTTGAA+AGG | + | chr1_2:58180864-58180883 | None:intergenic | 25.0% |
| ! | AAATGCATGTGTGTTTATAA+GGG | - | chr1_2:58180979-58180998 | Msa0080020:intron | 25.0% |
| !!! | GAGTTACATTGTTTGTTATA+TGG | - | chr1_2:58181367-58181386 | Msa0080020:CDS | 25.0% |
| ! | GCAAGGAAATATTTGAAAAA+TGG | - | chr1_2:58182431-58182450 | Msa0080020:CDS | 25.0% |
| ! | GGAAATATTTGAAAAATGGA+TGG | - | chr1_2:58182435-58182454 | Msa0080020:CDS | 25.0% |
| TCATCATCACAATTACATCT+AGG | + | chr1_2:58179704-58179723 | None:intergenic | 30.0% | |
| TAAAAGCAATGAACTGAACA+AGG | + | chr1_2:58179862-58179881 | None:intergenic | 30.0% | |
| !! | TGGTCTTATTATGAAGCAAA+AGG | - | chr1_2:58180096-58180115 | Msa0080020:CDS | 30.0% |
| TCTTATTATGAAGCAAAAGG+AGG | - | chr1_2:58180099-58180118 | Msa0080020:CDS | 30.0% | |
| TATTCTGTATACTACTTTGG+TGG | - | chr1_2:58180180-58180199 | Msa0080020:CDS | 30.0% | |
| ! | ATCACTGTCTTTTCTTCATT+TGG | + | chr1_2:58180250-58180269 | None:intergenic | 30.0% |
| ! | CCCTTAATTTTTACAACATC+TGG | + | chr1_2:58180331-58180350 | None:intergenic | 30.0% |
| GTAAAAATTAAGGGAAGCAA+TGG | - | chr1_2:58180337-58180356 | Msa0080020:CDS | 30.0% | |
| !! | CGTGTTTGTAATTTTAAAGG+AGG | - | chr1_2:58180457-58180476 | Msa0080020:CDS | 30.0% |
| AAACTTGATAAATGATGCCA+TGG | - | chr1_2:58180867-58180886 | Msa0080020:intron | 30.0% | |
| CTTATAAACACACATGCATT+TGG | + | chr1_2:58180980-58180999 | None:intergenic | 30.0% | |
| CAAATGCATGTGTGTTTATA+AGG | - | chr1_2:58180978-58180997 | Msa0080020:intron | 30.0% | |
| TCTTTACCAAACCATGTTAT+GGG | - | chr1_2:58181030-58181049 | Msa0080020:intron | 30.0% | |
| !!! | TTTTCAGGTGATTTTGCATA+TGG | - | chr1_2:58181068-58181087 | Msa0080020:intron | 30.0% |
| ATATACCAGTGATAGATATG+AGG | - | chr1_2:58181304-58181323 | Msa0080020:CDS | 30.0% | |
| TATACCAGTGATAGATATGA+GGG | - | chr1_2:58181305-58181324 | Msa0080020:CDS | 30.0% | |
| !! | TTGTTTGTTATATGGGTTCA+TGG | - | chr1_2:58181375-58181394 | Msa0080020:CDS | 30.0% |
| ATGTCACACAAACAATGAAA+AGG | + | chr1_2:58181496-58181515 | None:intergenic | 30.0% | |
| GTGACATAAATAGCTGAATT+TGG | - | chr1_2:58181509-58181528 | Msa0080020:CDS | 30.0% | |
| AACATATTCCACAGTATTCA+AGG | + | chr1_2:58181577-58181596 | None:intergenic | 30.0% | |
| TAATGCGTGTTCGATATATT+TGG | - | chr1_2:58181734-58181753 | Msa0080020:CDS | 30.0% | |
| TTCTTCTTCGGTTTCAATTA+CGG | - | chr1_2:58181971-58181990 | Msa0080020:CDS | 30.0% | |
| TATTCCAATTCAATGTTGAG+AGG | - | chr1_2:58182045-58182064 | Msa0080020:CDS | 30.0% | |
| ! | TTCCATTCAAGTCATTCTTT+TGG | - | chr1_2:58182203-58182222 | Msa0080020:CDS | 30.0% |
| ATCCAAAAGAATGACTTGAA+TGG | + | chr1_2:58182208-58182227 | None:intergenic | 30.0% | |
