Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096700 | XP_003588988.1 | 95.184 | 353 | 0 | 1 | 41 | 376 | 3 | 355 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096700 | sp|Q8H1Q2|NBP35_ARATH | 74.000 | 350 | 71 | 3 | 41 | 372 | 3 | 350 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096700 | A0A396JFU3 | 94.915 | 354 | 0 | 1 | 41 | 376 | 3 | 356 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001520 | Msa0096700 | 0.803034 | 4.227174e-49 | -8.615850e-47 |
| Msa0003630 | Msa0096700 | 0.815623 | 8.407365e-52 | -8.615850e-47 |
| Msa0005270 | Msa0096700 | 0.815320 | 9.822881e-52 | -8.615850e-47 |
| Msa0015090 | Msa0096700 | 0.857154 | 1.980618e-62 | -8.615850e-47 |
| Msa0017320 | Msa0096700 | 0.819553 | 1.093429e-52 | -8.615850e-47 |
| Msa0020410 | Msa0096700 | 0.810288 | 1.241849e-50 | -8.615850e-47 |
| Msa0026910 | Msa0096700 | 0.814216 | 1.724649e-51 | -8.615850e-47 |
| Msa0029260 | Msa0096700 | 0.817053 | 4.026287e-52 | -8.615850e-47 |
| Msa0030300 | Msa0096700 | 0.803603 | 3.222219e-49 | -8.615850e-47 |
| Msa0034970 | Msa0096700 | 0.802440 | 5.606029e-49 | -8.615850e-47 |
| Msa0037880 | Msa0096700 | 0.803127 | 4.043188e-49 | -8.615850e-47 |
| Msa0043980 | Msa0096700 | 0.834674 | 2.615261e-56 | -8.615850e-47 |
| Msa0049750 | Msa0096700 | 0.864406 | 1.244600e-64 | -8.615850e-47 |
| Msa0051740 | Msa0096700 | 0.806161 | 9.410132e-50 | -8.615850e-47 |
| Msa0051750 | Msa0096700 | 0.821901 | 3.154768e-53 | -8.615850e-47 |
| Msa0052860 | Msa0096700 | 0.829043 | 6.417476e-55 | -8.615850e-47 |
| Msa0055640 | Msa0096700 | 0.809573 | 1.770326e-50 | -8.615850e-47 |
| Msa0056030 | Msa0096700 | 0.800367 | 1.489822e-48 | -8.615850e-47 |
| Msa0058310 | Msa0096700 | 0.822131 | 2.791268e-53 | -8.615850e-47 |
| Msa0059890 | Msa0096700 | 0.813198 | 2.890530e-51 | -8.615850e-47 |
| Msa0071250 | Msa0096700 | 0.840747 | 7.218723e-58 | -8.615850e-47 |
| Msa0074750 | Msa0096700 | 0.830764 | 2.443411e-55 | -8.615850e-47 |
| Msa0077900 | Msa0096700 | 0.801358 | 9.348183e-49 | -8.615850e-47 |
| Msa0079230 | Msa0096700 | 0.811245 | 7.709171e-51 | -8.615850e-47 |
| Msa0079260 | Msa0096700 | 0.835105 | 2.036496e-56 | -8.615850e-47 |
| Msa0084430 | Msa0096700 | 0.817294 | 3.552484e-52 | -8.615850e-47 |
| Msa0090550 | Msa0096700 | 0.841990 | 3.398350e-58 | -8.615850e-47 |
| Msa0096700 | Msa0098930 | 0.931667 | 2.690867e-94 | -8.615850e-47 |
| Msa0096700 | Msa0098990 | 0.974011 | 2.070451e-137 | -8.615850e-47 |
| Msa0096700 | Msa0106850 | 0.800923 | 1.147771e-48 | -8.615850e-47 |
| Msa0096700 | Msa0111080 | 0.830084 | 3.584122e-55 | -8.615850e-47 |
| Msa0096700 | Msa0124550 | 0.814239 | 1.704880e-51 | -8.615850e-47 |
| Msa0096700 | Msa0130520 | 0.805323 | 1.410905e-49 | -8.615850e-47 |
| Msa0096700 | Msa0131700 | 0.812311 | 4.519828e-51 | -8.615850e-47 |
| Msa0096700 | Msa0137570 | 0.802607 | 5.178672e-49 | -8.615850e-47 |
| Msa0096700 | Msa0138020 | 0.830536 | 2.778555e-55 | -8.615850e-47 |
| Msa0096700 | Msa0138640 | 0.822443 | 2.362581e-53 | -8.615850e-47 |
| Msa0096700 | Msa0142500 | 0.807842 | 4.149469e-50 | -8.615850e-47 |
| Msa0096700 | Msa0145740 | 0.803339 | 3.655353e-49 | -8.615850e-47 |
| Msa0096700 | Msa0150230 | 0.800096 | 1.691343e-48 | -8.615850e-47 |
| Msa0096700 | Msa0154920 | 0.818258 | 2.153219e-52 | -8.615850e-47 |
| Msa0096700 | Msa0169300 | 0.816483 | 5.402437e-52 | -8.615850e-47 |
| Msa0096700 | Msa0171980 | 0.807170 | 5.762042e-50 | -8.615850e-47 |
| Msa0096700 | Msa0172000 | 0.841729 | 3.982395e-58 | -8.615850e-47 |
| Msa0096700 | Msa0183870 | 0.813132 | 2.988125e-51 | -8.615850e-47 |
| Msa0096700 | Msa0186950 | 0.825912 | 3.619471e-54 | -8.615850e-47 |
| Msa0096700 | Msa0187490 | 0.849494 | 3.120153e-60 | -8.615850e-47 |
| Msa0096700 | Msa0189030 | 0.824507 | 7.774205e-54 | -8.615850e-47 |
| Msa0096700 | Msa0190250 | 0.809783 | 1.595318e-50 | -8.615850e-47 |
| Msa0096700 | Msa0196670 | 0.812814 | 3.507255e-51 | -8.615850e-47 |
| Msa0096700 | Msa0197610 | 0.848121 | 7.499999e-60 | -8.615850e-47 |
| Msa0096700 | Msa0206010 | 0.831959 | 1.241490e-55 | -8.615850e-47 |
| Msa0096700 | Msa0207030 | 0.828142 | 1.059563e-54 | -8.615850e-47 |
| Msa0096700 | Msa0217680 | 0.825763 | 3.925748e-54 | -8.615850e-47 |
| Msa0096700 | Msa0223120 | 0.803682 | 3.102198e-49 | -8.615850e-47 |
| Msa0096700 | Msa0233370 | 0.831438 | 1.669197e-55 | -8.615850e-47 |
| Msa0096700 | Msa0241140 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0096700 | Msa0244970 | 0.825068 | 5.734628e-54 | -8.615850e-47 |
| Msa0096700 | Msa0244980 | 0.820954 | 5.219254e-53 | -8.615850e-47 |
| Msa0096700 | Msa0257500 | 0.825432 | 4.703583e-54 | -8.615850e-47 |
| Msa0096700 | Msa0261720 | 0.804585 | 2.012748e-49 | -8.615850e-47 |
| Msa0096700 | Msa0262370 | 0.840631 | 7.741325e-58 | -8.615850e-47 |
| Msa0096700 | Msa0265150 | 0.803501 | 3.383068e-49 | -8.615850e-47 |
| Msa0096700 | Msa0269560 | 0.800346 | 1.504853e-48 | -8.615850e-47 |
| Msa0096700 | Msa0278580 | 0.801688 | 7.999749e-49 | -8.615850e-47 |
| Msa0096700 | Msa0284450 | 0.812229 | 4.709671e-51 | -8.615850e-47 |
| Msa0096700 | Msa0285330 | 0.846315 | 2.346668e-59 | -8.615850e-47 |
| Msa0096700 | Msa0286670 | 0.816385 | 5.683016e-52 | -8.615850e-47 |
| Msa0096700 | Msa0287410 | 0.821092 | 4.852189e-53 | -8.615850e-47 |
| Msa0096700 | Msa0290760 | 0.807282 | 5.455442e-50 | -8.615850e-47 |
| Msa0096700 | Msa0296050 | -0.812362 | 4.403990e-51 | -8.615850e-47 |
| Msa0096700 | Msa0296920 | 0.802924 | 4.453465e-49 | -8.615850e-47 |
| Msa0096700 | Msa0299580 | 0.800105 | 1.684575e-48 | -8.615850e-47 |
| Msa0096700 | Msa0300150 | 0.868583 | 5.861102e-66 | -8.615850e-47 |
| Msa0096700 | Msa0303460 | 0.805036 | 1.620355e-49 | -8.615850e-47 |
| Msa0096700 | Msa0303520 | 0.800811 | 1.209889e-48 | -8.615850e-47 |
| Msa0096700 | Msa0307560 | 0.829712 | 4.414501e-55 | -8.615850e-47 |
| Msa0096700 | Msa0308440 | 0.838351 | 3.027764e-57 | -8.615850e-47 |
| Msa0096700 | Msa0309270 | 0.821572 | 3.759106e-53 | -8.615850e-47 |
| Msa0096700 | Msa0311720 | 0.816411 | 5.606090e-52 | -8.615850e-47 |
| Msa0096700 | Msa0317960 | 0.805637 | 1.212635e-49 | -8.615850e-47 |
| Msa0096700 | Msa0321690 | 0.839010 | 2.046090e-57 | -8.615850e-47 |
| Msa0096700 | Msa0324240 | 0.813354 | 2.671359e-51 | -8.615850e-47 |
| Msa0096700 | Msa0326110 | 0.841176 | 5.568482e-58 | -8.615850e-47 |
| Msa0096700 | Msa0326750 | 0.808238 | 3.417297e-50 | -8.615850e-47 |
| Msa0096700 | Msa0333970 | -0.811762 | 5.954049e-51 | -8.615850e-47 |
| Msa0096700 | Msa0335060 | 0.810084 | 1.374211e-50 | -8.615850e-47 |
| Msa0096700 | Msa0337590 | 0.815400 | 9.425597e-52 | -8.615850e-47 |
| Msa0096700 | Msa0341890 | 0.810877 | 9.263674e-51 | -8.615850e-47 |
| Msa0096700 | Msa0363640 | 0.802073 | 6.670989e-49 | -8.615850e-47 |
| Msa0096700 | Msa0366210 | 0.807843 | 4.147129e-50 | -8.615850e-47 |
| Msa0096700 | Msa0376600 | 0.845433 | 4.073448e-59 | -8.615850e-47 |
| Msa0096700 | Msa0376910 | 0.830307 | 3.161317e-55 | -8.615850e-47 |
| Msa0096700 | Msa0380100 | 0.808652 | 2.787856e-50 | -8.615850e-47 |
| Msa0096700 | Msa0381000 | 0.818405 | 1.993969e-52 | -8.615850e-47 |
| Msa0096700 | Msa0381080 | 0.824272 | 8.831792e-54 | -8.615850e-47 |
| Msa0096700 | Msa0385490 | 0.834413 | 3.041034e-56 | -8.615850e-47 |
| Msa0096700 | Msa0387050 | 0.822018 | 2.965085e-53 | -8.615850e-47 |
| Msa0096700 | Msa0388700 | 0.806141 | 9.500165e-50 | -8.615850e-47 |
| Msa0096700 | Msa0392270 | 0.819308 | 1.243247e-52 | -8.615850e-47 |
| Msa0096700 | Msa0403490 | 0.830730 | 2.490743e-55 | -8.615850e-47 |
| Msa0096700 | Msa0403770 | 0.800420 | 1.453320e-48 | -8.615850e-47 |
| Msa0096700 | Msa0412840 | 0.804455 | 2.142140e-49 | -8.615850e-47 |
| Msa0096700 | Msa0420820 | 0.800685 | 1.283652e-48 | -8.615850e-47 |
| Msa0096700 | Msa0427580 | 0.858210 | 9.630111e-63 | -8.615850e-47 |
| Msa0096700 | Msa0430060 | 0.802447 | 5.587190e-49 | -8.615850e-47 |
| Msa0096700 | Msa0430150 | 0.800258 | 1.568338e-48 | -8.615850e-47 |
| Msa0096700 | Msa0430870 | 0.806837 | 6.775226e-50 | -8.615850e-47 |
| Msa0096700 | Msa0435220 | 0.804239 | 2.376718e-49 | -8.615850e-47 |
| Msa0096700 | Msa0436190 | 0.817168 | 3.791938e-52 | -8.615850e-47 |
| Msa0096700 | Msa0442610 | 0.814656 | 1.378797e-51 | -8.615850e-47 |
| Msa0096700 | Msa0458640 | 0.807424 | 5.089294e-50 | -8.615850e-47 |
| Msa0096700 | Msa0467780 | 0.817274 | 3.589767e-52 | -8.615850e-47 |
| Msa0096700 | Msa0471900 | 0.832492 | 9.167501e-56 | -8.615850e-47 |
| Msa0096700 | Msa0481030 | 0.826267 | 2.979904e-54 | -8.615850e-47 |
| Msa0096700 | Msa0481280 | 0.870524 | 1.367362e-66 | -8.615850e-47 |
| Msa0096700 | Msa0482940 | 0.821846 | 3.249346e-53 | -8.615850e-47 |
