Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0376600 | XP_039687607.1 | 98.263 | 403 | 7 | 0 | 1 | 403 | 1 | 403 | 0.0 | 821 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0376600 | sp|D2K8N5|TAP46_NICBE | 71.782 | 404 | 112 | 2 | 1 | 403 | 1 | 403 | 0.0 | 596 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0376600 | G7J7F3 | 98.020 | 404 | 7 | 1 | 1 | 403 | 1 | 404 | 0.0 | 816 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0009100 | Msa0376600 | 0.811421 | 7.060203e-51 | -8.615850e-47 |
Msa0010770 | Msa0376600 | 0.803947 | 2.733764e-49 | -8.615850e-47 |
Msa0012710 | Msa0376600 | 0.805072 | 1.592917e-49 | -8.615850e-47 |
Msa0014830 | Msa0376600 | 0.815168 | 1.061253e-51 | -8.615850e-47 |
Msa0015090 | Msa0376600 | 0.831118 | 2.000633e-55 | -8.615850e-47 |
Msa0016510 | Msa0376600 | 0.871387 | 7.105910e-67 | -8.615850e-47 |
Msa0017320 | Msa0376600 | 0.823342 | 1.458613e-53 | -8.615850e-47 |
Msa0026910 | Msa0376600 | 0.816330 | 5.847595e-52 | -8.615850e-47 |
Msa0030300 | Msa0376600 | 0.836515 | 8.945067e-57 | -8.615850e-47 |
Msa0047250 | Msa0376600 | 0.813433 | 2.566234e-51 | -8.615850e-47 |
Msa0049750 | Msa0376600 | 0.838327 | 3.071077e-57 | -8.615850e-47 |
Msa0051630 | Msa0376600 | 0.813730 | 2.207526e-51 | -8.615850e-47 |
Msa0051740 | Msa0376600 | 0.824249 | 8.940800e-54 | -8.615850e-47 |
Msa0051750 | Msa0376600 | 0.811580 | 6.520141e-51 | -8.615850e-47 |
Msa0052860 | Msa0376600 | 0.807026 | 6.178273e-50 | -8.615850e-47 |
Msa0055070 | Msa0376600 | 0.806034 | 1.000845e-49 | -8.615850e-47 |
Msa0059890 | Msa0376600 | 0.809979 | 1.447737e-50 | -8.615850e-47 |
Msa0071250 | Msa0376600 | 0.814411 | 1.561577e-51 | -8.615850e-47 |
Msa0074750 | Msa0376600 | 0.902620 | 8.046634e-79 | -8.615850e-47 |
Msa0077900 | Msa0376600 | 0.836403 | 9.552405e-57 | -8.615850e-47 |
Msa0079230 | Msa0376600 | 0.823524 | 1.322682e-53 | -8.615850e-47 |
Msa0079920 | Msa0376600 | 0.801995 | 6.921352e-49 | -8.615850e-47 |
Msa0081650 | Msa0376600 | 0.828218 | 1.016054e-54 | -8.615850e-47 |
Msa0081940 | Msa0376600 | 0.813916 | 2.008726e-51 | -8.615850e-47 |
Msa0082050 | Msa0376600 | 0.803553 | 3.299292e-49 | -8.615850e-47 |
Msa0084430 | Msa0376600 | 0.809996 | 1.435631e-50 | -8.615850e-47 |
Msa0090550 | Msa0376600 | 0.843181 | 1.640591e-58 | -8.615850e-47 |
Msa0092170 | Msa0376600 | 0.805911 | 1.062276e-49 | -8.615850e-47 |
Msa0093010 | Msa0376600 | 0.811634 | 6.345748e-51 | -8.615850e-47 |
Msa0095770 | Msa0376600 | 0.811953 | 5.409163e-51 | -8.615850e-47 |
Msa0096700 | Msa0376600 | 0.845433 | 4.073448e-59 | -8.615850e-47 |
Msa0098930 | Msa0376600 | 0.812445 | 4.223652e-51 | -8.615850e-47 |
Msa0098990 | Msa0376600 | 0.840143 | 1.038098e-57 | -8.615850e-47 |
Msa0101020 | Msa0376600 | 0.811050 | 8.498319e-51 | -8.615850e-47 |
Msa0103790 | Msa0376600 | 0.808439 | 3.095371e-50 | -8.615850e-47 |
Msa0111080 | Msa0376600 | 0.824472 | 7.923085e-54 | -8.615850e-47 |
Msa0126880 | Msa0376600 | 0.813103 | 3.032171e-51 | -8.615850e-47 |
Msa0128430 | Msa0376600 | 0.807417 | 5.105905e-50 | -8.615850e-47 |
Msa0131700 | Msa0376600 | 0.812241 | 4.679960e-51 | -8.615850e-47 |
Msa0136120 | Msa0376600 | 0.801474 | 8.850975e-49 | -8.615850e-47 |
Msa0137510 | Msa0376600 | 0.824100 | 9.690548e-54 | -8.615850e-47 |
Msa0138210 | Msa0376600 | 0.830859 | 2.316547e-55 | -8.615850e-47 |
Msa0139670 | Msa0376600 | 0.848649 | 5.359137e-60 | -8.615850e-47 |
Msa0142500 | Msa0376600 | 0.839362 | 1.658406e-57 | -8.615850e-47 |
Msa0145110 | Msa0376600 | 0.807797 | 4.241332e-50 | -8.615850e-47 |
Msa0146080 | Msa0376600 | 0.847448 | 1.148914e-59 | -8.615850e-47 |
Msa0149440 | Msa0376600 | 0.807190 | 5.705695e-50 | -8.615850e-47 |
Msa0154920 | Msa0376600 | 0.819027 | 1.440419e-52 | -8.615850e-47 |
Msa0171870 | Msa0376600 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
Msa0171980 | Msa0376600 | 0.853230 | 2.740644e-61 | -8.615850e-47 |
Msa0176030 | Msa0376600 | 0.801605 | 8.320321e-49 | -8.615850e-47 |
Msa0183420 | Msa0376600 | 0.818104 | 2.332663e-52 | -8.615850e-47 |
Msa0183870 | Msa0376600 | 0.848325 | 6.587057e-60 | -8.615850e-47 |
Msa0187490 | Msa0376600 | 0.842985 | 1.850699e-58 | -8.615850e-47 |
Msa0190250 | Msa0376600 | 0.802562 | 5.288214e-49 | -8.615850e-47 |
Msa0191070 | Msa0376600 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
Msa0194080 | Msa0376600 | 0.818220 | 2.196038e-52 | -8.615850e-47 |
Msa0194800 | Msa0376600 | 0.803086 | 4.122399e-49 | -8.615850e-47 |
Msa0197610 | Msa0376600 | 0.841466 | 4.672150e-58 | -8.615850e-47 |
Msa0200650 | Msa0376600 | 0.833526 | 5.069383e-56 | -8.615850e-47 |
Msa0202930 | Msa0376600 | 0.835590 | 1.535416e-56 | -8.615850e-47 |
Msa0207030 | Msa0376600 | 0.814490 | 1.500701e-51 | -8.615850e-47 |
Msa0210260 | Msa0376600 | 0.836837 | 7.402898e-57 | -8.615850e-47 |
Msa0233370 | Msa0376600 | 0.837122 | 6.261834e-57 | -8.615850e-47 |
Msa0235940 | Msa0376600 | 0.816432 | 5.548170e-52 | -8.615850e-47 |
Msa0376020 | Msa0376600 | 0.821588 | 3.728263e-53 | -8.615850e-47 |
Msa0376600 | Msa0379260 | 0.813399 | 2.610777e-51 | -8.615850e-47 |
Msa0376600 | Msa0381000 | 0.802755 | 4.825620e-49 | -8.615850e-47 |
Msa0376600 | Msa0382310 | 0.812003 | 5.274157e-51 | -8.615850e-47 |
Msa0376600 | Msa0382370 | 0.813884 | 2.042003e-51 | -8.615850e-47 |
Msa0376600 | Msa0382680 | 0.831864 | 1.310924e-55 | -8.615850e-47 |
Msa0376600 | Msa0387050 | 0.842046 | 3.283026e-58 | -8.615850e-47 |
Msa0376600 | Msa0388650 | 0.804799 | 1.816268e-49 | -8.615850e-47 |
Msa0376600 | Msa0388730 | 0.801227 | 9.943526e-49 | -8.615850e-47 |
Msa0376600 | Msa0390480 | 0.822394 | 2.425338e-53 | -8.615850e-47 |
Msa0376600 | Msa0392270 | 0.811224 | 7.792058e-51 | -8.615850e-47 |
Msa0376600 | Msa0395980 | 0.822437 | 2.370421e-53 | -8.615850e-47 |
Msa0376600 | Msa0403490 | 0.848235 | 6.972796e-60 | -8.615850e-47 |
Msa0376600 | Msa0403770 | 0.837355 | 5.458659e-57 | -8.615850e-47 |
Msa0376600 | Msa0408390 | 0.811021 | 8.622027e-51 | -8.615850e-47 |
Msa0376600 | Msa0416460 | 0.834747 | 2.506537e-56 | -8.615850e-47 |
Msa0376600 | Msa0422180 | 0.825801 | 3.845535e-54 | -8.615850e-47 |
Msa0376600 | Msa0427580 | 0.814156 | 1.778480e-51 | -8.615850e-47 |
Msa0376600 | Msa0431210 | 0.836318 | 1.003634e-56 | -8.615850e-47 |
Msa0376600 | Msa0432160 | 0.808365 | 3.210435e-50 | -8.615850e-47 |
Msa0376600 | Msa0432500 | 0.805875 | 1.080779e-49 | -8.615850e-47 |
Msa0376600 | Msa0436190 | 0.803924 | 2.763584e-49 | -8.615850e-47 |
Msa0376600 | Msa0439890 | 0.844452 | 7.494593e-59 | -8.615850e-47 |
Msa0376600 | Msa0440510 | 0.809785 | 1.593329e-50 | -8.615850e-47 |
Msa0376600 | Msa0443430 | 0.845360 | 4.263243e-59 | -8.615850e-47 |
Msa0376600 | Msa0476680 | 0.805928 | 1.053457e-49 | -8.615850e-47 |
Msa0376600 | Msa0481280 | 0.809269 | 2.056796e-50 | -8.615850e-47 |
Msa0376600 | Msa0482040 | 0.835754 | 1.395643e-56 | -8.615850e-47 |
Msa0376600 | Msa0482940 | 0.859314 | 4.507469e-63 | -8.615850e-47 |
Msa0376600 | Msa0489660 | 0.847574 | 1.060707e-59 | -8.615850e-47 |
Msa0376600 | Msa0491000 | 0.823137 | 1.628498e-53 | -8.615850e-47 |
Msa0376600 | Msa0502090 | 0.804983 | 1.662159e-49 | -8.615850e-47 |
Msa0376600 | Msa0514610 | 0.840777 | 7.088229e-58 | -8.615850e-47 |
Msa0376600 | Msa0516020 | 0.820592 | 6.324141e-53 | -8.615850e-47 |
Msa0376600 | Msa0516120 | 0.800830 | 1.198694e-48 | -8.615850e-47 |
Msa0376600 | Msa0516240 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
Msa0376600 | Msa0518170 | 0.828598 | 8.224813e-55 | -8.615850e-47 |
Msa0376600 | Msa0518440 | 0.800103 | 1.686364e-48 | -8.615850e-47 |
Msa0376600 | Msa0520270 | 0.813576 | 2.386294e-51 | -8.615850e-47 |