| TTATAGAACACAGTTCTCTT+TGG | - | chr1_2:58182536-58182555 | Msa0080020:CDS | 30.0% | |
| !!! | GTGGACTATTGAGAGTATTT+TGG | - | chr1_2:58179733-58179752 | Msa0080020:three_prime_UTR | 35.0% |
| !!! | ATTTTGGAGTGTCAAAGAGT+TGG | - | chr1_2:58179749-58179768 | Msa0080020:three_prime_UTR | 35.0% |
| CGAAATAAAGCAACTCAAGA+GGG | + | chr1_2:58179808-58179827 | None:intergenic | 35.0% | |
| ACGAAATAAAGCAACTCAAG+AGG | + | chr1_2:58179809-58179828 | None:intergenic | 35.0% | |
| ! | GGATTGACACATTTTCTGAA+TGG | - | chr1_2:58179893-58179912 | Msa0080020:three_prime_UTR | 35.0% |
| ! | TGACACATTTTCTGAATGGT+TGG | - | chr1_2:58179897-58179916 | Msa0080020:three_prime_UTR | 35.0% |
| TTTCTGAATGGTTGGACTTA+TGG | - | chr1_2:58179905-58179924 | Msa0080020:three_prime_UTR | 35.0% | |
| TCATGCTCAAGAAAAAGACA+TGG | - | chr1_2:58180056-58180075 | Msa0080020:CDS | 35.0% | |
| CATGCTCAAGAAAAAGACAT+GGG | - | chr1_2:58180057-58180076 | Msa0080020:CDS | 35.0% | |
| AAGAAAAAGACATGGGATCT+TGG | - | chr1_2:58180064-58180083 | Msa0080020:CDS | 35.0% | |
| GAATGCTTACTCAAGAGATT+CGG | - | chr1_2:58180137-58180156 | Msa0080020:CDS | 35.0% | |
| CAGAATAGTATGTCTATCGA+GGG | + | chr1_2:58180167-58180186 | None:intergenic | 35.0% | |
| ACAGAATAGTATGTCTATCG+AGG | + | chr1_2:58180168-58180187 | None:intergenic | 35.0% | |
| ACAACATCTGGATCAGTAAT+CGG | + | chr1_2:58180319-58180338 | None:intergenic | 35.0% | |
| !! | CATATTGGTCTTGATTCTTC+CGG | - | chr1_2:58180510-58180529 | Msa0080020:CDS | 35.0% |
| TCAACTTATGAGAGAGAAGT+TGG | - | chr1_2:58180636-58180655 | Msa0080020:intron | 35.0% | |
| TTTCAGAAAGTCATGAGTGA+TGG | - | chr1_2:58180727-58180746 | Msa0080020:intron | 35.0% | |
| GAATGAACAGAAGCTTATTG+TGG | - | chr1_2:58180813-58180832 | Msa0080020:intron | 35.0% | |
| ! | GAAGATTTCCTTTGGAGATA+AGG | - | chr1_2:58180911-58180930 | Msa0080020:intron | 35.0% |
| !! | CTTTGGAGATAAGGTCTTTT+GGG | - | chr1_2:58180920-58180939 | Msa0080020:intron | 35.0% |
| ATGTGTGTTTATAAGGGCTT+GGG | - | chr1_2:58180985-58181004 | Msa0080020:intron | 35.0% | |
| GTCTTTACCAAACCATGTTA+TGG | - | chr1_2:58181029-58181048 | Msa0080020:intron | 35.0% | |
| ! | AGGTGATTTTGCATATGGTT+GGG | - | chr1_2:58181073-58181092 | Msa0080020:intron | 35.0% |
| AATCTACTGGATTGTAACCA+TGG | - | chr1_2:58181096-58181115 | Msa0080020:intron | 35.0% | |
| ATCTACTGGATTGTAACCAT+GGG | - | chr1_2:58181097-58181116 | Msa0080020:intron | 35.0% | |
| !! | GATCCTAGTATTTCGAGTTT+CGG | - | chr1_2:58181128-58181147 | Msa0080020:intron | 35.0% |
| !! | AACAGTAGTGATTCTGAAGT+TGG | - | chr1_2:58181249-58181268 | Msa0080020:CDS | 35.0% |