| Msa0096700 | Msa0500470 | 0.812784 | 3.561115e-51 | -8.615850e-47 |
| Msa0096700 | Msa0502090 | 0.854341 | 1.312720e-61 | -8.615850e-47 |
| Msa0096700 | Msa0514180 | 0.812122 | 4.969860e-51 | -8.615850e-47 |
| Msa0096700 | Msa0518170 | 0.828239 | 1.004051e-54 | -8.615850e-47 |
| Msa0096700 | Msa0523050 | 0.824617 | 7.325829e-54 | -8.615850e-47 |
| Msa0096700 | Msa0530290 | 0.828384 | 9.264547e-55 | -8.615850e-47 |
| Msa0096700 | Msa0530650 | 0.803341 | 3.650482e-49 | -8.615850e-47 |
| Msa0096700 | Msa0534410 | 0.808733 | 2.679424e-50 | -8.615850e-47 |
| Msa0096700 | Msa0542090 | 0.806056 | 9.899135e-50 | -8.615850e-47 |
| Msa0096700 | Msa0542130 | 0.806877 | 6.643610e-50 | -8.615850e-47 |
| Msa0096700 | Msa0555640 | 0.821108 | 4.810229e-53 | -8.615850e-47 |
| Msa0096700 | Msa0556860 | 0.800865 | 1.179473e-48 | -8.615850e-47 |
| Msa0096700 | Msa0566350 | 0.838133 | 3.445501e-57 | -8.615850e-47 |
| Msa0096700 | Msa0566750 | 0.826014 | 3.423023e-54 | -8.615850e-47 |
| Msa0096700 | Msa0569780 | 0.807064 | 6.065919e-50 | -8.615850e-47 |
| Msa0096700 | Msa0588240 | 0.851098 | 1.107326e-60 | -8.615850e-47 |
| Msa0096700 | Msa0600080 | 0.801211 | 1.001922e-48 | -8.615850e-47 |
| Msa0096700 | Msa0608710 | 0.805841 | 1.098711e-49 | -8.615850e-47 |
| Msa0096700 | Msa0610130 | 0.825261 | 5.163332e-54 | -8.615850e-47 |
| Msa0096700 | Msa0610180 | 0.823131 | 1.633643e-53 | -8.615850e-47 |
| Msa0096700 | Msa0618950 | 0.818012 | 2.447020e-52 | -8.615850e-47 |
| Msa0096700 | Msa0618970 | 0.819318 | 1.236692e-52 | -8.615850e-47 |
| Msa0096700 | Msa0620330 | 0.813977 | 1.947643e-51 | -8.615850e-47 |
| Msa0096700 | Msa0621600 | 0.809032 | 2.311657e-50 | -8.615850e-47 |
| Msa0096700 | Msa0626940 | 0.803600 | 3.226098e-49 | -8.615850e-47 |
| Msa0096700 | Msa0627350 | 0.803552 | 3.300893e-49 | -8.615850e-47 |
| Msa0096700 | Msa0628290 | 0.813758 | 2.176445e-51 | -8.615850e-47 |
| Msa0096700 | Msa0628740 | 0.822063 | 2.895000e-53 | -8.615850e-47 |
| Msa0096700 | Msa0643320 | 0.802481 | 5.497757e-49 | -8.615850e-47 |
| Msa0096700 | Msa0654620 | 0.844803 | 6.027341e-59 | -8.615850e-47 |
| Msa0096700 | Msa0657120 | 0.803219 | 3.869283e-49 | -8.615850e-47 |
| Msa0096700 | Msa0657460 | -0.800647 | 1.306635e-48 | -8.615850e-47 |
| Msa0096700 | Msa0658680 | 0.821167 | 4.662723e-53 | -8.615850e-47 |
| Msa0096700 | Msa0665080 | 0.801869 | 7.347152e-49 | -8.615850e-47 |
| Msa0096700 | Msa0666140 | 0.824650 | 7.196775e-54 | -8.615850e-47 |
| Msa0096700 | Msa0672550 | 0.827532 | 1.484888e-54 | -8.615850e-47 |
| Msa0096700 | Msa0673470 | 0.819589 | 1.072824e-52 | -8.615850e-47 |
| Msa0096700 | Msa0679550 | 0.811781 | 5.897314e-51 | -8.615850e-47 |
| Msa0096700 | Msa0683140 | 0.813879 | 2.047230e-51 | -8.615850e-47 |
| Msa0096700 | Msa0686080 | 0.802326 | 5.916970e-49 | -8.615850e-47 |
| Msa0096700 | Msa0698360 | 0.800798 | 1.217288e-48 | -8.615850e-47 |
| Msa0096700 | Msa0698410 | 0.822181 | 2.717525e-53 | -8.615850e-47 |
| Msa0096700 | Msa0701100 | 0.823334 | 1.464732e-53 | -8.615850e-47 |
| Msa0096700 | Msa0702370 | 0.825628 | 4.225541e-54 | -8.615850e-47 |
| Msa0096700 | Msa0702550 | 0.810268 | 1.254340e-50 | -8.615850e-47 |
| Msa0096700 | Msa0703910 | 0.831142 | 1.973370e-55 | -8.615850e-47 |
| Msa0096700 | Msa0705390 | 0.816244 | 6.111251e-52 | -8.615850e-47 |
| Msa0096700 | Msa0705990 | 0.834575 | 2.768216e-56 | -8.615850e-47 |
| Msa0096700 | Msa0709160 | 0.845313 | 4.391247e-59 | -8.615850e-47 |
| Msa0096700 | Msa0711100 | 0.800261 | 1.565563e-48 | -8.615850e-47 |
| Msa0096700 | Msa0711780 | 0.806222 | 9.132729e-50 | -8.615850e-47 |
| Msa0096700 | Msa0724170 | 0.818792 | 1.629349e-52 | -8.615850e-47 |
| Msa0096700 | Msa0726080 | 0.827011 | 1.979736e-54 | -8.615850e-47 |
| Msa0096700 | Msa0731180 | 0.810627 | 1.049467e-50 | -8.615850e-47 |
| Msa0096700 | Msa0742390 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa0096700 | Msa0749440 | 0.820673 | 6.056150e-53 | -8.615850e-47 |
| Msa0096700 | Msa0750850 | 0.831121 | 1.997785e-55 | -8.615850e-47 |
| Msa0096700 | Msa0751850 | 0.801162 | 1.025509e-48 | -8.615850e-47 |
| Msa0096700 | Msa0760350 | 0.807328 | 5.334604e-50 | -8.615850e-47 |
| Msa0096700 | Msa0763890 | 0.817350 | 3.451917e-52 | -8.615850e-47 |
| Msa0096700 | Msa0763920 | 0.815932 | 7.176242e-52 | -8.615850e-47 |
| Msa0096700 | Msa0764920 | 0.823570 | 1.289893e-53 | -8.615850e-47 |
| Msa0096700 | Msa0765180 | 0.877125 | 8.075030e-69 | -8.615850e-47 |
| Msa0096700 | Msa0771580 | 0.800879 | 1.171341e-48 | -8.615850e-47 |
| Msa0096700 | Msa0773590 | 0.807712 | 4.420518e-50 | -8.615850e-47 |
| Msa0096700 | Msa0786070 | 0.802143 | 6.453201e-49 | -8.615850e-47 |
| Msa0096700 | Msa0788540 | 0.804770 | 1.841988e-49 | -8.615850e-47 |
| Msa0096700 | Msa0801730 | 0.821795 | 3.339329e-53 | -8.615850e-47 |
| Msa0096700 | Msa0811040 | 0.811068 | 8.422672e-51 | -8.615850e-47 |
| Msa0096700 | Msa0812950 | 0.820834 | 5.561989e-53 | -8.615850e-47 |
| Msa0096700 | Msa0830540 | 0.821132 | 4.750198e-53 | -8.615850e-47 |
| Msa0096700 | Msa0831850 | 0.811758 | 5.965331e-51 | -8.615850e-47 |
| Msa0096700 | Msa0832150 | 0.815152 | 1.070085e-51 | -8.615850e-47 |
| Msa0096700 | Msa0842770 | 0.812846 | 3.452006e-51 | -8.615850e-47 |
| Msa0096700 | Msa0844110 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
| Msa0096700 | Msa0844610 | 0.840848 | 6.791655e-58 | -8.615850e-47 |
| Msa0096700 | Msa0846230 | 0.830817 | 2.371545e-55 | -8.615850e-47 |
| Msa0096700 | Msa0847470 | 0.835485 | 1.632998e-56 | -8.615850e-47 |
| Msa0096700 | Msa0861470 | 0.828257 | 9.942716e-55 | -8.615850e-47 |
| Msa0096700 | Msa0861570 | 0.834602 | 2.726242e-56 | -8.615850e-47 |
| Msa0096700 | Msa0869120 | 0.809834 | 1.555479e-50 | -8.615850e-47 |
| Msa0096700 | Msa0880040 | 0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0096700 | Msa0880810 | 0.825022 | 5.878488e-54 | -8.615850e-47 |
| Msa0096700 | Msa0930140 | 0.813807 | 2.123171e-51 | -8.615850e-47 |
| Msa0096700 | Msa0932570 | 0.821776 | 3.373779e-53 | -8.615850e-47 |
| Msa0096700 | Msa0958030 | 0.817094 | 3.940625e-52 | -8.615850e-47 |
| Msa0096700 | Msa0958920 | 0.828941 | 6.796100e-55 | -8.615850e-47 |
| Msa0096700 | Msa0970530 | 0.845355 | 4.276650e-59 | -8.615850e-47 |
| Msa0096700 | Msa0970600 | 0.849229 | 3.697024e-60 | -8.615850e-47 |
| Msa0096700 | Msa0980020 | 0.825575 | 4.349304e-54 | -8.615850e-47 |
| Msa0096700 | Msa0987370 | 0.809325 | 2.001279e-50 | -8.615850e-47 |
| Msa0096700 | Msa0992580 | 0.829268 | 5.660788e-55 | -8.615850e-47 |
| Msa0096700 | Msa0992600 | 0.809608 | 1.739713e-50 | -8.615850e-47 |
| Msa0096700 | Msa0994370 | 0.832551 | 8.860501e-56 | -8.615850e-47 |
| Msa0096700 | Msa1006730 | 0.821214 | 4.548872e-53 | -8.615850e-47 |
| Msa0096700 | Msa1024680 | 0.819141 | 1.357505e-52 | -8.615850e-47 |
| Msa0096700 | Msa1024750 | 0.831957 | 1.243583e-55 | -8.615850e-47 |
| Msa0096700 | Msa1026410 | 0.830425 | 2.957530e-55 | -8.615850e-47 |
| Msa0096700 | Msa1026640 | 0.839077 | 1.966231e-57 | -8.615850e-47 |
| Msa0096700 | Msa1036740 | 0.805910 | 1.062488e-49 | -8.615850e-47 |
| Msa0096700 | Msa1054510 | 0.812588 | 3.930683e-51 | -8.615850e-47 |
| Msa0096700 | Msa1063420 | 0.817923 | 2.563340e-52 | -8.615850e-47 |
| Msa0096700 | Msa1063510 | 0.812973 | 3.237681e-51 | -8.615850e-47 |
| Msa0096700 | Msa1065110 | 0.800501 | 1.399391e-48 | -8.615850e-47 |
| Msa0096700 | Msa1071320 | 0.842460 | 2.551997e-58 | -8.615850e-47 |
| Msa0096700 | Msa1077070 | 0.838827 | 2.281330e-57 | -8.615850e-47 |
| Msa0096700 | Msa1077340 | 0.822406 | 2.409057e-53 | -8.615850e-47 |
| Msa0096700 | Msa1081790 | -0.808697 | 2.726358e-50 | -8.615850e-47 |
| Msa0096700 | Msa1082250 | 0.823697 | 1.204421e-53 | -8.615850e-47 |
| Msa0096700 | Msa1084270 | 0.812025 | 5.217793e-51 | -8.615850e-47 |
| Msa0096700 | Msa1089320 | 0.802421 | 5.654362e-49 | -8.615850e-47 |
| Msa0096700 | Msa1093100 | 0.812648 | 3.813775e-51 | -8.615850e-47 |
| Msa0096700 | Msa1107200 | 0.801413 | 9.112696e-49 | -8.615850e-47 |
| Msa0096700 | Msa1107260 | 0.858392 | 8.500708e-63 | -8.615850e-47 |
| Msa0096700 | Msa1115280 | 0.824887 | 6.327890e-54 | -8.615850e-47 |
| Msa0096700 | Msa1122780 | 0.824016 | 1.014116e-53 | -8.615850e-47 |
| Msa0096700 | Msa1130530 | 0.818944 | 1.504489e-52 | -8.615850e-47 |
| Msa0096700 | Msa1140230 | 0.810285 | 1.243941e-50 | -8.615850e-47 |
| Msa0096700 | Msa1144040 | 0.857077 | 2.086756e-62 | -8.615850e-47 |
| Msa0096700 | Msa1144970 | 0.805498 | 1.296585e-49 | -8.615850e-47 |
| Msa0096700 | Msa1150900 | 0.851046 | 1.145297e-60 | -8.615850e-47 |
| Msa0096700 | Msa1152520 | 0.800049 | 1.729411e-48 | -8.615850e-47 |
| Msa0096700 | Msa1160590 | 0.814222 | 1.719339e-51 | -8.615850e-47 |
