Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0098990 | XP_003588988.1 | 95.184 | 353 | 0 | 1 | 41 | 376 | 3 | 355 | 0.0 | 677 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0098990 | sp|Q8H1Q2|NBP35_ARATH | 74.000 | 350 | 71 | 3 | 41 | 372 | 3 | 350 | 0.0 | 528 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0098990 | A0A396JFU3 | 94.915 | 354 | 0 | 1 | 41 | 376 | 3 | 356 | 0.0 | 677 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003630 | Msa0098990 | 0.800228 | 1.590002e-48 | -8.615850e-47 |
Msa0005270 | Msa0098990 | 0.803759 | 2.989815e-49 | -8.615850e-47 |
Msa0015090 | Msa0098990 | 0.840849 | 6.787576e-58 | -8.615850e-47 |
Msa0017320 | Msa0098990 | 0.802832 | 4.651984e-49 | -8.615850e-47 |
Msa0026910 | Msa0098990 | 0.805687 | 1.183473e-49 | -8.615850e-47 |
Msa0029260 | Msa0098990 | 0.803253 | 3.808127e-49 | -8.615850e-47 |
Msa0043980 | Msa0098990 | 0.817206 | 3.718474e-52 | -8.615850e-47 |
Msa0049750 | Msa0098990 | 0.847514 | 1.102274e-59 | -8.615850e-47 |
Msa0052860 | Msa0098990 | 0.822370 | 2.456189e-53 | -8.615850e-47 |
Msa0055640 | Msa0098990 | 0.802255 | 6.118146e-49 | -8.615850e-47 |
Msa0058310 | Msa0098990 | 0.814352 | 1.609282e-51 | -8.615850e-47 |
Msa0059890 | Msa0098990 | 0.804118 | 2.518475e-49 | -8.615850e-47 |
Msa0071250 | Msa0098990 | 0.815574 | 8.622409e-52 | -8.615850e-47 |
Msa0074750 | Msa0098990 | 0.823229 | 1.549985e-53 | -8.615850e-47 |
Msa0079230 | Msa0098990 | 0.801313 | 9.550167e-49 | -8.615850e-47 |
Msa0079260 | Msa0098990 | 0.822552 | 2.228888e-53 | -8.615850e-47 |
Msa0084430 | Msa0098990 | 0.814473 | 1.513268e-51 | -8.615850e-47 |
Msa0090550 | Msa0098990 | 0.836077 | 1.156147e-56 | -8.615850e-47 |
Msa0096700 | Msa0098990 | 0.974011 | 2.070451e-137 | -8.615850e-47 |
Msa0098930 | Msa0098990 | 0.911866 | 3.742859e-83 | -8.615850e-47 |
Msa0098990 | Msa0111080 | 0.818705 | 1.705410e-52 | -8.615850e-47 |
Msa0098990 | Msa0130520 | 0.804891 | 1.737369e-49 | -8.615850e-47 |
Msa0098990 | Msa0137570 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
Msa0098990 | Msa0138020 | 0.810779 | 9.726599e-51 | -8.615850e-47 |
Msa0098990 | Msa0138640 | 0.812554 | 3.999348e-51 | -8.615850e-47 |
Msa0098990 | Msa0154920 | 0.812594 | 3.919231e-51 | -8.615850e-47 |
Msa0098990 | Msa0169300 | 0.801735 | 7.825776e-49 | -8.615850e-47 |
Msa0098990 | Msa0172000 | 0.829993 | 3.771688e-55 | -8.615850e-47 |
Msa0098990 | Msa0183870 | 0.809777 | 1.600301e-50 | -8.615850e-47 |
Msa0098990 | Msa0186950 | 0.806501 | 7.978690e-50 | -8.615850e-47 |
Msa0098990 | Msa0187490 | 0.828890 | 6.989683e-55 | -8.615850e-47 |
Msa0098990 | Msa0189030 | 0.821951 | 3.073215e-53 | -8.615850e-47 |
Msa0098990 | Msa0190250 | 0.815808 | 7.645919e-52 | -8.615850e-47 |
Msa0098990 | Msa0196670 | 0.809831 | 1.557948e-50 | -8.615850e-47 |
Msa0098990 | Msa0197610 | 0.848327 | 6.576503e-60 | -8.615850e-47 |
Msa0098990 | Msa0206010 | 0.823636 | 1.245165e-53 | -8.615850e-47 |
Msa0098990 | Msa0217680 | 0.813017 | 3.166183e-51 | -8.615850e-47 |
Msa0098990 | Msa0233370 | 0.818990 | 1.469200e-52 | -8.615850e-47 |
Msa0098990 | Msa0244970 | 0.816553 | 5.212866e-52 | -8.615850e-47 |
Msa0098990 | Msa0244980 | 0.808550 | 2.931281e-50 | -8.615850e-47 |
Msa0098990 | Msa0257500 | 0.809408 | 1.920767e-50 | -8.615850e-47 |
Msa0098990 | Msa0262370 | 0.837672 | 4.526140e-57 | -8.615850e-47 |
Msa0098990 | Msa0271580 | 0.825569 | 4.363656e-54 | -8.615850e-47 |
Msa0098990 | Msa0271790 | 0.800279 | 1.552681e-48 | -8.615850e-47 |
Msa0098990 | Msa0285330 | 0.820209 | 7.741471e-53 | -8.615850e-47 |
Msa0098990 | Msa0286670 | 0.808046 | 3.753678e-50 | -8.615850e-47 |
Msa0098990 | Msa0287410 | 0.805601 | 1.233713e-49 | -8.615850e-47 |
Msa0098990 | Msa0290760 | 0.815070 | 1.115920e-51 | -8.615850e-47 |
Msa0098990 | Msa0300150 | 0.855863 | 4.742370e-62 | -8.615850e-47 |
Msa0098990 | Msa0307560 | 0.824488 | 7.854456e-54 | -8.615850e-47 |
Msa0098990 | Msa0308440 | 0.837807 | 4.179555e-57 | -8.615850e-47 |
Msa0098990 | Msa0309270 | 0.818646 | 1.758406e-52 | -8.615850e-47 |
Msa0098990 | Msa0321690 | 0.822666 | 2.096698e-53 | -8.615850e-47 |
Msa0098990 | Msa0326110 | 0.829002 | 6.566169e-55 | -8.615850e-47 |
Msa0098990 | Msa0335060 | 0.806464 | 8.121490e-50 | -8.615850e-47 |
Msa0098990 | Msa0337590 | 0.812365 | 4.398415e-51 | -8.615850e-47 |
Msa0098990 | Msa0376600 | 0.840143 | 1.038098e-57 | -8.615850e-47 |
Msa0098990 | Msa0376910 | 0.816089 | 6.617434e-52 | -8.615850e-47 |
Msa0098990 | Msa0381080 | 0.804701 | 1.903772e-49 | -8.615850e-47 |
Msa0098990 | Msa0385490 | 0.819925 | 8.988534e-53 | -8.615850e-47 |
Msa0098990 | Msa0387050 | 0.812033 | 5.196495e-51 | -8.615850e-47 |
Msa0098990 | Msa0392270 | 0.813784 | 2.147726e-51 | -8.615850e-47 |
Msa0098990 | Msa0403490 | 0.828258 | 9.935767e-55 | -8.615850e-47 |
Msa0098990 | Msa0427580 | 0.832587 | 8.683739e-56 | -8.615850e-47 |
Msa0098990 | Msa0436190 | 0.815129 | 1.082655e-51 | -8.615850e-47 |
Msa0098990 | Msa0467780 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
Msa0098990 | Msa0471900 | 0.823624 | 1.252814e-53 | -8.615850e-47 |
Msa0098990 | Msa0481030 | 0.807073 | 6.040996e-50 | -8.615850e-47 |
Msa0098990 | Msa0481280 | 0.856336 | 3.446089e-62 | -8.615850e-47 |
Msa0098990 | Msa0482940 | 0.805764 | 1.140314e-49 | -8.615850e-47 |
Msa0098990 | Msa0502090 | 0.821304 | 4.334428e-53 | -8.615850e-47 |
Msa0098990 | Msa0518170 | 0.808529 | 2.962296e-50 | -8.615850e-47 |
Msa0098990 | Msa0523050 | 0.803612 | 3.208679e-49 | -8.615850e-47 |
Msa0098990 | Msa0524600 | 0.803108 | 4.080215e-49 | -8.615850e-47 |
Msa0098990 | Msa0530290 | 0.812881 | 3.391149e-51 | -8.615850e-47 |
Msa0098990 | Msa0530650 | 0.807114 | 5.921097e-50 | -8.615850e-47 |
Msa0098990 | Msa0555640 | 0.809096 | 2.240001e-50 | -8.615850e-47 |
Msa0098990 | Msa0566350 | 0.832318 | 1.012003e-55 | -8.615850e-47 |
Msa0098990 | Msa0566750 | 0.817580 | 3.062977e-52 | -8.615850e-47 |
Msa0098990 | Msa0569780 | 0.802274 | 6.065074e-49 | -8.615850e-47 |
Msa0098990 | Msa0588240 | 0.841093 | 5.857485e-58 | -8.615850e-47 |
Msa0098990 | Msa0610130 | 0.820116 | 8.130414e-53 | -8.615850e-47 |
Msa0098990 | Msa0610180 | 0.808008 | 3.823910e-50 | -8.615850e-47 |
Msa0098990 | Msa0620330 | 0.800491 | 1.406022e-48 | -8.615850e-47 |
Msa0098990 | Msa0627350 | 0.805815 | 1.112296e-49 | -8.615850e-47 |
Msa0098990 | Msa0628740 | 0.801311 | 9.561202e-49 | -8.615850e-47 |
Msa0098990 | Msa0654620 | 0.826713 | 2.333068e-54 | -8.615850e-47 |
Msa0098990 | Msa0658680 | 0.810775 | 9.749339e-51 | -8.615850e-47 |
Msa0098990 | Msa0666140 | 0.803799 | 2.933152e-49 | -8.615850e-47 |
Msa0098990 | Msa0673470 | 0.811069 | 8.416412e-51 | -8.615850e-47 |
Msa0098990 | Msa0679550 | 0.801859 | 7.378912e-49 | -8.615850e-47 |
Msa0098990 | Msa0698410 | 0.807415 | 5.111252e-50 | -8.615850e-47 |
Msa0098990 | Msa0701100 | 0.815299 | 9.928359e-52 | -8.615850e-47 |
Msa0098990 | Msa0702370 | 0.801484 | 8.808995e-49 | -8.615850e-47 |
Msa0098990 | Msa0703910 | 0.824666 | 7.134751e-54 | -8.615850e-47 |
Msa0098990 | Msa0705390 | 0.804340 | 2.264614e-49 | -8.615850e-47 |
Msa0098990 | Msa0705990 | 0.833225 | 6.025635e-56 | -8.615850e-47 |
Msa0098990 | Msa0709160 | 0.835521 | 1.598877e-56 | -8.615850e-47 |
Msa0098990 | Msa0726080 | 0.815144 | 1.074320e-51 | -8.615850e-47 |
Msa0098990 | Msa0749440 | 0.804762 | 1.849236e-49 | -8.615850e-47 |
Msa0098990 | Msa0750850 | 0.820061 | 8.366961e-53 | -8.615850e-47 |