| ! | TGAGCTTTAGTATTTGCAAG+AGG | - | chr1_2:58181333-58181352 | Msa0080020:CDS | 35.0% |
| AACAAACAATGTAACTCACC+TGG | + | chr1_2:58181364-58181383 | None:intergenic | 35.0% | |
| ACATCTTGCGAAACTGAATT+TGG | - | chr1_2:58181453-58181472 | Msa0080020:CDS | 35.0% | |
| ! | TGTGTTTTCCTTGAATACTG+TGG | - | chr1_2:58181566-58181585 | Msa0080020:CDS | 35.0% |
| AGGATTCTAACTAACATCAC+AGG | + | chr1_2:58181645-58181664 | None:intergenic | 35.0% | |
| ! | TGCTCTTATGATGGGAAAAT+AGG | + | chr1_2:58181665-58181684 | None:intergenic | 35.0% |
| ! | TCCAGATTTGCTCTTATGAT+GGG | + | chr1_2:58181673-58181692 | None:intergenic | 35.0% |
| ! | TTCCAGATTTGCTCTTATGA+TGG | + | chr1_2:58181674-58181693 | None:intergenic | 35.0% |
| ! | CATAAGAGCAAATCTGGAAT+CGG | - | chr1_2:58181675-58181694 | Msa0080020:CDS | 35.0% |
| ! | ATCTGGAATCGGAATGTTAT+TGG | - | chr1_2:58181686-58181705 | Msa0080020:CDS | 35.0% |
| !! | GTTATTGGTGTTGTATCTCT+AGG | - | chr1_2:58181701-58181720 | Msa0080020:CDS | 35.0% |
| ! | TGTTAATTGCAGTTGATGCA+AGG | - | chr1_2:58181898-58181917 | Msa0080020:CDS | 35.0% |
| ! | AGTTGATGCAAGGAAACTTA+TGG | - | chr1_2:58181908-58181927 | Msa0080020:CDS | 35.0% |
| AAAGCATGACACTTCTTCTT+CGG | - | chr1_2:58181959-58181978 | Msa0080020:CDS | 35.0% | |
| CAAAAACTGCTTCAGAAACT+AGG | - | chr1_2:58182117-58182136 | Msa0080020:CDS | 35.0% | |
| TTTGAATGCCTTACTGTCAT+TGG | - | chr1_2:58182168-58182187 | Msa0080020:CDS | 35.0% | |
| ATCCATCTATATCAGGCATT+TGG | + | chr1_2:58182233-58182252 | None:intergenic | 35.0% | |
| ACTTCGAATCCATCTATATC+AGG | + | chr1_2:58182240-58182259 | None:intergenic | 35.0% | |
| TTTAAACTTCCGAATCCTTG+CGG | + | chr1_2:58182265-58182284 | None:intergenic | 35.0% | |
| AGGATTCGGAAGTTTAAAAG+CGG | - | chr1_2:58182267-58182286 | Msa0080020:CDS | 35.0% | |
| GGAAGTTTAAAAGCGGAAAT+AGG | - | chr1_2:58182274-58182293 | Msa0080020:CDS | 35.0% | |
| AAGTGCAGAAGAAGATTTGT+GGG | - | chr1_2:58182320-58182339 | Msa0080020:CDS | 35.0% | |
| !! | TGTATGCAGATTGGTGTTAA+TGG | - | chr1_2:58182348-58182367 | Msa0080020:CDS | 35.0% |
| TAATGGAGTAATCCGAAAAC+CGG | - | chr1_2:58182365-58182384 | Msa0080020:CDS | 35.0% | |
| CTCAAAAGAATTCTGATGCA+AGG | - | chr1_2:58182414-58182433 | Msa0080020:CDS | 35.0% | |
| TGAAGTCTCATTCTTGTTCT+TGG | - | chr1_2:58182506-58182525 | Msa0080020:CDS | 35.0% | |
| TTATGTATGACATCTCTACG+TGG | + | chr1_2:58182583-58182602 | None:intergenic | 35.0% | |
| AGATACACACAAGAGGATAG+AGG | + | chr1_2:58179660-58179679 | None:intergenic | 40.0% | |
| TTGTTGCAGATACACACAAG+AGG | + | chr1_2:58179667-58179686 | None:intergenic | 40.0% | |
| ! | GTGATGATGAGAACAGTTTG+TGG | - | chr1_2:58179714-58179733 | Msa0080020:three_prime_UTR | 40.0% |