| Msa0096700 | Msa1163870 | 0.834176 | 3.486712e-56 | -8.615850e-47 |
| Msa0096700 | Msa1164020 | 0.803415 | 3.524207e-49 | -8.615850e-47 |
| Msa0096700 | Msa1166090 | -0.801814 | 7.537721e-49 | -8.615850e-47 |
| Msa0096700 | Msa1176360 | 0.811201 | 7.879777e-51 | -8.615850e-47 |
| Msa0096700 | Msa1181250 | 0.803653 | 3.145831e-49 | -8.615850e-47 |
| Msa0096700 | Msa1181330 | 0.804855 | 1.767884e-49 | -8.615850e-47 |
| Msa0096700 | Msa1185460 | 0.818231 | 2.183647e-52 | -8.615850e-47 |
| Msa0096700 | Msa1187590 | 0.818905 | 1.535373e-52 | -8.615850e-47 |
| Msa0096700 | Msa1205480 | 0.803648 | 3.153179e-49 | -8.615850e-47 |
| Msa0096700 | Msa1205590 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa0096700 | Msa1206100 | 0.804045 | 2.608175e-49 | -8.615850e-47 |
| Msa0096700 | Msa1207310 | 0.811473 | 6.878919e-51 | -8.615850e-47 |
| Msa0096700 | Msa1208370 | 0.846727 | 1.811546e-59 | -8.615850e-47 |
| Msa0096700 | Msa1208380 | 0.858873 | 6.109384e-63 | -8.615850e-47 |
| Msa0096700 | Msa1209190 | 0.828532 | 8.529964e-55 | -8.615850e-47 |
| Msa0096700 | Msa1209860 | 0.818757 | 1.659670e-52 | -8.615850e-47 |
| Msa0096700 | Msa1218580 | 0.827735 | 1.327563e-54 | -8.615850e-47 |
| Msa0096700 | Msa1233850 | 0.815750 | 7.876731e-52 | -8.615850e-47 |
| Msa0096700 | Msa1239400 | 0.800689 | 1.280738e-48 | -8.615850e-47 |
| Msa0096700 | Msa1250110 | 0.819429 | 1.167031e-52 | -8.615850e-47 |
| Msa0096700 | Msa1250730 | 0.810503 | 1.115999e-50 | -8.615850e-47 |
| Msa0096700 | Msa1259530 | 0.819721 | 1.000740e-52 | -8.615850e-47 |
| Msa0096700 | Msa1263290 | -0.803812 | 2.915817e-49 | -8.615850e-47 |
| Msa0096700 | Msa1267520 | 0.801697 | 7.966742e-49 | -8.615850e-47 |
| Msa0096700 | Msa1270660 | 0.854638 | 1.077086e-61 | -8.615850e-47 |
| Msa0096700 | Msa1270730 | 0.844576 | 6.940618e-59 | -8.615850e-47 |
| Msa0096700 | Msa1274510 | 0.832154 | 1.111696e-55 | -8.615850e-47 |
| Msa0096700 | Msa1276440 | 0.813706 | 2.234926e-51 | -8.615850e-47 |
| Msa0096700 | Msa1291450 | 0.816464 | 5.455639e-52 | -8.615850e-47 |
| Msa0096700 | Msa1295330 | 0.802329 | 5.906379e-49 | -8.615850e-47 |
| Msa0096700 | Msa1295930 | 0.859914 | 2.973186e-63 | -8.615850e-47 |
| Msa0096700 | Msa1307180 | 0.824537 | 7.647875e-54 | -8.615850e-47 |
| Msa0096700 | Msa1307740 | 0.800777 | 1.229105e-48 | -8.615850e-47 |
| Msa0096700 | Msa1315750 | 0.825346 | 4.928333e-54 | -8.615850e-47 |
| Msa0096700 | Msa1316360 | 0.831094 | 2.027892e-55 | -8.615850e-47 |
| Msa0096700 | Msa1329550 | 0.805734 | 1.157106e-49 | -8.615850e-47 |
| Msa0096700 | Msa1329800 | 0.801662 | 8.100571e-49 | -8.615850e-47 |
| Msa0096700 | Msa1331320 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
| Msa0096700 | Msa1332050 | 0.807886 | 4.060409e-50 | -8.615850e-47 |
| Msa0096700 | Msa1335230 | 0.832637 | 8.437437e-56 | -8.615850e-47 |
| Msa0096700 | Msa1336040 | 0.816347 | 5.794725e-52 | -8.615850e-47 |
| Msa0096700 | Msa1337170 | 0.814992 | 1.161684e-51 | -8.615850e-47 |
| Msa0096700 | Msa1340810 | 0.803114 | 4.067996e-49 | -8.615850e-47 |
| Msa0096700 | Msa1341490 | 0.819233 | 1.293509e-52 | -8.615850e-47 |
| Msa0096700 | Msa1344660 | 0.818696 | 1.712953e-52 | -8.615850e-47 |
| Msa0096700 | Msa1349450 | 0.809309 | 2.016698e-50 | -8.615850e-47 |
| Msa0096700 | Msa1351550 | 0.827134 | 1.849593e-54 | -8.615850e-47 |
| Msa0096700 | Msa1355890 | 0.807468 | 4.981480e-50 | -8.615850e-47 |
| Msa0096700 | Msa1364210 | 0.801122 | 1.045160e-48 | -8.615850e-47 |
| Msa0096700 | Msa1364370 | 0.832702 | 8.132154e-56 | -8.615850e-47 |
| Msa0096700 | Msa1370590 | 0.819206 | 1.311571e-52 | -8.615850e-47 |
| Msa0096700 | Msa1371240 | 0.852141 | 5.608140e-61 | -8.615850e-47 |
| Msa0096700 | Msa1371940 | 0.822044 | 2.924159e-53 | -8.615850e-47 |
| Msa0096700 | Msa1372290 | 0.805386 | 1.368679e-49 | -8.615850e-47 |
| Msa0096700 | Msa1372580 | 0.837621 | 4.666344e-57 | -8.615850e-47 |
| Msa0096700 | Msa1375580 | 0.803846 | 2.868779e-49 | -8.615850e-47 |
| Msa0096700 | Msa1376130 | 0.818272 | 2.137727e-52 | -8.615850e-47 |
| Msa0096700 | Msa1377570 | 0.814235 | 1.708159e-51 | -8.615850e-47 |
| Msa0096700 | Msa1382020 | 0.818005 | 2.455791e-52 | -8.615850e-47 |
| Msa0096700 | Msa1383740 | 0.812513 | 4.081546e-51 | -8.615850e-47 |
| Msa0096700 | Msa1384100 | 0.820650 | 6.133303e-53 | -8.615850e-47 |
| Msa0096700 | Msa1388860 | 0.817807 | 2.722742e-52 | -8.615850e-47 |
| Msa0096700 | Msa1397120 | 0.821801 | 3.327832e-53 | -8.615850e-47 |
| Msa0096700 | Msa1403890 | 0.820141 | 8.024197e-53 | -8.615850e-47 |
| Msa0096700 | Msa1407470 | 0.830185 | 3.386126e-55 | -8.615850e-47 |
| Msa0096700 | Msa1407600 | 0.819402 | 1.183632e-52 | -8.615850e-47 |
| Msa0096700 | Msa1407970 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0096700 | Msa1412070 | 0.841309 | 5.136760e-58 | -8.615850e-47 |
| Msa0096700 | Msa1419640 | 0.817270 | 3.596800e-52 | -8.615850e-47 |
| Msa0096700 | Msa1419870 | 0.811349 | 7.317697e-51 | -8.615850e-47 |
| Msa0096700 | Msa1423820 | 0.837597 | 4.732898e-57 | -8.615850e-47 |
| Msa0096700 | Msa1426570 | 0.805722 | 1.163466e-49 | -8.615850e-47 |
| Msa0096700 | Msa1428780 | 0.812300 | 4.543633e-51 | -8.615850e-47 |
| Msa0096700 | Msa1430130 | 0.813911 | 2.014072e-51 | -8.615850e-47 |
| Msa0096700 | Msa1432630 | 0.845208 | 4.688055e-59 | -8.615850e-47 |
| Msa0096700 | Msa1436600 | 0.827349 | 1.643353e-54 | -8.615850e-47 |
| Msa0096700 | Msa1437130 | 0.845111 | 4.978563e-59 | -8.615850e-47 |
| Msa0096700 | Msa1437330 | 0.838534 | 2.716515e-57 | -8.615850e-47 |
| Msa0096700 | Msa1438840 | 0.847999 | 8.105389e-60 | -8.615850e-47 |
| Msa0096700 | Msa1442790 | 0.829077 | 6.299496e-55 | -8.615850e-47 |
| Msa0096700 | Msa1444120 | 0.816196 | 6.263670e-52 | -8.615850e-47 |
| Msa0096700 | Msa1447890 | 0.804250 | 2.363838e-49 | -8.615850e-47 |
| Msa0096700 | Msa1450720 | 0.802313 | 5.952408e-49 | -8.615850e-47 |
| Msa0096700 | Msa1451150 | 0.811041 | 8.535782e-51 | -8.615850e-47 |
| Msa0096700 | Msa1458810 | 0.846743 | 1.792974e-59 | -8.615850e-47 |
| Msa0096700 | Msa1460750 | 0.812715 | 3.688428e-51 | -8.615850e-47 |
| Msa0096700 | Msa1463600 | 0.836664 | 8.194004e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096700 | MtrunA17_Chr1g0151421 | 94.915 | 354 | 0 | 1 | 41 | 376 | 3 | 356 | 0.0 | 677 |
| Msa0096700 | MtrunA17_Chr1g0153571 | 94.618 | 353 | 2 | 1 | 41 | 376 | 3 | 355 | 0.0 | 672 |
| Msa0096700 | MtrunA17_Chr1g0184451 | 34.564 | 298 | 143 | 10 | 75 | 364 | 17 | 270 | 1.12e-41 | 147 |
| Msa0096700 | MtrunA17_Chr6g0485031 | 40.000 | 180 | 103 | 3 | 76 | 255 | 173 | 347 | 5.73e-31 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0096700 | AT5G50960.1 | 74.000 | 350 | 71 | 3 | 41 | 372 | 3 | 350 | 0.0 | 528 |
| Msa0096700 | AT4G19540.1 | 43.005 | 193 | 100 | 5 | 75 | 264 | 38 | 223 | 7.37e-38 | 139 |
| Msa0096700 | AT3G24430.1 | 39.444 | 180 | 104 | 3 | 76 | 255 | 172 | 346 | 4.49e-31 | 124 |
Find 99 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGATTAAATTCAGCATTTC+AGG | 0.187756 | 1_3:+2376667 | None:intergenic |
| CCTTCTAGGCCAAGCATCTT+TGG | 0.224706 | 1_3:+2377168 | None:intergenic |
| TACATAAGGTTATTATTATA+AGG | 0.233405 | 1_3:-2376078 | Msa0096700:three_prime_UTR |
| GGTGTATCTCTTGACCTTCT+AGG | 0.281189 | 1_3:+2377154 | None:intergenic |
| ATAATTCTTTCAAACACTTC+TGG | 0.300011 | 1_3:+2376123 | None:intergenic |
| ATCCAGACGAAGCTGTTATA+TGG | 0.325193 | 1_3:-2377056 | Msa0096700:CDS |
| TTTATGAAGATTACAGATAA+TGG | 0.328286 | 1_3:-2376742 | Msa0096700:CDS |
| GAGATGGCGGTACCCTTTCT+TGG | 0.328779 | 1_3:-2376592 | Msa0096700:CDS |
| AATCTCGGGGTCATGTCAAT+TGG | 0.348522 | 1_3:-2377093 | Msa0096700:CDS |
| CTTCTAGGCCAAGCATCTTT+GGG | 0.359162 | 1_3:+2377169 | None:intergenic |
| CATACGTTCGTTGGCATCCT+CGG | 0.362541 | 1_3:+2380718 | None:intergenic |
| AAAGTTGGAGTGAAAGTTCT+TGG | 0.364693 | 1_3:-2376814 | Msa0096700:CDS |
| TTGAAAGCTATTTATACATA+AGG | 0.368274 | 1_3:-2376092 | Msa0096700:three_prime_UTR |
| TTTCACAGTGGCCATTCTTT+CGG | 0.375809 | 1_3:+2377323 | None:intergenic |
| CTAATTGTTGATGCTCCGCC+TGG | 0.377996 | 1_3:-2376964 | Msa0096700:CDS |
| CAGCTAACGCAAATGCCAGC+TGG | 0.379548 | 1_3:+2377244 | None:intergenic |
| CCAAAGATGCTTGGCCTAGA+AGG | 0.402010 | 1_3:-2377168 | Msa0096700:CDS |
| CCAAGCATCTTTGGGATGCT+TGG | 0.406720 | 1_3:+2377177 | None:intergenic |
| CTACAATGTCACAAACAAAC+TGG | 0.407779 | 1_3:+2376212 | None:intergenic |
| GTCTATGTTGAGTCTAATCT+CGG | 0.416769 | 1_3:-2377108 | Msa0096700:CDS |
| CACTGTGAAACATAAGATAC+TGG | 0.420840 | 1_3:-2377310 | Msa0096700:CDS |
| AAGTTGGAGTGAAAGTTCTT+GGG | 0.429446 | 1_3:-2376813 | Msa0096700:CDS |
| GGCGGTACCCTTTCTTGGTA+AGG | 0.430728 | 1_3:-2376587 | Msa0096700:CDS |