Msa0376600 | Msa0521010 | 0.804338 | 2.265982e-49 | -8.615850e-47 |
Msa0376600 | Msa0526020 | 0.812753 | 3.618088e-51 | -8.615850e-47 |
Msa0376600 | Msa0527740 | 0.832835 | 7.535639e-56 | -8.615850e-47 |
Msa0376600 | Msa0531220 | 0.807424 | 5.089294e-50 | -8.615850e-47 |
Msa0376600 | Msa0531250 | 0.809060 | 2.280291e-50 | -8.615850e-47 |
Msa0376600 | Msa0534410 | 0.824978 | 6.022256e-54 | -8.615850e-47 |
Msa0376600 | Msa0542560 | 0.814627 | 1.399310e-51 | -8.615850e-47 |
Msa0376600 | Msa0544170 | 0.817112 | 3.904831e-52 | -8.615850e-47 |
Msa0376600 | Msa0548930 | 0.802171 | 6.367733e-49 | -8.615850e-47 |
Msa0376600 | Msa0555640 | 0.820972 | 5.171723e-53 | -8.615850e-47 |
Msa0376600 | Msa0560500 | 0.845351 | 4.286733e-59 | -8.615850e-47 |
Msa0376600 | Msa0566350 | 0.874733 | 5.361053e-68 | -8.615850e-47 |
Msa0376600 | Msa0566750 | 0.862059 | 6.623892e-64 | -8.615850e-47 |
Msa0376600 | Msa0569780 | 0.832585 | 8.690955e-56 | -8.615850e-47 |
Msa0376600 | Msa0583670 | 0.803527 | 3.341221e-49 | -8.615850e-47 |
Msa0376600 | Msa0585070 | 0.808778 | 2.620320e-50 | -8.615850e-47 |
Msa0376600 | Msa0588090 | 0.806526 | 7.881657e-50 | -8.615850e-47 |
Msa0376600 | Msa0588120 | 0.804026 | 2.631876e-49 | -8.615850e-47 |
Msa0376600 | Msa0588240 | 0.803148 | 4.002960e-49 | -8.615850e-47 |
Msa0376600 | Msa0594200 | 0.818944 | 1.505019e-52 | -8.615850e-47 |
Msa0376600 | Msa0600080 | 0.831986 | 1.222557e-55 | -8.615850e-47 |
Msa0376600 | Msa0600450 | 0.845142 | 4.882835e-59 | -8.615850e-47 |
Msa0376600 | Msa0605510 | 0.807853 | 4.125279e-50 | -8.615850e-47 |
Msa0376600 | Msa0606080 | 0.827056 | 1.931302e-54 | -8.615850e-47 |
Msa0376600 | Msa0614510 | 0.806041 | 9.971881e-50 | -8.615850e-47 |
Msa0376600 | Msa0617260 | 0.825347 | 4.924738e-54 | -8.615850e-47 |
Msa0376600 | Msa0618950 | 0.830051 | 3.649902e-55 | -8.615850e-47 |
Msa0376600 | Msa0618970 | 0.822075 | 2.875434e-53 | -8.615850e-47 |
Msa0376600 | Msa0620330 | 0.865791 | 4.569857e-65 | -8.615850e-47 |
Msa0376600 | Msa0621600 | 0.823389 | 1.422211e-53 | -8.615850e-47 |
Msa0376600 | Msa0628400 | 0.808917 | 2.446440e-50 | -8.615850e-47 |
Msa0376600 | Msa0628420 | 0.801556 | 8.515528e-49 | -8.615850e-47 |
Msa0376600 | Msa0640940 | 0.844713 | 6.376273e-59 | -8.615850e-47 |
Msa0376600 | Msa0646470 | 0.812700 | 3.715838e-51 | -8.615850e-47 |
Msa0376600 | Msa0647030 | 0.819847 | 9.368998e-53 | -8.615850e-47 |
Msa0376600 | Msa0654620 | 0.804387 | 2.213210e-49 | -8.615850e-47 |
Msa0376600 | Msa0657120 | 0.801781 | 7.658686e-49 | -8.615850e-47 |
Msa0376600 | Msa0658680 | 0.815333 | 9.755742e-52 | -8.615850e-47 |
Msa0376600 | Msa0662630 | 0.835946 | 1.248177e-56 | -8.615850e-47 |
Msa0376600 | Msa0679360 | 0.838981 | 2.081736e-57 | -8.615850e-47 |
Msa0376600 | Msa0682680 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
Msa0376600 | Msa0689440 | 0.803612 | 3.208679e-49 | -8.615850e-47 |
Msa0376600 | Msa0697720 | 0.835570 | 1.553547e-56 | -8.615850e-47 |
Msa0376600 | Msa0698440 | 0.820574 | 6.383378e-53 | -8.615850e-47 |
Msa0376600 | Msa0701100 | 0.837190 | 6.017276e-57 | -8.615850e-47 |
Msa0376600 | Msa0703440 | 0.822089 | 2.854251e-53 | -8.615850e-47 |
Msa0376600 | Msa0705390 | 0.838803 | 2.314072e-57 | -8.615850e-47 |
Msa0376600 | Msa0705990 | 0.842344 | 2.738469e-58 | -8.615850e-47 |
Msa0376600 | Msa0707010 | 0.826776 | 2.253680e-54 | -8.615850e-47 |
Msa0376600 | Msa0709120 | 0.849176 | 3.824464e-60 | -8.615850e-47 |
Msa0376600 | Msa0709160 | 0.830140 | 3.473049e-55 | -8.615850e-47 |
Msa0376600 | Msa0721340 | 0.811911 | 5.523108e-51 | -8.615850e-47 |
Msa0376600 | Msa0726080 | 0.853457 | 2.359535e-61 | -8.615850e-47 |
Msa0376600 | Msa0727530 | 0.804608 | 1.991135e-49 | -8.615850e-47 |
Msa0376600 | Msa0732600 | 0.826127 | 3.217720e-54 | -8.615850e-47 |
Msa0376600 | Msa0741070 | 0.802743 | 4.854594e-49 | -8.615850e-47 |
Msa0376600 | Msa0743530 | 0.849913 | 2.382623e-60 | -8.615850e-47 |
Msa0376600 | Msa0746170 | 0.815759 | 7.841169e-52 | -8.615850e-47 |
Msa0376600 | Msa0746210 | 0.806590 | 7.639466e-50 | -8.615850e-47 |
Msa0376600 | Msa0750810 | 0.812375 | 4.376185e-51 | -8.615850e-47 |
Msa0376600 | Msa0763920 | 0.804109 | 2.529159e-49 | -8.615850e-47 |
Msa0376600 | Msa0764920 | 0.842293 | 2.824529e-58 | -8.615850e-47 |
Msa0376600 | Msa0765180 | 0.839813 | 1.265499e-57 | -8.615850e-47 |
Msa0376600 | Msa0773590 | 0.809260 | 2.065587e-50 | -8.615850e-47 |
Msa0376600 | Msa0775560 | 0.803357 | 3.623978e-49 | -8.615850e-47 |
Msa0376600 | Msa0776750 | 0.804088 | 2.555231e-49 | -8.615850e-47 |
Msa0376600 | Msa0787150 | 0.817400 | 3.362746e-52 | -8.615850e-47 |
Msa0376600 | Msa0789560 | 0.840560 | 8.078452e-58 | -8.615850e-47 |
Msa0376600 | Msa0794210 | 0.801534 | 8.606118e-49 | -8.615850e-47 |
Msa0376600 | Msa0805420 | 0.834891 | 2.305191e-56 | -8.615850e-47 |
Msa0376600 | Msa0811040 | 0.821218 | 4.538812e-53 | -8.615850e-47 |
Msa0376600 | Msa0812950 | 0.845671 | 3.511353e-59 | -8.615850e-47 |
Msa0376600 | Msa0817120 | 0.816789 | 4.614239e-52 | -8.615850e-47 |
Msa0376600 | Msa0820200 | 0.829477 | 5.036230e-55 | -8.615850e-47 |
Msa0376600 | Msa0822170 | 0.826791 | 2.235028e-54 | -8.615850e-47 |
Msa0376600 | Msa0838370 | 0.802569 | 5.272427e-49 | -8.615850e-47 |
Msa0376600 | Msa0842770 | 0.847311 | 1.253100e-59 | -8.615850e-47 |
Msa0376600 | Msa0844280 | 0.842849 | 2.011527e-58 | -8.615850e-47 |
Msa0376600 | Msa0844610 | 0.841570 | 4.386012e-58 | -8.615850e-47 |
Msa0376600 | Msa0846230 | 0.858228 | 9.514459e-63 | -8.615850e-47 |
Msa0376600 | Msa0847470 | 0.805758 | 1.143792e-49 | -8.615850e-47 |
Msa0376600 | Msa0858440 | 0.802992 | 4.311639e-49 | -8.615850e-47 |
Msa0376600 | Msa0877710 | 0.853822 | 1.852810e-61 | -8.615850e-47 |
Msa0376600 | Msa0879860 | 0.800988 | 1.112947e-48 | -8.615850e-47 |
Msa0376600 | Msa0880810 | 0.827205 | 1.779274e-54 | -8.615850e-47 |
Msa0376600 | Msa0905750 | 0.817030 | 4.072669e-52 | -8.615850e-47 |
Msa0376600 | Msa0934840 | 0.826196 | 3.097322e-54 | -8.615850e-47 |
Msa0376600 | Msa0947800 | 0.817579 | 3.064980e-52 | -8.615850e-47 |
Msa0376600 | Msa0957870 | 0.804996 | 1.652066e-49 | -8.615850e-47 |
Msa0376600 | Msa0958030 | 0.816260 | 6.059954e-52 | -8.615850e-47 |
Msa0376600 | Msa0970530 | 0.811104 | 8.271725e-51 | -8.615850e-47 |
Msa0376600 | Msa0970600 | 0.832044 | 1.183302e-55 | -8.615850e-47 |
Msa0376600 | Msa0971850 | 0.808506 | 2.995488e-50 | -8.615850e-47 |
Msa0376600 | Msa0992580 | 0.820317 | 7.311397e-53 | -8.615850e-47 |
Msa0376600 | Msa0992600 | 0.831618 | 1.507128e-55 | -8.615850e-47 |
Msa0376600 | Msa1007290 | 0.801056 | 1.077888e-48 | -8.615850e-47 |
Msa0376600 | Msa1010460 | 0.809649 | 1.704305e-50 | -8.615850e-47 |
Msa0376600 | Msa1024680 | 0.801594 | 8.364444e-49 | -8.615850e-47 |
Msa0376600 | Msa1026640 | 0.825560 | 4.385319e-54 | -8.615850e-47 |
Msa0376600 | Msa1034700 | 0.801894 | 7.260145e-49 | -8.615850e-47 |
Msa0376600 | Msa1036740 | 0.824527 | 7.689758e-54 | -8.615850e-47 |
Msa0376600 | Msa1037520 | 0.802459 | 5.553900e-49 | -8.615850e-47 |
Msa0376600 | Msa1042660 | 0.844452 | 7.494593e-59 | -8.615850e-47 |
Msa0376600 | Msa1048750 | -0.801910 | 7.204137e-49 | -8.615850e-47 |
Msa0376600 | Msa1063420 | 0.823660 | 1.229299e-53 | -8.615850e-47 |
Msa0376600 | Msa1066810 | 0.830621 | 2.649507e-55 | -8.615850e-47 |
Msa0376600 | Msa1071320 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
Msa0376600 | Msa1077070 | 0.843939 | 1.028872e-58 | -8.615850e-47 |
Msa0376600 | Msa1084270 | 0.897709 | 1.080303e-76 | -8.615850e-47 |
Msa0376600 | Msa1096550 | 0.820342 | 7.214814e-53 | -8.615850e-47 |