| TGGTGATTTCTTGATTGCTG+TGG | - | chr1_2:58179769-58179788 | Msa0080020:three_prime_UTR | 40.0% | |
| GAACAAGGACCCATTTGAAA+GGG | + | chr1_2:58179847-58179866 | None:intergenic | 40.0% | |
| TGAACAAGGACCCATTTGAA+AGG | + | chr1_2:58179848-58179867 | None:intergenic | 40.0% | |
| ! | TCCTCACACTTTTCAGCTTA+TGG | - | chr1_2:58179928-58179947 | Msa0080020:three_prime_UTR | 40.0% |
| ! | ACCATAAGCTGAAAAGTGTG+AGG | + | chr1_2:58179932-58179951 | None:intergenic | 40.0% |
| ! | TCACACTTTTCAGCTTATGG+TGG | - | chr1_2:58179931-58179950 | Msa0080020:three_prime_UTR | 40.0% |
| GGCAGTGAGAATCTTAAAGA+TGG | + | chr1_2:58179963-58179982 | None:intergenic | 40.0% | |
| !! | CTTTAAGATTCTCACTGCCT+TGG | - | chr1_2:58179964-58179983 | Msa0080020:three_prime_UTR | 40.0% |
| TCCTTTGCTTCTCAAAGTGA+AGG | - | chr1_2:58180024-58180043 | Msa0080020:CDS | 40.0% | |
| ! | ACCTTCACTTTGAGAAGCAA+AGG | + | chr1_2:58180028-58180047 | None:intergenic | 40.0% |
| AAAAGACATGGGATCTTGGA+CGG | - | chr1_2:58180068-58180087 | Msa0080020:CDS | 40.0% | |
| GTGGAGCTTTCGAAAACATT+AGG | - | chr1_2:58180199-58180218 | Msa0080020:CDS | 40.0% | |
| GTTTGCAAAATTGTGCTGTG+TGG | - | chr1_2:58180221-58180240 | Msa0080020:CDS | 40.0% | |
| TCACTCATGAATTGAACGCA+AGG | - | chr1_2:58180275-58180294 | Msa0080020:CDS | 40.0% | |
| ACGTAACATTGGCATTCGAA+TGG | + | chr1_2:58180440-58180459 | None:intergenic | 40.0% | |
| !! | TCAGGCTTGTTATGCCATAT+TGG | - | chr1_2:58180495-58180514 | Msa0080020:CDS | 40.0% |
| CGGAAGAATCAAGACCAATA+TGG | + | chr1_2:58180512-58180531 | None:intergenic | 40.0% | |
| TCAGGAGCTGGAGATAATTA+AGG | - | chr1_2:58180558-58180577 | Msa0080020:intron | 40.0% | |
| AATTAAGGTGGTTGCTGATC+AGG | - | chr1_2:58180573-58180592 | Msa0080020:intron | 40.0% | |
| ! | TCTGAAATGAGTTTCTTGCC+TGG | + | chr1_2:58180714-58180733 | None:intergenic | 40.0% |
| AAGTCATGAGTGATGGTATG+AGG | - | chr1_2:58180734-58180753 | Msa0080020:intron | 40.0% | |
| AATCCCAAAATCGAGTGCAT+AGG | + | chr1_2:58180763-58180782 | None:intergenic | 40.0% | |
| !! | GGATGATGGAAGATTTCCTT+TGG | - | chr1_2:58180903-58180922 | Msa0080020:intron | 40.0% |
| CCAAAAGACCTTATCTCCAA+AGG | + | chr1_2:58180922-58180941 | None:intergenic | 40.0% | |
| !! | CCTTTGGAGATAAGGTCTTT+TGG | - | chr1_2:58180919-58180938 | Msa0080020:intron | 40.0% |
| AAACACACATGCATTTGGCA+AGG | + | chr1_2:58180975-58180994 | None:intergenic | 40.0% | |
| CATGTGTGTTTATAAGGGCT+TGG | - | chr1_2:58180984-58181003 | Msa0080020:intron | 40.0% | |
| ! | TTATAAGGGCTTGGGTTTTG+TGG | - | chr1_2:58180993-58181012 | Msa0080020:intron | 40.0% |
| TCATCACCCATAACATGGTT+TGG | + | chr1_2:58181039-58181058 | None:intergenic | 40.0% | |