| CATAAGATACTGGTCTTGTC+AGG | 0.432544 | 1_3:-2377300 | Msa0096700:CDS |
| TAAAGGAACCTTACCAAGAA+AGG | 0.434925 | 1_3:+2376579 | None:intergenic |
| AGATGTTACGGAGTGGATAT+CGG | 0.437420 | 1_3:-2376710 | Msa0096700:CDS |
| ACTTGAGATTTGAGATGGGC+TGG | 0.443213 | 1_3:+2376764 | None:intergenic |
| AGCTAACGCAAATGCCAGCT+GGG | 0.447107 | 1_3:+2377245 | None:intergenic |
| GCAGAATCAGACTGAGGACC+TGG | 0.452269 | 1_3:+2380589 | None:intergenic |
| CTCCATATAACAGCTTCGTC+TGG | 0.454307 | 1_3:+2377054 | None:intergenic |
| CATAAACTTGAGATTTGAGA+TGG | 0.455458 | 1_3:+2376759 | None:intergenic |
| ATACGTTCGTTGGCATCCTC+GGG | 0.457202 | 1_3:+2380719 | None:intergenic |
| CGTCTACATTAGCAGCATCT+AGG | 0.458881 | 1_3:+2376908 | None:intergenic |
| CTTCTGGACATTGATATTTG+TGG | 0.463857 | 1_3:-2377201 | Msa0096700:CDS |
| AGAGAAGAGAAGAGCTTCCA+TGG | 0.467899 | 1_3:-2380759 | Msa0096700:CDS |
| ATCTCGGGGTCATGTCAATT+GGG | 0.470649 | 1_3:-2377092 | Msa0096700:CDS |
| CTTTGCAAGGCAGCCGAAGA+AGG | 0.473054 | 1_3:-2376547 | Msa0096700:CDS |
| TGGTGAGATGAAAGATGTTA+CGG | 0.483466 | 1_3:-2376722 | Msa0096700:CDS |
| GGTCCTCAGTCTGATTCTGC+TGG | 0.484126 | 1_3:-2380586 | Msa0096700:CDS |
| ATGTGTTCATCTGAGGTTCC+AGG | 0.485714 | 1_3:+2376946 | None:intergenic |
| GGCATTTGCGTTAGCTGCAA+GGG | 0.486589 | 1_3:-2377238 | Msa0096700:CDS |
| GAGACCAACCAAGGTTGCTC+TGG | 0.487893 | 1_3:+2377133 | None:intergenic |
| ACAATCTTTATCTGCAAAGC+AGG | 0.488362 | 1_3:+2376519 | None:intergenic |
| AAAGCAGGATCTGCCTTCTT+CGG | 0.495633 | 1_3:+2376534 | None:intergenic |
| GATTTGAGATGGGCTGGGAC+AGG | 0.504393 | 1_3:+2376770 | None:intergenic |
| TTGCAAAGCTGTGGATCTAA+AGG | 0.505094 | 1_3:+2376562 | None:intergenic |
| AAATATATTCATACGTTCGT+TGG | 0.505708 | 1_3:+2380709 | None:intergenic |
| GGTTGCCATTGCCGAAAGAA+TGG | 0.507040 | 1_3:-2377334 | Msa0096700:CDS |
| TATATCTCCGTTGTTCTCCA+TGG | 0.511044 | 1_3:+2380742 | None:intergenic |
| ATACTGGTCTTGTCAGGAAA+GGG | 0.511385 | 1_3:-2377294 | Msa0096700:CDS |
| CTTGAGATTTGAGATGGGCT+GGG | 0.511450 | 1_3:+2376765 | None:intergenic |
| GTATTTGATAGTAGCGGTGG+TGG | 0.514266 | 1_3:-2376634 | Msa0096700:CDS |
| AGTCATCGTCGTCACCCGCC+AGG | 0.519376 | 1_3:-2381037 | Msa0096700:intron |
| AAAGGAACCTTACCAAGAAA+GGG | 0.525559 | 1_3:+2376580 | None:intergenic |
| TGGCATTTGCGTTAGCTGCA+AGG | 0.531152 | 1_3:-2377239 | Msa0096700:CDS |
| CCAAGCATCCCAAAGATGCT+TGG | 0.531277 | 1_3:-2377177 | Msa0096700:CDS |
| TCTATGTTGAGTCTAATCTC+GGG | 0.532182 | 1_3:-2377107 | Msa0096700:CDS |
| GATAAGCTGATGGAAACTAG+TGG | 0.534659 | 1_3:-2376463 | Msa0096700:CDS |
| GAGATACACCAGAGCAACCT+TGG | 0.541471 | 1_3:-2377141 | Msa0096700:CDS |
| CTGGCATTTACAGATTGCCC+AGG | 0.541633 | 1_3:-2380607 | Msa0096700:intron |
| GATACTGGTCTTGTCAGGAA+AGG | 0.542244 | 1_3:-2377295 | Msa0096700:CDS |
| AGTGGCCATTCTTTCGGCAA+TGG | 0.546079 | 1_3:+2377329 | None:intergenic |
| TTGTCAGGAAAGGGAGGTGT+TGG | 0.547516 | 1_3:-2377285 | Msa0096700:CDS |
| TCGGCTGCCTTGCAAAGCTG+TGG | 0.547932 | 1_3:+2376553 | None:intergenic |
| TACACCAGAGCAACCTTGGT+TGG | 0.551299 | 1_3:-2377137 | Msa0096700:CDS |
| AGTTGGAGTGAAAGTTCTTG+GGG | 0.553652 | 1_3:-2376812 | Msa0096700:CDS |
| ATAACAGCTTCGTCTGGATG+AGG | 0.554608 | 1_3:+2377060 | None:intergenic |
| AGATTAGACTCAACATAGAC+AGG | 0.558926 | 1_3:+2377111 | None:intergenic |
| AATTGAAATGTGTTCATCTG+AGG | 0.559191 | 1_3:+2376939 | None:intergenic |
| ATAAACTTGAGATTTGAGAT+GGG | 0.559421 | 1_3:+2376760 | None:intergenic |
| AAAGATAATAGATAAGCTGA+TGG | 0.562227 | 1_3:-2376473 | Msa0096700:CDS |
| AACTAGTGGGCTGTCAATGA+CGG | 0.568788 | 1_3:-2376449 | Msa0096700:CDS |
| ACTATCAAATACTTCACTGC+AGG | 0.571986 | 1_3:+2376645 | None:intergenic |
| CTGTCAATGACGGAAAGCAA+TGG | 0.575375 | 1_3:-2376439 | Msa0096700:CDS |
| GACGAAGCTGTTATATGGAG+AGG | 0.584494 | 1_3:-2377051 | Msa0096700:CDS |
| TATCAGAAACAAACACCTGC+CGG | 0.594674 | 1_3:-2381060 | Msa0096700:CDS |
| ATAAGCTGATGGAAACTAGT+GGG | 0.602164 | 1_3:-2376462 | Msa0096700:CDS |
| TTTAGATCCACAGCTTTGCA+AGG | 0.603851 | 1_3:-2376560 | Msa0096700:CDS |
| GTTGAAGATGTGTAACGAGA+TGG | 0.614173 | 1_3:-2376608 | Msa0096700:CDS |
| CAGAATCAGACTGAGGACCT+GGG | 0.614924 | 1_3:+2380590 | None:intergenic |
| GCGGGTGACGACGATGACTC+CGG | 0.617264 | 1_3:+2381041 | None:intergenic |
| AAGAGAGACTTGTTGAGGAG+TGG | 0.628280 | 1_3:+2376870 | None:intergenic |
| GTGACGACGATGACTCCGGC+AGG | 0.628500 | 1_3:+2381045 | None:intergenic |
| AGATGAAAGATGTTACGGAG+TGG | 0.628653 | 1_3:-2376717 | Msa0096700:CDS |
| CTAGATGCTGCTAATGTAGA+CGG | 0.629983 | 1_3:-2376907 | Msa0096700:CDS |
| CTGGTCTTGTCAGGAAAGGG+AGG | 0.640582 | 1_3:-2377291 | Msa0096700:CDS |
| GAAGTATTTGATAGTAGCGG+TGG | 0.649921 | 1_3:-2376637 | Msa0096700:CDS |
| TCAATAAGAGAGACTTGTTG+AGG | 0.650660 | 1_3:+2376865 | None:intergenic |
| CTATGTTGAGTCTAATCTCG+GGG | 0.653466 | 1_3:-2377106 | Msa0096700:CDS |
| AGTGAAGTATTTGATAGTAG+CGG | 0.680092 | 1_3:-2376640 | Msa0096700:CDS |
| AGAGCTTCCATGGAGAACAA+CGG | 0.682274 | 1_3:-2380749 | Msa0096700:CDS |
| GGAAAATCTGATGCATGTGA+AGG | 0.682695 | 1_3:-2380565 | Msa0096700:intron |
| GGGGTTGTAGAGAATATGAG+TGG | 0.686460 | 1_3:-2376793 | Msa0096700:CDS |
| TTTCCAGCAGAATCAGACTG+AGG | 0.699719 | 1_3:+2380583 | None:intergenic |
| CATAGACAGGAGACCAACCA+AGG | 0.702138 | 1_3:+2377124 | None:intergenic |
| GAAGATGTGTAACGAGATGG+CGG | 0.710160 | 1_3:-2376605 | Msa0096700:CDS |
| GAACAACGGAGATATACCCG+AGG | 0.745436 | 1_3:-2380735 | Msa0096700:CDS |
| CAGTATCTTATGTTTCACAG+TGG | 0.751734 | 1_3:+2377311 | None:intergenic |
| TGTTCATCTGAGGTTCCAGG+CGG | 0.754863 | 1_3:+2376949 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATCAATTATTTTAACAAA+CGG | + | chr1_3:2376362-2376381 | None:intergenic | 10.0% |
| !!! | ATATTTTTCTTAACATAAAT+TGG | - | chr1_3:2379649-2379668 | Msa0096700:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378661-2378680 | Msa0096700:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378661-2378680 | Msa0096700:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378661-2378680 | Msa0096700:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378661-2378680 | Msa0096700:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378661-2378680 | Msa0096700:intron | 100.0% |
| !!! | AACCATTTTTATCTATTTAA+AGG | - | chr1_3:2379017-2379036 | Msa0096700:intron | 15.0% |
| !! | ATCCTTTAAATAGATAAAAA+TGG | + | chr1_3:2379022-2379041 | None:intergenic | 15.0% |
| !!! | TTTTTATCTATTTAAAGGAT+TGG | - | chr1_3:2379022-2379041 | Msa0096700:intron | 15.0% |
| !! | TTAGAAATATTTCGATAATT+TGG | - | chr1_3:2379090-2379109 | Msa0096700:intron | 15.0% |
| !!! | ATTTTCATTTTTTTTTGCAT+TGG | - | chr1_3:2379809-2379828 | Msa0096700:intron | 15.0% |
| !!! | ATGTAAAATTAAGTTTTATG+CGG | - | chr1_3:2380852-2380871 | Msa0096700:intron | 15.0% |
| !! | AAAGTAAGAAATATAGAAGA+GGG | + | chr1_3:2376224-2376243 | None:intergenic | 20.0% |
| !! | CTATATTTCTTACTTTCAAT+TGG | - | chr1_3:2376228-2376247 | Msa0096700:three_prime_UTR | 20.0% |
| !! | GAACAAGCTTATATAAATAA+GGG | + | chr1_3:2377012-2377031 | None:intergenic | 20.0% |
| !! | TGAACAAGCTTATATAAATA+AGG | + | chr1_3:2377013-2377032 | None:intergenic | 20.0% |
| !! | ATCATTATCATTGCTTATTT+GGG | - | chr1_3:2377135-2377154 | Msa0096700:CDS | 20.0% |
| !!! | AGTATTTTATTATAGCCAAA+TGG | + | chr1_3:2377870-2377889 | None:intergenic | 20.0% |
| !! | TATAGAAATAGATCAAACAA+TGG | + | chr1_3:2378284-2378303 | None:intergenic | 20.0% |
| !! | ATAGAATATTTAAAGAGCAA+AGG | + | chr1_3:2378428-2378447 | None:intergenic | 20.0% |
| !!! | GCTCTTTAAATATTCTATTT+TGG | - | chr1_3:2378430-2378449 | Msa0096700:intron | 20.0% |
| !!! | CTGAAATTTAATTTAGTTCA+TGG | + | chr1_3:2378578-2378597 | None:intergenic | 20.0% |
| !!! | AGTGAAATGTTTATTTTAGA+AGG | + | chr1_3:2379437-2379456 | None:intergenic | 20.0% |
| !! | ATCATTCTTCAAACTATTAT+TGG | + | chr1_3:2379527-2379546 | None:intergenic | 20.0% |
| !! | CCAAAGAGAATATTTATAAT+CGG | + | chr1_3:2379584-2379603 | None:intergenic | 20.0% |
| !!! | AGTTTTTAAAAGACGTTTAT+TGG | - | chr1_3:2380177-2380196 | Msa0096700:intron | 20.0% |
| !!! | GTTTTTAAAAGACGTTTATT+GGG | - | chr1_3:2380178-2380197 | Msa0096700:intron | 20.0% |
| !!! | TTTTTAAAAGACGTTTATTG+GGG | - | chr1_3:2380179-2380198 | Msa0096700:intron | 20.0% |
| !! | TTTATGAAGATTACAGATAA+TGG | - | chr1_3:2380437-2380456 | Msa0096700:intron | 20.0% |
| !!! | GCATAAAACTTAATTTTACA+TGG | + | chr1_3:2380853-2380872 | None:intergenic | 20.0% |
| !! | TTGAAAGCTATTTATACATA+AGG | - | chr1_3:2381087-2381106 | Msa0096700:CDS | 20.0% |
| ! | GAAAGTAAGAAATATAGAAG+AGG | + | chr1_3:2376225-2376244 | None:intergenic | 25.0% |
| !! | ATGTGGTTTCTAATTTTGAA+TGG | - | chr1_3:2376262-2376281 | Msa0096700:three_prime_UTR | 25.0% |