Msa0098990 | Msa0760350 | 0.801368 | 9.306071e-49 | -8.615850e-47 |
Msa0098990 | Msa0763890 | 0.811185 | 7.945480e-51 | -8.615850e-47 |
Msa0098990 | Msa0763920 | 0.809618 | 1.731063e-50 | -8.615850e-47 |
Msa0098990 | Msa0764920 | 0.815867 | 7.416993e-52 | -8.615850e-47 |
Msa0098990 | Msa0765180 | 0.856743 | 2.617014e-62 | -8.615850e-47 |
Msa0098990 | Msa0788540 | 0.806003 | 1.015740e-49 | -8.615850e-47 |
Msa0098990 | Msa0801730 | 0.813877 | 2.049353e-51 | -8.615850e-47 |
Msa0098990 | Msa0811040 | 0.803635 | 3.172683e-49 | -8.615850e-47 |
Msa0098990 | Msa0812950 | 0.812530 | 4.047416e-51 | -8.615850e-47 |
Msa0098990 | Msa0831850 | 0.804885 | 1.742641e-49 | -8.615850e-47 |
Msa0098990 | Msa0832150 | 0.806821 | 6.829178e-50 | -8.615850e-47 |
Msa0098990 | Msa0844110 | 0.802798 | 4.728381e-49 | -8.615850e-47 |
Msa0098990 | Msa0844610 | 0.832802 | 7.676954e-56 | -8.615850e-47 |
Msa0098990 | Msa0846230 | 0.820006 | 8.614893e-53 | -8.615850e-47 |
Msa0098990 | Msa0847470 | 0.833410 | 5.418276e-56 | -8.615850e-47 |
Msa0098990 | Msa0861470 | 0.815529 | 8.825170e-52 | -8.615850e-47 |
Msa0098990 | Msa0861570 | 0.816733 | 4.750197e-52 | -8.615850e-47 |
Msa0098990 | Msa0877710 | 0.809408 | 1.920767e-50 | -8.615850e-47 |
Msa0098990 | Msa0880810 | 0.811941 | 5.440653e-51 | -8.615850e-47 |
Msa0098990 | Msa0930140 | 0.812608 | 3.891983e-51 | -8.615850e-47 |
Msa0098990 | Msa0932570 | 0.805284 | 1.437728e-49 | -8.615850e-47 |
Msa0098990 | Msa0958030 | 0.819299 | 1.249010e-52 | -8.615850e-47 |
Msa0098990 | Msa0958920 | 0.816171 | 6.345393e-52 | -8.615850e-47 |
Msa0098990 | Msa0970530 | 0.833980 | 3.905080e-56 | -8.615850e-47 |
Msa0098990 | Msa0970600 | 0.834402 | 3.061024e-56 | -8.615850e-47 |
Msa0098990 | Msa0980020 | 0.800784 | 1.225023e-48 | -8.615850e-47 |
Msa0098990 | Msa0992580 | 0.830012 | 3.730812e-55 | -8.615850e-47 |
Msa0098990 | Msa0992600 | 0.805751 | 1.147281e-49 | -8.615850e-47 |
Msa0098990 | Msa0994370 | 0.816077 | 6.659299e-52 | -8.615850e-47 |
Msa0098990 | Msa1024680 | 0.810477 | 1.130704e-50 | -8.615850e-47 |
Msa0098990 | Msa1024750 | 0.806488 | 8.027569e-50 | -8.615850e-47 |
Msa0098990 | Msa1026410 | 0.812522 | 4.063474e-51 | -8.615850e-47 |
Msa0098990 | Msa1026640 | 0.822895 | 1.854255e-53 | -8.615850e-47 |
Msa0098990 | Msa1063420 | 0.815980 | 7.001362e-52 | -8.615850e-47 |
Msa0098990 | Msa1071320 | 0.825341 | 4.941879e-54 | -8.615850e-47 |
Msa0098990 | Msa1077070 | 0.835714 | 1.428835e-56 | -8.615850e-47 |
Msa0098990 | Msa1077340 | 0.812034 | 5.194758e-51 | -8.615850e-47 |
Msa0098990 | Msa1082250 | 0.807641 | 4.578075e-50 | -8.615850e-47 |
Msa0098990 | Msa1084270 | 0.812211 | 4.751581e-51 | -8.615850e-47 |
Msa0098990 | Msa1107260 | 0.831481 | 1.629368e-55 | -8.615850e-47 |
Msa0098990 | Msa1115280 | 0.815732 | 7.949857e-52 | -8.615850e-47 |
Msa0098990 | Msa1122780 | 0.822778 | 1.974462e-53 | -8.615850e-47 |
Msa0098990 | Msa1130530 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
Msa0098990 | Msa1140230 | 0.809019 | 2.327107e-50 | -8.615850e-47 |
Msa0098990 | Msa1144040 | 0.844489 | 7.326958e-59 | -8.615850e-47 |
Msa0098990 | Msa1150900 | 0.837482 | 5.063595e-57 | -8.615850e-47 |
Msa0098990 | Msa1163870 | 0.821947 | 3.079413e-53 | -8.615850e-47 |
Msa0098990 | Msa1185460 | 0.808116 | 3.627069e-50 | -8.615850e-47 |
Msa0098990 | Msa1187590 | 0.805082 | 1.584822e-49 | -8.615850e-47 |
Msa0098990 | Msa1208370 | 0.845020 | 5.268356e-59 | -8.615850e-47 |
Msa0098990 | Msa1208380 | 0.842218 | 2.957734e-58 | -8.615850e-47 |
Msa0098990 | Msa1209190 | 0.827622 | 1.413283e-54 | -8.615850e-47 |
Msa0098990 | Msa1209860 | 0.814244 | 1.700517e-51 | -8.615850e-47 |
Msa0098990 | Msa1218580 | 0.813407 | 2.599465e-51 | -8.615850e-47 |
Msa0098990 | Msa1250110 | 0.806286 | 8.856795e-50 | -8.615850e-47 |
Msa0098990 | Msa1250730 | 0.801198 | 1.008230e-48 | -8.615850e-47 |
Msa0098990 | Msa1259530 | 0.803347 | 3.640418e-49 | -8.615850e-47 |
Msa0098990 | Msa1270660 | 0.838268 | 3.181509e-57 | -8.615850e-47 |
Msa0098990 | Msa1270730 | 0.836085 | 1.150230e-56 | -8.615850e-47 |
Msa0098990 | Msa1274510 | 0.801608 | 8.308044e-49 | -8.615850e-47 |
Msa0098990 | Msa1291450 | 0.809714 | 1.650428e-50 | -8.615850e-47 |
Msa0098990 | Msa1295930 | 0.858045 | 1.078191e-62 | -8.615850e-47 |
Msa0098990 | Msa1307180 | 0.801486 | 8.803761e-49 | -8.615850e-47 |
Msa0098990 | Msa1316360 | 0.802112 | 6.548793e-49 | -8.615850e-47 |
Msa0098990 | Msa1335230 | 0.820256 | 7.550793e-53 | -8.615850e-47 |
Msa0098990 | Msa1336040 | 0.811168 | 8.010703e-51 | -8.615850e-47 |
Msa0098990 | Msa1337170 | 0.814085 | 1.843257e-51 | -8.615850e-47 |
Msa0098990 | Msa1341490 | 0.810149 | 1.330273e-50 | -8.615850e-47 |
Msa0098990 | Msa1344660 | 0.822673 | 2.088228e-53 | -8.615850e-47 |
Msa0098990 | Msa1349450 | 0.805241 | 1.467644e-49 | -8.615850e-47 |
Msa0098990 | Msa1351550 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
Msa0098990 | Msa1357430 | 0.801301 | 9.607035e-49 | -8.615850e-47 |
Msa0098990 | Msa1364370 | 0.822201 | 2.688062e-53 | -8.615850e-47 |
Msa0098990 | Msa1370590 | 0.802282 | 6.041925e-49 | -8.615850e-47 |
Msa0098990 | Msa1371240 | 0.830099 | 3.553084e-55 | -8.615850e-47 |
Msa0098990 | Msa1371940 | 0.805132 | 1.547333e-49 | -8.615850e-47 |
Msa0098990 | Msa1372290 | 0.801764 | 7.719374e-49 | -8.615850e-47 |
Msa0098990 | Msa1372580 | 0.833300 | 5.774171e-56 | -8.615850e-47 |
Msa0098990 | Msa1376130 | 0.802188 | 6.314763e-49 | -8.615850e-47 |
Msa0098990 | Msa1382020 | 0.808398 | 3.158724e-50 | -8.615850e-47 |
Msa0098990 | Msa1384100 | 0.804256 | 2.356712e-49 | -8.615850e-47 |
Msa0098990 | Msa1388860 | 0.810124 | 1.347005e-50 | -8.615850e-47 |
Msa0098990 | Msa1397120 | 0.807342 | 5.296152e-50 | -8.615850e-47 |
Msa0098990 | Msa1403890 | 0.806084 | 9.767904e-50 | -8.615850e-47 |
Msa0098990 | Msa1407470 | 0.811977 | 5.344615e-51 | -8.615850e-47 |
Msa0098990 | Msa1407600 | 0.802383 | 5.759352e-49 | -8.615850e-47 |
Msa0098990 | Msa1407970 | 0.801824 | 7.501900e-49 | -8.615850e-47 |
Msa0098990 | Msa1412070 | 0.829635 | 4.609766e-55 | -8.615850e-47 |
Msa0098990 | Msa1423820 | 0.822691 | 2.068376e-53 | -8.615850e-47 |
Msa0098990 | Msa1428780 | 0.800645 | 1.307640e-48 | -8.615850e-47 |
Msa0098990 | Msa1430130 | 0.805933 | 1.050677e-49 | -8.615850e-47 |
Msa0098990 | Msa1432630 | 0.830091 | 3.569164e-55 | -8.615850e-47 |
Msa0098990 | Msa1436600 | 0.812547 | 4.013030e-51 | -8.615850e-47 |
Msa0098990 | Msa1437130 | 0.829525 | 4.902621e-55 | -8.615850e-47 |
Msa0098990 | Msa1437330 | 0.837633 | 4.631757e-57 | -8.615850e-47 |
Msa0098990 | Msa1438840 | 0.831797 | 1.361603e-55 | -8.615850e-47 |
Msa0098990 | Msa1442790 | 0.820214 | 7.720925e-53 | -8.615850e-47 |
Msa0098990 | Msa1458810 | 0.833116 | 6.416276e-56 | -8.615850e-47 |
Msa0098990 | Msa1460750 | 0.804712 | 1.894196e-49 | -8.615850e-47 |
Msa0098990 | Msa1463600 | 0.817343 | 3.464462e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0098990 | MtrunA17_Chr1g0151421 | 94.915 | 354 | 0 | 1 | 41 | 376 | 3 | 356 | 0.0 | 677 |
Msa0098990 | MtrunA17_Chr1g0153571 | 94.618 | 353 | 2 | 1 | 41 | 376 | 3 | 355 | 0.0 | 672 |
Msa0098990 | MtrunA17_Chr1g0184451 | 34.564 | 298 | 143 | 10 | 75 | 364 | 17 | 270 | 1.12e-41 | 147 |
Msa0098990 | MtrunA17_Chr6g0485031 | 40.000 | 180 | 103 | 3 | 76 | 255 | 173 | 347 | 5.73e-31 | 123 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0098990 | AT5G50960.1 | 74.000 | 350 | 71 | 3 | 41 | 372 | 3 | 350 | 0.0 | 528 |