| ! | CAGGTGATTTTGCATATGGT+TGG | - | chr1_2:58181072-58181091 | Msa0080020:intron | 40.0% |
| TCTACTGGATTGTAACCATG+GGG | - | chr1_2:58181098-58181117 | Msa0080020:intron | 40.0% | |
| AGTCAAGGGAGGAATGAAAA+AGG | - | chr1_2:58181162-58181181 | Msa0080020:CDS | 40.0% | |
| AAGGGAGGAATGAAAAAGGA+TGG | - | chr1_2:58181166-58181185 | Msa0080020:CDS | 40.0% | |
| AGGGAGGAATGAAAAAGGAT+GGG | - | chr1_2:58181167-58181186 | Msa0080020:CDS | 40.0% | |
| TATTTGCAAGAGGATAGTCC+AGG | - | chr1_2:58181343-58181362 | Msa0080020:CDS | 40.0% | |
| TCCCATCATAAGAGCAAATC+TGG | - | chr1_2:58181669-58181688 | Msa0080020:CDS | 40.0% | |
| TAACAGTACAACGCATAGCT+TGG | + | chr1_2:58181806-58181825 | None:intergenic | 40.0% | |
| GATGCAAGGAAACTTATGGT+TGG | - | chr1_2:58181912-58181931 | Msa0080020:CDS | 40.0% | |
| ! | TGGTTGGTACCATATACTCA+CGG | - | chr1_2:58181928-58181947 | Msa0080020:CDS | 40.0% |
| TGAGGAATACCGTGAGTATA+TGG | + | chr1_2:58181940-58181959 | None:intergenic | 40.0% | |
| !! | AGAAGAAGTGTCATGCTTTG+AGG | + | chr1_2:58181958-58181977 | None:intergenic | 40.0% |
| TTCAGAGATGGCTATTGCAA+TGG | + | chr1_2:58182001-58182020 | None:intergenic | 40.0% | |
| CAGACCTCTCAACATTGAAT+TGG | + | chr1_2:58182052-58182071 | None:intergenic | 40.0% | |
| ACTTGAATGGAAGATCCAAC+AGG | + | chr1_2:58182195-58182214 | None:intergenic | 40.0% | |
| CTCCAAATGCCTGATATAGA+TGG | - | chr1_2:58182228-58182247 | Msa0080020:CDS | 40.0% | |
| GCAGTCAAGGCAACAATTAT+AGG | + | chr1_2:58182300-58182319 | None:intergenic | 40.0% | |
| CAAGTGCAGAAGAAGATTTG+TGG | - | chr1_2:58182319-58182338 | Msa0080020:CDS | 40.0% | |
| TGGGAAAGATGTATGCAGAT+TGG | - | chr1_2:58182339-58182358 | Msa0080020:CDS | 40.0% | |
| !! | CTTGCATCAAAACCGGTTTT+CGG | + | chr1_2:58182380-58182399 | None:intergenic | 40.0% |
| GCAATTCCTTGCATCAAAAC+CGG | + | chr1_2:58182387-58182406 | None:intergenic | 40.0% | |
| ! | TACGTGGAAAATTGGTAGCA+AGG | + | chr1_2:58182567-58182586 | None:intergenic | 40.0% |
| GACATCTCTACGTGGAAAAT+TGG | + | chr1_2:58182575-58182594 | None:intergenic | 40.0% | |
| CTCAAGAGGGATTGAGAAGT+AGG | + | chr1_2:58179795-58179814 | None:intergenic | 45.0% | |
| CTCGAACGTCCCTTTCAAAT+GGG | - | chr1_2:58179835-58179854 | Msa0080020:three_prime_UTR | 45.0% | |
| TGCTTCTCAAAGTGAAGGTC+AGG | - | chr1_2:58180029-58180048 | Msa0080020:CDS | 45.0% | |
| GCTTCTCAAAGTGAAGGTCA+GGG | - | chr1_2:58180030-58180049 | Msa0080020:CDS | 45.0% | |
| AAAGACATGGGATCTTGGAC+GGG | - | chr1_2:58180069-58180088 | Msa0080020:CDS | 45.0% | |
| GTCACTAGAAACACCAAGAC+TGG | + | chr1_2:58180401-58180420 | None:intergenic | 45.0% | |
| TAACAAGCCTGAGTTAGCTC+AGG | + | chr1_2:58180487-58180506 | None:intergenic | 45.0% | |
