Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084980 | XP_003616287.1 | 33.800 | 429 | 257 | 3 | 1 | 403 | 1 | 428 | 2.96e-79 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084980 | G7K1P7 | 33.800 | 429 | 257 | 3 | 1 | 403 | 1 | 428 | 1.41e-79 | 265 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045030 | Msa1084980 | 0.827914 | 1.202422e-54 | -8.615850e-47 |
| Msa0045080 | Msa1084980 | 0.988151 | 6.593686e-173 | -8.615850e-47 |
| Msa0045090 | Msa1084980 | 0.860926 | 1.469146e-63 | -8.615850e-47 |
| Msa0045120 | Msa1084980 | 0.826009 | 3.430861e-54 | -8.615850e-47 |
| Msa0045140 | Msa1084980 | 0.831243 | 1.863977e-55 | -8.615850e-47 |
| Msa0045150 | Msa1084980 | 0.840592 | 7.926885e-58 | -8.615850e-47 |
| Msa0045190 | Msa1084980 | 0.844400 | 7.737612e-59 | -8.615850e-47 |
| Msa0045350 | Msa1084980 | 0.834129 | 3.581869e-56 | -8.615850e-47 |
| Msa0045370 | Msa1084980 | 0.829514 | 4.932608e-55 | -8.615850e-47 |
| Msa0045400 | Msa1084980 | 0.805946 | 1.044355e-49 | -8.615850e-47 |
| Msa0045440 | Msa1084980 | 0.817947 | 2.531785e-52 | -8.615850e-47 |
| Msa1084980 | Msa1085000 | 0.863693 | 2.074750e-64 | -8.615850e-47 |
| Msa1084980 | Msa1426790 | 0.815780 | 7.757008e-52 | -8.615850e-47 |
| Msa1084980 | Msa1426840 | 0.817892 | 2.605291e-52 | -8.615850e-47 |
| Msa0484480 | Msa1084980 | 0.807657 | 4.542454e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084980 | MtrunA17_Chr6g0469931 | 34.440 | 241 | 146 | 3 | 1 | 236 | 1 | 234 | 3.23e-40 | 152 |
| Msa1084980 | MtrunA17_Chr2g0304051 | 62.626 | 99 | 35 | 1 | 237 | 335 | 13 | 109 | 5.25e-35 | 125 |
| Msa1084980 | MtrunA17_Chr7g0259081 | 34.118 | 170 | 109 | 3 | 6 | 174 | 5 | 172 | 6.90e-23 | 95.1 |
| Msa1084980 | MtrunA17_Chr3g0093401 | 32.512 | 203 | 129 | 2 | 7 | 209 | 7 | 201 | 1.14e-22 | 96.3 |
| Msa1084980 | MtrunA17_Chr7g0234721 | 33.529 | 170 | 110 | 3 | 6 | 174 | 5 | 172 | 3.10e-20 | 90.1 |
| Msa1084980 | MtrunA17_Chr4g0010241 | 32.278 | 158 | 107 | 0 | 38 | 195 | 56 | 213 | 3.42e-18 | 83.2 |
| Msa1084980 | MtrunA17_Chr6g0469811 | 35.507 | 138 | 84 | 2 | 2 | 139 | 15 | 147 | 1.03e-17 | 80.1 |
| Msa1084980 | MtrunA17_Chr1g0206481 | 27.536 | 207 | 146 | 4 | 16 | 220 | 16 | 220 | 3.37e-16 | 79.0 |
| Msa1084980 | MtrunA17_Chr4g0077081 | 29.932 | 147 | 96 | 1 | 216 | 362 | 28 | 167 | 5.75e-16 | 75.5 |
| Msa1084980 | MtrunA17_Chr2g0279021 | 21.377 | 276 | 184 | 4 | 161 | 405 | 1 | 274 | 5.45e-13 | 70.1 |
| Msa1084980 | MtrunA17_Chr2g0309041 | 37.500 | 96 | 58 | 2 | 45 | 139 | 1 | 95 | 5.87e-12 | 62.0 |