| !!! | GATTCTAAAATCATACTCTT+TGG | - | chr1_3:2376302-2376321 | Msa0096700:three_prime_UTR | 25.0% |
| ! | AAATATATTCATACGTTCGT+TGG | + | chr1_3:2376473-2376492 | None:intergenic | 25.0% |
| !! | AACATAAAAGCATAAGAGAA+AGG | + | chr1_3:2376704-2376723 | None:intergenic | 25.0% |
| ! | CACTTAATCATTTATCATGT+AGG | - | chr1_3:2376761-2376780 | Msa0096700:CDS | 25.0% |
| ! | AATCCTAGAACTTAAAAGAA+TGG | + | chr1_3:2377040-2377059 | None:intergenic | 25.0% |
| !!! | TTCTTTTAAGTTCTAGGATT+TGG | - | chr1_3:2377040-2377059 | Msa0096700:CDS | 25.0% |
| !!! | TCTTTTAAGTTCTAGGATTT+GGG | - | chr1_3:2377041-2377060 | Msa0096700:CDS | 25.0% |
| ! | CATCATTATCATTGCTTATT+TGG | - | chr1_3:2377134-2377153 | Msa0096700:CDS | 25.0% |
| !! | ATAAAATGTTTCACTAGTCT+TGG | + | chr1_3:2377233-2377252 | None:intergenic | 25.0% |
| !!! | TGCTTAGTTTGTTTATTGTT+TGG | - | chr1_3:2377265-2377284 | Msa0096700:CDS | 25.0% |
| !!! | TTATTGTTTGGTCTTGTTAT+AGG | - | chr1_3:2377277-2377296 | Msa0096700:CDS | 25.0% |
| !!! | TATTGTTTGGTCTTGTTATA+GGG | - | chr1_3:2377278-2377297 | Msa0096700:CDS | 25.0% |
| ! | ATTTGTTCAATTTGTGAAGT+TGG | - | chr1_3:2377349-2377368 | Msa0096700:intron | 25.0% |
| ! | CTAGTCATGAATTATTAAGT+TGG | + | chr1_3:2377424-2377443 | None:intergenic | 25.0% |
| ! | GAAACAAAGTGACATTATAT+AGG | - | chr1_3:2377527-2377546 | Msa0096700:intron | 25.0% |
| ! | GTATATTGTAATAAAGAGTG+TGG | - | chr1_3:2378020-2378039 | Msa0096700:intron | 25.0% |
| ! | AGGATATTAAATAAAGAGTG+TGG | - | chr1_3:2378045-2378064 | Msa0096700:intron | 25.0% |
| !! | TATTAAATAAAGAGTGTGGT+AGG | - | chr1_3:2378049-2378068 | Msa0096700:intron | 25.0% |
| ! | AGAGTGTATTTATTTGATGA+AGG | + | chr1_3:2378256-2378275 | None:intergenic | 25.0% |
| ! | AATCAAAGATGCAATATGAT+AGG | + | chr1_3:2378335-2378354 | None:intergenic | 25.0% |
| ! | GAACATTGAAGAAGAAATTT+AGG | - | chr1_3:2378860-2378879 | Msa0096700:intron | 25.0% |
| ! | ATTGGTGAATGACAATAAAA+AGG | - | chr1_3:2379040-2379059 | Msa0096700:intron | 25.0% |
| ! | AAAATTGAATCCTTCTTGAT+TGG | + | chr1_3:2379138-2379157 | None:intergenic | 25.0% |
| !! | ATATTTATAATCGGTTTCAG+AGG | + | chr1_3:2379575-2379594 | None:intergenic | 25.0% |
| ! | CCGATTATAAATATTCTCTT+TGG | - | chr1_3:2379581-2379600 | Msa0096700:intron | 25.0% |
| ! | AAATATGACATCAAGAAAGT+AGG | + | chr1_3:2379683-2379702 | None:intergenic | 25.0% |
| !!! | TATTTTTTCTGTATGACACT+TGG | - | chr1_3:2379698-2379717 | Msa0096700:intron | 25.0% |
| !!! | ATTTTTTCTGTATGACACTT+GGG | - | chr1_3:2379699-2379718 | Msa0096700:intron | 25.0% |
| !!! | TAGGGCATTTCTTAATTTTA+TGG | - | chr1_3:2379733-2379752 | Msa0096700:intron | 25.0% |
| !! | ATAAACTTGAGATTTGAGAT+GGG | + | chr1_3:2380422-2380441 | None:intergenic | 25.0% |
| ! | AAAGATAATAGATAAGCTGA+TGG | - | chr1_3:2380706-2380725 | Msa0096700:intron | 25.0% |
| !! | AAACGAATTTTCTGTCAATT+AGG | + | chr1_3:2380818-2380837 | None:intergenic | 25.0% |
| ! | ATAATTCTTTCAAACACTTC+TGG | + | chr1_3:2381059-2381078 | None:intergenic | 25.0% |
| ! | CGTAAAATGAGAACTTTTGA+TGG | + | chr1_3:2376099-2376118 | None:intergenic | 30.0% |
| AATTGGTGTGTTTGATTATG+TGG | - | chr1_3:2376245-2376264 | Msa0096700:three_prime_UTR | 30.0% | |
| TACACAAGAATCAAAGTCAA+TGG | + | chr1_3:2376539-2376558 | None:intergenic | 30.0% | |
| ! | TGTGTATTTTGTATTGTTGC+TGG | - | chr1_3:2376553-2376572 | Msa0096700:CDS | 30.0% |
| !! | TTGCACAAATTTGCTGATTT+GGG | + | chr1_3:2376643-2376662 | None:intergenic | 30.0% |
| GTTTATTTCCAATGACCATT+AGG | - | chr1_3:2376721-2376740 | Msa0096700:CDS | 30.0% | |
| TAAGTGCGTTTAATCAAACA+GGG | + | chr1_3:2376747-2376766 | None:intergenic | 30.0% | |
| TTAAGTGCGTTTAATCAAAC+AGG | + | chr1_3:2376748-2376767 | None:intergenic | 30.0% | |
| !! | CTTGTTTTCATAAACTCTAC+GGG | + | chr1_3:2376877-2376896 | None:intergenic | 30.0% |
| !!! | CCTTGTTTTCATAAACTCTA+CGG | + | chr1_3:2376878-2376897 | None:intergenic | 30.0% |
| TGAAACAGTGTATGGATAAT+TGG | - | chr1_3:2376898-2376917 | Msa0096700:CDS | 30.0% | |
| ! | AAATAAGGGTTTGTTTCGAT+TGG | + | chr1_3:2376998-2377017 | None:intergenic | 30.0% |
| !!! | ACACCATTCTTTTAAGTTCT+AGG | - | chr1_3:2377034-2377053 | Msa0096700:CDS | 30.0% |
| ATTGTAGTGTGATTTCTTTC+CGG | - | chr1_3:2377108-2377127 | Msa0096700:CDS | 30.0% | |
| AATCAGCTCTATCATAGTTA+TGG | - | chr1_3:2377182-2377201 | Msa0096700:CDS | 30.0% | |
| TTATAGGGTTGTTAATTCCT+TGG | - | chr1_3:2377293-2377312 | Msa0096700:CDS | 30.0% | |
| TATAGGGTTGTTAATTCCTT+GGG | - | chr1_3:2377294-2377313 | Msa0096700:CDS | 30.0% | |
| GTTCATTTCATAGTTGTCAA+AGG | + | chr1_3:2377379-2377398 | None:intergenic | 30.0% | |
| ! | TATGACACGTTTGCTAAAAT+CGG | + | chr1_3:2377653-2377672 | None:intergenic | 30.0% |
| TGATAAAGACTTAAGCCATT+TGG | - | chr1_3:2377852-2377871 | Msa0096700:intron | 30.0% | |
| ! | TTGTAATAAAGAGTGTGGTT+AGG | - | chr1_3:2378025-2378044 | Msa0096700:intron | 30.0% |
| TTATGCCTCAGTTGTATAAA+TGG | - | chr1_3:2378092-2378111 | Msa0096700:intron | 30.0% | |
| ! | CGATTTCTGCTTCTAAATTT+TGG | - | chr1_3:2378306-2378325 | Msa0096700:intron | 30.0% |
| ! | AAAGTATTAGATGTAGGTTG+TGG | + | chr1_3:2378401-2378420 | None:intergenic | 30.0% |
| GAATATTTAAAGAGCAAAGG+TGG | + | chr1_3:2378425-2378444 | None:intergenic | 30.0% | |
| AATTATTCATTGCACAATCC+AGG | - | chr1_3:2378496-2378515 | Msa0096700:intron | 30.0% | |
| ATTATTCATTGCACAATCCA+GGG | - | chr1_3:2378497-2378516 | Msa0096700:intron | 30.0% | |
| ACAGGCTTATATTTCTCTAA+CGG | + | chr1_3:2378617-2378636 | None:intergenic | 30.0% | |
| ! | TTTGTAATGGAGTAGTGTTA+GGG | - | chr1_3:2378746-2378765 | Msa0096700:intron | 30.0% |
| TGAAGAAGAAATTTAGGAAG+TGG | - | chr1_3:2378866-2378885 | Msa0096700:intron | 30.0% | |
| ! | TTTGATCCCTTTGAAAATGT+CGG | - | chr1_3:2378914-2378933 | Msa0096700:intron | 30.0% |
| GAGAAATGCTAGTTGTAATT+TGG | - | chr1_3:2379066-2379085 | Msa0096700:intron | 30.0% | |
| GTCATATGATATGTTGCATT+GGG | - | chr1_3:2379185-2379204 | Msa0096700:intron | 30.0% | |
| TCATATGATATGTTGCATTG+GGG | - | chr1_3:2379186-2379205 | Msa0096700:intron | 30.0% | |
| GGTTATTCAATTAGATCTGT+GGG | - | chr1_3:2379207-2379226 | Msa0096700:intron | 30.0% | |
| ! | AATTGTATCAGTTTTTCCTG+TGG | - | chr1_3:2379256-2379275 | Msa0096700:intron | 30.0% |
| !! | TGGGAGATTTTAGTCAATTT+TGG | - | chr1_3:2379288-2379307 | Msa0096700:intron | 30.0% |
| !!! | TTTTGGTTTTTATTGCTTCC+TGG | - | chr1_3:2379305-2379324 | Msa0096700:intron | 30.0% |
| GCTTAACTAACTGAAAAACA+CGG | + | chr1_3:2379333-2379352 | None:intergenic | 30.0% | |
| ACAAACAATGCTTCTAAACA+AGG | + | chr1_3:2379355-2379374 | None:intergenic | 30.0% | |
| TGCCATTGTTTCAAAGTTAA+TGG | - | chr1_3:2379616-2379635 | Msa0096700:intron | 30.0% | |
| !! | CACCATTAACTTTGAAACAA+TGG | + | chr1_3:2379621-2379640 | None:intergenic | 30.0% |
| ACCAAAATGCTTAAACATGA+AGG | + | chr1_3:2379786-2379805 | None:intergenic | 30.0% | |
| AATTGAAATGTGTTCATCTG+AGG | + | chr1_3:2380243-2380262 | None:intergenic | 30.0% | |
| ! | GTGAATTTTTGCAAGAAAGT+TGG | - | chr1_3:2380350-2380369 | Msa0096700:intron | 30.0% |
| CATAAACTTGAGATTTGAGA+TGG | + | chr1_3:2380423-2380442 | None:intergenic | 30.0% | |
| ! | AGTGAAGTATTTGATAGTAG+CGG | - | chr1_3:2380539-2380558 | Msa0096700:intron | 30.0% |
| ! | TCTATTATCTTTTGTAACGC+TGG | + | chr1_3:2380698-2380717 | None:intergenic | 30.0% |
| !! | AATTAAGTTTTATGCGGTTG+AGG | - | chr1_3:2380858-2380877 | Msa0096700:intron | 30.0% |
| !! | GTTGCACAAATTTGCTGATT+TGG | + | chr1_3:2376644-2376663 | None:intergenic | 35.0% |
| TTTAATCAAACAGGGCCTAA+TGG | + | chr1_3:2376739-2376758 | None:intergenic | 35.0% | |
| CCGTAGAGTTTATGAAAACA+AGG | - | chr1_3:2376875-2376894 | Msa0096700:CDS | 35.0% | |
| AAACAAGGTGAAACAGTGTA+TGG | - | chr1_3:2376890-2376909 | Msa0096700:CDS | 35.0% | |
| TTGTAGTGTGATTTCTTTCC+GGG | - | chr1_3:2377109-2377128 | Msa0096700:CDS | 35.0% | |
| !! | TGGGTTGATTAGCAAAGAAA+TGG | - | chr1_3:2377154-2377173 | Msa0096700:CDS | 35.0% |
| CTATGAAATGAACCATGTGT+TGG | - | chr1_3:2377386-2377405 | Msa0096700:intron | 35.0% | |
| ATTGAATGATGTCCAACACA+TGG | + | chr1_3:2377401-2377420 | None:intergenic | 35.0% | |
| ! | TTGTTTCCCTTTTGCGTATT+AGG | + | chr1_3:2377514-2377533 | None:intergenic | 35.0% |
| GAGACAACACACAAAAAGAT+AGG | - | chr1_3:2377578-2377597 | Msa0096700:intron | 35.0% | |
| AGGAAATAGAATTCCTCGTT+AGG | - | chr1_3:2377598-2377617 | Msa0096700:intron | 35.0% | |
| AAATAGAATTCCTCGTTAGG+TGG | - | chr1_3:2377601-2377620 | Msa0096700:intron | 35.0% | |
| TCGGTATCTTCAAAAAACAC+AGG | + | chr1_3:2377634-2377653 | None:intergenic | 35.0% | |
| ! | CTTTGAAAAACACCTACTAG+AGG | - | chr1_3:2377733-2377752 | Msa0096700:intron | 35.0% |
| !! | GCATGGAAGCATTCTATTAT+GGG | + | chr1_3:2377761-2377780 | None:intergenic | 35.0% |
| !! | AGCATGGAAGCATTCTATTA+TGG | + | chr1_3:2377762-2377781 | None:intergenic | 35.0% |