| GCTCCAAGATCTAGGTTCTT+CGG | + | chr1_2:58180536-58180555 | None:intergenic | 45.0% | |
| ACCTAGATCTTGGAGCAATC+AGG | - | chr1_2:58180540-58180559 | Msa0080020:intron | 45.0% | |
| TCCTGATTGCTCCAAGATCT+AGG | + | chr1_2:58180544-58180563 | None:intergenic | 45.0% | |
| GGAGCTGGAGATAATTAAGG+TGG | - | chr1_2:58180561-58180580 | Msa0080020:intron | 45.0% | |
| TCATGAGTGATGGTATGAGG+AGG | - | chr1_2:58180737-58180756 | Msa0080020:intron | 45.0% | |
| ! | AGGCCTATGCACTCGATTTT+GGG | - | chr1_2:58180757-58180776 | Msa0080020:intron | 45.0% |
| ! | GCACGCTGCTTCTTTTATCA+TGG | + | chr1_2:58180953-58180972 | None:intergenic | 45.0% |
| ACCATGTTATGGGTGATGAG+AGG | - | chr1_2:58181040-58181059 | Msa0080020:intron | 45.0% | |
| TCCTCTCATCACCCATAACA+TGG | + | chr1_2:58181044-58181063 | None:intergenic | 45.0% | |
| ATGTTATGGGTGATGAGAGG+AGG | - | chr1_2:58181043-58181062 | Msa0080020:intron | 45.0% | |
| TGTTATGGGTGATGAGAGGA+GGG | - | chr1_2:58181044-58181063 | Msa0080020:intron | 45.0% | |
| ! | TGATGAGAGGAGGGTTTTTC+AGG | - | chr1_2:58181053-58181072 | Msa0080020:intron | 45.0% |
| GCATATGGTTGGGAATCTAC+TGG | - | chr1_2:58181083-58181102 | Msa0080020:intron | 45.0% | |
| TGGATTGTAACCATGGGGAA+GGG | - | chr1_2:58181103-58181122 | Msa0080020:intron | 45.0% | |
| CTGCCGAAACTCGAAATACT+AGG | + | chr1_2:58181134-58181153 | None:intergenic | 45.0% | |
| ATGAAAAAGGATGGGCAACC+TGG | - | chr1_2:58181175-58181194 | Msa0080020:CDS | 45.0% | |
| ACATCACCACTAGATGAGCT+TGG | + | chr1_2:58181204-58181223 | None:intergenic | 45.0% | |
| TCTGCCCTCATATCTATCAC+TGG | + | chr1_2:58181312-58181331 | None:intergenic | 45.0% | |
| GAGATGGCTATTGCAATGGA+AGG | + | chr1_2:58181997-58182016 | None:intergenic | 45.0% | |
| GCATTCAAATCCCGTAGAAG+CGG | + | chr1_2:58182157-58182176 | None:intergenic | 45.0% | |
| CAACAGGTCCAATGACAGTA+AGG | + | chr1_2:58182179-58182198 | None:intergenic | 45.0% | |
| CTTACTGTCATTGGACCTGT+TGG | - | chr1_2:58182177-58182196 | Msa0080020:CDS | 45.0% | |
| TTCTTCTGCACTTGCAGTCA+AGG | + | chr1_2:58182313-58182332 | None:intergenic | 45.0% | |
| !! | CGAAAACCGGTTTTGATGCA+AGG | - | chr1_2:58182378-58182397 | Msa0080020:CDS | 45.0% |
| GCTCGAACGTCCCTTTCAAA+TGG | - | chr1_2:58179834-58179853 | Msa0080020:three_prime_UTR | 50.0% | |
| !! | CTTGGTGTTTCTAGTGACGC+AGG | - | chr1_2:58180403-58180422 | Msa0080020:CDS | 50.0% |
| !! | TGTTTCTAGTGACGCAGGAC+CGG | - | chr1_2:58180408-58180427 | Msa0080020:CDS | 50.0% |
| AGGAACACCTGAGCTAACTC+AGG | - | chr1_2:58180477-58180496 | Msa0080020:CDS | 50.0% | |
| CAAGATCTAGGTTCTTCGGC+CGG | + | chr1_2:58180532-58180551 | None:intergenic | 50.0% | |