Msa0376600 | Msa1109780 | -0.818949 | 1.500527e-52 | -8.615850e-47 |
Msa0376600 | Msa1115280 | 0.815445 | 9.210968e-52 | -8.615850e-47 |
Msa0376600 | Msa1122780 | 0.850240 | 1.929128e-60 | -8.615850e-47 |
Msa0376600 | Msa1123350 | 0.803303 | 3.717755e-49 | -8.615850e-47 |
Msa0376600 | Msa1127430 | 0.879860 | 8.821458e-70 | -8.615850e-47 |
Msa0376600 | Msa1130400 | 0.815127 | 1.084051e-51 | -8.615850e-47 |
Msa0376600 | Msa1130530 | 0.802244 | 6.151102e-49 | -8.615850e-47 |
Msa0376600 | Msa1143020 | 0.829060 | 6.357319e-55 | -8.615850e-47 |
Msa0376600 | Msa1144040 | 0.810353 | 1.202095e-50 | -8.615850e-47 |
Msa0376600 | Msa1154490 | 0.808580 | 2.888041e-50 | -8.615850e-47 |
Msa0376600 | Msa1163870 | 0.857244 | 1.862193e-62 | -8.615850e-47 |
Msa0376600 | Msa1178580 | 0.849850 | 2.481212e-60 | -8.615850e-47 |
Msa0376600 | Msa1185460 | 0.814434 | 1.543968e-51 | -8.615850e-47 |
Msa0376600 | Msa1187590 | 0.806502 | 7.975381e-50 | -8.615850e-47 |
Msa0376600 | Msa1197070 | 0.803655 | 3.143231e-49 | -8.615850e-47 |
Msa0376600 | Msa1199710 | 0.804784 | 1.829186e-49 | -8.615850e-47 |
Msa0376600 | Msa1200320 | 0.812890 | 3.376101e-51 | -8.615850e-47 |
Msa0376600 | Msa1201640 | 0.809122 | 2.211934e-50 | -8.615850e-47 |
Msa0376600 | Msa1205480 | 0.838800 | 2.319284e-57 | -8.615850e-47 |
Msa0376600 | Msa1205590 | 0.853230 | 2.740644e-61 | -8.615850e-47 |
Msa0376600 | Msa1206100 | 0.819148 | 1.352011e-52 | -8.615850e-47 |
Msa0376600 | Msa1206650 | 0.832685 | 8.209832e-56 | -8.615850e-47 |
Msa0376600 | Msa1207350 | 0.827421 | 1.579465e-54 | -8.615850e-47 |
Msa0376600 | Msa1208370 | 0.813759 | 2.175338e-51 | -8.615850e-47 |
Msa0376600 | Msa1208380 | 0.830398 | 3.004026e-55 | -8.615850e-47 |
Msa0376600 | Msa1208790 | 0.808401 | 3.154356e-50 | -8.615850e-47 |
Msa0376600 | Msa1209190 | 0.848273 | 6.807156e-60 | -8.615850e-47 |
Msa0376600 | Msa1209670 | 0.845045 | 5.186480e-59 | -8.615850e-47 |
Msa0376600 | Msa1209860 | 0.848759 | 4.993070e-60 | -8.615850e-47 |
Msa0376600 | Msa1218580 | 0.825751 | 3.950607e-54 | -8.615850e-47 |
Msa0376600 | Msa1225600 | 0.824170 | 9.332905e-54 | -8.615850e-47 |
Msa0376600 | Msa1233850 | 0.872414 | 3.238177e-67 | -8.615850e-47 |
Msa0376600 | Msa1234620 | 0.836718 | 7.941816e-57 | -8.615850e-47 |
Msa0376600 | Msa1250110 | 0.843007 | 1.826006e-58 | -8.615850e-47 |
Msa0376600 | Msa1250730 | 0.838493 | 2.782602e-57 | -8.615850e-47 |
Msa0376600 | Msa1254620 | 0.805525 | 1.280129e-49 | -8.615850e-47 |
Msa0376600 | Msa1257070 | 0.804385 | 2.216287e-49 | -8.615850e-47 |
Msa0376600 | Msa1270660 | 0.830864 | 2.309304e-55 | -8.615850e-47 |
Msa0376600 | Msa1270730 | 0.837610 | 4.696841e-57 | -8.615850e-47 |
Msa0376600 | Msa1276150 | 0.847524 | 1.095267e-59 | -8.615850e-47 |
Msa0376600 | Msa1295330 | 0.803199 | 3.907700e-49 | -8.615850e-47 |
Msa0376600 | Msa1295930 | 0.806448 | 8.186320e-50 | -8.615850e-47 |
Msa0376600 | Msa1297530 | 0.832978 | 6.941205e-56 | -8.615850e-47 |
Msa0376600 | Msa1298100 | 0.855470 | 6.175685e-62 | -8.615850e-47 |
Msa0376600 | Msa1304810 | 0.825739 | 3.977403e-54 | -8.615850e-47 |
Msa0376600 | Msa1307180 | 0.807788 | 4.259672e-50 | -8.615850e-47 |
Msa0376600 | Msa1315750 | 0.817487 | 3.214743e-52 | -8.615850e-47 |
Msa0376600 | Msa1329550 | 0.822019 | 2.963724e-53 | -8.615850e-47 |
Msa0376600 | Msa1329800 | 0.812754 | 3.615792e-51 | -8.615850e-47 |
Msa0376600 | Msa1331280 | 0.814949 | 1.186977e-51 | -8.615850e-47 |
Msa0376600 | Msa1332050 | 0.806678 | 7.320316e-50 | -8.615850e-47 |
Msa0376600 | Msa1335230 | 0.804810 | 1.806665e-49 | -8.615850e-47 |
Msa0376600 | Msa1336040 | 0.859623 | 3.637818e-63 | -8.615850e-47 |
Msa0376600 | Msa1337170 | 0.814412 | 1.561182e-51 | -8.615850e-47 |
Msa0376600 | Msa1339190 | 0.847372 | 1.205523e-59 | -8.615850e-47 |
Msa0376600 | Msa1339320 | 0.807842 | 4.148186e-50 | -8.615850e-47 |
Msa0376600 | Msa1341490 | 0.821050 | 4.961014e-53 | -8.615850e-47 |
Msa0376600 | Msa1344660 | 0.828599 | 8.219052e-55 | -8.615850e-47 |
Msa0376600 | Msa1349450 | 0.815624 | 8.402019e-52 | -8.615850e-47 |
Msa0376600 | Msa1351550 | 0.816332 | 5.840013e-52 | -8.615850e-47 |
Msa0376600 | Msa1370590 | 0.860089 | 2.632715e-63 | -8.615850e-47 |
Msa0376600 | Msa1371240 | 0.802599 | 5.197290e-49 | -8.615850e-47 |
Msa0376600 | Msa1372290 | 0.836815 | 7.502155e-57 | -8.615850e-47 |
Msa0376600 | Msa1382020 | 0.837636 | 4.624424e-57 | -8.615850e-47 |
Msa0376600 | Msa1384100 | 0.861456 | 1.013063e-63 | -8.615850e-47 |
Msa0376600 | Msa1391720 | 0.811482 | 6.848649e-51 | -8.615850e-47 |
Msa0376600 | Msa1396940 | 0.822234 | 2.641490e-53 | -8.615850e-47 |
Msa0376600 | Msa1400120 | 0.814856 | 1.244891e-51 | -8.615850e-47 |
Msa0376600 | Msa1407970 | 0.836381 | 9.672966e-57 | -8.615850e-47 |
Msa0376600 | Msa1411980 | 0.828089 | 1.091109e-54 | -8.615850e-47 |
Msa0376600 | Msa1412110 | 0.825519 | 4.485885e-54 | -8.615850e-47 |
Msa0376600 | Msa1416260 | 0.832806 | 7.661532e-56 | -8.615850e-47 |
Msa0376600 | Msa1426910 | 0.824952 | 6.107520e-54 | -8.615850e-47 |
Msa0376600 | Msa1428780 | 0.841887 | 3.616783e-58 | -8.615850e-47 |
Msa0376600 | Msa1430130 | 0.814226 | 1.715728e-51 | -8.615850e-47 |
Msa0376600 | Msa1432130 | 0.801342 | 9.420630e-49 | -8.615850e-47 |
Msa0376600 | Msa1434040 | 0.838349 | 3.032295e-57 | -8.615850e-47 |
Msa0376600 | Msa1436600 | 0.819725 | 9.989487e-53 | -8.615850e-47 |
Msa0376600 | Msa1437330 | 0.836206 | 1.071684e-56 | -8.615850e-47 |
Msa0376600 | Msa1438840 | 0.852402 | 4.727491e-61 | -8.615850e-47 |
Msa0376600 | Msa1440190 | 0.836099 | 1.140926e-56 | -8.615850e-47 |
Msa0376600 | Msa1442790 | 0.874685 | 5.565809e-68 | -8.615850e-47 |
Msa0376600 | Msa1444120 | 0.861526 | 9.640706e-64 | -8.615850e-47 |
Msa0376600 | Msa1446080 | 0.830925 | 2.230845e-55 | -8.615850e-47 |
Msa0376600 | Msa1447890 | 0.821736 | 3.444676e-53 | -8.615850e-47 |
Msa0376600 | Msa1448490 | 0.822580 | 2.195105e-53 | -8.615850e-47 |
Msa0376600 | Msa1449750 | 0.835549 | 1.573044e-56 | -8.615850e-47 |
Msa0376600 | Msa1450720 | 0.804272 | 2.339696e-49 | -8.615850e-47 |
Msa0376600 | Msa1454960 | 0.821837 | 3.265039e-53 | -8.615850e-47 |
Msa0376600 | Msa1458030 | 0.817461 | 3.259149e-52 | -8.615850e-47 |
Msa0376600 | Msa1458810 | 0.838776 | 2.352565e-57 | -8.615850e-47 |
Msa0376600 | Msa1460750 | 0.812522 | 4.064198e-51 | -8.615850e-47 |
Msa0376600 | Msa1463600 | 0.832960 | 7.013343e-56 | -8.615850e-47 |
Msa0240270 | Msa0376600 | 0.820732 | 5.872505e-53 | -8.615850e-47 |
Msa0244970 | Msa0376600 | 0.859547 | 3.836590e-63 | -8.615850e-47 |
Msa0244980 | Msa0376600 | 0.856984 | 2.223085e-62 | -8.615850e-47 |
Msa0262370 | Msa0376600 | 0.851505 | 8.495946e-61 | -8.615850e-47 |
Msa0265600 | Msa0376600 | 0.841156 | 5.636810e-58 | -8.615850e-47 |
Msa0269470 | Msa0376600 | 0.826191 | 3.105882e-54 | -8.615850e-47 |
Msa0271580 | Msa0376600 | 0.818249 | 2.163555e-52 | -8.615850e-47 |
Msa0271790 | Msa0376600 | 0.835317 | 1.800183e-56 | -8.615850e-47 |
Msa0283420 | Msa0376600 | 0.836787 | 7.625257e-57 | -8.615850e-47 |
Msa0284450 | Msa0376600 | 0.833447 | 5.305812e-56 | -8.615850e-47 |
Msa0284820 | Msa0376600 | 0.808308 | 3.301026e-50 | -8.615850e-47 |
Msa0285330 | Msa0376600 | 0.839303 | 1.717329e-57 | -8.615850e-47 |
Msa0296790 | Msa0376600 | 0.804049 | 2.603460e-49 | -8.615850e-47 |
Msa0296920 | Msa0376600 | 0.802735 | 4.872060e-49 | -8.615850e-47 |
Msa0300150 | Msa0376600 | 0.839103 | 1.935447e-57 | -8.615850e-47 |
Msa0303460 | Msa0376600 | 0.831398 | 1.707759e-55 | -8.615850e-47 |
Msa0303520 | Msa0376600 | 0.820920 | 5.314159e-53 | -8.615850e-47 |
Msa0304840 | Msa0376600 | 0.857252 | 1.852646e-62 | -8.615850e-47 |