Msa0098990 | AT4G19540.1 | 43.005 | 193 | 100 | 5 | 75 | 264 | 38 | 223 | 7.37e-38 | 139 |
Msa0098990 | AT3G24430.1 | 39.444 | 180 | 104 | 3 | 76 | 255 | 172 | 346 | 4.49e-31 | 124 |
Find 99 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGATTAAATTCAGCATTTC+AGG | 0.187756 | 1_3:+5032579 | None:intergenic |
CCTTCTAGGCCAAGCATCTT+TGG | 0.224706 | 1_3:+5033080 | None:intergenic |
TACATAAGGTTATTATTATA+AGG | 0.233405 | 1_3:-5031990 | Msa0098990:three_prime_UTR |
GGTGTATCTCTTGACCTTCT+AGG | 0.281189 | 1_3:+5033066 | None:intergenic |
ATAATTCTTTCAAACACTTC+TGG | 0.300011 | 1_3:+5032035 | None:intergenic |
ATCCAGACGAAGCTGTTATA+TGG | 0.325193 | 1_3:-5032968 | Msa0098990:CDS |
TTTATGAAGATTACAGATAA+TGG | 0.328286 | 1_3:-5032654 | Msa0098990:CDS |
GAGATGGCGGTACCCTTTCT+TGG | 0.328779 | 1_3:-5032504 | Msa0098990:CDS |
AATCTCGGGGTCATGTCAAT+TGG | 0.348522 | 1_3:-5033005 | Msa0098990:CDS |
CTTCTAGGCCAAGCATCTTT+GGG | 0.359162 | 1_3:+5033081 | None:intergenic |
CATACGTTCGTTGGCATCCT+CGG | 0.362541 | 1_3:+5036629 | None:intergenic |
AAAGTTGGAGTGAAAGTTCT+TGG | 0.364693 | 1_3:-5032726 | Msa0098990:CDS |
TTGAAAGCTATTTATACATA+AGG | 0.368274 | 1_3:-5032004 | Msa0098990:three_prime_UTR |
TTTCACAGTGGCCATTCTTT+CGG | 0.375809 | 1_3:+5033235 | None:intergenic |
CTAATTGTTGATGCTCCGCC+TGG | 0.377996 | 1_3:-5032876 | Msa0098990:CDS |
CAGCTAACGCAAATGCCAGC+TGG | 0.379548 | 1_3:+5033156 | None:intergenic |
CCAAAGATGCTTGGCCTAGA+AGG | 0.402010 | 1_3:-5033080 | Msa0098990:CDS |
CCAAGCATCTTTGGGATGCT+TGG | 0.406720 | 1_3:+5033089 | None:intergenic |
CTACAATGTCACAAACAAAC+TGG | 0.407779 | 1_3:+5032124 | None:intergenic |
GTCTATGTTGAGTCTAATCT+CGG | 0.416769 | 1_3:-5033020 | Msa0098990:CDS |
CACTGTGAAACATAAGATAC+TGG | 0.420840 | 1_3:-5033222 | Msa0098990:CDS |
AAGTTGGAGTGAAAGTTCTT+GGG | 0.429446 | 1_3:-5032725 | Msa0098990:CDS |
GGCGGTACCCTTTCTTGGTA+AGG | 0.430728 | 1_3:-5032499 | Msa0098990:CDS |
CATAAGATACTGGTCTTGTC+AGG | 0.432544 | 1_3:-5033212 | Msa0098990:CDS |
TAAAGGAACCTTACCAAGAA+AGG | 0.434925 | 1_3:+5032491 | None:intergenic |
AGATGTTACGGAGTGGATAT+CGG | 0.437420 | 1_3:-5032622 | Msa0098990:CDS |
ACTTGAGATTTGAGATGGGC+TGG | 0.443213 | 1_3:+5032676 | None:intergenic |
AGCTAACGCAAATGCCAGCT+GGG | 0.447107 | 1_3:+5033157 | None:intergenic |
GCAGAATCAGACTGAGGACC+TGG | 0.452269 | 1_3:+5036500 | None:intergenic |
CTCCATATAACAGCTTCGTC+TGG | 0.454307 | 1_3:+5032966 | None:intergenic |
CATAAACTTGAGATTTGAGA+TGG | 0.455458 | 1_3:+5032671 | None:intergenic |
ATACGTTCGTTGGCATCCTC+GGG | 0.457202 | 1_3:+5036630 | None:intergenic |
CGTCTACATTAGCAGCATCT+AGG | 0.458881 | 1_3:+5032820 | None:intergenic |
CTTCTGGACATTGATATTTG+TGG | 0.463857 | 1_3:-5033113 | Msa0098990:CDS |
AGAGAAGAGAAGAGCTTCCA+TGG | 0.467899 | 1_3:-5036670 | Msa0098990:CDS |
ATCTCGGGGTCATGTCAATT+GGG | 0.470649 | 1_3:-5033004 | Msa0098990:CDS |
CTTTGCAAGGCAGCCGAAGA+AGG | 0.473054 | 1_3:-5032459 | Msa0098990:CDS |
TGGTGAGATGAAAGATGTTA+CGG | 0.483466 | 1_3:-5032634 | Msa0098990:CDS |
GGTCCTCAGTCTGATTCTGC+TGG | 0.484126 | 1_3:-5036497 | Msa0098990:CDS |
ATGTGTTCATCTGAGGTTCC+AGG | 0.485714 | 1_3:+5032858 | None:intergenic |
GGCATTTGCGTTAGCTGCAA+GGG | 0.486589 | 1_3:-5033150 | Msa0098990:CDS |
GAGACCAACCAAGGTTGCTC+TGG | 0.487893 | 1_3:+5033045 | None:intergenic |
ACAATCTTTATCTGCAAAGC+AGG | 0.488362 | 1_3:+5032431 | None:intergenic |
AAAGCAGGATCTGCCTTCTT+CGG | 0.495633 | 1_3:+5032446 | None:intergenic |
GATTTGAGATGGGCTGGGAC+AGG | 0.504393 | 1_3:+5032682 | None:intergenic |
TTGCAAAGCTGTGGATCTAA+AGG | 0.505094 | 1_3:+5032474 | None:intergenic |
AAATATATTCATACGTTCGT+TGG | 0.505708 | 1_3:+5036620 | None:intergenic |
GGTTGCCATTGCCGAAAGAA+TGG | 0.507040 | 1_3:-5033246 | Msa0098990:CDS |
TATATCTCCGTTGTTCTCCA+TGG | 0.511044 | 1_3:+5036653 | None:intergenic |
ATACTGGTCTTGTCAGGAAA+GGG | 0.511385 | 1_3:-5033206 | Msa0098990:CDS |
CTTGAGATTTGAGATGGGCT+GGG | 0.511450 | 1_3:+5032677 | None:intergenic |
GTATTTGATAGTAGCGGTGG+TGG | 0.514266 | 1_3:-5032546 | Msa0098990:CDS |
AGTCATCGTCGTCACCCGCC+AGG | 0.519376 | 1_3:-5036948 | Msa0098990:intron |
AAAGGAACCTTACCAAGAAA+GGG | 0.525559 | 1_3:+5032492 | None:intergenic |
TGGCATTTGCGTTAGCTGCA+AGG | 0.531152 | 1_3:-5033151 | Msa0098990:CDS |
CCAAGCATCCCAAAGATGCT+TGG | 0.531277 | 1_3:-5033089 | Msa0098990:CDS |
TCTATGTTGAGTCTAATCTC+GGG | 0.532182 | 1_3:-5033019 | Msa0098990:CDS |
GATAAGCTGATGGAAACTAG+TGG | 0.534659 | 1_3:-5032375 | Msa0098990:CDS |
GAGATACACCAGAGCAACCT+TGG | 0.541471 | 1_3:-5033053 | Msa0098990:CDS |
CTGGCATTTACAGATTGCCC+AGG | 0.541633 | 1_3:-5036518 | Msa0098990:intron |
GATACTGGTCTTGTCAGGAA+AGG | 0.542244 | 1_3:-5033207 | Msa0098990:CDS |
AGTGGCCATTCTTTCGGCAA+TGG | 0.546079 | 1_3:+5033241 | None:intergenic |
TTGTCAGGAAAGGGAGGTGT+TGG | 0.547516 | 1_3:-5033197 | Msa0098990:CDS |
TCGGCTGCCTTGCAAAGCTG+TGG | 0.547932 | 1_3:+5032465 | None:intergenic |
TACACCAGAGCAACCTTGGT+TGG | 0.551299 | 1_3:-5033049 | Msa0098990:CDS |
AGTTGGAGTGAAAGTTCTTG+GGG | 0.553652 | 1_3:-5032724 | Msa0098990:CDS |
ATAACAGCTTCGTCTGGATG+AGG | 0.554608 | 1_3:+5032972 | None:intergenic |
AGATTAGACTCAACATAGAC+AGG | 0.558926 | 1_3:+5033023 | None:intergenic |
AATTGAAATGTGTTCATCTG+AGG | 0.559191 | 1_3:+5032851 | None:intergenic |
ATAAACTTGAGATTTGAGAT+GGG | 0.559421 | 1_3:+5032672 | None:intergenic |
AAAGATAATAGATAAGCTGA+TGG | 0.562227 | 1_3:-5032385 | Msa0098990:CDS |
AACTAGTGGGCTGTCAATGA+CGG | 0.568788 | 1_3:-5032361 | Msa0098990:CDS |
ACTATCAAATACTTCACTGC+AGG | 0.571986 | 1_3:+5032557 | None:intergenic |
CTGTCAATGACGGAAAGCAA+TGG | 0.575375 | 1_3:-5032351 | Msa0098990:CDS |
GACGAAGCTGTTATATGGAG+AGG | 0.584494 | 1_3:-5032963 | Msa0098990:CDS |
TATCAGAAACAAACACCTGC+CGG | 0.594674 | 1_3:-5036971 | Msa0098990:CDS |
ATAAGCTGATGGAAACTAGT+GGG | 0.602164 | 1_3:-5032374 | Msa0098990:CDS |
TTTAGATCCACAGCTTTGCA+AGG | 0.603851 | 1_3:-5032472 | Msa0098990:CDS |
GTTGAAGATGTGTAACGAGA+TGG | 0.614173 | 1_3:-5032520 | Msa0098990:CDS |
CAGAATCAGACTGAGGACCT+GGG | 0.614924 | 1_3:+5036501 | None:intergenic |
GCGGGTGACGACGATGACTC+CGG | 0.617264 | 1_3:+5036952 | None:intergenic |
AAGAGAGACTTGTTGAGGAG+TGG | 0.628280 | 1_3:+5032782 | None:intergenic |
GTGACGACGATGACTCCGGC+AGG | 0.628500 | 1_3:+5036956 | None:intergenic |
AGATGAAAGATGTTACGGAG+TGG | 0.628653 | 1_3:-5032629 | Msa0098990:CDS |
CTAGATGCTGCTAATGTAGA+CGG | 0.629983 | 1_3:-5032819 | Msa0098990:CDS |
CTGGTCTTGTCAGGAAAGGG+AGG | 0.640582 | 1_3:-5033203 | Msa0098990:CDS |
GAAGTATTTGATAGTAGCGG+TGG | 0.649921 | 1_3:-5032549 | Msa0098990:CDS |
TCAATAAGAGAGACTTGTTG+AGG | 0.650660 | 1_3:+5032777 | None:intergenic |
CTATGTTGAGTCTAATCTCG+GGG | 0.653466 | 1_3:-5033018 | Msa0098990:CDS |
AGTGAAGTATTTGATAGTAG+CGG | 0.680092 | 1_3:-5032552 | Msa0098990:CDS |
AGAGCTTCCATGGAGAACAA+CGG | 0.682274 | 1_3:-5036660 | Msa0098990:CDS |
GGAAAATCTGATGCATGTGA+AGG | 0.682695 | 1_3:-5036476 | Msa0098990:intron |
GGGGTTGTAGAGAATATGAG+TGG | 0.686460 | 1_3:-5032705 | Msa0098990:CDS |
TTTCCAGCAGAATCAGACTG+AGG | 0.699719 | 1_3:+5036494 | None:intergenic |
CATAGACAGGAGACCAACCA+AGG | 0.702138 | 1_3:+5033036 | None:intergenic |
GAAGATGTGTAACGAGATGG+CGG | 0.710160 | 1_3:-5032517 | Msa0098990:CDS |
GAACAACGGAGATATACCCG+AGG | 0.745436 | 1_3:-5036646 | Msa0098990:CDS |
CAGTATCTTATGTTTCACAG+TGG | 0.751734 | 1_3:+5033223 | None:intergenic |
TGTTCATCTGAGGTTCCAGG+CGG | 0.754863 | 1_3:+5032861 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATCAATTATTTTAACAAA+CGG | + | chr1_3:5032274-5032293 | None:intergenic | 10.0% |