| ATCTTGGAGCAATCAGGAGC+TGG | - | chr1_2:58180546-58180565 | Msa0080020:intron | 50.0% | |
| GGCGAGAAGGAATGCTATGA+TGG | - | chr1_2:58180684-58180703 | Msa0080020:intron | 50.0% | |
| GAATGCTATGATGGCAAGCC+AGG | - | chr1_2:58180693-58180712 | Msa0080020:intron | 50.0% | |
| ! | GAGGCCTATGCACTCGATTT+TGG | - | chr1_2:58180756-58180775 | Msa0080020:intron | 50.0% |
| ATCCTTTGCAGAGCTGTCCA+TGG | + | chr1_2:58180887-58180906 | None:intergenic | 50.0% | |
| GACAGCTCTGCAAAGGATGA+TGG | - | chr1_2:58180889-58180908 | Msa0080020:intron | 50.0% | |
| CTGGATTGTAACCATGGGGA+AGG | - | chr1_2:58181102-58181121 | Msa0080020:intron | 50.0% | |
| GGATTGTAACCATGGGGAAG+GGG | - | chr1_2:58181104-58181123 | Msa0080020:intron | 50.0% | |
| GATTGTAACCATGGGGAAGG+GGG | - | chr1_2:58181105-58181124 | Msa0080020:intron | 50.0% | |
| ATTGTAACCATGGGGAAGGG+GGG | - | chr1_2:58181106-58181125 | Msa0080020:intron | 50.0% | |
| ACTAGATGAGCTTGGTCTCC+AGG | + | chr1_2:58181196-58181215 | None:intergenic | 50.0% | |
| TGGAGACCAAGCTCATCTAG+TGG | - | chr1_2:58181195-58181214 | Msa0080020:CDS | 50.0% | |
| ACTGGTATATGTCCTACCCC+GGG | + | chr1_2:58181294-58181313 | None:intergenic | 50.0% | |
| CACTGGTATATGTCCTACCC+CGG | + | chr1_2:58181295-58181314 | None:intergenic | 50.0% | |
| GCAATAGCCATCTCTGAACC+CGG | - | chr1_2:58182003-58182022 | Msa0080020:CDS | 50.0% | |
| CAATAGCCATCTCTGAACCC+GGG | - | chr1_2:58182004-58182023 | Msa0080020:CDS | 50.0% | |
| AATAGCCATCTCTGAACCCG+GGG | - | chr1_2:58182005-58182024 | Msa0080020:CDS | 50.0% | |
| !! | TTGCGTTCTGAAGATTCCCC+GGG | + | chr1_2:58182024-58182043 | None:intergenic | 50.0% |
| !! | GTTGCGTTCTGAAGATTCCC+CGG | + | chr1_2:58182025-58182044 | None:intergenic | 50.0% |
| GAGAGGTCTGCAAGTTCTGT+TGG | - | chr1_2:58182062-58182081 | Msa0080020:CDS | 50.0% | |
| TTCCGTGACTTCCGCTTCTA+CGG | - | chr1_2:58182143-58182162 | Msa0080020:CDS | 50.0% | |
| CGCAGTTGCACAAGACACCA+AGG | + | chr1_2:58179984-58180003 | None:intergenic | 55.0% | |
| !! | GCGCTTGCTGTTTCCAGTCT+TGG | - | chr1_2:58180385-58180404 | Msa0080020:CDS | 55.0% |
| GGCATTCGAATGGCAGCAAC+CGG | + | chr1_2:58180430-58180449 | None:intergenic | 55.0% | |
| CGGCCGAAGAACCTAGATCT+TGG | - | chr1_2:58180530-58180549 | Msa0080020:intron | 55.0% | |
| TGCAGCATGCGATAGAGCCA+CGG | + | chr1_2:58180602-58180621 | None:intergenic | 55.0% | |
| GCGCAATCGAGCTTTGCAAC+TGG | - | chr1_2:58180663-58180682 | Msa0080020:intron | 55.0% | |
| GAGCTTTGCAACTGGCGAGA+AGG | - | chr1_2:58180671-58180690 | Msa0080020:intron | 55.0% | |
| TGCCATGGACAGCTCTGCAA+AGG | - | chr1_2:58180882-58180901 | Msa0080020:intron | 55.0% | |