| GTCTTTATCAATGAAGCTCT+TGG | + | chr1_3:2377842-2377861 | None:intergenic | 35.0% | |
| GGAAGTGAACAAACAAACTA+TGG | + | chr1_3:2377897-2377916 | None:intergenic | 35.0% | |
| ACTCACCATTTATACAACTG+AGG | + | chr1_3:2378100-2378119 | None:intergenic | 35.0% | |
| AGTTGTATAAATGGTGAGTG+AGG | - | chr1_3:2378101-2378120 | Msa0096700:intron | 35.0% | |
| AGAAGGAGAAAAATCTCTCT+CGG | + | chr1_3:2378181-2378200 | None:intergenic | 35.0% | |
| TGATGAAGGAAAACTGTAGA+AGG | + | chr1_3:2378242-2378261 | None:intergenic | 35.0% | |
| !! | GGTGGAAAAGTATTAGATGT+AGG | + | chr1_3:2378407-2378426 | None:intergenic | 35.0% |
| !!! | ATTTTGGCTCTAATGAACCT+AGG | - | chr1_3:2378446-2378465 | Msa0096700:intron | 35.0% |
| ! | GATAAGGAGGTTGTTTCAAT+GGG | - | chr1_3:2378705-2378724 | Msa0096700:intron | 35.0% |
| ! | GTTTGTAATGGAGTAGTGTT+AGG | - | chr1_3:2378745-2378764 | Msa0096700:intron | 35.0% |
| ! | TTGTAATGGAGTAGTGTTAG+GGG | - | chr1_3:2378747-2378766 | Msa0096700:intron | 35.0% |
| AAGAAATTTAGGAAGTGGAG+TGG | - | chr1_3:2378871-2378890 | Msa0096700:intron | 35.0% | |
| AGAAATTTAGGAAGTGGAGT+GGG | - | chr1_3:2378872-2378891 | Msa0096700:intron | 35.0% | |
| ! | GACATTTTCAAAGGGATCAA+AGG | + | chr1_3:2378915-2378934 | None:intergenic | 35.0% |
| TGTGCTTCAATATTGTGTGT+TGG | - | chr1_3:2378963-2378982 | Msa0096700:intron | 35.0% | |
| GCAATGATTTCCAATCAAGA+AGG | - | chr1_3:2379125-2379144 | Msa0096700:intron | 35.0% | |
| !! | GTTTACCTGCATTATTTTGC+AGG | - | chr1_3:2379163-2379182 | Msa0096700:intron | 35.0% |
| TATGACCTGCAAAATAATGC+AGG | + | chr1_3:2379171-2379190 | None:intergenic | 35.0% | |
| GGTCATATGATATGTTGCAT+TGG | - | chr1_3:2379184-2379203 | Msa0096700:intron | 35.0% | |
| GGGTTATTCAATTAGATCTG+TGG | - | chr1_3:2379206-2379225 | Msa0096700:intron | 35.0% | |
| ! | TTTTCCTGTGGTATTTTGTG+TGG | - | chr1_3:2379268-2379287 | Msa0096700:intron | 35.0% |
| ! | TTTCCTGTGGTATTTTGTGT+GGG | - | chr1_3:2379269-2379288 | Msa0096700:intron | 35.0% |
| ! | GTTTTCTATCATGCTTTCAC+TGG | - | chr1_3:2379457-2379476 | Msa0096700:intron | 35.0% |
| ! | GCCTTCATGTTTAAGCATTT+TGG | - | chr1_3:2379782-2379801 | Msa0096700:intron | 35.0% |
| !!! | TGCATTGGTTTTTGCAGATA+TGG | - | chr1_3:2379824-2379843 | Msa0096700:intron | 35.0% |
| CAGTATCTTATGTTTCACAG+TGG | + | chr1_3:2379871-2379890 | None:intergenic | 35.0% | |
| CACTGTGAAACATAAGATAC+TGG | - | chr1_3:2379869-2379888 | Msa0096700:intron | 35.0% | |
| CTTCTGGACATTGATATTTG+TGG | - | chr1_3:2379978-2379997 | Msa0096700:intron | 35.0% | |
| AGATTAGACTCAACATAGAC+AGG | + | chr1_3:2380071-2380090 | None:intergenic | 35.0% | |
| GTCTATGTTGAGTCTAATCT+CGG | - | chr1_3:2380071-2380090 | Msa0096700:intron | 35.0% | |
| TCTATGTTGAGTCTAATCTC+GGG | - | chr1_3:2380072-2380091 | Msa0096700:intron | 35.0% | |
| !! | TCAATAAGAGAGACTTGTTG+AGG | + | chr1_3:2380317-2380336 | None:intergenic | 35.0% |
| AAAGTTGGAGTGAAAGTTCT+TGG | - | chr1_3:2380365-2380384 | Msa0096700:intron | 35.0% | |
| AAGTTGGAGTGAAAGTTCTT+GGG | - | chr1_3:2380366-2380385 | Msa0096700:intron | 35.0% | |
| TGGTGAGATGAAAGATGTTA+CGG | - | chr1_3:2380457-2380476 | Msa0096700:intron | 35.0% | |
| GCGATTAAATTCAGCATTTC+AGG | + | chr1_3:2380515-2380534 | None:intergenic | 35.0% | |
| ACTATCAAATACTTCACTGC+AGG | + | chr1_3:2380537-2380556 | None:intergenic | 35.0% | |
| AAAGGAACCTTACCAAGAAA+GGG | + | chr1_3:2380602-2380621 | None:intergenic | 35.0% | |
| TAAAGGAACCTTACCAAGAA+AGG | + | chr1_3:2380603-2380622 | None:intergenic | 35.0% | |
| ACAATCTTTATCTGCAAAGC+AGG | + | chr1_3:2380663-2380682 | None:intergenic | 35.0% | |
| ATAAGCTGATGGAAACTAGT+GGG | - | chr1_3:2380717-2380736 | Msa0096700:intron | 35.0% | |
| CTACAATGTCACAAACAAAC+TGG | + | chr1_3:2380970-2380989 | None:intergenic | 35.0% | |
| TATCAGAAACAAACACCTGC+CGG | - | chr1_3:2376119-2376138 | Msa0096700:three_prime_UTR | 40.0% | |
| TATATCTCCGTTGTTCTCCA+TGG | + | chr1_3:2376440-2376459 | None:intergenic | 40.0% | |
| GGAAAATCTGATGCATGTGA+AGG | - | chr1_3:2376614-2376633 | Msa0096700:CDS | 40.0% | |
| ATTTGTGCAACTGCTCCTAA+AGG | - | chr1_3:2376653-2376672 | Msa0096700:CDS | 40.0% | |
| ! | TACGGGATAACTTGCGAAAA+CGG | + | chr1_3:2376860-2376879 | None:intergenic | 40.0% |
| ! | GTGACTTGTGAGACTGATTA+TGG | + | chr1_3:2376942-2376961 | None:intergenic | 40.0% |
| TATCTAGTACATGAGCACGA+AGG | + | chr1_3:2377089-2377108 | None:intergenic | 40.0% | |
| ! | AGCAATGATAATGATGAGCC+CGG | + | chr1_3:2377130-2377149 | None:intergenic | 40.0% |
| ATTCCTTGGGCATTTGATAG+TGG | - | chr1_3:2377307-2377326 | Msa0096700:CDS | 40.0% | |
| ! | TTCCTTGGGCATTTGATAGT+GGG | - | chr1_3:2377308-2377327 | Msa0096700:CDS | 40.0% |
| ! | GTGGGTATAATTTTGTGCAG+AGG | - | chr1_3:2377326-2377345 | Msa0096700:CDS | 40.0% |
| CATTAGGCAAGTGTGGAAAT+CGG | + | chr1_3:2377478-2377497 | None:intergenic | 40.0% | |
| TTGCCTAATGGTGAAGTTAG+CGG | - | chr1_3:2377488-2377507 | Msa0096700:intron | 40.0% | |
| CATGAACAACACACTAGCTA+TGG | + | chr1_3:2377698-2377717 | None:intergenic | 40.0% | |
| ! | TAGCTAGTGTGTTGTTCATG+TGG | - | chr1_3:2377698-2377717 | Msa0096700:intron | 40.0% |
| ! | AGCTAGTGTGTTGTTCATGT+GGG | - | chr1_3:2377699-2377718 | Msa0096700:intron | 40.0% |
| AATAGAATGCTTCCATGCTC+AGG | - | chr1_3:2377763-2377782 | Msa0096700:intron | 40.0% | |
| TTCCATGCTCAGGAAAAAGA+TGG | - | chr1_3:2377773-2377792 | Msa0096700:intron | 40.0% | |
| ! | AACCATCTTTTTCCTGAGCA+TGG | + | chr1_3:2377778-2377797 | None:intergenic | 40.0% |
| AATGAAGCTCTTGGATACAG+AGG | + | chr1_3:2377833-2377852 | None:intergenic | 40.0% | |
| CGAGGGCTGATAAGTAAAAA+GGG | - | chr1_3:2377997-2378016 | Msa0096700:intron | 40.0% | |
| GAGGGCTGATAAGTAAAAAG+GGG | - | chr1_3:2377998-2378017 | Msa0096700:intron | 40.0% | |
| TGAGGCTAGTGAAGATTGAT+GGG | - | chr1_3:2378119-2378138 | Msa0096700:intron | 40.0% | |
| TAAGATGCTGAATCACACCT+AGG | + | chr1_3:2378466-2378485 | None:intergenic | 40.0% | |
| ATTGCACAATCCAGGGAATT+GGG | - | chr1_3:2378504-2378523 | Msa0096700:intron | 40.0% | |
| ATATAAGCCTGTCGCTGAAA+TGG | - | chr1_3:2378625-2378644 | Msa0096700:intron | 40.0% | |
| ! | GGATAAGGAGGTTGTTTCAA+TGG | - | chr1_3:2378704-2378723 | Msa0096700:intron | 40.0% |
| ! | GAGGTTGTTTCAATGGGAAA+AGG | - | chr1_3:2378711-2378730 | Msa0096700:intron | 40.0% |
| GTTTCAATGGGAAAAGGAGT+TGG | - | chr1_3:2378717-2378736 | Msa0096700:intron | 40.0% | |
| AGAGTTAGATAGGTGGAAGT+GGG | - | chr1_3:2378786-2378805 | Msa0096700:intron | 40.0% | |
| ! | ATCCCTTTGAAAATGTCGGT+TGG | - | chr1_3:2378918-2378937 | Msa0096700:intron | 40.0% |
| ! | CTCCAACCGACATTTTCAAA+GGG | + | chr1_3:2378923-2378942 | None:intergenic | 40.0% |
| GCTTCAATATTGTGTGTTGG+AGG | - | chr1_3:2378966-2378985 | Msa0096700:intron | 40.0% | |
| !! | ATTAGATCTGTGGGTTAGCT+AGG | - | chr1_3:2379216-2379235 | Msa0096700:intron | 40.0% |
| !! | TATGACACTTGGGCTGTTTT+TGG | - | chr1_3:2379709-2379728 | Msa0096700:intron | 40.0% |
| !!! | ACTTGGGCTGTTTTTGGATA+GGG | - | chr1_3:2379715-2379734 | Msa0096700:intron | 40.0% |
| TTTCACAGTGGCCATTCTTT+CGG | + | chr1_3:2379859-2379878 | None:intergenic | 40.0% | |
| !! | CATAAGATACTGGTCTTGTC+AGG | - | chr1_3:2379879-2379898 | Msa0096700:intron | 40.0% |
| !! | ATACTGGTCTTGTCAGGAAA+GGG | - | chr1_3:2379885-2379904 | Msa0096700:intron | 40.0% |
| !!! | GGATTTTCAAGTTGGTCTTC+TGG | - | chr1_3:2379962-2379981 | Msa0096700:intron | 40.0% |
| CTATGTTGAGTCTAATCTCG+GGG | - | chr1_3:2380073-2380092 | Msa0096700:intron | 40.0% | |
| ATCCAGACGAAGCTGTTATA+TGG | - | chr1_3:2380123-2380142 | Msa0096700:intron | 40.0% | |
| !! | TTGATAAGCCCATTTTTGCG+TGG | + | chr1_3:2380155-2380174 | None:intergenic | 40.0% |
| CTAGATGCTGCTAATGTAGA+CGG | - | chr1_3:2380272-2380291 | Msa0096700:intron | 40.0% | |
| AGTTGGAGTGAAAGTTCTTG+GGG | - | chr1_3:2380367-2380386 | Msa0096700:intron | 40.0% | |
| AGATGAAAGATGTTACGGAG+TGG | - | chr1_3:2380462-2380481 | Msa0096700:intron | 40.0% | |
| AGATGTTACGGAGTGGATAT+CGG | - | chr1_3:2380469-2380488 | Msa0096700:intron | 40.0% | |
| ! | GAAGTATTTGATAGTAGCGG+TGG | - | chr1_3:2380542-2380561 | Msa0096700:intron | 40.0% |
| TTGCAAAGCTGTGGATCTAA+AGG | + | chr1_3:2380620-2380639 | None:intergenic | 40.0% | |
| TTTAGATCCACAGCTTTGCA+AGG | - | chr1_3:2380619-2380638 | Msa0096700:intron | 40.0% | |
| GATAAGCTGATGGAAACTAG+TGG | - | chr1_3:2380716-2380735 | Msa0096700:intron | 40.0% | |
| GAAGGGAAAAGGGAAAAACC+TGG | + | chr1_3:2376163-2376182 | None:intergenic | 45.0% | |
| AGAGAAGAGAAGAGCTTCCA+TGG | - | chr1_3:2376420-2376439 | Msa0096700:exon | 45.0% | |
| AGAGCTTCCATGGAGAACAA+CGG | - | chr1_3:2376430-2376449 | Msa0096700:exon | 45.0% | |
| TTTCCAGCAGAATCAGACTG+AGG | + | chr1_3:2376599-2376618 | None:intergenic | 45.0% | |
| !! | AAGGTGAAGAGTACCAACCA+GGG | + | chr1_3:2376685-2376704 | None:intergenic | 45.0% |