!!! | ATATTTTTCTTAACATAAAT+TGG | - | chr1_3:5035561-5035580 | Msa0098990:intron | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034571-5034590 | Msa0098990:intron | 100.0% |
!!! | AACCATTTTTATCTATTTAA+AGG | - | chr1_3:5034930-5034949 | Msa0098990:intron | 15.0% |
!! | ATCCTTTAAATAGATAAAAA+TGG | + | chr1_3:5034935-5034954 | None:intergenic | 15.0% |
!!! | TTTTTATCTATTTAAAGGAT+TGG | - | chr1_3:5034935-5034954 | Msa0098990:intron | 15.0% |
!! | TTAGAAATATTTCGATAATT+TGG | - | chr1_3:5035002-5035021 | Msa0098990:intron | 15.0% |
!!! | ATGTAAAATTAAGTTTTATG+CGG | - | chr1_3:5036763-5036782 | Msa0098990:intron | 15.0% |
!! | AAAGTAAGAAATATAGAAGA+GGG | + | chr1_3:5032136-5032155 | None:intergenic | 20.0% |
!! | CTATATTTCTTACTTTCAAT+TGG | - | chr1_3:5032140-5032159 | Msa0098990:three_prime_UTR | 20.0% |
!! | GAACAAGCTTATATAAATAA+GGG | + | chr1_3:5032924-5032943 | None:intergenic | 20.0% |
!! | TGAACAAGCTTATATAAATA+AGG | + | chr1_3:5032925-5032944 | None:intergenic | 20.0% |
!! | ATCATTATCATTGCTTATTT+GGG | - | chr1_3:5033047-5033066 | Msa0098990:CDS | 20.0% |
!!! | AGTATTTTATTATAGCCAAA+TGG | + | chr1_3:5033781-5033800 | None:intergenic | 20.0% |
!! | TATAGAAATAGATCAAACAA+TGG | + | chr1_3:5034195-5034214 | None:intergenic | 20.0% |
!! | ATAGAATATTTAAAGAGCAA+AGG | + | chr1_3:5034339-5034358 | None:intergenic | 20.0% |
!!! | GCTCTTTAAATATTCTATTT+TGG | - | chr1_3:5034341-5034360 | Msa0098990:intron | 20.0% |
!!! | CTGAAATTTAATTTAGTTCA+TGG | + | chr1_3:5034489-5034508 | None:intergenic | 20.0% |
!!! | AGTGAAATGTTTATTTTAGA+AGG | + | chr1_3:5035349-5035368 | None:intergenic | 20.0% |
!! | ATCATTCTTCAAACTATTAT+TGG | + | chr1_3:5035439-5035458 | None:intergenic | 20.0% |
!! | CCAAAGAGAATATTTATAAT+CGG | + | chr1_3:5035496-5035515 | None:intergenic | 20.0% |
!!! | CATTTTCATTTTTTTTGCAT+TGG | - | chr1_3:5035720-5035739 | Msa0098990:intron | 20.0% |
!!! | AGTTTTTAAAAGACGTTTAT+TGG | - | chr1_3:5036088-5036107 | Msa0098990:intron | 20.0% |
!!! | GTTTTTAAAAGACGTTTATT+GGG | - | chr1_3:5036089-5036108 | Msa0098990:intron | 20.0% |
!!! | TTTTTAAAAGACGTTTATTG+GGG | - | chr1_3:5036090-5036109 | Msa0098990:intron | 20.0% |
!! | TTTATGAAGATTACAGATAA+TGG | - | chr1_3:5036348-5036367 | Msa0098990:intron | 20.0% |
!!! | GCATAAAACTTAATTTTACA+TGG | + | chr1_3:5036764-5036783 | None:intergenic | 20.0% |
!! | TTGAAAGCTATTTATACATA+AGG | - | chr1_3:5036998-5037017 | Msa0098990:CDS | 20.0% |
! | GAAAGTAAGAAATATAGAAG+AGG | + | chr1_3:5032137-5032156 | None:intergenic | 25.0% |
!! | ATGTGGTTTCTAATTTTGAA+TGG | - | chr1_3:5032174-5032193 | Msa0098990:three_prime_UTR | 25.0% |
!!! | GATTCTAAAATCATACTCTT+TGG | - | chr1_3:5032214-5032233 | Msa0098990:three_prime_UTR | 25.0% |
! | AAATATATTCATACGTTCGT+TGG | + | chr1_3:5032385-5032404 | None:intergenic | 25.0% |
!! | AACATAAAAGCATAAGAGAA+AGG | + | chr1_3:5032616-5032635 | None:intergenic | 25.0% |
! | CACTTAATCATTTATCATGT+AGG | - | chr1_3:5032673-5032692 | Msa0098990:CDS | 25.0% |
! | AATCCTAGAACTTAAAAGAA+TGG | + | chr1_3:5032952-5032971 | None:intergenic | 25.0% |
!!! | TTCTTTTAAGTTCTAGGATT+TGG | - | chr1_3:5032952-5032971 | Msa0098990:CDS | 25.0% |
!!! | TCTTTTAAGTTCTAGGATTT+GGG | - | chr1_3:5032953-5032972 | Msa0098990:CDS | 25.0% |
! | CATCATTATCATTGCTTATT+TGG | - | chr1_3:5033046-5033065 | Msa0098990:CDS | 25.0% |
!! | ATAAAATGTTTCACTAGTCT+TGG | + | chr1_3:5033145-5033164 | None:intergenic | 25.0% |
!!! | TGCTTAGTTTGTTTATTGTT+TGG | - | chr1_3:5033177-5033196 | Msa0098990:CDS | 25.0% |
!!! | TTATTGTTTGGTCTTGTTAT+AGG | - | chr1_3:5033189-5033208 | Msa0098990:CDS | 25.0% |
!!! | TATTGTTTGGTCTTGTTATA+GGG | - | chr1_3:5033190-5033209 | Msa0098990:CDS | 25.0% |
! | ATTTGTTCAATTTGTGAAGT+TGG | - | chr1_3:5033261-5033280 | Msa0098990:intron | 25.0% |
! | CTAGTCATGAATTATTAAGT+TGG | + | chr1_3:5033336-5033355 | None:intergenic | 25.0% |
! | GAAACAAAGTGACATTATAT+AGG | - | chr1_3:5033439-5033458 | Msa0098990:intron | 25.0% |
! | GTATATTGTAATAAAGAGTG+TGG | - | chr1_3:5033931-5033950 | Msa0098990:intron | 25.0% |
! | AGGATATTAAATAAAGAGTG+TGG | - | chr1_3:5033956-5033975 | Msa0098990:intron | 25.0% |
!! | TATTAAATAAAGAGTGTGGT+AGG | - | chr1_3:5033960-5033979 | Msa0098990:intron | 25.0% |
! | AGAGTGTATTTATTTGATGA+AGG | + | chr1_3:5034167-5034186 | None:intergenic | 25.0% |
! | AATCAAAGATGCAATATGAT+AGG | + | chr1_3:5034246-5034265 | None:intergenic | 25.0% |
! | GAACATTGAAGAAGAAATTT+AGG | - | chr1_3:5034773-5034792 | Msa0098990:intron | 25.0% |
! | AAAATTGAATCCTTCTTGAT+TGG | + | chr1_3:5035050-5035069 | None:intergenic | 25.0% |
!! | ATATTTATAATCGGTTTCAG+AGG | + | chr1_3:5035487-5035506 | None:intergenic | 25.0% |
! | CCGATTATAAATATTCTCTT+TGG | - | chr1_3:5035493-5035512 | Msa0098990:intron | 25.0% |
! | AAATATGACATCAAGAAAGT+AGG | + | chr1_3:5035595-5035614 | None:intergenic | 25.0% |
!!! | TATTTTTTCTGTATGACACT+TGG | - | chr1_3:5035610-5035629 | Msa0098990:intron | 25.0% |
!!! | ATTTTTTCTGTATGACACTT+GGG | - | chr1_3:5035611-5035630 | Msa0098990:intron | 25.0% |
!!! | TAGGGCATTTCTTAATTTTA+TGG | - | chr1_3:5035645-5035664 | Msa0098990:intron | 25.0% |
!! | ATAAACTTGAGATTTGAGAT+GGG | + | chr1_3:5036333-5036352 | None:intergenic | 25.0% |
! | AAAGATAATAGATAAGCTGA+TGG | - | chr1_3:5036617-5036636 | Msa0098990:intron | 25.0% |
!! | AAACGAATTTTCTGTCAATT+AGG | + | chr1_3:5036729-5036748 | None:intergenic | 25.0% |
! | ATAATTCTTTCAAACACTTC+TGG | + | chr1_3:5036970-5036989 | None:intergenic | 25.0% |
! | CGTAAAATGAGAACTTTTGA+TGG | + | chr1_3:5032011-5032030 | None:intergenic | 30.0% |
AATTGGTGTGTTTGATTATG+TGG | - | chr1_3:5032157-5032176 | Msa0098990:three_prime_UTR | 30.0% | |
TACACAAGAATCAAAGTCAA+TGG | + | chr1_3:5032451-5032470 | None:intergenic | 30.0% | |
! | TGTGTATTTTGTATTGTTGC+TGG | - | chr1_3:5032465-5032484 | Msa0098990:CDS | 30.0% |
!! | TTGCACAAATTTGCTGATTT+GGG | + | chr1_3:5032555-5032574 | None:intergenic | 30.0% |
GTTTATTTCCAATGACCATT+AGG | - | chr1_3:5032633-5032652 | Msa0098990:CDS | 30.0% | |
TAAGTGCGTTTAATCAAACA+GGG | + | chr1_3:5032659-5032678 | None:intergenic | 30.0% | |
TTAAGTGCGTTTAATCAAAC+AGG | + | chr1_3:5032660-5032679 | None:intergenic | 30.0% | |
!! | CTTGTTTTCATAAACTCTAC+GGG | + | chr1_3:5032789-5032808 | None:intergenic | 30.0% |
!!! | CCTTGTTTTCATAAACTCTA+CGG | + | chr1_3:5032790-5032809 | None:intergenic | 30.0% |
TGAAACAGTGTATGGATAAT+TGG | - | chr1_3:5032810-5032829 | Msa0098990:CDS | 30.0% | |
! | AAATAAGGGTTTGTTTCGAT+TGG | + | chr1_3:5032910-5032929 | None:intergenic | 30.0% |
!!! | ACACCATTCTTTTAAGTTCT+AGG | - | chr1_3:5032946-5032965 | Msa0098990:CDS | 30.0% |
ATTGTAGTGTGATTTCTTTC+CGG | - | chr1_3:5033020-5033039 | Msa0098990:CDS | 30.0% | |
AATCAGCTCTATCATAGTTA+TGG | - | chr1_3:5033094-5033113 | Msa0098990:CDS | 30.0% | |
TTATAGGGTTGTTAATTCCT+TGG | - | chr1_3:5033205-5033224 | Msa0098990:CDS | 30.0% | |
TATAGGGTTGTTAATTCCTT+GGG | - | chr1_3:5033206-5033225 | Msa0098990:CDS | 30.0% | |
GTTCATTTCATAGTTGTCAA+AGG | + | chr1_3:5033291-5033310 | None:intergenic | 30.0% | |
! | TATGACACGTTTGCTAAAAT+CGG | + | chr1_3:5033565-5033584 | None:intergenic | 30.0% |
TGATAAAGACTTAAGCCATT+TGG | - | chr1_3:5033763-5033782 | Msa0098990:intron | 30.0% | |
! | TTGTAATAAAGAGTGTGGTT+AGG | - | chr1_3:5033936-5033955 | Msa0098990:intron | 30.0% |
TTATGCCTCAGTTGTATAAA+TGG | - | chr1_3:5034003-5034022 | Msa0098990:intron | 30.0% | |