| !! | GGGCTTGGGTTTTGTGGTTG+AGG | - | chr1_2:58180999-58181018 | Msa0080020:intron | 55.0% |
| !! | TTTCGAGTTTCGGCAGACGC+TGG | - | chr1_2:58181138-58181157 | Msa0080020:intron | 55.0% |
| AGATTCCCCGGGTTCAGAGA+TGG | + | chr1_2:58182013-58182032 | None:intergenic | 55.0% | |
| TCCGTGACTTCCGCTTCTAC+GGG | - | chr1_2:58182144-58182163 | Msa0080020:CDS | 55.0% | |
| TCCCGTAGAAGCGGAAGTCA+CGG | + | chr1_2:58182148-58182167 | None:intergenic | 55.0% | |
| ATGGATTCGAAGTCGCCGCA+AGG | - | chr1_2:58182247-58182266 | Msa0080020:CDS | 55.0% | |
| TCGAAGTCGCCGCAAGGATT+CGG | - | chr1_2:58182253-58182272 | Msa0080020:CDS | 55.0% | |
| GACATGGGATCTTGGACGGG+AGG | - | chr1_2:58180072-58180091 | Msa0080020:CDS | 60.0% | |
| TGGGATCTTGGACGGGAGGT+TGG | - | chr1_2:58180076-58180095 | Msa0080020:CDS | 60.0% | |
| ! | GGTTGCTGATCAGGTTGCCG+TGG | - | chr1_2:58180582-58180601 | Msa0080020:intron | 60.0% |
| TCGGCAGACGCTGGAAGTCA+AGG | - | chr1_2:58181147-58181166 | Msa0080020:intron | 60.0% | |
| CGGCAGACGCTGGAAGTCAA+GGG | - | chr1_2:58181148-58181167 | Msa0080020:intron | 60.0% | |
| CAGACGCTGGAAGTCAAGGG+AGG | - | chr1_2:58181151-58181170 | Msa0080020:intron | 60.0% | |
| GTTGGCAGCTCAGTGTCCTC+AGG | - | chr1_2:58181267-58181286 | Msa0080020:CDS | 60.0% | |
| AGCTCAGTGTCCTCAGGTCC+CGG | - | chr1_2:58181273-58181292 | Msa0080020:CDS | 60.0% | |
| CTAGGATCCCCCCTTCCCCA+TGG | + | chr1_2:58181116-58181135 | None:intergenic | 65.0% | |
| GCTCAGTGTCCTCAGGTCCC+GGG | - | chr1_2:58181274-58181293 | Msa0080020:CDS | 65.0% | |
| CTCAGTGTCCTCAGGTCCCG+GGG | - | chr1_2:58181275-58181294 | Msa0080020:CDS | 65.0% | |
| ATGTCCTACCCCGGGACCTG+AGG | + | chr1_2:58181286-58181305 | None:intergenic | 65.0% | |
| GTGTCCTCAGGTCCCGGGGT+AGG | - | chr1_2:58181279-58181298 | Msa0080020:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 58179623 | 58182830 | 58179623 | ID=Msa0080020;Name=Msa0080020 |
| chr1_2 | mRNA | 58179623 | 58182830 | 58179623 | ID=Msa0080020-mRNA-1;Parent=Msa0080020;Name=Msa0080020-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0.5|1|1|1|2|384|736 |
| chr1_2 | exon | 58179623 | 58180543 | 58179623 | ID=Msa0080020-mRNA-1:exon:18564;Parent=Msa0080020-mRNA-1 |
| chr1_2 | exon | 58181157 | 58182830 | 58181157 | ID=Msa0080020-mRNA-1:exon:18563;Parent=Msa0080020-mRNA-1 |
| chr1_2 | CDS | 58181157 | 58182830 | 58181157 | ID=Msa0080020-mRNA-1:cds;Parent=Msa0080020-mRNA-1 |
| chr1_2 | CDS | 58180007 | 58180543 | 58180007 | ID=Msa0080020-mRNA-1:cds;Parent=Msa0080020-mRNA-1 |
| chr1_2 | three_prime_UTR | 58179623 | 58180006 | 58179623 | ID=Msa0080020-mRNA-1:three_prime_utr;Parent=Msa0080020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