| !! | AAAGGTGAAGAGTACCAACC+AGG | + | chr1_3:2376686-2376705 | None:intergenic | 45.0% |
| AAACAGGGCCTAATGGTCAT+TGG | + | chr1_3:2376732-2376751 | None:intergenic | 45.0% | |
| TACCCACTATCAAATGCCCA+AGG | + | chr1_3:2377313-2377332 | None:intergenic | 45.0% | |
| CGATTTCCACACTTGCCTAA+TGG | - | chr1_3:2377476-2377495 | Msa0096700:intron | 45.0% | |
| ACTTCACCATTAGGCAAGTG+TGG | + | chr1_3:2377485-2377504 | None:intergenic | 45.0% | |
| TTAGCGGCCTAATACGCAAA+AGG | - | chr1_3:2377504-2377523 | Msa0096700:intron | 45.0% | |
| TAGCGGCCTAATACGCAAAA+GGG | - | chr1_3:2377505-2377524 | Msa0096700:intron | 45.0% | |
| ! | TAGTGTGTTGTTCATGTGGG+AGG | - | chr1_3:2377702-2377721 | Msa0096700:intron | 45.0% |
| ! | AGTGTGTTGTTCATGTGGGA+GGG | - | chr1_3:2377703-2377722 | Msa0096700:intron | 45.0% |
| CTATTATGGGAGCCTCTAGT+AGG | + | chr1_3:2377748-2377767 | None:intergenic | 45.0% | |
| CAACAAAAGCTCTTCGATGC+AGG | + | chr1_3:2377808-2377827 | None:intergenic | 45.0% | |
| ACTTCCCTGTGTTCCTCATT+GGG | - | chr1_3:2377911-2377930 | Msa0096700:intron | 45.0% | |
| GCTCTCGAAACAGAGTTTGA+TGG | - | chr1_3:2377965-2377984 | Msa0096700:intron | 45.0% | |
| TTTGATGGAGATCAGAGCGA+GGG | - | chr1_3:2377980-2377999 | Msa0096700:intron | 45.0% | |
| GCGAGGGCTGATAAGTAAAA+AGG | - | chr1_3:2377996-2378015 | Msa0096700:intron | 45.0% | |
| GTGAGGCTAGTGAAGATTGA+TGG | - | chr1_3:2378118-2378137 | Msa0096700:intron | 45.0% | |
| GAGGCTAGTGAAGATTGATG+GGG | - | chr1_3:2378120-2378139 | Msa0096700:intron | 45.0% | |
| TGATGGGGACTGAGGAATAT+TGG | - | chr1_3:2378135-2378154 | Msa0096700:intron | 45.0% | |
| TGGAGTGAACCATCACAGTT+AGG | - | chr1_3:2378155-2378174 | Msa0096700:intron | 45.0% | |
| ! | GAGATTTTTCTCCTTCTCCG+AGG | - | chr1_3:2378184-2378203 | Msa0096700:intron | 45.0% |
| CATTGCACAATCCAGGGAAT+TGG | - | chr1_3:2378503-2378522 | Msa0096700:intron | 45.0% | |
| ACTACAACCATTTCAGCGAC+AGG | + | chr1_3:2378635-2378654 | None:intergenic | 45.0% | |
| TGTCGCTGAAATGGTTGTAG+TGG | - | chr1_3:2378634-2378653 | Msa0096700:intron | 45.0% | |
| GTCGCTGAAATGGTTGTAGT+GGG | - | chr1_3:2378635-2378654 | Msa0096700:intron | 45.0% | |
| TCGCTGAAATGGTTGTAGTG+GGG | - | chr1_3:2378636-2378655 | Msa0096700:intron | 45.0% | |
| TCAATGGGAAAAGGAGTTGG+TGG | - | chr1_3:2378720-2378739 | Msa0096700:intron | 45.0% | |
| !! | GAGTTGGTGGTGGTTTGTAA+TGG | - | chr1_3:2378733-2378752 | Msa0096700:intron | 45.0% |
| !! | AGTGTTAGGGGTTGATTCGA+TGG | - | chr1_3:2378759-2378778 | Msa0096700:intron | 45.0% |
| CGATGGAGAGAGAGTTAGAT+AGG | - | chr1_3:2378776-2378795 | Msa0096700:intron | 45.0% | |
| TGGAGAGAGAGTTAGATAGG+TGG | - | chr1_3:2378779-2378798 | Msa0096700:intron | 45.0% | |
| GAGAGTTAGATAGGTGGAAG+TGG | - | chr1_3:2378785-2378804 | Msa0096700:intron | 45.0% | |
| TTAGATAGGTGGAAGTGGGA+AGG | - | chr1_3:2378790-2378809 | Msa0096700:intron | 45.0% | |
| ! | CCTCCAACCGACATTTTCAA+AGG | + | chr1_3:2378924-2378943 | None:intergenic | 45.0% |
| ! | CCTTTGAAAATGTCGGTTGG+AGG | - | chr1_3:2378921-2378940 | Msa0096700:intron | 45.0% |
| ATATTGTGTGTTGGAGGCTG+TGG | - | chr1_3:2378972-2378991 | Msa0096700:intron | 45.0% | |
| TGTGGTAAACTCGAAGAAGG+AGG | - | chr1_3:2378990-2379009 | Msa0096700:intron | 45.0% | |
| ! | GGTTAGCTAGGAAGTTGTGT+TGG | - | chr1_3:2379228-2379247 | Msa0096700:intron | 45.0% |
| TCTCCCACACAAAATACCAC+AGG | + | chr1_3:2379275-2379294 | None:intergenic | 45.0% | |
| ATGCTTTCACTGGACATTGC+AGG | - | chr1_3:2379467-2379486 | Msa0096700:intron | 45.0% | |
| !!! | CACTTGGGCTGTTTTTGGAT+AGG | - | chr1_3:2379714-2379733 | Msa0096700:intron | 45.0% |
| !! | GATACTGGTCTTGTCAGGAA+AGG | - | chr1_3:2379884-2379903 | Msa0096700:intron | 45.0% |
| !!! | GCTGCAAGGGATTTTCAAGT+TGG | - | chr1_3:2379954-2379973 | Msa0096700:intron | 45.0% |
| CTTCTAGGCCAAGCATCTTT+GGG | + | chr1_3:2380013-2380032 | None:intergenic | 45.0% | |
| GGTGTATCTCTTGACCTTCT+AGG | + | chr1_3:2380028-2380047 | None:intergenic | 45.0% | |
| AATCTCGGGGTCATGTCAAT+TGG | - | chr1_3:2380086-2380105 | Msa0096700:intron | 45.0% | |
| ATCTCGGGGTCATGTCAATT+GGG | - | chr1_3:2380087-2380106 | Msa0096700:intron | 45.0% | |
| ATAACAGCTTCGTCTGGATG+AGG | + | chr1_3:2380122-2380141 | None:intergenic | 45.0% | |
| CTCCATATAACAGCTTCGTC+TGG | + | chr1_3:2380128-2380147 | None:intergenic | 45.0% | |
| GACGAAGCTGTTATATGGAG+AGG | - | chr1_3:2380128-2380147 | Msa0096700:intron | 45.0% | |
| ! | ATGTGTTCATCTGAGGTTCC+AGG | + | chr1_3:2380236-2380255 | None:intergenic | 45.0% |
| CGTCTACATTAGCAGCATCT+AGG | + | chr1_3:2380274-2380293 | None:intergenic | 45.0% | |
| !! | AAGAGAGACTTGTTGAGGAG+TGG | + | chr1_3:2380312-2380331 | None:intergenic | 45.0% |
| GGGGTTGTAGAGAATATGAG+TGG | - | chr1_3:2380386-2380405 | Msa0096700:intron | 45.0% | |
| ! | CTTGAGATTTGAGATGGGCT+GGG | + | chr1_3:2380417-2380436 | None:intergenic | 45.0% |
| ! | ACTTGAGATTTGAGATGGGC+TGG | + | chr1_3:2380418-2380437 | None:intergenic | 45.0% |
| ! | GTATTTGATAGTAGCGGTGG+TGG | - | chr1_3:2380545-2380564 | Msa0096700:intron | 45.0% |
| AAAGCAGGATCTGCCTTCTT+CGG | + | chr1_3:2380648-2380667 | None:intergenic | 45.0% | |
| !! | AACTAGTGGGCTGTCAATGA+CGG | - | chr1_3:2380730-2380749 | Msa0096700:CDS | 45.0% |
| ! | CTGTCAATGACGGAAAGCAA+TGG | - | chr1_3:2380740-2380759 | Msa0096700:CDS | 45.0% |
| !! | AAAGAAAAAAATAATAAAAA+AGG | + | chr1_3:2376388-2376407 | None:intergenic | 5.0% |
| GGAAAAGGGAAAAACCTGGC+GGG | + | chr1_3:2376159-2376178 | None:intergenic | 50.0% | |
| GGGAAAAGGGAAAAACCTGG+CGG | + | chr1_3:2376160-2376179 | None:intergenic | 50.0% | |
| GAACAACGGAGATATACCCG+AGG | - | chr1_3:2376444-2376463 | Msa0096700:CDS | 50.0% | |
| ATACGTTCGTTGGCATCCTC+GGG | + | chr1_3:2376463-2376482 | None:intergenic | 50.0% | |
| CATACGTTCGTTGGCATCCT+CGG | + | chr1_3:2376464-2376483 | None:intergenic | 50.0% | |
| CTGGCATTTACAGATTGCCC+AGG | - | chr1_3:2376572-2376591 | Msa0096700:CDS | 50.0% | |
| CAGAATCAGACTGAGGACCT+GGG | + | chr1_3:2376592-2376611 | None:intergenic | 50.0% | |
| AGGCCGCTAACTTCACCATT+AGG | + | chr1_3:2377494-2377513 | None:intergenic | 50.0% | |
| AGGATGTCTACCACCTAACG+AGG | + | chr1_3:2377614-2377633 | None:intergenic | 50.0% | |
| TTGTTCATGTGGGAGGGTGA+TGG | - | chr1_3:2377709-2377728 | Msa0096700:intron | 50.0% | |
| CACTTCCCTGTGTTCCTCAT+TGG | - | chr1_3:2377910-2377929 | Msa0096700:intron | 50.0% | |
| CCTTCCCAATGAGGAACACA+GGG | + | chr1_3:2377918-2377937 | None:intergenic | 50.0% | |
| CCTGTGTTCCTCATTGGGAA+GGG | - | chr1_3:2377916-2377935 | Msa0096700:intron | 50.0% | |
| GTCAACATCCCTTCCCAATG+AGG | + | chr1_3:2377927-2377946 | None:intergenic | 50.0% | |
| TGACCTTGAGCATCTGCTAC+AGG | - | chr1_3:2377943-2377962 | Msa0096700:intron | 50.0% | |
| GTTTGATGGAGATCAGAGCG+AGG | - | chr1_3:2377979-2377998 | Msa0096700:intron | 50.0% | |
| AGTGTGGTAGGCTGCTTAGT+TGG | - | chr1_3:2378061-2378080 | Msa0096700:intron | 50.0% | |
| GTGAAGATTGATGGGGACTG+AGG | - | chr1_3:2378127-2378146 | Msa0096700:intron | 50.0% | |
| !! | AGCTTGGCTCTGGTGTAGAT+TGG | - | chr1_3:2378207-2378226 | Msa0096700:intron | 50.0% |
| !! | GCTTGGCTCTGGTGTAGATT+GGG | - | chr1_3:2378208-2378227 | Msa0096700:intron | 50.0% |
| CTGTGTATCTCCCAATTCCC+TGG | + | chr1_3:2378517-2378536 | None:intergenic | 50.0% | |
| CGCTGAAATGGTTGTAGTGG+GGG | - | chr1_3:2378637-2378656 | Msa0096700:intron | 50.0% | |
| ! | TGAAATGGTTGTAGTGGGGG+TGG | - | chr1_3:2378640-2378659 | Msa0096700:intron | 50.0% |
| ! | GAAATGGTTGTAGTGGGGGT+GGG | - | chr1_3:2378641-2378660 | Msa0096700:intron | 50.0% |
| ! | AAATGGTTGTAGTGGGGGTG+GGG | - | chr1_3:2378642-2378661 | Msa0096700:intron | 50.0% |
| !! | ATGGGAAAAGGAGTTGGTGG+TGG | - | chr1_3:2378723-2378742 | Msa0096700:intron | 50.0% |
| ATAGGTGGAAGTGGGAAGGA+GGG | - | chr1_3:2378794-2378813 | Msa0096700:intron | 50.0% | |
| !! | TGGAGTGGGCTAAAGAGGTT+TGG | - | chr1_3:2378886-2378905 | Msa0096700:intron | 50.0% |
| ! | ATGTCGGTTGGAGGCAAAAG+AGG | - | chr1_3:2378930-2378949 | Msa0096700:intron | 50.0% |
| ! | TGTCGGTTGGAGGCAAAAGA+GGG | - | chr1_3:2378931-2378950 | Msa0096700:intron | 50.0% |
| GGCTGTGGTAAACTCGAAGA+AGG | - | chr1_3:2378987-2379006 | Msa0096700:intron | 50.0% | |
| TAACTGAAAAACACGGCGCC+AGG | + | chr1_3:2379326-2379345 | None:intergenic | 50.0% | |
| GGTTGCCATTGCCGAAAGAA+TGG | - | chr1_3:2379845-2379864 | Msa0096700:intron | 50.0% | |
| AGTGGCCATTCTTTCGGCAA+TGG | + | chr1_3:2379853-2379872 | None:intergenic | 50.0% | |
| ! | TTGTCAGGAAAGGGAGGTGT+TGG | - | chr1_3:2379894-2379913 | Msa0096700:intron | 50.0% |
| AGCTAACGCAAATGCCAGCT+GGG | + | chr1_3:2379937-2379956 | None:intergenic | 50.0% | |
| TGGCATTTGCGTTAGCTGCA+AGG | - | chr1_3:2379940-2379959 | Msa0096700:intron | 50.0% | |
| GGCATTTGCGTTAGCTGCAA+GGG | - | chr1_3:2379941-2379960 | Msa0096700:intron | 50.0% | |