! | CGATTTCTGCTTCTAAATTT+TGG | - | chr1_3:5034217-5034236 | Msa0098990:intron | 30.0% |
! | AAAGTATTAGATGTAGGTTG+TGG | + | chr1_3:5034312-5034331 | None:intergenic | 30.0% |
GAATATTTAAAGAGCAAAGG+TGG | + | chr1_3:5034336-5034355 | None:intergenic | 30.0% | |
AATTATTCATTGCACAATCC+AGG | - | chr1_3:5034407-5034426 | Msa0098990:intron | 30.0% | |
ATTATTCATTGCACAATCCA+GGG | - | chr1_3:5034408-5034427 | Msa0098990:intron | 30.0% | |
ACAGGCTTATATTTCTCTAA+CGG | + | chr1_3:5034528-5034547 | None:intergenic | 30.0% | |
! | TTTGTAATGGAGTAGTGTTA+GGG | - | chr1_3:5034659-5034678 | Msa0098990:intron | 30.0% |
TGAAGAAGAAATTTAGGAAG+TGG | - | chr1_3:5034779-5034798 | Msa0098990:intron | 30.0% | |
! | TTTGATCCCTTTGAAAATGT+CGG | - | chr1_3:5034827-5034846 | Msa0098990:intron | 30.0% |
GATTGGTGAATGACATAAAA+AGG | - | chr1_3:5034952-5034971 | Msa0098990:intron | 30.0% | |
GAGAAATGCTAGTTGTAATT+TGG | - | chr1_3:5034978-5034997 | Msa0098990:intron | 30.0% | |
GTCATATGATATGTTGCATT+GGG | - | chr1_3:5035097-5035116 | Msa0098990:intron | 30.0% | |
TCATATGATATGTTGCATTG+GGG | - | chr1_3:5035098-5035117 | Msa0098990:intron | 30.0% | |
GGTTATTCAATTAGATCTGT+GGG | - | chr1_3:5035119-5035138 | Msa0098990:intron | 30.0% | |
! | AATTGTATCAGTTTTTCCTG+TGG | - | chr1_3:5035168-5035187 | Msa0098990:intron | 30.0% |
!! | TGGGAGATTTTAGTCAATTT+TGG | - | chr1_3:5035200-5035219 | Msa0098990:intron | 30.0% |
!!! | TTTTGGTTTTTATTGCTTCC+TGG | - | chr1_3:5035217-5035236 | Msa0098990:intron | 30.0% |
GCTTAACTAACTGAAAAACA+CGG | + | chr1_3:5035245-5035264 | None:intergenic | 30.0% | |
ACAAACAATGCTTCTAAACA+AGG | + | chr1_3:5035267-5035286 | None:intergenic | 30.0% | |
TGCCATTGTTTCAAAGTTAA+TGG | - | chr1_3:5035528-5035547 | Msa0098990:intron | 30.0% | |
!! | CACCATTAACTTTGAAACAA+TGG | + | chr1_3:5035533-5035552 | None:intergenic | 30.0% |
ACCAAAATGCTTAAACATGA+AGG | + | chr1_3:5035698-5035717 | None:intergenic | 30.0% | |
AATTGAAATGTGTTCATCTG+AGG | + | chr1_3:5036154-5036173 | None:intergenic | 30.0% | |
! | GTGAATTTTTGCAAGAAAGT+TGG | - | chr1_3:5036261-5036280 | Msa0098990:intron | 30.0% |
CATAAACTTGAGATTTGAGA+TGG | + | chr1_3:5036334-5036353 | None:intergenic | 30.0% | |
! | AGTGAAGTATTTGATAGTAG+CGG | - | chr1_3:5036450-5036469 | Msa0098990:intron | 30.0% |
! | TCTATTATCTTTTGTAACGC+TGG | + | chr1_3:5036609-5036628 | None:intergenic | 30.0% |
!! | AATTAAGTTTTATGCGGTTG+AGG | - | chr1_3:5036769-5036788 | Msa0098990:intron | 30.0% |
!! | GTTGCACAAATTTGCTGATT+TGG | + | chr1_3:5032556-5032575 | None:intergenic | 35.0% |
TTTAATCAAACAGGGCCTAA+TGG | + | chr1_3:5032651-5032670 | None:intergenic | 35.0% | |
CCGTAGAGTTTATGAAAACA+AGG | - | chr1_3:5032787-5032806 | Msa0098990:CDS | 35.0% | |
AAACAAGGTGAAACAGTGTA+TGG | - | chr1_3:5032802-5032821 | Msa0098990:CDS | 35.0% | |
TTGTAGTGTGATTTCTTTCC+GGG | - | chr1_3:5033021-5033040 | Msa0098990:CDS | 35.0% | |
!! | TGGGTTGATTAGCAAAGAAA+TGG | - | chr1_3:5033066-5033085 | Msa0098990:CDS | 35.0% |
CTATGAAATGAACCATGTGT+TGG | - | chr1_3:5033298-5033317 | Msa0098990:intron | 35.0% | |
ATTGAATGATGTCCAACACA+TGG | + | chr1_3:5033313-5033332 | None:intergenic | 35.0% | |
! | TTGTTTCCCTTTTGCGTATT+AGG | + | chr1_3:5033426-5033445 | None:intergenic | 35.0% |
GAGACAACACACAAAAAGAT+AGG | - | chr1_3:5033490-5033509 | Msa0098990:intron | 35.0% | |
AGGAAATAGAATTCCTCGTT+AGG | - | chr1_3:5033510-5033529 | Msa0098990:intron | 35.0% | |
AAATAGAATTCCTCGTTAGG+TGG | - | chr1_3:5033513-5033532 | Msa0098990:intron | 35.0% | |
TCGGTATCTTCAAAAAACAC+AGG | + | chr1_3:5033546-5033565 | None:intergenic | 35.0% | |
! | ACTTTGAAAACACCTACTAG+AGG | - | chr1_3:5033644-5033663 | Msa0098990:intron | 35.0% |
!! | GCATGGAAGCATTCTATTAT+GGG | + | chr1_3:5033672-5033691 | None:intergenic | 35.0% |
!! | AGCATGGAAGCATTCTATTA+TGG | + | chr1_3:5033673-5033692 | None:intergenic | 35.0% |
GTCTTTATCAATGAAGCTCT+TGG | + | chr1_3:5033753-5033772 | None:intergenic | 35.0% | |
GGAAGTGAACAAACAAACTA+TGG | + | chr1_3:5033808-5033827 | None:intergenic | 35.0% | |
ACTCACCATTTATACAACTG+AGG | + | chr1_3:5034011-5034030 | None:intergenic | 35.0% | |
AGTTGTATAAATGGTGAGTG+AGG | - | chr1_3:5034012-5034031 | Msa0098990:intron | 35.0% | |
AGAAGGAGAAAAATCTCTCT+CGG | + | chr1_3:5034092-5034111 | None:intergenic | 35.0% | |
TGATGAAGGAAAACTGTAGA+AGG | + | chr1_3:5034153-5034172 | None:intergenic | 35.0% | |
!! | GGTGGAAAAGTATTAGATGT+AGG | + | chr1_3:5034318-5034337 | None:intergenic | 35.0% |
!!! | ATTTTGGCTCTAATGAACCT+AGG | - | chr1_3:5034357-5034376 | Msa0098990:intron | 35.0% |
! | GATAAGGAGGTTGTTTCAAT+GGG | - | chr1_3:5034618-5034637 | Msa0098990:intron | 35.0% |
! | GTTTGTAATGGAGTAGTGTT+AGG | - | chr1_3:5034658-5034677 | Msa0098990:intron | 35.0% |
! | TTGTAATGGAGTAGTGTTAG+GGG | - | chr1_3:5034660-5034679 | Msa0098990:intron | 35.0% |
AAGAAATTTAGGAAGTGGAG+TGG | - | chr1_3:5034784-5034803 | Msa0098990:intron | 35.0% | |
AGAAATTTAGGAAGTGGAGT+GGG | - | chr1_3:5034785-5034804 | Msa0098990:intron | 35.0% | |
! | GACATTTTCAAAGGGATCAA+AGG | + | chr1_3:5034828-5034847 | None:intergenic | 35.0% |
TGTGCTTCAATATTGTGTGT+TGG | - | chr1_3:5034876-5034895 | Msa0098990:intron | 35.0% | |
GCAATGATTTCCAATCAAGA+AGG | - | chr1_3:5035037-5035056 | Msa0098990:intron | 35.0% | |
!! | GTTTACCTGCATTATTTTGC+AGG | - | chr1_3:5035075-5035094 | Msa0098990:intron | 35.0% |
TATGACCTGCAAAATAATGC+AGG | + | chr1_3:5035083-5035102 | None:intergenic | 35.0% | |
GGTCATATGATATGTTGCAT+TGG | - | chr1_3:5035096-5035115 | Msa0098990:intron | 35.0% | |
GGGTTATTCAATTAGATCTG+TGG | - | chr1_3:5035118-5035137 | Msa0098990:intron | 35.0% | |
! | TTTTCCTGTGGTATTTTGTG+TGG | - | chr1_3:5035180-5035199 | Msa0098990:intron | 35.0% |
! | TTTCCTGTGGTATTTTGTGT+GGG | - | chr1_3:5035181-5035200 | Msa0098990:intron | 35.0% |
! | GTTTTCTATCATGCTTTCAC+TGG | - | chr1_3:5035369-5035388 | Msa0098990:intron | 35.0% |
! | GCCTTCATGTTTAAGCATTT+TGG | - | chr1_3:5035694-5035713 | Msa0098990:intron | 35.0% |
!!! | TGCATTGGTTTTTGCAGATA+TGG | - | chr1_3:5035735-5035754 | Msa0098990:intron | 35.0% |
CAGTATCTTATGTTTCACAG+TGG | + | chr1_3:5035782-5035801 | None:intergenic | 35.0% | |
CACTGTGAAACATAAGATAC+TGG | - | chr1_3:5035780-5035799 | Msa0098990:intron | 35.0% | |
CTTCTGGACATTGATATTTG+TGG | - | chr1_3:5035889-5035908 | Msa0098990:intron | 35.0% | |
AGATTAGACTCAACATAGAC+AGG | + | chr1_3:5035982-5036001 | None:intergenic | 35.0% | |
GTCTATGTTGAGTCTAATCT+CGG | - | chr1_3:5035982-5036001 | Msa0098990:intron | 35.0% | |
TCTATGTTGAGTCTAATCTC+GGG | - | chr1_3:5035983-5036002 | Msa0098990:intron | 35.0% | |
!! | TCAATAAGAGAGACTTGTTG+AGG | + | chr1_3:5036228-5036247 | None:intergenic | 35.0% |
AAAGTTGGAGTGAAAGTTCT+TGG | - | chr1_3:5036276-5036295 | Msa0098990:intron | 35.0% | |
AAGTTGGAGTGAAAGTTCTT+GGG | - | chr1_3:5036277-5036296 | Msa0098990:intron | 35.0% | |
TGGTGAGATGAAAGATGTTA+CGG | - | chr1_3:5036368-5036387 | Msa0098990:intron | 35.0% | |
GCGATTAAATTCAGCATTTC+AGG | + | chr1_3:5036426-5036445 | None:intergenic | 35.0% | |
ACTATCAAATACTTCACTGC+AGG | + | chr1_3:5036448-5036467 | None:intergenic | 35.0% | |
AAAGGAACCTTACCAAGAAA+GGG | + | chr1_3:5036513-5036532 | None:intergenic | 35.0% | |
TAAAGGAACCTTACCAAGAA+AGG | + | chr1_3:5036514-5036533 | None:intergenic | 35.0% | |
ACAATCTTTATCTGCAAAGC+AGG | + | chr1_3:5036574-5036593 | None:intergenic | 35.0% | |
ATAAGCTGATGGAAACTAGT+GGG | - | chr1_3:5036628-5036647 | Msa0098990:intron | 35.0% | |