Msa0307310 | Msa0376600 | 0.805073 | 1.592098e-49 | -8.615850e-47 |
Msa0308440 | Msa0376600 | 0.829912 | 3.947895e-55 | -8.615850e-47 |
Msa0310430 | Msa0376600 | 0.837777 | 4.254937e-57 | -8.615850e-47 |
Msa0311720 | Msa0376600 | 0.801628 | 8.231723e-49 | -8.615850e-47 |
Msa0317960 | Msa0376600 | 0.807336 | 5.311449e-50 | -8.615850e-47 |
Msa0321690 | Msa0376600 | 0.840534 | 8.207340e-58 | -8.615850e-47 |
Msa0324240 | Msa0376600 | 0.822002 | 2.989726e-53 | -8.615850e-47 |
Msa0335060 | Msa0376600 | 0.805796 | 1.123079e-49 | -8.615850e-47 |
Msa0337590 | Msa0376600 | 0.816459 | 5.469495e-52 | -8.615850e-47 |
Msa0341230 | Msa0376600 | 0.852390 | 4.762766e-61 | -8.615850e-47 |
Msa0347950 | Msa0376600 | 0.823779 | 1.152400e-53 | -8.615850e-47 |
Msa0347990 | Msa0376600 | 0.831883 | 1.296923e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0376600 | MtrunA17_Chr3g0126951 | 98.020 | 404 | 7 | 1 | 1 | 403 | 1 | 404 | 0.0 | 816 |
Msa0376600 | MtrunA17_Chr1g0171331 | 93.675 | 332 | 15 | 1 | 72 | 403 | 19 | 344 | 0.0 | 600 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0376600 | AT5G53000.1 | 70.617 | 405 | 117 | 1 | 1 | 403 | 1 | 405 | 0.0 | 580 |
Find 129 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACACCAACCACTGATATT+TGG | 0.154577 | 3_1:-76696768 | Msa0376600:CDS |
TAAGATTCTAACTCCTCTTT+TGG | 0.196712 | 3_1:+76698194 | None:intergenic |
AAGAAAACATGACACCTTTC+TGG | 0.241137 | 3_1:+76698133 | None:intergenic |
TTCCGGTGAAAGATAATAAT+TGG | 0.248157 | 3_1:+76699641 | None:intergenic |
TGTTCAGGCATTTGATCTTC+TGG | 0.248796 | 3_1:-76697380 | Msa0376600:intron |
AGGGGTAAGCTTCGAATTTC+CGG | 0.250990 | 3_1:+76696230 | None:intergenic |
GATTCTGTTGGTAGTGTTTC+CGG | 0.262024 | 3_1:+76699624 | None:intergenic |
AATGCGAAAACATGATTAAT+AGG | 0.270151 | 3_1:-76699362 | Msa0376600:CDS |
CCACTCCTGGTTGAGCTATA+TGG | 0.287124 | 3_1:+76695952 | None:intergenic |
CTCTGATCAGCAACAGCTTT+TGG | 0.287618 | 3_1:+76698158 | None:intergenic |
GAGCTAGAGCTTTGGATGAT+TGG | 0.301964 | 3_1:-76696275 | Msa0376600:CDS |
TCTTCCTCTCCTGCCTCAAC+AGG | 0.311176 | 3_1:+76697838 | None:intergenic |
GGTTGTGCTGATATCCTCTT+TGG | 0.321034 | 3_1:+76699314 | None:intergenic |
TTGGAATACTAGCATATCTT+TGG | 0.334027 | 3_1:-76697488 | Msa0376600:CDS |
AACACCAACCACTGATATTT+GGG | 0.339739 | 3_1:-76696767 | Msa0376600:CDS |
ATTGGCTTCTTCAATGAATC+TGG | 0.346117 | 3_1:+76696374 | None:intergenic |
ATCATTGTGCCAAGATGAAT+TGG | 0.351143 | 3_1:+76696356 | None:intergenic |
CTGCCTCAACAGGGGTGGAC+AGG | 0.380810 | 3_1:+76697848 | None:intergenic |
GATGGAGGACATGCCGTTAC+CGG | 0.383115 | 3_1:-76699559 | Msa0376600:CDS |
TACCTTCGCTCAAGATGTTC+TGG | 0.387841 | 3_1:-76696826 | Msa0376600:CDS |
CTTCCATTCACAAAACTTTG+TGG | 0.391305 | 3_1:+76696744 | None:intergenic |
CATATCTTTGGCAATCTGTA+AGG | 0.394600 | 3_1:-76697476 | Msa0376600:intron |
ATTCATCTTGGCACAATGAT+AGG | 0.398345 | 3_1:-76696353 | Msa0376600:CDS |
GGCAGGAGAGGAAGAACTAT+TGG | 0.402541 | 3_1:-76697830 | Msa0376600:CDS |
GAGAGCAAGAATGGCAGCTC+AGG | 0.410453 | 3_1:-76696709 | Msa0376600:CDS |
CCATGTTTAGGATGGGGATC+AGG | 0.419549 | 3_1:-76696958 | Msa0376600:intron |
ATGTAGTCAGATGAATTTCC+AGG | 0.421026 | 3_1:+76696080 | None:intergenic |
GATAAATATGTACCTATGAC+TGG | 0.430417 | 3_1:+76696677 | None:intergenic |
ATATGGCAAATTAAACAAAC+TGG | 0.437156 | 3_1:+76695969 | None:intergenic |
CTGTCCACCCCTGTTGAGGC+AGG | 0.437775 | 3_1:-76697847 | Msa0376600:CDS |
AGGTCTTCCAACCCAGTCAT+AGG | 0.441903 | 3_1:-76696689 | Msa0376600:intron |
TACAAATGAGAGAGCAAGAA+TGG | 0.443576 | 3_1:-76696718 | Msa0376600:CDS |
TTGAAGAAGCCAATTCATCT+TGG | 0.455058 | 3_1:-76696365 | Msa0376600:CDS |
CACGCCACCGCCACTGAGTC+CGG | 0.455804 | 3_1:-76699510 | Msa0376600:CDS |
GCCTGGGAAGCCTTTAGAAT+CGG | 0.455958 | 3_1:+76698401 | None:intergenic |
TCATCCTCCTCCTCTTCACC+TGG | 0.457933 | 3_1:+76696321 | None:intergenic |
TGCCCTGTCCACCCCTGTTG+AGG | 0.460057 | 3_1:-76697851 | Msa0376600:CDS |
GGAAGCAGGACTAAAAGAAA+TGG | 0.466493 | 3_1:-76696427 | Msa0376600:CDS |
GATGATAATCCGCGGGGTGC+CGG | 0.475557 | 3_1:-76696249 | Msa0376600:CDS |
TTTAAAGGAAATCCCACTCC+TGG | 0.477352 | 3_1:+76695939 | None:intergenic |
TGCTCATTATTCTTCAACCT+GGG | 0.489433 | 3_1:+76696184 | None:intergenic |
CTCTCCTGCCTCAACAGGGG+TGG | 0.490362 | 3_1:+76697843 | None:intergenic |
CAAAAGCTGTTGCTGATCAG+AGG | 0.494147 | 3_1:-76698157 | Msa0376600:CDS |
TCTGGAAATGATTAAGAAAG+AGG | 0.495866 | 3_1:-76697362 | Msa0376600:CDS |
TGACGGAGAAGAAGAAAGAG+AGG | 0.495976 | 3_1:-76697803 | Msa0376600:intron |
TTCCAATTATTATCTTTCAC+CGG | 0.497028 | 3_1:-76699643 | Msa0376600:five_prime_UTR |
TGCCTCAACAGGGGTGGACA+GGG | 0.499117 | 3_1:+76697849 | None:intergenic |
TAATTGAATCTATTCTTCCC+AGG | 0.501131 | 3_1:-76696201 | Msa0376600:three_prime_UTR |
TCCGATGGGTGAGATGAAGA+TGG | 0.501968 | 3_1:-76699577 | Msa0376600:exon |
GTCAACTCAGCAAGATAATA+CGG | 0.507251 | 3_1:+76698452 | None:intergenic |
ACCGATTCTAAAGGCTTCCC+AGG | 0.508228 | 3_1:-76698402 | Msa0376600:CDS |
TGAAGATGACGATGCTGCAC+AGG | 0.511553 | 3_1:-76696301 | Msa0376600:CDS |
TGTTCAGGAGCTTGTCAAGA+AGG | 0.513400 | 3_1:-76699403 | Msa0376600:intron |
GAAAACATGATTAATAGGCT+TGG | 0.519278 | 3_1:-76699357 | Msa0376600:CDS |
GGAGATGCTTTCTGCTGTAA+AGG | 0.520685 | 3_1:-76697338 | Msa0376600:CDS |
TTGCTCATTATTCTTCAACC+TGG | 0.521555 | 3_1:+76696183 | None:intergenic |
AAATGGAAATTATGAATACA+TGG | 0.530525 | 3_1:-76696410 | Msa0376600:CDS |
TGCTGATCAGAGGGCCAGAA+AGG | 0.530837 | 3_1:-76698147 | Msa0376600:intron |
CTTCCTCTCCTGCCTCAACA+GGG | 0.530933 | 3_1:+76697839 | None:intergenic |
AATTCGAAGCTTACCCCTTG+CGG | 0.531093 | 3_1:-76696225 | Msa0376600:CDS |
AGAAAATAGCACATGATGAC+AGG | 0.531695 | 3_1:-76698427 | Msa0376600:CDS |
TGCTTCCTCAATGCTCATAG+TGG | 0.531761 | 3_1:+76696443 | None:intergenic |
ACAGGATAGAGCTAGAGCTT+TGG | 0.535946 | 3_1:-76696283 | Msa0376600:CDS |
TAGAGCTTTGGATGATTGGA+AGG | 0.539728 | 3_1:-76696271 | Msa0376600:CDS |
GTTCAGGAGCTTGTCAAGAA+GGG | 0.541089 | 3_1:-76699402 | Msa0376600:intron |
GAAGTTTAAGCCAGGTGAAG+AGG | 0.541846 | 3_1:-76696331 | Msa0376600:CDS |
CGTCTGAGATTTGATTCTGT+TGG | 0.545001 | 3_1:+76699612 | None:intergenic |
GAAACGAAAGCGTACTTGGT+CGG | 0.545373 | 3_1:+76699485 | None:intergenic |
TAAGCCAGGTGAAGAGGAGG+AGG | 0.545443 | 3_1:-76696325 | Msa0376600:CDS |
GGCACCGGACTCAGTGGCGG+TGG | 0.546659 | 3_1:+76699506 | None:intergenic |
CGGACTCAGTGGCGGTGGCG+TGG | 0.550530 | 3_1:+76699511 | None:intergenic |
ATATGTACCTATGACTGGGT+TGG | 0.554490 | 3_1:+76696682 | None:intergenic |
GCGAAGGTAGCACATGTGAT+TGG | 0.558292 | 3_1:+76696840 | None:intergenic |
CACCCCTGTTGAGGCAGGAG+AGG | 0.559655 | 3_1:-76697842 | Msa0376600:CDS |
ATAGATTCAATTAGCCGCAA+GGG | 0.564088 | 3_1:+76696211 | None:intergenic |
CTTGCTTGTTCAAACAGCGC+CGG | 0.565472 | 3_1:+76699540 | None:intergenic |
GCTTCCTCAATGCTCATAGT+GGG | 0.565665 | 3_1:+76696444 | None:intergenic |
AAAGCGTACTTGGTCGGCAC+CGG | 0.566041 | 3_1:+76699491 | None:intergenic |
GATGGAGCTGGTCCCAAAAG+AGG | 0.566346 | 3_1:-76698207 | Msa0376600:CDS |
TCCATCTTCATCTCACCCAT+CGG | 0.567407 | 3_1:+76699576 | None:intergenic |
TTGGAAGGATGATAATCCGC+GGG | 0.569064 | 3_1:-76696256 | Msa0376600:CDS |
CCATATAGCTCAACCAGGAG+TGG | 0.569742 | 3_1:-76695952 | Msa0376600:three_prime_UTR |
TGTTCAAACAGCGCCGGTAA+CGG | 0.569938 | 3_1:+76699546 | None:intergenic |
CTCTGCTAATGAAACCAAAG+AGG | 0.570061 | 3_1:-76699328 | Msa0376600:CDS |
GTAAAACATAGAATAAAAGA+AGG | 0.570626 | 3_1:+76696014 | None:intergenic |
TTCCAGAACATCTTGAGCGA+AGG | 0.571431 | 3_1:+76696824 | None:intergenic |
GCACATGTGATTGGTGGAGA+TGG | 0.572371 | 3_1:+76696849 | None:intergenic |