| !! | CCAAGCATCTTTGGGATGCT+TGG | + | chr1_3:2380005-2380024 | None:intergenic | 50.0% |
| CCAAGCATCCCAAAGATGCT+TGG | - | chr1_3:2380002-2380021 | Msa0096700:intron | 50.0% | |
| CCTTCTAGGCCAAGCATCTT+TGG | + | chr1_3:2380014-2380033 | None:intergenic | 50.0% | |
| CCAAAGATGCTTGGCCTAGA+AGG | - | chr1_3:2380011-2380030 | Msa0096700:intron | 50.0% | |
| GAGATACACCAGAGCAACCT+TGG | - | chr1_3:2380038-2380057 | Msa0096700:intron | 50.0% | |
| TACACCAGAGCAACCTTGGT+TGG | - | chr1_3:2380042-2380061 | Msa0096700:intron | 50.0% | |
| CATAGACAGGAGACCAACCA+AGG | + | chr1_3:2380058-2380077 | None:intergenic | 50.0% | |
| TGGAGAGGTCCACGCAAAAA+TGG | - | chr1_3:2380143-2380162 | Msa0096700:intron | 50.0% | |
| GGAGAGGTCCACGCAAAAAT+GGG | - | chr1_3:2380144-2380163 | Msa0096700:intron | 50.0% | |
| CTAATTGTTGATGCTCCGCC+TGG | - | chr1_3:2380215-2380234 | Msa0096700:intron | 50.0% | |
| ! | TGTTCATCTGAGGTTCCAGG+CGG | + | chr1_3:2380233-2380252 | None:intergenic | 50.0% |
| CAAGGGAGGGGAAGGGAAAA+GGG | + | chr1_3:2376173-2376192 | None:intergenic | 55.0% | |
| ACAAGGGAGGGGAAGGGAAA+AGG | + | chr1_3:2376174-2376193 | None:intergenic | 55.0% | |
| TCCCTTCCCCTCCCTTGTTA+CGG | - | chr1_3:2376176-2376195 | Msa0096700:three_prime_UTR | 55.0% | |
| GCAGAATCAGACTGAGGACC+TGG | + | chr1_3:2376593-2376612 | None:intergenic | 55.0% | |
| GGTCCTCAGTCTGATTCTGC+TGG | - | chr1_3:2376593-2376612 | Msa0096700:CDS | 55.0% | |
| CAACCAGGGTCAGGTCCTTT+AGG | + | chr1_3:2376671-2376690 | None:intergenic | 55.0% | |
| CTAAAGGACCTGACCCTGGT+TGG | - | chr1_3:2376669-2376688 | Msa0096700:CDS | 55.0% | |
| !! | GAAGAGTACCAACCAGGGTC+AGG | + | chr1_3:2376680-2376699 | None:intergenic | 55.0% |
| CCCTGTGTTCCTCATTGGGA+AGG | - | chr1_3:2377915-2377934 | Msa0096700:intron | 55.0% | |
| CCCTTCCCAATGAGGAACAC+AGG | + | chr1_3:2377919-2377938 | None:intergenic | 55.0% | |
| GAGCCTGTAGCAGATGCTCA+AGG | + | chr1_3:2377949-2377968 | None:intergenic | 55.0% | |
| TGGTAGGCTGCTTAGTTGGC+AGG | - | chr1_3:2378065-2378084 | Msa0096700:intron | 55.0% | |
| CTCTCTCGGCCTAACTGTGA+TGG | + | chr1_3:2378167-2378186 | None:intergenic | 55.0% | |
| TTCTCCTTCTCCGAGGAGCT+TGG | - | chr1_3:2378191-2378210 | Msa0096700:intron | 55.0% | |
| TACACCAGAGCCAAGCTCCT+CGG | + | chr1_3:2378204-2378223 | None:intergenic | 55.0% | |
| ! | AATGGTTGTAGTGGGGGTGG+GGG | - | chr1_3:2378643-2378662 | Msa0096700:intron | 55.0% |
| TGGCGAGGGGGAATTGGATA+AGG | - | chr1_3:2378689-2378708 | Msa0096700:intron | 55.0% | |
| CGAGGGGGAATTGGATAAGG+AGG | - | chr1_3:2378692-2378711 | Msa0096700:intron | 55.0% | |
| GATAGGTGGAAGTGGGAAGG+AGG | - | chr1_3:2378793-2378812 | Msa0096700:intron | 55.0% | |
| !! | GGAAGTGGAGTGGGCTAAAG+AGG | - | chr1_3:2378881-2378900 | Msa0096700:intron | 55.0% |
| GTCGGTTGGAGGCAAAAGAG+GGG | - | chr1_3:2378932-2378951 | Msa0096700:intron | 55.0% | |
| !! | CTGGTCTTGTCAGGAAAGGG+AGG | - | chr1_3:2379888-2379907 | Msa0096700:intron | 55.0% |
| ! | GAGCACATTTTCTGCCCAGC+TGG | - | chr1_3:2379920-2379939 | Msa0096700:intron | 55.0% |
| CAGCTAACGCAAATGCCAGC+TGG | + | chr1_3:2379938-2379957 | None:intergenic | 55.0% | |
| GAGACCAACCAAGGTTGCTC+TGG | + | chr1_3:2380049-2380068 | None:intergenic | 55.0% | |
| !! | GATTTGAGATGGGCTGGGAC+AGG | + | chr1_3:2380412-2380431 | None:intergenic | 55.0% |
| ! | GAGATGGCGGTACCCTTTCT+TGG | - | chr1_3:2380587-2380606 | Msa0096700:CDS | 55.0% |
| GGCGGTACCCTTTCTTGGTA+AGG | - | chr1_3:2380592-2380611 | Msa0096700:CDS | 55.0% | |
| CTTTGCAAGGCAGCCGAAGA+AGG | - | chr1_3:2380632-2380651 | Msa0096700:intron | 55.0% | |
| GCCGTAACAAGGGAGGGGAA+GGG | + | chr1_3:2376180-2376199 | None:intergenic | 60.0% | |
| CTTCCCCTCCCTTGTTACGG+CGG | - | chr1_3:2376179-2376198 | Msa0096700:three_prime_UTR | 60.0% | |
| AATCGCGGCCGCCGTAACAA+GGG | + | chr1_3:2376190-2376209 | None:intergenic | 60.0% | |
| AAATCGCGGCCGCCGTAACA+AGG | + | chr1_3:2376191-2376210 | None:intergenic | 60.0% | |
| GCTCCTAAAGGACCTGACCC+TGG | - | chr1_3:2376665-2376684 | Msa0096700:CDS | 60.0% | |
| AGAGCCAAGCTCCTCGGAGA+AGG | + | chr1_3:2378198-2378217 | None:intergenic | 60.0% | |
| TTCTCCGAGGAGCTTGGCTC+TGG | - | chr1_3:2378197-2378216 | Msa0096700:intron | 60.0% | |
| ! | ATGGTTGTAGTGGGGGTGGG+GGG | - | chr1_3:2378644-2378663 | Msa0096700:intron | 60.0% |
| TCGGCTGCCTTGCAAAGCTG+TGG | + | chr1_3:2380629-2380648 | None:intergenic | 60.0% | |
| GTGACGACGATGACTCCGGC+AGG | + | chr1_3:2376137-2376156 | None:intergenic | 65.0% | |
| GCGGGTGACGACGATGACTC+CGG | + | chr1_3:2376141-2376160 | None:intergenic | 65.0% | |
| AGTCATCGTCGTCACCCGCC+AGG | - | chr1_3:2376142-2376161 | Msa0096700:three_prime_UTR | 65.0% | |
| CGCCGTAACAAGGGAGGGGA+AGG | + | chr1_3:2376181-2376200 | None:intergenic | 65.0% | |
| GTTACGGCGGCCGCGATTTG+CGG | - | chr1_3:2376192-2376211 | Msa0096700:three_prime_UTR | 65.0% | |
| ! | TGGTTGTAGTGGGGGTGGGG+GGG | - | chr1_3:2378645-2378664 | Msa0096700:intron | 65.0% |
| CGGCCGCCGTAACAAGGGAG+GGG | + | chr1_3:2376185-2376204 | None:intergenic | 70.0% | |
| GCGGCCGCCGTAACAAGGGA+GGG | + | chr1_3:2376186-2376205 | None:intergenic | 70.0% | |
| AGGGCCGCCACCGCAAATCG+CGG | + | chr1_3:2376205-2376224 | None:intergenic | 70.0% | |
| ! | GGTTGTAGTGGGGGTGGGGG+GGG | - | chr1_3:2378646-2378665 | Msa0096700:intron | 70.0% |
| ! | GTTGTAGTGGGGGTGGGGGG+GGG | - | chr1_3:2378647-2378666 | Msa0096700:intron | 70.0% |
| ! | TTGTAGTGGGGGTGGGGGGG+GGG | - | chr1_3:2378648-2378667 | Msa0096700:intron | 70.0% |
| GGGGGATGGCGAGGGGGAAT+TGG | - | chr1_3:2378683-2378702 | Msa0096700:intron | 70.0% | |
| CGCGGCCGCCGTAACAAGGG+AGG | + | chr1_3:2376187-2376206 | None:intergenic | 75.0% | |
| ACGGCGGCCGCGATTTGCGG+TGG | - | chr1_3:2376195-2376214 | Msa0096700:three_prime_UTR | 75.0% | |
| GCGGCCGCGATTTGCGGTGG+CGG | - | chr1_3:2376198-2376217 | Msa0096700:three_prime_UTR | 75.0% | |
| ! | TGTAGTGGGGGTGGGGGGGG+GGG | - | chr1_3:2378649-2378668 | Msa0096700:intron | 75.0% |
| !! | GTAGTGGGGGTGGGGGGGGG+GGG | - | chr1_3:2378650-2378669 | Msa0096700:intron | 80.0% |
| ! | TAGTGGGGGTGGGGGGGGGG+GGG | - | chr1_3:2378651-2378670 | Msa0096700:intron | 80.0% |
| ! | AGTGGGGGTGGGGGGGGGGG+GGG | - | chr1_3:2378652-2378671 | Msa0096700:intron | 85.0% |
| ! | GGGGGGGGGGGGGATGGCGA+GGG | - | chr1_3:2378675-2378694 | Msa0096700:intron | 85.0% |
| ! | GGGGGGGGGGGGATGGCGAG+GGG | - | chr1_3:2378676-2378695 | Msa0096700:intron | 85.0% |
| ! | GGGGGGGGGGGATGGCGAGG+GGG | - | chr1_3:2378677-2378696 | Msa0096700:intron | 85.0% |
| ! | GTGGGGGTGGGGGGGGGGGG+GGG | - | chr1_3:2378653-2378672 | Msa0096700:intron | 90.0% |
| ! | TGGGGGTGGGGGGGGGGGGG+GGG | - | chr1_3:2378654-2378673 | Msa0096700:intron | 90.0% |
| ! | GGGGGGGGGGGGGGATGGCG+AGG | - | chr1_3:2378674-2378693 | Msa0096700:intron | 90.0% |
| ! | GGGGGTGGGGGGGGGGGGGG+GGG | - | chr1_3:2378655-2378674 | Msa0096700:intron | 95.0% |
| ! | GGGGTGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378656-2378675 | Msa0096700:intron | 95.0% |
| ! | GGGTGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378657-2378676 | Msa0096700:intron | 95.0% |
| ! | GGTGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378658-2378677 | Msa0096700:intron | 95.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378659-2378678 | Msa0096700:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:2378660-2378679 | Msa0096700:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGGA+TGG | - | chr1_3:2378669-2378688 | Msa0096700:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 2376078 | 2381123 | 2376078 | ID=Msa0096700;Name=Msa0096700 |
| chr1_3 | mRNA | 2376078 | 2381123 | 2376078 | ID=Msa0096700-mRNA-1;Parent=Msa0096700;Name=Msa0096700-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.66|0.75|1|0.66|0.75|4|354|376 |
| chr1_3 | exon | 2376078 | 2377360 | 2376078 | ID=Msa0096700-mRNA-1:exon:600;Parent=Msa0096700-mRNA-1 |
| chr1_3 | exon | 2380566 | 2380616 | 2380566 | ID=Msa0096700-mRNA-1:exon:599;Parent=Msa0096700-mRNA-1 |
| chr1_3 | exon | 2380723 | 2380787 | 2380723 | ID=Msa0096700-mRNA-1:exon:598;Parent=Msa0096700-mRNA-1 |
| chr1_3 | exon | 2381038 | 2381123 | 2381038 | ID=Msa0096700-mRNA-1:exon:597;Parent=Msa0096700-mRNA-1 |
| chr1_3 | CDS | 2381038 | 2381123 | 2381038 | ID=Msa0096700-mRNA-1:cds;Parent=Msa0096700-mRNA-1 |
| chr1_3 | CDS | 2380723 | 2380787 | 2380723 | ID=Msa0096700-mRNA-1:cds;Parent=Msa0096700-mRNA-1 |
| chr1_3 | CDS | 2380566 | 2380616 | 2380566 | ID=Msa0096700-mRNA-1:cds;Parent=Msa0096700-mRNA-1 |
| chr1_3 | CDS | 2376432 | 2377360 | 2376432 | ID=Msa0096700-mRNA-1:cds;Parent=Msa0096700-mRNA-1 |
| chr1_3 | three_prime_UTR | 2376078 | 2376431 | 2376078 | ID=Msa0096700-mRNA-1:three_prime_utr;Parent=Msa0096700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