CTACAATGTCACAAACAAAC+TGG | + | chr1_3:5036881-5036900 | None:intergenic | 35.0% | |
TATCAGAAACAAACACCTGC+CGG | - | chr1_3:5032031-5032050 | Msa0098990:three_prime_UTR | 40.0% | |
TATATCTCCGTTGTTCTCCA+TGG | + | chr1_3:5032352-5032371 | None:intergenic | 40.0% | |
GGAAAATCTGATGCATGTGA+AGG | - | chr1_3:5032526-5032545 | Msa0098990:CDS | 40.0% | |
ATTTGTGCAACTGCTCCTAA+AGG | - | chr1_3:5032565-5032584 | Msa0098990:CDS | 40.0% | |
! | TACGGGATAACTTGCGAAAA+CGG | + | chr1_3:5032772-5032791 | None:intergenic | 40.0% |
! | GTGACTTGTGAGACTGATTA+TGG | + | chr1_3:5032854-5032873 | None:intergenic | 40.0% |
TATCTAGTACATGAGCACGA+AGG | + | chr1_3:5033001-5033020 | None:intergenic | 40.0% | |
! | AGCAATGATAATGATGAGCC+CGG | + | chr1_3:5033042-5033061 | None:intergenic | 40.0% |
ATTCCTTGGGCATTTGATAG+TGG | - | chr1_3:5033219-5033238 | Msa0098990:CDS | 40.0% | |
! | TTCCTTGGGCATTTGATAGT+GGG | - | chr1_3:5033220-5033239 | Msa0098990:CDS | 40.0% |
! | GTGGGTATAATTTTGTGCAG+AGG | - | chr1_3:5033238-5033257 | Msa0098990:CDS | 40.0% |
CATTAGGCAAGTGTGGAAAT+CGG | + | chr1_3:5033390-5033409 | None:intergenic | 40.0% | |
TTGCCTAATGGTGAAGTTAG+CGG | - | chr1_3:5033400-5033419 | Msa0098990:intron | 40.0% | |
CATGAACAACACACTAGCTA+TGG | + | chr1_3:5033610-5033629 | None:intergenic | 40.0% | |
! | TAGCTAGTGTGTTGTTCATG+TGG | - | chr1_3:5033610-5033629 | Msa0098990:intron | 40.0% |
! | AGCTAGTGTGTTGTTCATGT+GGG | - | chr1_3:5033611-5033630 | Msa0098990:intron | 40.0% |
AATAGAATGCTTCCATGCTC+AGG | - | chr1_3:5033674-5033693 | Msa0098990:intron | 40.0% | |
TTCCATGCTCAGGAAAAAGA+TGG | - | chr1_3:5033684-5033703 | Msa0098990:intron | 40.0% | |
! | AACCATCTTTTTCCTGAGCA+TGG | + | chr1_3:5033689-5033708 | None:intergenic | 40.0% |
AATGAAGCTCTTGGATACAG+AGG | + | chr1_3:5033744-5033763 | None:intergenic | 40.0% | |
CGAGGGCTGATAAGTAAAAA+GGG | - | chr1_3:5033908-5033927 | Msa0098990:intron | 40.0% | |
GAGGGCTGATAAGTAAAAAG+GGG | - | chr1_3:5033909-5033928 | Msa0098990:intron | 40.0% | |
TGAGGCTAGTGAAGATTGAT+GGG | - | chr1_3:5034030-5034049 | Msa0098990:intron | 40.0% | |
TAAGATGCTGAATCACACCT+AGG | + | chr1_3:5034377-5034396 | None:intergenic | 40.0% | |
ATTGCACAATCCAGGGAATT+GGG | - | chr1_3:5034415-5034434 | Msa0098990:intron | 40.0% | |
ATATAAGCCTGTCGCTGAAA+TGG | - | chr1_3:5034536-5034555 | Msa0098990:intron | 40.0% | |
! | GGATAAGGAGGTTGTTTCAA+TGG | - | chr1_3:5034617-5034636 | Msa0098990:intron | 40.0% |
! | GAGGTTGTTTCAATGGGAAA+AGG | - | chr1_3:5034624-5034643 | Msa0098990:intron | 40.0% |
GTTTCAATGGGAAAAGGAGT+TGG | - | chr1_3:5034630-5034649 | Msa0098990:intron | 40.0% | |
AGAGTTAGATAGGTGGAAGT+GGG | - | chr1_3:5034699-5034718 | Msa0098990:intron | 40.0% | |
! | ATCCCTTTGAAAATGTCGGT+TGG | - | chr1_3:5034831-5034850 | Msa0098990:intron | 40.0% |
! | CTCCAACCGACATTTTCAAA+GGG | + | chr1_3:5034836-5034855 | None:intergenic | 40.0% |
GCTTCAATATTGTGTGTTGG+AGG | - | chr1_3:5034879-5034898 | Msa0098990:intron | 40.0% | |
!! | ATTAGATCTGTGGGTTAGCT+AGG | - | chr1_3:5035128-5035147 | Msa0098990:intron | 40.0% |
!! | TATGACACTTGGGCTGTTTT+TGG | - | chr1_3:5035621-5035640 | Msa0098990:intron | 40.0% |
!!! | ACTTGGGCTGTTTTTGGATA+GGG | - | chr1_3:5035627-5035646 | Msa0098990:intron | 40.0% |
TTTCACAGTGGCCATTCTTT+CGG | + | chr1_3:5035770-5035789 | None:intergenic | 40.0% | |
!! | CATAAGATACTGGTCTTGTC+AGG | - | chr1_3:5035790-5035809 | Msa0098990:intron | 40.0% |
!! | ATACTGGTCTTGTCAGGAAA+GGG | - | chr1_3:5035796-5035815 | Msa0098990:intron | 40.0% |
!!! | GGATTTTCAAGTTGGTCTTC+TGG | - | chr1_3:5035873-5035892 | Msa0098990:intron | 40.0% |
CTATGTTGAGTCTAATCTCG+GGG | - | chr1_3:5035984-5036003 | Msa0098990:intron | 40.0% | |
ATCCAGACGAAGCTGTTATA+TGG | - | chr1_3:5036034-5036053 | Msa0098990:intron | 40.0% | |
!! | TTGATAAGCCCATTTTTGCG+TGG | + | chr1_3:5036066-5036085 | None:intergenic | 40.0% |
CTAGATGCTGCTAATGTAGA+CGG | - | chr1_3:5036183-5036202 | Msa0098990:intron | 40.0% | |
AGTTGGAGTGAAAGTTCTTG+GGG | - | chr1_3:5036278-5036297 | Msa0098990:intron | 40.0% | |
AGATGAAAGATGTTACGGAG+TGG | - | chr1_3:5036373-5036392 | Msa0098990:intron | 40.0% | |
AGATGTTACGGAGTGGATAT+CGG | - | chr1_3:5036380-5036399 | Msa0098990:intron | 40.0% | |
! | GAAGTATTTGATAGTAGCGG+TGG | - | chr1_3:5036453-5036472 | Msa0098990:intron | 40.0% |
TTGCAAAGCTGTGGATCTAA+AGG | + | chr1_3:5036531-5036550 | None:intergenic | 40.0% | |
TTTAGATCCACAGCTTTGCA+AGG | - | chr1_3:5036530-5036549 | Msa0098990:intron | 40.0% | |
GATAAGCTGATGGAAACTAG+TGG | - | chr1_3:5036627-5036646 | Msa0098990:intron | 40.0% | |
GAAGGGAAAAGGGAAAAACC+TGG | + | chr1_3:5032075-5032094 | None:intergenic | 45.0% | |
AGAGAAGAGAAGAGCTTCCA+TGG | - | chr1_3:5032332-5032351 | Msa0098990:exon | 45.0% | |
AGAGCTTCCATGGAGAACAA+CGG | - | chr1_3:5032342-5032361 | Msa0098990:exon | 45.0% | |
TTTCCAGCAGAATCAGACTG+AGG | + | chr1_3:5032511-5032530 | None:intergenic | 45.0% | |
!! | AAGGTGAAGAGTACCAACCA+GGG | + | chr1_3:5032597-5032616 | None:intergenic | 45.0% |
!! | AAAGGTGAAGAGTACCAACC+AGG | + | chr1_3:5032598-5032617 | None:intergenic | 45.0% |
AAACAGGGCCTAATGGTCAT+TGG | + | chr1_3:5032644-5032663 | None:intergenic | 45.0% | |
TACCCACTATCAAATGCCCA+AGG | + | chr1_3:5033225-5033244 | None:intergenic | 45.0% | |
CGATTTCCACACTTGCCTAA+TGG | - | chr1_3:5033388-5033407 | Msa0098990:intron | 45.0% | |
ACTTCACCATTAGGCAAGTG+TGG | + | chr1_3:5033397-5033416 | None:intergenic | 45.0% | |
TTAGCGGCCTAATACGCAAA+AGG | - | chr1_3:5033416-5033435 | Msa0098990:intron | 45.0% | |
TAGCGGCCTAATACGCAAAA+GGG | - | chr1_3:5033417-5033436 | Msa0098990:intron | 45.0% | |
! | TAGTGTGTTGTTCATGTGGG+AGG | - | chr1_3:5033614-5033633 | Msa0098990:intron | 45.0% |
! | AGTGTGTTGTTCATGTGGGA+GGG | - | chr1_3:5033615-5033634 | Msa0098990:intron | 45.0% |
CTATTATGGGAGCCTCTAGT+AGG | + | chr1_3:5033659-5033678 | None:intergenic | 45.0% | |
CAACAAAAGCTCTTCGATGC+AGG | + | chr1_3:5033719-5033738 | None:intergenic | 45.0% | |
ACTTCCCTGTGTTCCTCATT+GGG | - | chr1_3:5033822-5033841 | Msa0098990:intron | 45.0% | |
GCTCTCGAAACAGAGTTTGA+TGG | - | chr1_3:5033876-5033895 | Msa0098990:intron | 45.0% | |
TTTGATGGAGATCAGAGCGA+GGG | - | chr1_3:5033891-5033910 | Msa0098990:intron | 45.0% | |
GCGAGGGCTGATAAGTAAAA+AGG | - | chr1_3:5033907-5033926 | Msa0098990:intron | 45.0% | |
GTGAGGCTAGTGAAGATTGA+TGG | - | chr1_3:5034029-5034048 | Msa0098990:intron | 45.0% | |
GAGGCTAGTGAAGATTGATG+GGG | - | chr1_3:5034031-5034050 | Msa0098990:intron | 45.0% | |
TGATGGGGACTGAGGAATAT+TGG | - | chr1_3:5034046-5034065 | Msa0098990:intron | 45.0% | |
TGGAGTGAACCATCACAGTT+AGG | - | chr1_3:5034066-5034085 | Msa0098990:intron | 45.0% | |
! | GAGATTTTTCTCCTTCTCCG+AGG | - | chr1_3:5034095-5034114 | Msa0098990:intron | 45.0% |
CATTGCACAATCCAGGGAAT+TGG | - | chr1_3:5034414-5034433 | Msa0098990:intron | 45.0% | |
CTGTCGCTGAAATGGTTGTA+GGG | - | chr1_3:5034544-5034563 | Msa0098990:intron | 45.0% | |
TGTCGCTGAAATGGTTGTAG+GGG | - | chr1_3:5034545-5034564 | Msa0098990:intron | 45.0% | |
TCAATGGGAAAAGGAGTTGG+TGG | - | chr1_3:5034633-5034652 | Msa0098990:intron | 45.0% | |
!! | GAGTTGGTGGTGGTTTGTAA+TGG | - | chr1_3:5034646-5034665 | Msa0098990:intron | 45.0% |
!! | AGTGTTAGGGGTTGATTCGA+TGG | - | chr1_3:5034672-5034691 | Msa0098990:intron | 45.0% |
CGATGGAGAGAGAGTTAGAT+AGG | - | chr1_3:5034689-5034708 | Msa0098990:intron | 45.0% | |
TGGAGAGAGAGTTAGATAGG+TGG | - | chr1_3:5034692-5034711 | Msa0098990:intron | 45.0% | |