CATATAGCTCAACCAGGAGT+GGG | 0.572704 | 3_1:-76695951 | Msa0376600:three_prime_UTR |
TGACAGGATACCGATTCTAA+AGG | 0.573766 | 3_1:-76698411 | Msa0376600:CDS |
AGTTAGAATCTTATATGCAA+GGG | 0.574858 | 3_1:-76698184 | Msa0376600:CDS |
AAGGTAGCACATGTGATTGG+TGG | 0.577338 | 3_1:+76696843 | None:intergenic |
CAAAATCTTTAACACAGACT+AGG | 0.577669 | 3_1:+76696107 | None:intergenic |
GAGTTAGAATCTTATATGCA+AGG | 0.580289 | 3_1:-76698185 | Msa0376600:CDS |
GTTAGAAATAAACGAGCGAA+AGG | 0.582445 | 3_1:-76697902 | Msa0376600:CDS |
CGGCGCTGTTTGAACAAGCA+AGG | 0.583327 | 3_1:-76699539 | Msa0376600:CDS |
GTTTAAGCCAGGTGAAGAGG+AGG | 0.583570 | 3_1:-76696328 | Msa0376600:CDS |
GGCTTCCCAGGCAAAACTGA+AGG | 0.587652 | 3_1:-76698390 | Msa0376600:intron |
TGTAAAGGATAGACAATCCA+AGG | 0.589440 | 3_1:-76697323 | Msa0376600:intron |
TTTGTGTTCGTGTGCTTGCG+AGG | 0.589889 | 3_1:+76696788 | None:intergenic |
AAAAGCTGTTGCTGATCAGA+GGG | 0.591137 | 3_1:-76698156 | Msa0376600:CDS |
GGAAATGATTAAGAAAGAGG+AGG | 0.591992 | 3_1:-76697359 | Msa0376600:CDS |
AACCGATCTCAAGTACATCC+TGG | 0.592669 | 3_1:-76699295 | Msa0376600:intron |
GTGGCCCAAATATCAGTGGT+TGG | 0.592707 | 3_1:+76696763 | None:intergenic |
ACTATGAGCATTGAGGAAGC+AGG | 0.594997 | 3_1:-76696441 | Msa0376600:CDS |
TTCCTCTCCTGCCTCAACAG+GGG | 0.599086 | 3_1:+76697840 | None:intergenic |
TACCAGGATGTACTTGAGAT+CGG | 0.603064 | 3_1:+76699293 | None:intergenic |
AATGATAGGAAGTTTAAGCC+AGG | 0.610210 | 3_1:-76696339 | Msa0376600:CDS |
AAATAAACGAGCGAAAGGAA+CGG | 0.614011 | 3_1:-76697897 | Msa0376600:CDS |
AATAGATTCAATTAGCCGCA+AGG | 0.614970 | 3_1:+76696210 | None:intergenic |
GAATAAAAGAAGGTGAGATG+AGG | 0.616605 | 3_1:+76696024 | None:intergenic |
GAAGAACTATTGGAAGATGA+CGG | 0.618639 | 3_1:-76697820 | Msa0376600:CDS |
ATTTGCCATATAGCTCAACC+AGG | 0.621910 | 3_1:-76695957 | Msa0376600:three_prime_UTR |
ATAAATATGTACCTATGACT+GGG | 0.627631 | 3_1:+76696678 | None:intergenic |
CTTTGTGGCCCAAATATCAG+TGG | 0.628060 | 3_1:+76696759 | None:intergenic |
TTCGCTCAAGATGTTCTGGA+AGG | 0.633258 | 3_1:-76696822 | Msa0376600:CDS |
GTCGGCACCGGACTCAGTGG+CGG | 0.633971 | 3_1:+76699503 | None:intergenic |
AGGTTGAAGAATAATGAGCA+AGG | 0.634107 | 3_1:-76696181 | Msa0376600:three_prime_UTR |
ACGAGCGAAAGGAACGGCGT+GGG | 0.637909 | 3_1:-76697891 | Msa0376600:CDS |
GTTAGAATCTTATATGCAAG+GGG | 0.638453 | 3_1:-76698183 | Msa0376600:CDS |
GGTTGAAGAATAATGAGCAA+GGG | 0.648208 | 3_1:-76696180 | Msa0376600:three_prime_UTR |
GATGCCCACTATGAGCATTG+AGG | 0.648707 | 3_1:-76696448 | Msa0376600:CDS |
TTGGTCGGCACCGGACTCAG+TGG | 0.649187 | 3_1:+76699500 | None:intergenic |
TTCGAATTTCCGGCACCCCG+CGG | 0.649460 | 3_1:+76696240 | None:intergenic |
TAGATTCAATTAGCCGCAAG+GGG | 0.654034 | 3_1:+76696212 | None:intergenic |
AACGAGCGAAAGGAACGGCG+TGG | 0.663839 | 3_1:-76697892 | Msa0376600:CDS |
ATTGGAAGGATGATAATCCG+CGG | 0.675321 | 3_1:-76696257 | Msa0376600:CDS |
GCTTGTCAAGAAGGGATGCG+AGG | 0.685734 | 3_1:-76699394 | Msa0376600:CDS |
GATGGGTGAGATGAAGATGG+AGG | 0.688122 | 3_1:-76699574 | Msa0376600:CDS |
TGGAAGGATGATAATCCGCG+GGG | 0.769686 | 3_1:-76696255 | Msa0376600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATATTGAAGAAATTAACA+AGG | + | chr3_1:76697278-76697297 | None:intergenic | 15.0% |
!!! | TTACTGAAAACATTTTTTTT+AGG | - | chr3_1:76697325-76697344 | Msa0376600:CDS | 15.0% |
!! | AAATATAAGTTTAAACAAAG+TGG | + | chr3_1:76698151-76698170 | None:intergenic | 15.0% |
!! | TAGTAAGTCTAGTTATTATA+AGG | - | chr3_1:76696451-76696470 | Msa0376600:CDS | 20.0% |
!! | AATCCTAATGTGTATTAATA+TGG | - | chr3_1:76696955-76696974 | Msa0376600:intron | 20.0% |
!! | ATCCTAATGTGTATTAATAT+GGG | - | chr3_1:76696956-76696975 | Msa0376600:intron | 20.0% |
!! | GATAACAAAAAATTGGTAAA+TGG | + | chr3_1:76697092-76697111 | None:intergenic | 20.0% |
!! | TTTCATAACAAGTGAATAAT+GGG | + | chr3_1:76697536-76697555 | None:intergenic | 20.0% |
!!! | TTTTCATAACAAGTGAATAA+TGG | + | chr3_1:76697537-76697556 | None:intergenic | 20.0% |
!! | TTATATTTCGATTATTCTCA+TGG | - | chr3_1:76698163-76698182 | Msa0376600:CDS | 20.0% |
!!! | GTTTTATATTGCCATAATTA+TGG | - | chr3_1:76698348-76698367 | Msa0376600:intron | 20.0% |
!! | AATGTGCATTTATTGATAAA+GGG | + | chr3_1:76698926-76698945 | None:intergenic | 20.0% |
!! | AAATGTGCATTTATTGATAA+AGG | + | chr3_1:76698927-76698946 | None:intergenic | 20.0% |
!! | AAATGGAAATTATGAATACA+TGG | - | chr3_1:76699167-76699186 | Msa0376600:intron | 20.0% |
!! | GTAAAACATAGAATAAAAGA+AGG | + | chr3_1:76699566-76699585 | None:intergenic | 20.0% |
! | TTCCAATTATTATCTTTCAC+CGG | - | chr3_1:76695934-76695953 | Msa0376600:three_prime_UTR | 25.0% |
! | AATGCGAAAACATGATTAAT+AGG | - | chr3_1:76696215-76696234 | Msa0376600:exon | 25.0% |
! | TTCTACTAGATTTCTATGTT+TGG | + | chr3_1:76696727-76696746 | None:intergenic | 25.0% |
! | AATAAAACACGATTACACAA+TGG | - | chr3_1:76696766-76696785 | Msa0376600:CDS | 25.0% |
! | ATAAAACACGATTACACAAT+GGG | - | chr3_1:76696767-76696786 | Msa0376600:CDS | 25.0% |
!! | TAAATTTTTCCAGTTTCACT+CGG | + | chr3_1:76696838-76696857 | None:intergenic | 25.0% |
! | TTCCCATATTAATACACATT+AGG | + | chr3_1:76696961-76696980 | None:intergenic | 25.0% |
! | CTTCAATATTCTGTACTTAA+AGG | + | chr3_1:76697039-76697058 | None:intergenic | 25.0% |
! | AGGGAATGATAACAAAAAAT+TGG | + | chr3_1:76697099-76697118 | None:intergenic | 25.0% |
! | TTTCAGTAAGCTTCAATAAA+AGG | + | chr3_1:76697314-76697333 | None:intergenic | 25.0% |
! | AGTTAGAATCTTATATGCAA+GGG | - | chr3_1:76697393-76697412 | Msa0376600:intron | 25.0% |
! | ACTAAATAAAGTAGCAGTAA+TGG | + | chr3_1:76697823-76697842 | None:intergenic | 25.0% |
!!! | ATTACTGCTACTTTATTTAG+TGG | - | chr3_1:76697822-76697841 | Msa0376600:CDS | 25.0% |
!!! | TTACTGCTACTTTATTTAGT+GGG | - | chr3_1:76697823-76697842 | Msa0376600:CDS | 25.0% |
!!! | TTATTTTTCTTCTCCTTTTC+AGG | - | chr3_1:76698065-76698084 | Msa0376600:intron | 25.0% |
! | ATTATGGCAATATAAAACAG+TGG | + | chr3_1:76698346-76698365 | None:intergenic | 25.0% |
! | TTATATTGCCATAATTATGG+TGG | - | chr3_1:76698351-76698370 | Msa0376600:intron | 25.0% |
! | AATAAAAGTTAAGTTCTACC+AGG | + | chr3_1:76698432-76698451 | None:intergenic | 25.0% |
!! | CACATTTCACTTGATAATTA+TGG | - | chr3_1:76698466-76698485 | Msa0376600:intron | 25.0% |
! | ATAAATATGTACCTATGACT+GGG | + | chr3_1:76698902-76698921 | None:intergenic | 25.0% |
! | ATGTGCATTTATTGATAAAG+GGG | + | chr3_1:76698925-76698944 | None:intergenic | 25.0% |
!! | ATTGAACTTCATTTTCTTTC+AGG | + | chr3_1:76699011-76699030 | None:intergenic | 25.0% |
!!! | TGAGTTGAATATTTTGTTGA+AGG | - | chr3_1:76699107-76699126 | Msa0376600:intron | 25.0% |
!! | TGTTAAAGATTTTGTATACC+TGG | - | chr3_1:76699479-76699498 | Msa0376600:intron | 25.0% |
! | ATATGGCAAATTAAACAAAC+TGG | + | chr3_1:76699611-76699630 | None:intergenic | 25.0% |
TTCCGGTGAAAGATAATAAT+TGG | + | chr3_1:76695939-76695958 | None:intergenic | 30.0% | |
! | ACGTTAATTTTCTTTTCCGA+TGG | - | chr3_1:76695985-76696004 | Msa0376600:three_prime_UTR | 30.0% |
! | CGTTAATTTTCTTTTCCGAT+GGG | - | chr3_1:76695986-76696005 | Msa0376600:three_prime_UTR | 30.0% |
GAAAACATGATTAATAGGCT+TGG | - | chr3_1:76696220-76696239 | Msa0376600:exon | 30.0% | |
GGAATGAGTATAAAAATCCA+AGG | - | chr3_1:76696501-76696520 | Msa0376600:intron | 30.0% | |
CTGTGCAATTTATTGTAATG+CGG | - | chr3_1:76696619-76696638 | Msa0376600:intron | 30.0% | |
TTGTGTTCTTAAGAGATGTT+TGG | - | chr3_1:76696655-76696674 | Msa0376600:intron | 30.0% | |
TTCATGATTGTGATAGAAAC+TGG | - | chr3_1:76696699-76696718 | Msa0376600:CDS | 30.0% | |
ACTAGTTGTTGCACATATTT+AGG | + | chr3_1:76696875-76696894 | None:intergenic | 30.0% | |