GAGAGTTAGATAGGTGGAAG+TGG | - | chr1_3:5034698-5034717 | Msa0098990:intron | 45.0% | |
TTAGATAGGTGGAAGTGGGA+AGG | - | chr1_3:5034703-5034722 | Msa0098990:intron | 45.0% | |
! | CCTCCAACCGACATTTTCAA+AGG | + | chr1_3:5034837-5034856 | None:intergenic | 45.0% |
! | CCTTTGAAAATGTCGGTTGG+AGG | - | chr1_3:5034834-5034853 | Msa0098990:intron | 45.0% |
ATATTGTGTGTTGGAGGCTG+TGG | - | chr1_3:5034885-5034904 | Msa0098990:intron | 45.0% | |
TGTGGTAAACTCGAAGAAGG+AGG | - | chr1_3:5034903-5034922 | Msa0098990:intron | 45.0% | |
! | GGTTAGCTAGGAAGTTGTGT+TGG | - | chr1_3:5035140-5035159 | Msa0098990:intron | 45.0% |
TCTCCCACACAAAATACCAC+AGG | + | chr1_3:5035187-5035206 | None:intergenic | 45.0% | |
ATGCTTTCACTGGACATTGC+AGG | - | chr1_3:5035379-5035398 | Msa0098990:intron | 45.0% | |
!!! | CACTTGGGCTGTTTTTGGAT+AGG | - | chr1_3:5035626-5035645 | Msa0098990:intron | 45.0% |
!! | GATACTGGTCTTGTCAGGAA+AGG | - | chr1_3:5035795-5035814 | Msa0098990:intron | 45.0% |
!!! | GCTGCAAGGGATTTTCAAGT+TGG | - | chr1_3:5035865-5035884 | Msa0098990:intron | 45.0% |
CTTCTAGGCCAAGCATCTTT+GGG | + | chr1_3:5035924-5035943 | None:intergenic | 45.0% | |
GGTGTATCTCTTGACCTTCT+AGG | + | chr1_3:5035939-5035958 | None:intergenic | 45.0% | |
AATCTCGGGGTCATGTCAAT+TGG | - | chr1_3:5035997-5036016 | Msa0098990:intron | 45.0% | |
ATCTCGGGGTCATGTCAATT+GGG | - | chr1_3:5035998-5036017 | Msa0098990:intron | 45.0% | |
ATAACAGCTTCGTCTGGATG+AGG | + | chr1_3:5036033-5036052 | None:intergenic | 45.0% | |
CTCCATATAACAGCTTCGTC+TGG | + | chr1_3:5036039-5036058 | None:intergenic | 45.0% | |
GACGAAGCTGTTATATGGAG+AGG | - | chr1_3:5036039-5036058 | Msa0098990:intron | 45.0% | |
! | ATGTGTTCATCTGAGGTTCC+AGG | + | chr1_3:5036147-5036166 | None:intergenic | 45.0% |
CGTCTACATTAGCAGCATCT+AGG | + | chr1_3:5036185-5036204 | None:intergenic | 45.0% | |
!! | AAGAGAGACTTGTTGAGGAG+TGG | + | chr1_3:5036223-5036242 | None:intergenic | 45.0% |
GGGGTTGTAGAGAATATGAG+TGG | - | chr1_3:5036297-5036316 | Msa0098990:intron | 45.0% | |
! | CTTGAGATTTGAGATGGGCT+GGG | + | chr1_3:5036328-5036347 | None:intergenic | 45.0% |
! | ACTTGAGATTTGAGATGGGC+TGG | + | chr1_3:5036329-5036348 | None:intergenic | 45.0% |
! | GTATTTGATAGTAGCGGTGG+TGG | - | chr1_3:5036456-5036475 | Msa0098990:intron | 45.0% |
AAAGCAGGATCTGCCTTCTT+CGG | + | chr1_3:5036559-5036578 | None:intergenic | 45.0% | |
!! | AACTAGTGGGCTGTCAATGA+CGG | - | chr1_3:5036641-5036660 | Msa0098990:CDS | 45.0% |
! | CTGTCAATGACGGAAAGCAA+TGG | - | chr1_3:5036651-5036670 | Msa0098990:CDS | 45.0% |
!! | AAAGAAAAAAATAATAAAAA+AGG | + | chr1_3:5032300-5032319 | None:intergenic | 5.0% |
GGAAAAGGGAAAAACCTGGC+GGG | + | chr1_3:5032071-5032090 | None:intergenic | 50.0% | |
GGGAAAAGGGAAAAACCTGG+CGG | + | chr1_3:5032072-5032091 | None:intergenic | 50.0% | |
GAACAACGGAGATATACCCG+AGG | - | chr1_3:5032356-5032375 | Msa0098990:CDS | 50.0% | |
ATACGTTCGTTGGCATCCTC+GGG | + | chr1_3:5032375-5032394 | None:intergenic | 50.0% | |
CATACGTTCGTTGGCATCCT+CGG | + | chr1_3:5032376-5032395 | None:intergenic | 50.0% | |
CTGGCATTTACAGATTGCCC+AGG | - | chr1_3:5032484-5032503 | Msa0098990:CDS | 50.0% | |
CAGAATCAGACTGAGGACCT+GGG | + | chr1_3:5032504-5032523 | None:intergenic | 50.0% | |
AGGCCGCTAACTTCACCATT+AGG | + | chr1_3:5033406-5033425 | None:intergenic | 50.0% | |
AGGATGTCTACCACCTAACG+AGG | + | chr1_3:5033526-5033545 | None:intergenic | 50.0% | |
TTGTTCATGTGGGAGGGTGA+TGG | - | chr1_3:5033621-5033640 | Msa0098990:intron | 50.0% | |
CACTTCCCTGTGTTCCTCAT+TGG | - | chr1_3:5033821-5033840 | Msa0098990:intron | 50.0% | |
CCTTCCCAATGAGGAACACA+GGG | + | chr1_3:5033829-5033848 | None:intergenic | 50.0% | |
CCTGTGTTCCTCATTGGGAA+GGG | - | chr1_3:5033827-5033846 | Msa0098990:intron | 50.0% | |
GTCAACATCCCTTCCCAATG+AGG | + | chr1_3:5033838-5033857 | None:intergenic | 50.0% | |
TGACCTTGAGCATCTGCTAC+AGG | - | chr1_3:5033854-5033873 | Msa0098990:intron | 50.0% | |
GTTTGATGGAGATCAGAGCG+AGG | - | chr1_3:5033890-5033909 | Msa0098990:intron | 50.0% | |
AGTGTGGTAGGCTGCTTAGT+TGG | - | chr1_3:5033972-5033991 | Msa0098990:intron | 50.0% | |
GTGAAGATTGATGGGGACTG+AGG | - | chr1_3:5034038-5034057 | Msa0098990:intron | 50.0% | |
!! | AGCTTGGCTCTGGTGTAGAT+TGG | - | chr1_3:5034118-5034137 | Msa0098990:intron | 50.0% |
!! | GCTTGGCTCTGGTGTAGATT+GGG | - | chr1_3:5034119-5034138 | Msa0098990:intron | 50.0% |
CTGTGTATCTCCCAATTCCC+TGG | + | chr1_3:5034428-5034447 | None:intergenic | 50.0% | |
CCTACAACCATTTCAGCGAC+AGG | + | chr1_3:5034546-5034565 | None:intergenic | 50.0% | |
CCTGTCGCTGAAATGGTTGT+AGG | - | chr1_3:5034543-5034562 | Msa0098990:intron | 50.0% | |
GTCGCTGAAATGGTTGTAGG+GGG | - | chr1_3:5034546-5034565 | Msa0098990:intron | 50.0% | |
TCGCTGAAATGGTTGTAGGG+GGG | - | chr1_3:5034547-5034566 | Msa0098990:intron | 50.0% | |
TGAAATGGTTGTAGGGGGGT+GGG | - | chr1_3:5034551-5034570 | Msa0098990:intron | 50.0% | |
!! | ATGGGAAAAGGAGTTGGTGG+TGG | - | chr1_3:5034636-5034655 | Msa0098990:intron | 50.0% |
ATAGGTGGAAGTGGGAAGGA+GGG | - | chr1_3:5034707-5034726 | Msa0098990:intron | 50.0% | |
!! | TGGAGTGGGCTAAAGAGGTT+TGG | - | chr1_3:5034799-5034818 | Msa0098990:intron | 50.0% |
! | ATGTCGGTTGGAGGCAAAAG+AGG | - | chr1_3:5034843-5034862 | Msa0098990:intron | 50.0% |
! | TGTCGGTTGGAGGCAAAAGA+GGG | - | chr1_3:5034844-5034863 | Msa0098990:intron | 50.0% |
GGCTGTGGTAAACTCGAAGA+AGG | - | chr1_3:5034900-5034919 | Msa0098990:intron | 50.0% | |
TAACTGAAAAACACGGCGCC+AGG | + | chr1_3:5035238-5035257 | None:intergenic | 50.0% | |
GGTTGCCATTGCCGAAAGAA+TGG | - | chr1_3:5035756-5035775 | Msa0098990:intron | 50.0% | |
AGTGGCCATTCTTTCGGCAA+TGG | + | chr1_3:5035764-5035783 | None:intergenic | 50.0% | |
! | TTGTCAGGAAAGGGAGGTGT+TGG | - | chr1_3:5035805-5035824 | Msa0098990:intron | 50.0% |
AGCTAACGCAAATGCCAGCT+GGG | + | chr1_3:5035848-5035867 | None:intergenic | 50.0% | |
TGGCATTTGCGTTAGCTGCA+AGG | - | chr1_3:5035851-5035870 | Msa0098990:intron | 50.0% | |
GGCATTTGCGTTAGCTGCAA+GGG | - | chr1_3:5035852-5035871 | Msa0098990:intron | 50.0% | |
!! | CCAAGCATCTTTGGGATGCT+TGG | + | chr1_3:5035916-5035935 | None:intergenic | 50.0% |
CCAAGCATCCCAAAGATGCT+TGG | - | chr1_3:5035913-5035932 | Msa0098990:intron | 50.0% | |
CCTTCTAGGCCAAGCATCTT+TGG | + | chr1_3:5035925-5035944 | None:intergenic | 50.0% | |
CCAAAGATGCTTGGCCTAGA+AGG | - | chr1_3:5035922-5035941 | Msa0098990:intron | 50.0% | |
GAGATACACCAGAGCAACCT+TGG | - | chr1_3:5035949-5035968 | Msa0098990:intron | 50.0% | |
TACACCAGAGCAACCTTGGT+TGG | - | chr1_3:5035953-5035972 | Msa0098990:intron | 50.0% | |
CATAGACAGGAGACCAACCA+AGG | + | chr1_3:5035969-5035988 | None:intergenic | 50.0% | |
TGGAGAGGTCCACGCAAAAA+TGG | - | chr1_3:5036054-5036073 | Msa0098990:intron | 50.0% | |
GGAGAGGTCCACGCAAAAAT+GGG | - | chr1_3:5036055-5036074 | Msa0098990:intron | 50.0% | |
CTAATTGTTGATGCTCCGCC+TGG | - | chr1_3:5036126-5036145 | Msa0098990:intron | 50.0% | |
! | TGTTCATCTGAGGTTCCAGG+CGG | + | chr1_3:5036144-5036163 | None:intergenic | 50.0% |
CAAGGGAGGGGAAGGGAAAA+GGG | + | chr1_3:5032085-5032104 | None:intergenic | 55.0% | |
ACAAGGGAGGGGAAGGGAAA+AGG | + | chr1_3:5032086-5032105 | None:intergenic | 55.0% | |
TCCCTTCCCCTCCCTTGTTA+CGG | - | chr1_3:5032088-5032107 | Msa0098990:three_prime_UTR | 55.0% | |
GCAGAATCAGACTGAGGACC+TGG | + | chr1_3:5032505-5032524 | None:intergenic | 55.0% | |
GGTCCTCAGTCTGATTCTGC+TGG | - | chr1_3:5032505-5032524 | Msa0098990:CDS | 55.0% | |
CAACCAGGGTCAGGTCCTTT+AGG | + | chr1_3:5032583-5032602 | None:intergenic | 55.0% | |
CTAAAGGACCTGACCCTGGT+TGG | - | chr1_3:5032581-5032600 | Msa0098990:CDS | 55.0% | |
!! | GAAGAGTACCAACCAGGGTC+AGG | + | chr1_3:5032592-5032611 | None:intergenic | 55.0% |
CCCTGTGTTCCTCATTGGGA+AGG | - | chr1_3:5033826-5033845 | Msa0098990:intron | 55.0% | |
CCCTTCCCAATGAGGAACAC+AGG | + | chr1_3:5033830-5033849 | None:intergenic | 55.0% | |
GAGCCTGTAGCAGATGCTCA+AGG | + | chr1_3:5033860-5033879 | None:intergenic | 55.0% | |
TGGTAGGCTGCTTAGTTGGC+AGG | - | chr1_3:5033976-5033995 | Msa0098990:intron | 55.0% | |
CTCTCTCGGCCTAACTGTGA+TGG | + | chr1_3:5034078-5034097 | None:intergenic | 55.0% | |
TTCTCCTTCTCCGAGGAGCT+TGG | - | chr1_3:5034102-5034121 | Msa0098990:intron | 55.0% | |
TACACCAGAGCCAAGCTCCT+CGG | + | chr1_3:5034115-5034134 | None:intergenic | 55.0% | |
CTGAAATGGTTGTAGGGGGG+TGG | - | chr1_3:5034550-5034569 | Msa0098990:intron | 55.0% | |
GAAATGGTTGTAGGGGGGTG+GGG | - | chr1_3:5034552-5034571 | Msa0098990:intron | 55.0% | |
AAATGGTTGTAGGGGGGTGG+GGG | - | chr1_3:5034553-5034572 | Msa0098990:intron | 55.0% | |
TGGGGAGGGGGAATTGGATA+AGG | - | chr1_3:5034602-5034621 | Msa0098990:intron | 55.0% | |
GGAGGGGGAATTGGATAAGG+AGG | - | chr1_3:5034605-5034624 | Msa0098990:intron | 55.0% | |
GATAGGTGGAAGTGGGAAGG+AGG | - | chr1_3:5034706-5034725 | Msa0098990:intron | 55.0% | |
!! | GGAAGTGGAGTGGGCTAAAG+AGG | - | chr1_3:5034794-5034813 | Msa0098990:intron | 55.0% |
GTCGGTTGGAGGCAAAAGAG+GGG | - | chr1_3:5034845-5034864 | Msa0098990:intron | 55.0% | |
!! | CTGGTCTTGTCAGGAAAGGG+AGG | - | chr1_3:5035799-5035818 | Msa0098990:intron | 55.0% |
! | GAGCACATTTTCTGCCCAGC+TGG | - | chr1_3:5035831-5035850 | Msa0098990:intron | 55.0% |
CAGCTAACGCAAATGCCAGC+TGG | + | chr1_3:5035849-5035868 | None:intergenic | 55.0% | |
GAGACCAACCAAGGTTGCTC+TGG | + | chr1_3:5035960-5035979 | None:intergenic | 55.0% | |
!! | GATTTGAGATGGGCTGGGAC+AGG | + | chr1_3:5036323-5036342 | None:intergenic | 55.0% |
! | GAGATGGCGGTACCCTTTCT+TGG | - | chr1_3:5036498-5036517 | Msa0098990:CDS | 55.0% |
GGCGGTACCCTTTCTTGGTA+AGG | - | chr1_3:5036503-5036522 | Msa0098990:CDS | 55.0% | |
CTTTGCAAGGCAGCCGAAGA+AGG | - | chr1_3:5036543-5036562 | Msa0098990:intron | 55.0% | |
GCCGTAACAAGGGAGGGGAA+GGG | + | chr1_3:5032092-5032111 | None:intergenic | 60.0% | |
CTTCCCCTCCCTTGTTACGG+CGG | - | chr1_3:5032091-5032110 | Msa0098990:three_prime_UTR | 60.0% | |
AATCGCGGCCGCCGTAACAA+GGG | + | chr1_3:5032102-5032121 | None:intergenic | 60.0% | |
AAATCGCGGCCGCCGTAACA+AGG | + | chr1_3:5032103-5032122 | None:intergenic | 60.0% | |
GCTCCTAAAGGACCTGACCC+TGG | - | chr1_3:5032577-5032596 | Msa0098990:CDS | 60.0% | |
AGAGCCAAGCTCCTCGGAGA+AGG | + | chr1_3:5034109-5034128 | None:intergenic | 60.0% | |
TTCTCCGAGGAGCTTGGCTC+TGG | - | chr1_3:5034108-5034127 | Msa0098990:intron | 60.0% | |
AATGGTTGTAGGGGGGTGGG+GGG | - | chr1_3:5034554-5034573 | Msa0098990:intron | 60.0% | |
TCGGCTGCCTTGCAAAGCTG+TGG | + | chr1_3:5036540-5036559 | None:intergenic | 60.0% | |
GTGACGACGATGACTCCGGC+AGG | + | chr1_3:5032049-5032068 | None:intergenic | 65.0% | |
GCGGGTGACGACGATGACTC+CGG | + | chr1_3:5032053-5032072 | None:intergenic | 65.0% | |
AGTCATCGTCGTCACCCGCC+AGG | - | chr1_3:5032054-5032073 | Msa0098990:three_prime_UTR | 65.0% | |
CGCCGTAACAAGGGAGGGGA+AGG | + | chr1_3:5032093-5032112 | None:intergenic | 65.0% | |
GTTACGGCGGCCGCGATTTG+CGG | - | chr1_3:5032104-5032123 | Msa0098990:three_prime_UTR | 65.0% | |
ATGGTTGTAGGGGGGTGGGG+GGG | - | chr1_3:5034555-5034574 | Msa0098990:intron | 65.0% | |
CGGCCGCCGTAACAAGGGAG+GGG | + | chr1_3:5032097-5032116 | None:intergenic | 70.0% | |
GCGGCCGCCGTAACAAGGGA+GGG | + | chr1_3:5032098-5032117 | None:intergenic | 70.0% | |
AGGGCCGCCACCGCAAATCG+CGG | + | chr1_3:5032117-5032136 | None:intergenic | 70.0% | |
TGGTTGTAGGGGGGTGGGGG+GGG | - | chr1_3:5034556-5034575 | Msa0098990:intron | 70.0% | |
GGGGGATGGGGAGGGGGAAT+TGG | - | chr1_3:5034596-5034615 | Msa0098990:intron | 70.0% | |
CGCGGCCGCCGTAACAAGGG+AGG | + | chr1_3:5032099-5032118 | None:intergenic | 75.0% | |
ACGGCGGCCGCGATTTGCGG+TGG | - | chr1_3:5032107-5032126 | Msa0098990:three_prime_UTR | 75.0% | |
GCGGCCGCGATTTGCGGTGG+CGG | - | chr1_3:5032110-5032129 | Msa0098990:three_prime_UTR | 75.0% | |
GGTTGTAGGGGGGTGGGGGG+GGG | - | chr1_3:5034557-5034576 | Msa0098990:intron | 75.0% | |
GTTGTAGGGGGGTGGGGGGG+GGG | - | chr1_3:5034558-5034577 | Msa0098990:intron | 75.0% | |
TTGTAGGGGGGTGGGGGGGG+GGG | - | chr1_3:5034559-5034578 | Msa0098990:intron | 75.0% | |
! | TGTAGGGGGGTGGGGGGGGG+GGG | - | chr1_3:5034560-5034579 | Msa0098990:intron | 80.0% |
! | GTAGGGGGGTGGGGGGGGGG+GGG | - | chr1_3:5034561-5034580 | Msa0098990:intron | 85.0% |
! | TAGGGGGGTGGGGGGGGGGG+GGG | - | chr1_3:5034562-5034581 | Msa0098990:intron | 85.0% |
! | GGGGGGGGGGGGGATGGGGA+GGG | - | chr1_3:5034588-5034607 | Msa0098990:intron | 85.0% |
! | GGGGGGGGGGGGATGGGGAG+GGG | - | chr1_3:5034589-5034608 | Msa0098990:intron | 85.0% |
! | GGGGGGGGGGGATGGGGAGG+GGG | - | chr1_3:5034590-5034609 | Msa0098990:intron | 85.0% |
! | AGGGGGGTGGGGGGGGGGGG+GGG | - | chr1_3:5034563-5034582 | Msa0098990:intron | 90.0% |
! | GGGGGGGGGGGGGGGGGGAT+GGG | - | chr1_3:5034583-5034602 | Msa0098990:intron | 90.0% |
! | GGGGGGGGGGGGGGGGGATG+GGG | - | chr1_3:5034584-5034603 | Msa0098990:intron | 90.0% |
! | GGGGGGGGGGGGGGATGGGG+AGG | - | chr1_3:5034587-5034606 | Msa0098990:intron | 90.0% |
! | GGGGGGTGGGGGGGGGGGGG+GGG | - | chr1_3:5034564-5034583 | Msa0098990:intron | 95.0% |
! | GGGGGTGGGGGGGGGGGGGG+GGG | - | chr1_3:5034565-5034584 | Msa0098990:intron | 95.0% |
! | GGGGTGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034566-5034585 | Msa0098990:intron | 95.0% |
! | GGGTGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034567-5034586 | Msa0098990:intron | 95.0% |
! | GGTGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034568-5034587 | Msa0098990:intron | 95.0% |
! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034569-5034588 | Msa0098990:intron | 95.0% |
! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_3:5034570-5034589 | Msa0098990:intron | 95.0% |
! | GGGGGGGGGGGGGGGGGGGA+TGG | - | chr1_3:5034582-5034601 | Msa0098990:intron | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 5031990 | 5037034 | 5031990 | ID=Msa0098990;Name=Msa0098990 |
chr1_3 | mRNA | 5031990 | 5037034 | 5031990 | ID=Msa0098990-mRNA-1;Parent=Msa0098990;Name=Msa0098990-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.66|0.75|1|0.66|0.75|4|354|376 |
chr1_3 | exon | 5031990 | 5033272 | 5031990 | ID=Msa0098990-mRNA-1:exon:1785;Parent=Msa0098990-mRNA-1 |
chr1_3 | exon | 5036477 | 5036527 | 5036477 | ID=Msa0098990-mRNA-1:exon:1784;Parent=Msa0098990-mRNA-1 |
chr1_3 | exon | 5036634 | 5036698 | 5036634 | ID=Msa0098990-mRNA-1:exon:1783;Parent=Msa0098990-mRNA-1 |
chr1_3 | exon | 5036949 | 5037034 | 5036949 | ID=Msa0098990-mRNA-1:exon:1782;Parent=Msa0098990-mRNA-1 |
chr1_3 | CDS | 5036949 | 5037034 | 5036949 | ID=Msa0098990-mRNA-1:cds;Parent=Msa0098990-mRNA-1 |
chr1_3 | CDS | 5036634 | 5036698 | 5036634 | ID=Msa0098990-mRNA-1:cds;Parent=Msa0098990-mRNA-1 |
chr1_3 | CDS | 5036477 | 5036527 | 5036477 | ID=Msa0098990-mRNA-1:cds;Parent=Msa0098990-mRNA-1 |
chr1_3 | CDS | 5032344 | 5033272 | 5032344 | ID=Msa0098990-mRNA-1:cds;Parent=Msa0098990-mRNA-1 |
chr1_3 | three_prime_UTR | 5031990 | 5032343 | 5031990 | ID=Msa0098990-mRNA-1:three_prime_utr;Parent=Msa0098990-mRNA-1 |
Gene Sequence |
Protein sequence |