!!! | TTTTTTGTTATCATTCCCTC+AGG | - | chr3_1:76697100-76697119 | Msa0376600:intron | 30.0% |
! | TGTGCATATAGTGTTGAATT+GGG | + | chr3_1:76697253-76697272 | None:intergenic | 30.0% |
! | TTGTGCATATAGTGTTGAAT+TGG | + | chr3_1:76697254-76697273 | None:intergenic | 30.0% |
! | GGAATTTATCTCATTTTGTG+AGG | - | chr3_1:76697346-76697365 | Msa0376600:CDS | 30.0% |
! | AAGATTCTAACTCCTCTTTT+GGG | + | chr3_1:76697385-76697404 | None:intergenic | 30.0% |
! | TAAGATTCTAACTCCTCTTT+TGG | + | chr3_1:76697386-76697405 | None:intergenic | 30.0% |
GAGTTAGAATCTTATATGCA+AGG | - | chr3_1:76697392-76697411 | Msa0376600:intron | 30.0% | |
GTTAGAATCTTATATGCAAG+GGG | - | chr3_1:76697394-76697413 | Msa0376600:intron | 30.0% | |
AAGCTAGTCCAATAATATGT+AGG | + | chr3_1:76697951-76697970 | None:intergenic | 30.0% | |
! | CTAGCTTGTGATTTATGAAA+TGG | - | chr3_1:76697964-76697983 | Msa0376600:intron | 30.0% |
GGAGAAGAAAAATAAGTGAA+TGG | + | chr3_1:76698060-76698079 | None:intergenic | 30.0% | |
TTGGAATACTAGCATATCTT+TGG | - | chr3_1:76698089-76698108 | Msa0376600:intron | 30.0% | |
TCTGGAAATGATTAAGAAAG+AGG | - | chr3_1:76698215-76698234 | Msa0376600:CDS | 30.0% | |
! | TACTAAGCATTTTACTACCT+TGG | + | chr3_1:76698274-76698293 | None:intergenic | 30.0% |
AAAGATCTCAACCACAATAA+TGG | + | chr3_1:76698315-76698334 | None:intergenic | 30.0% | |
AAAGATCTCCACCATAATTA+TGG | + | chr3_1:76698362-76698381 | None:intergenic | 30.0% | |
! | AATTATGGTGGAGATCTTTA+TGG | - | chr3_1:76698363-76698382 | Msa0376600:intron | 30.0% |
! | ATTATGGTGGAGATCTTTAT+GGG | - | chr3_1:76698364-76698383 | Msa0376600:intron | 30.0% |
CTTAAAGAACTGTTATAACC+TGG | - | chr3_1:76698411-76698430 | Msa0376600:CDS | 30.0% | |
! | CTTGATAATTATGGAATACC+AGG | - | chr3_1:76698475-76698494 | Msa0376600:intron | 30.0% |
!! | TTCTTCTTTAAAGCAGAACA+TGG | + | chr3_1:76698536-76698555 | None:intergenic | 30.0% |
!! | TGTTCTGCTTTAAAGAAGAA+TGG | - | chr3_1:76698536-76698555 | Msa0376600:intron | 30.0% |
!! | GTTCTGCTTTAAAGAAGAAT+GGG | - | chr3_1:76698537-76698556 | Msa0376600:intron | 30.0% |
!!! | GGGAAATTGTTTTTTTTCTG+CGG | - | chr3_1:76698557-76698576 | Msa0376600:intron | 30.0% |
!!! | GGAAATTGTTTTTTTTCTGC+GGG | - | chr3_1:76698558-76698577 | Msa0376600:intron | 30.0% |
! | CTTGTAATTTTGCCATGTTT+AGG | - | chr3_1:76698607-76698626 | Msa0376600:intron | 30.0% |
! | TAATTTTGCCATGTTTAGGA+TGG | - | chr3_1:76698611-76698630 | Msa0376600:intron | 30.0% |
!! | AATTTTGCCATGTTTAGGAT+GGG | - | chr3_1:76698612-76698631 | Msa0376600:intron | 30.0% |
!! | GGAGTTTTCTAAGGATATTA+TGG | - | chr3_1:76698640-76698659 | Msa0376600:intron | 30.0% |
GATAAATATGTACCTATGAC+TGG | + | chr3_1:76698903-76698922 | None:intergenic | 30.0% | |
AATGCACATTTCTTAGCTAA+TGG | - | chr3_1:76698936-76698955 | Msa0376600:intron | 30.0% | |
!! | TAATGGAAAGCTTTGGAATA+GGG | - | chr3_1:76698953-76698972 | Msa0376600:intron | 30.0% |
TTAGAACAACAAAACTGCAA+GGG | + | chr3_1:76699035-76699054 | None:intergenic | 30.0% | |
TAATTGAATCTATTCTTCCC+AGG | - | chr3_1:76699376-76699395 | Msa0376600:CDS | 30.0% | |
CAAAATCTTTAACACAGACT+AGG | + | chr3_1:76699473-76699492 | None:intergenic | 30.0% | |
! | CTATGTTTTACATCTTCACA+TGG | - | chr3_1:76699575-76699594 | Msa0376600:CDS | 30.0% |
!! | GAGTTGTGTGTAATTTGTTC+AGG | - | chr3_1:76696159-76696178 | Msa0376600:three_prime_UTR | 35.0% |
AATCAATCAATCGAAAAGCG+TGG | + | chr3_1:76696333-76696352 | None:intergenic | 35.0% | |
! | AATTTTACATGCACCGAAGA+TGG | + | chr3_1:76696535-76696554 | None:intergenic | 35.0% |
CTATCACAATCATGAACCAT+CGG | + | chr3_1:76696695-76696714 | None:intergenic | 35.0% | |
TGCAAGCATGAATGATGTTT+GGG | + | chr3_1:76696795-76696814 | None:intergenic | 35.0% | |
TTGCAAGCATGAATGATGTT+TGG | + | chr3_1:76696796-76696815 | None:intergenic | 35.0% | |
TTAAGTAAACCGAGTGAAAC+TGG | - | chr3_1:76696826-76696845 | Msa0376600:CDS | 35.0% | |
GTGTATTAATATGGGAAAGC+TGG | - | chr3_1:76696964-76696983 | Msa0376600:intron | 35.0% | |
TAAAGGTCACATGGGAATAT+GGG | + | chr3_1:76697022-76697041 | None:intergenic | 35.0% | |
TTAAAGGTCACATGGGAATA+TGG | + | chr3_1:76697023-76697042 | None:intergenic | 35.0% | |
TCTGTACTTAAAGGTCACAT+GGG | + | chr3_1:76697030-76697049 | None:intergenic | 35.0% | |
TTCTGTACTTAAAGGTCACA+TGG | + | chr3_1:76697031-76697050 | None:intergenic | 35.0% | |
GTCAACTCAGCAAGATAATA+CGG | + | chr3_1:76697128-76697147 | None:intergenic | 35.0% | |
!!! | GTCATCATGTGCTATTTTCT+CGG | + | chr3_1:76697150-76697169 | None:intergenic | 35.0% |
AGAAAATAGCACATGATGAC+AGG | - | chr3_1:76697150-76697169 | Msa0376600:intron | 35.0% | |
! | ATAGTGTTGAATTGGGTGTT+GGG | + | chr3_1:76697246-76697265 | None:intergenic | 35.0% |
! | TATAGTGTTGAATTGGGTGT+TGG | + | chr3_1:76697247-76697266 | None:intergenic | 35.0% |
AAGAAAACATGACACCTTTC+TGG | + | chr3_1:76697447-76697466 | None:intergenic | 35.0% | |
GTTAGAAATAAACGAGCGAA+AGG | - | chr3_1:76697675-76697694 | Msa0376600:intron | 35.0% | |
AAATAAACGAGCGAAAGGAA+CGG | - | chr3_1:76697680-76697699 | Msa0376600:intron | 35.0% | |
GAAGAACTATTGGAAGATGA+CGG | - | chr3_1:76697757-76697776 | Msa0376600:intron | 35.0% | |
!! | AAAACACATTTTCAGGGAAG+CGG | + | chr3_1:76697865-76697884 | None:intergenic | 35.0% |
! | CAGGCAAAAACACATTTTCA+GGG | + | chr3_1:76697871-76697890 | None:intergenic | 35.0% |
TGGATTTATCGACCATTAGA+TGG | - | chr3_1:76697892-76697911 | Msa0376600:CDS | 35.0% | |
GGATTTATCGACCATTAGAT+GGG | - | chr3_1:76697893-76697912 | Msa0376600:CDS | 35.0% | |
!! | CTACTTTTAAGCCCATCTAA+TGG | + | chr3_1:76697907-76697926 | None:intergenic | 35.0% |
! | CATTAGATGGGCTTAAAAGT+AGG | - | chr3_1:76697905-76697924 | Msa0376600:CDS | 35.0% |
ATAATATGTAGGACTGCTGT+AGG | + | chr3_1:76697940-76697959 | None:intergenic | 35.0% | |
ACAGCAGTCCTACATATTAT+TGG | - | chr3_1:76697940-76697959 | Msa0376600:CDS | 35.0% | |
! | GTGATTTATGAAATGGACTC+TGG | - | chr3_1:76697971-76697990 | Msa0376600:intron | 35.0% |
CATATCTTTGGCAATCTGTA+AGG | - | chr3_1:76698101-76698120 | Msa0376600:intron | 35.0% | |
ATGGTTGTCTTGAAATGTTC+AGG | - | chr3_1:76698182-76698201 | Msa0376600:CDS | 35.0% | |
GGAAATGATTAAGAAAGAGG+AGG | - | chr3_1:76698218-76698237 | Msa0376600:CDS | 35.0% | |
TGTAAAGGATAGACAATCCA+AGG | - | chr3_1:76698254-76698273 | Msa0376600:intron | 35.0% | |
ACAATAATGGTACTTCGGTA+AGG | + | chr3_1:76698302-76698321 | None:intergenic | 35.0% | |
! | TTACCGAAGTACCATTATTG+TGG | - | chr3_1:76698301-76698320 | Msa0376600:intron | 35.0% |
CAACCACAATAATGGTACTT+CGG | + | chr3_1:76698307-76698326 | None:intergenic | 35.0% | |
!! | ATTTTGCCATGTTTAGGATG+GGG | - | chr3_1:76698613-76698632 | Msa0376600:intron | 35.0% |
AAACACCAACCACTGATATT+TGG | - | chr3_1:76698809-76698828 | Msa0376600:intron | 35.0% | |
AACACCAACCACTGATATTT+GGG | - | chr3_1:76698810-76698829 | Msa0376600:intron | 35.0% | |
CTTCCATTCACAAAACTTTG+TGG | + | chr3_1:76698836-76698855 | None:intergenic | 35.0% | |
TACAAATGAGAGAGCAAGAA+TGG | - | chr3_1:76698859-76698878 | Msa0376600:intron | 35.0% | |
TCTTAGCTAATGGAAAGCTT+TGG | - | chr3_1:76698946-76698965 | Msa0376600:intron | 35.0% | |
!! | CTAATGGAAAGCTTTGGAAT+AGG | - | chr3_1:76698952-76698971 | Msa0376600:intron | 35.0% |
! | TCAGGCATAAAGTCTTTTGA+TGG | + | chr3_1:76698993-76699012 | None:intergenic | 35.0% |
GTTAGAACAACAAAACTGCA+AGG | + | chr3_1:76699036-76699055 | None:intergenic | 35.0% | |
!!! | CAGTTTTGTTGTTCTAACCT+AGG | - | chr3_1:76699038-76699057 | Msa0376600:intron | 35.0% |
TTCTAACCTAGGAATGATAG+AGG | - | chr3_1:76699049-76699068 | Msa0376600:intron | 35.0% | |
ATTGATCCTCTATCATTCCT+AGG | + | chr3_1:76699058-76699077 | None:intergenic | 35.0% | |
! | ATTGGCTTCTTCAATGAATC+TGG | + | chr3_1:76699206-76699225 | None:intergenic | 35.0% |
TTGAAGAAGCCAATTCATCT+TGG | - | chr3_1:76699212-76699231 | Msa0376600:intron | 35.0% | |
ATCATTGTGCCAAGATGAAT+TGG | + | chr3_1:76699224-76699243 | None:intergenic | 35.0% | |
ATTCATCTTGGCACAATGAT+AGG | - | chr3_1:76699224-76699243 | Msa0376600:intron | 35.0% | |
AATGATAGGAAGTTTAAGCC+AGG | - | chr3_1:76699238-76699257 | Msa0376600:intron | 35.0% | |
ATAGATTCAATTAGCCGCAA+GGG | + | chr3_1:76699369-76699388 | None:intergenic | 35.0% | |
AATAGATTCAATTAGCCGCA+AGG | + | chr3_1:76699370-76699389 | None:intergenic | 35.0% | |
TGCTCATTATTCTTCAACCT+GGG | + | chr3_1:76699396-76699415 | None:intergenic | 35.0% | |
TTGCTCATTATTCTTCAACC+TGG | + | chr3_1:76699397-76699416 | None:intergenic | 35.0% | |
AGGTTGAAGAATAATGAGCA+AGG | - | chr3_1:76699396-76699415 | Msa0376600:CDS | 35.0% | |
GGTTGAAGAATAATGAGCAA+GGG | - | chr3_1:76699397-76699416 | Msa0376600:CDS | 35.0% | |
ATGTAGTCAGATGAATTTCC+AGG | + | chr3_1:76699500-76699519 | None:intergenic | 35.0% | |
!!! | ATATTTTTTGAGTGCAGCGT+AGG | - | chr3_1:76699524-76699543 | Msa0376600:CDS | 35.0% |
!!! | TATTTTTTGAGTGCAGCGTA+GGG | - | chr3_1:76699525-76699544 | Msa0376600:CDS | 35.0% |
GAATAAAAGAAGGTGAGATG+AGG | + | chr3_1:76699556-76699575 | None:intergenic | 35.0% | |
!! | GATTCTGTTGGTAGTGTTTC+CGG | + | chr3_1:76695956-76695975 | None:intergenic | 40.0% |
! | CGTCTGAGATTTGATTCTGT+TGG | + | chr3_1:76695968-76695987 | None:intergenic | 40.0% |
! | AAGAGAAACGAAAGCGTACT+TGG | + | chr3_1:76696099-76696118 | None:intergenic | 40.0% |
CTCTGCTAATGAAACCAAAG+AGG | - | chr3_1:76696249-76696268 | Msa0376600:CDS | 40.0% | |
TACCAGGATGTACTTGAGAT+CGG | + | chr3_1:76696287-76696306 | None:intergenic | 40.0% | |
!! | GAAGCATAAGAAGAAGTACC+AGG | + | chr3_1:76696303-76696322 | None:intergenic | 40.0% |
TTATTGTAATGCGGTCACTG+TGG | - | chr3_1:76696628-76696647 | Msa0376600:intron | 40.0% | |
ATTAATATGGGAAAGCTGGC+TGG | - | chr3_1:76696968-76696987 | Msa0376600:intron | 40.0% | |
!! | TGACAGGATACCGATTCTAA+AGG | - | chr3_1:76697166-76697185 | Msa0376600:intron | 40.0% |
! | TAGTGTTGAATTGGGTGTTG+GGG | + | chr3_1:76697245-76697264 | None:intergenic | 40.0% |
! | TATCTCATTTTGTGAGGCGA+TGG | - | chr3_1:76697352-76697371 | Msa0376600:CDS | 40.0% |
AAAAGCTGTTGCTGATCAGA+GGG | - | chr3_1:76697421-76697440 | Msa0376600:intron | 40.0% | |
! | CCAGGCAAAAACACATTTTC+AGG | + | chr3_1:76697872-76697891 | None:intergenic | 40.0% |
!! | CCTGAAAATGTGTTTTTGCC+TGG | - | chr3_1:76697869-76697888 | Msa0376600:CDS | 40.0% |
!! | GAAAATGTGTTTTTGCCTGG+TGG | - | chr3_1:76697872-76697891 | Msa0376600:CDS | 40.0% |
TAATGGTCGATAAATCCACC+AGG | + | chr3_1:76697890-76697909 | None:intergenic | 40.0% | |
TGGGCTTAAAAGTAGGTTTG+TGG | - | chr3_1:76697912-76697931 | Msa0376600:CDS | 40.0% | |
GGGCTTAAAAGTAGGTTTGT+GGG | - | chr3_1:76697913-76697932 | Msa0376600:CDS | 40.0% | |
!! | TTTCTTCTCCTTTTCAGGCT+TGG | - | chr3_1:76698070-76698089 | Msa0376600:intron | 40.0% |
CTAGTATTCCAAGCCTGAAA+AGG | + | chr3_1:76698081-76698100 | None:intergenic | 40.0% | |
TGTTCAGGCATTTGATCTTC+TGG | - | chr3_1:76698197-76698216 | Msa0376600:CDS | 40.0% | |
TAATGGTACTTCGGTAAGGA+AGG | + | chr3_1:76698298-76698317 | None:intergenic | 40.0% | |
CATCTATATGTCTCAAAGCC+TGG | + | chr3_1:76698496-76698515 | None:intergenic | 40.0% | |
!!! | ATGCCAAGCTTCTGCTTTTT+TGG | + | chr3_1:76698675-76698694 | None:intergenic | 40.0% |
ATATGTACCTATGACTGGGT+TGG | + | chr3_1:76698898-76698917 | None:intergenic | 40.0% | |
GGAAGCAGGACTAAAAGAAA+TGG | - | chr3_1:76699150-76699169 | Msa0376600:intron | 40.0% | |
!! | TAGAGCTTTGGATGATTGGA+AGG | - | chr3_1:76699306-76699325 | Msa0376600:CDS | 40.0% |
ATTGGAAGGATGATAATCCG+CGG | - | chr3_1:76699320-76699339 | Msa0376600:CDS | 40.0% | |
TAGATTCAATTAGCCGCAAG+GGG | + | chr3_1:76699368-76699387 | None:intergenic | 40.0% | |
ATTTGCCATATAGCTCAACC+AGG | - | chr3_1:76699620-76699639 | Msa0376600:five_prime_UTR | 40.0% | |
TTTAAAGGAAATCCCACTCC+TGG | + | chr3_1:76699641-76699660 | None:intergenic | 40.0% | |
TCCATCTTCATCTCACCCAT+CGG | + | chr3_1:76696004-76696023 | None:intergenic | 45.0% | |
! | GAAACGAAAGCGTACTTGGT+CGG | + | chr3_1:76696095-76696114 | None:intergenic | 45.0% |
TGTTCAGGAGCTTGTCAAGA+AGG | - | chr3_1:76696174-76696193 | Msa0376600:three_prime_UTR | 45.0% | |
GTTCAGGAGCTTGTCAAGAA+GGG | - | chr3_1:76696175-76696194 | Msa0376600:three_prime_UTR | 45.0% | |
! | GGTTGTGCTGATATCCTCTT+TGG | + | chr3_1:76696266-76696285 | None:intergenic | 45.0% |
AACCGATCTCAAGTACATCC+TGG | - | chr3_1:76696282-76696301 | Msa0376600:CDS | 45.0% | |
!! | TTGTTTTGCTGATAGCCGCA+CGG | - | chr3_1:76696474-76696493 | Msa0376600:intron | 45.0% |
AGAAACCGAATGCTGAAGCT+TGG | - | chr3_1:76696569-76696588 | Msa0376600:intron | 45.0% | |
GAAACCGAATGCTGAAGCTT+GGG | - | chr3_1:76696570-76696589 | Msa0376600:intron | 45.0% | |
AAACCGAATGCTGAAGCTTG+GGG | - | chr3_1:76696571-76696590 | Msa0376600:intron | 45.0% | |
! | GAGATGTTTGGTAGCTTCCA+TGG | - | chr3_1:76696667-76696686 | Msa0376600:intron | 45.0% |
!! | ATCATGAACCATCGGTTCCA+TGG | + | chr3_1:76696687-76696706 | None:intergenic | 45.0% |
CAAGATAATACGGCACCTGA+GGG | + | chr3_1:76697118-76697137 | None:intergenic | 45.0% | |
! | TCTCACCTTCAGTTTTGCCT+GGG | + | chr3_1:76697195-76697214 | None:intergenic | 45.0% |
GTGAGAGCTGATCTGTTGAA+AGG | - | chr3_1:76697209-76697228 | Msa0376600:intron | 45.0% | |
!! | AGTGTTGAATTGGGTGTTGG+GGG | + | chr3_1:76697244-76697263 | None:intergenic | 45.0% |
! | CTCTGATCAGCAACAGCTTT+TGG | + | chr3_1:76697422-76697441 | None:intergenic | 45.0% |
CAAAAGCTGTTGCTGATCAG+AGG | - | chr3_1:76697420-76697439 | Msa0376600:intron | 45.0% | |
TGACGGAGAAGAAGAAAGAG+AGG | - | chr3_1:76697774-76697793 | Msa0376600:intron | 45.0% | |
GGAGATGCTTTCTGCTGTAA+AGG | - | chr3_1:76698239-76698258 | Msa0376600:intron | 45.0% | |
! | TGGGGATCAGGAGTTTTCTA+AGG | - | chr3_1:76698631-76698650 | Msa0376600:intron | 45.0% |
GTGCCAAAAAAGCAGAAGCT+TGG | - | chr3_1:76698669-76698688 | Msa0376600:intron | 45.0% | |
AAGGTAGCACATGTGATTGG+TGG | + | chr3_1:76698737-76698756 | None:intergenic | 45.0% | |
TACCTTCGCTCAAGATGTTC+TGG | - | chr3_1:76698751-76698770 | Msa0376600:intron | 45.0% | |
TTCCAGAACATCTTGAGCGA+AGG | + | chr3_1:76698756-76698775 | None:intergenic | 45.0% | |
! | TTCGCTCAAGATGTTCTGGA+AGG | - | chr3_1:76698755-76698774 | Msa0376600:intron | 45.0% |
CTTTGTGGCCCAAATATCAG+TGG | + | chr3_1:76698821-76698840 | None:intergenic | 45.0% | |
!! | GGGCCACAAAGTTTTGTGAA+TGG | - | chr3_1:76698830-76698849 | Msa0376600:intron | 45.0% |
GCTTCCTCAATGCTCATAGT+GGG | + | chr3_1:76699136-76699155 | None:intergenic | 45.0% | |
TGCTTCCTCAATGCTCATAG+TGG | + | chr3_1:76699137-76699156 | None:intergenic | 45.0% | |
!! | ACTATGAGCATTGAGGAAGC+AGG | - | chr3_1:76699136-76699155 | Msa0376600:intron | 45.0% |
GAAGTTTAAGCCAGGTGAAG+AGG | - | chr3_1:76699246-76699265 | Msa0376600:intron | 45.0% | |
ACAGGATAGAGCTAGAGCTT+TGG | - | chr3_1:76699294-76699313 | Msa0376600:intron | 45.0% | |
!! | GAGCTAGAGCTTTGGATGAT+TGG | - | chr3_1:76699302-76699321 | Msa0376600:CDS | 45.0% |
TTGGAAGGATGATAATCCGC+GGG | - | chr3_1:76699321-76699340 | Msa0376600:CDS | 45.0% | |
AGGGGTAAGCTTCGAATTTC+CGG | + | chr3_1:76699350-76699369 | None:intergenic | 45.0% | |
AATTCGAAGCTTACCCCTTG+CGG | - | chr3_1:76699352-76699371 | Msa0376600:CDS | 45.0% | |
CATATAGCTCAACCAGGAGT+GGG | - | chr3_1:76699626-76699645 | Msa0376600:five_prime_UTR | 45.0% | |
TCCGATGGGTGAGATGAAGA+TGG | - | chr3_1:76696000-76696019 | Msa0376600:three_prime_UTR | 50.0% | |
GATGGGTGAGATGAAGATGG+AGG | - | chr3_1:76696003-76696022 | Msa0376600:three_prime_UTR | 50.0% | |
!! | TGTTCAAACAGCGCCGGTAA+CGG | + | chr3_1:76696034-76696053 | None:intergenic | 50.0% |
CTTGCTTGTTCAAACAGCGC+CGG | + | chr3_1:76696040-76696059 | None:intergenic | 50.0% | |
! | TGTTTTGCTGATAGCCGCAC+GGG | - | chr3_1:76696475-76696494 | Msa0376600:intron | 50.0% |
ATACTCATTCCCAACCCGTG+CGG | + | chr3_1:76696492-76696511 | None:intergenic | 50.0% | |
CAAGGCTGTGACACCATCTT+CGG | - | chr3_1:76696519-76696538 | Msa0376600:intron | 50.0% | |
CAACCCCAAGCTTCAGCATT+CGG | + | chr3_1:76696577-76696596 | None:intergenic | 50.0% | |
GCAAGATAATACGGCACCTG+AGG | + | chr3_1:76697119-76697138 | None:intergenic | 50.0% | |
! | ACCGATTCTAAAGGCTTCCC+AGG | - | chr3_1:76697175-76697194 | Msa0376600:intron | 50.0% |
!! | GCCTGGGAAGCCTTTAGAAT+CGG | + | chr3_1:76697179-76697198 | None:intergenic | 50.0% |
! | CTCTCACCTTCAGTTTTGCC+TGG | + | chr3_1:76697196-76697215 | None:intergenic | 50.0% |
!! | TTGAATTGGGTGTTGGGGGA+AGG | + | chr3_1:76697240-76697259 | None:intergenic | 50.0% |
! | ATTTTGTGAGGCGATGGAGC+TGG | - | chr3_1:76697358-76697377 | Msa0376600:CDS | 50.0% |
GGCAGGAGAGGAAGAACTAT+TGG | - | chr3_1:76697747-76697766 | Msa0376600:intron | 50.0% | |
!! | TGGCATGATGAGCATTGAGC+AGG | + | chr3_1:76698040-76698059 | None:intergenic | 50.0% |
CCTGATCCCCATCCTAAACA+TGG | + | chr3_1:76698622-76698641 | None:intergenic | 50.0% | |
! | CCATGTTTAGGATGGGGATC+AGG | - | chr3_1:76698619-76698638 | Msa0376600:intron | 50.0% |
GCACATGTGATTGGTGGAGA+TGG | + | chr3_1:76698731-76698750 | None:intergenic | 50.0% | |
GCGAAGGTAGCACATGTGAT+TGG | + | chr3_1:76698740-76698759 | None:intergenic | 50.0% | |
TTTGTGTTCGTGTGCTTGCG+AGG | + | chr3_1:76698792-76698811 | None:intergenic | 50.0% | |
GTGGCCCAAATATCAGTGGT+TGG | + | chr3_1:76698817-76698836 | None:intergenic | 50.0% | |
AGGTCTTCCAACCCAGTCAT+AGG | - | chr3_1:76698888-76698907 | Msa0376600:intron | 50.0% | |
! | GATGCCCACTATGAGCATTG+AGG | - | chr3_1:76699129-76699148 | Msa0376600:intron | 50.0% |
GTTTAAGCCAGGTGAAGAGG+AGG | - | chr3_1:76699249-76699268 | Msa0376600:intron | 50.0% | |
TGAAGATGACGATGCTGCAC+AGG | - | chr3_1:76699276-76699295 | Msa0376600:intron | 50.0% | |
TGGAAGGATGATAATCCGCG+GGG | - | chr3_1:76699322-76699341 | Msa0376600:CDS | 50.0% | |
CCACTCCTGGTTGAGCTATA+TGG | + | chr3_1:76699628-76699647 | None:intergenic | 50.0% | |
CCATATAGCTCAACCAGGAG+TGG | - | chr3_1:76699625-76699644 | Msa0376600:five_prime_UTR | 50.0% | |
GATGGAGGACATGCCGTTAC+CGG | - | chr3_1:76696018-76696037 | Msa0376600:three_prime_UTR | 55.0% | |
CGGCGCTGTTTGAACAAGCA+AGG | - | chr3_1:76696038-76696057 | Msa0376600:three_prime_UTR | 55.0% | |
AAAGCGTACTTGGTCGGCAC+CGG | + | chr3_1:76696089-76696108 | None:intergenic | 55.0% | |
GCTTGTCAAGAAGGGATGCG+AGG | - | chr3_1:76696183-76696202 | Msa0376600:three_prime_UTR | 55.0% | |
!! | CGAAGATGGTGTCACAGCCT+TGG | + | chr3_1:76696521-76696540 | None:intergenic | 55.0% |
GGTAGCTTCCATGGAACCGA+TGG | - | chr3_1:76696676-76696695 | Msa0376600:intron | 55.0% | |
GGCTTCCCAGGCAAAACTGA+AGG | - | chr3_1:76697187-76697206 | Msa0376600:intron | 55.0% | |
GATGGAGCTGGTCCCAAAAG+AGG | - | chr3_1:76697370-76697389 | Msa0376600:CDS | 55.0% | |
TGCTGATCAGAGGGCCAGAA+AGG | - | chr3_1:76697430-76697449 | Msa0376600:intron | 55.0% | |
TTCCTCTCCTGCCTCAACAG+GGG | + | chr3_1:76697740-76697759 | None:intergenic | 55.0% | |
CTTCCTCTCCTGCCTCAACA+GGG | + | chr3_1:76697741-76697760 | None:intergenic | 55.0% | |
TCTTCCTCTCCTGCCTCAAC+AGG | + | chr3_1:76697742-76697761 | None:intergenic | 55.0% | |
GAGAGCAAGAATGGCAGCTC+AGG | - | chr3_1:76698868-76698887 | Msa0376600:intron | 55.0% | |
TAAGCCAGGTGAAGAGGAGG+AGG | - | chr3_1:76699252-76699271 | Msa0376600:intron | 55.0% | |
TCATCCTCCTCCTCTTCACC+TGG | + | chr3_1:76699259-76699278 | None:intergenic | 55.0% | |
TTGCTGATAGCCGCACGGGT+TGG | - | chr3_1:76696479-76696498 | Msa0376600:intron | 60.0% | |
TGCTGATAGCCGCACGGGTT+GGG | - | chr3_1:76696480-76696499 | Msa0376600:intron | 60.0% | |
AACGAGCGAAAGGAACGGCG+TGG | - | chr3_1:76697685-76697704 | Msa0376600:intron | 60.0% | |
ACGAGCGAAAGGAACGGCGT+GGG | - | chr3_1:76697686-76697705 | Msa0376600:intron | 60.0% | |
TGCCTCAACAGGGGTGGACA+GGG | + | chr3_1:76697731-76697750 | None:intergenic | 60.0% | |
GATGATAATCCGCGGGGTGC+CGG | - | chr3_1:76699328-76699347 | Msa0376600:CDS | 60.0% | |
TTCGAATTTCCGGCACCCCG+CGG | + | chr3_1:76699340-76699359 | None:intergenic | 60.0% | |
! | TTGGTCGGCACCGGACTCAG+TGG | + | chr3_1:76696080-76696099 | None:intergenic | 65.0% |
TGCCCTGTCCACCCCTGTTG+AGG | - | chr3_1:76697726-76697745 | Msa0376600:intron | 65.0% | |
CTGCCTCAACAGGGGTGGAC+AGG | + | chr3_1:76697732-76697751 | None:intergenic | 65.0% | |
CTGTCCACCCCTGTTGAGGC+AGG | - | chr3_1:76697730-76697749 | Msa0376600:intron | 65.0% | |
CTCTCCTGCCTCAACAGGGG+TGG | + | chr3_1:76697737-76697756 | None:intergenic | 65.0% | |
CACCCCTGTTGAGGCAGGAG+AGG | - | chr3_1:76697735-76697754 | Msa0376600:intron | 65.0% | |
CACGCCACCGCCACTGAGTC+CGG | - | chr3_1:76696067-76696086 | Msa0376600:three_prime_UTR | 70.0% | |
! | GTCGGCACCGGACTCAGTGG+CGG | + | chr3_1:76696077-76696096 | None:intergenic | 70.0% |
CGGACTCAGTGGCGGTGGCG+TGG | + | chr3_1:76696069-76696088 | None:intergenic | 75.0% | |
! | GGCACCGGACTCAGTGGCGG+TGG | + | chr3_1:76696074-76696093 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 76695928 | 76699671 | 76695928 | ID=Msa0376600;Name=Msa0376600 |
chr3_1 | mRNA | 76695928 | 76699671 | 76695928 | ID=Msa0376600-mRNA-1;Parent=Msa0376600;Name=Msa0376600-mRNA-1;_AED=0.13;_eAED=0.13;_QI=76|1|1|1|1|1|9|293|403 |
chr3_1 | exon | 76695928 | 76696470 | 76695928 | ID=Msa0376600-mRNA-1:exon:18297;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76696690 | 76696970 | 76696690 | ID=Msa0376600-mRNA-1:exon:18296;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76697324 | 76697395 | 76697324 | ID=Msa0376600-mRNA-1:exon:18295;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76697477 | 76697512 | 76697477 | ID=Msa0376600-mRNA-1:exon:18294;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76697804 | 76697965 | 76697804 | ID=Msa0376600-mRNA-1:exon:18293;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76698148 | 76698252 | 76698148 | ID=Msa0376600-mRNA-1:exon:18292;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76698391 | 76698477 | 76698391 | ID=Msa0376600-mRNA-1:exon:18291;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76699296 | 76699418 | 76699296 | ID=Msa0376600-mRNA-1:exon:18290;Parent=Msa0376600-mRNA-1 |
chr3_1 | exon | 76699500 | 76699671 | 76699500 | ID=Msa0376600-mRNA-1:exon:18289;Parent=Msa0376600-mRNA-1 |
chr3_1 | five_prime_UTR | 76699596 | 76699671 | 76699596 | ID=Msa0376600-mRNA-1:five_prime_utr;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76699500 | 76699595 | 76699500 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76699296 | 76699418 | 76699296 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76698391 | 76698477 | 76698391 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76698148 | 76698252 | 76698148 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76697804 | 76697965 | 76697804 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76697477 | 76697512 | 76697477 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76697324 | 76697395 | 76697324 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76696690 | 76696970 | 76696690 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | CDS | 76696221 | 76696470 | 76696221 | ID=Msa0376600-mRNA-1:cds;Parent=Msa0376600-mRNA-1 |
chr3_1 | three_prime_UTR | 76695928 | 76696220 | 76695928 | ID=Msa0376600-mRNA-1:three_prime_utr;Parent=Msa0376600-mRNA-1 |
Gene Sequence |
Protein sequence |