| Msa1084980 | MtrunA17_Chr5g0423441 | 28.272 | 191 | 129 | 6 | 36 | 220 | 32 | 220 | 3.68e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084980 | AT1G52950.1 | 25.000 | 396 | 247 | 12 | 20 | 373 | 22 | 409 | 6.29e-16 | 80.5 |
| Msa1084980 | AT2G05642.1 | 30.065 | 153 | 68 | 2 | 19 | 171 | 19 | 132 | 2.61e-12 | 68.9 |
Find 121 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGAGTGAAAAGGGATTT+AGG | 0.171986 | 7_2:-85350475 | None:intergenic |
| CTCTCGCCAAAATCTCATTT+TGG | 0.195497 | 7_2:+85350571 | Msa1084980:five_prime_UTR |
| GCTAAAATCAAAATGTTTCT+TGG | 0.216618 | 7_2:+85352236 | Msa1084980:CDS |
| GCTGATGCTGCTTGAGCTTT+TGG | 0.225529 | 7_2:+85352019 | Msa1084980:CDS |
| ACTGAACCAAAATGAGATTT+TGG | 0.228436 | 7_2:-85350577 | None:intergenic |
| CCGTCCACCTTGAAATTAAA+TGG | 0.241894 | 7_2:-85353127 | None:intergenic |
| TCAGAGTGATTGTGACTTCT+TGG | 0.262787 | 7_2:+85351838 | Msa1084980:CDS |
| CCTCAATTTCAGTCATTGTT+TGG | 0.266991 | 7_2:+85353519 | Msa1084980:CDS |
| AGACAACACAACCTTCAATT+TGG | 0.267550 | 7_2:-85352174 | None:intergenic |
| TCGCCGTATTCTCTCATCTT+TGG | 0.280211 | 7_2:-85352903 | None:intergenic |
| TGAGAGTGAAAAGGGATTTA+GGG | 0.295282 | 7_2:-85350474 | None:intergenic |
| CTCAATTTCAGTCATTGTTT+GGG | 0.302397 | 7_2:+85353520 | Msa1084980:CDS |
| AGTGAATTGAAAATGGATTT+AGG | 0.305820 | 7_2:-85350516 | None:intergenic |
| ATTCCGTACAACTCGAAAAC+TGG | 0.325730 | 7_2:-85351681 | None:intergenic |
| GCAAAGTTTACTGTCTTTGA+TGG | 0.325831 | 7_2:+85353260 | Msa1084980:CDS |
| AAACTTCCCATCTTCAATAA+TGG | 0.328623 | 7_2:-85352976 | None:intergenic |
| TTTCGAGTTGTACGGAATTT+GGG | 0.337570 | 7_2:+85351686 | Msa1084980:CDS |
| TCAACTTTGATAGGCGATAA+TGG | 0.340722 | 7_2:+85353086 | Msa1084980:CDS |
| AGGAGTTAGTTCACCTGTTT+CGG | 0.341397 | 7_2:+85351624 | Msa1084980:CDS |
| TGTATAGGGATGTAGGATTC+AGG | 0.358257 | 7_2:+85351589 | Msa1084980:intron |
| ATAGAAGTGAGGTTGAAAAT+TGG | 0.377432 | 7_2:+85351385 | Msa1084980:CDS |
| TTGATCATTGATCTGTTCAA+TGG | 0.386511 | 7_2:+85353633 | Msa1084980:CDS |
| CTTGACTCCATTATTGAAGA+TGG | 0.387075 | 7_2:+85352969 | Msa1084980:CDS |
| GAGTGAGAGTGAATTGAAAA+TGG | 0.395661 | 7_2:-85350523 | None:intergenic |
| AAATTGAAGGTTGTGTTGTC+TGG | 0.395927 | 7_2:+85352176 | Msa1084980:CDS |
| ATGAATTCCATTTAATTTCA+AGG | 0.396715 | 7_2:+85353120 | Msa1084980:CDS |
| ATTAATTTGTATAGGGATGT+AGG | 0.397678 | 7_2:+85351582 | Msa1084980:intron |
| AGTTCAACTATCGTCTTCTT+CGG | 0.398079 | 7_2:-85352948 | None:intergenic |
| AAATTGGTATCGTACGTCTC+TGG | 0.399090 | 7_2:+85351401 | Msa1084980:CDS |
| GACGCCTCTATCGCCTCTAT+TGG | 0.405399 | 7_2:+85352879 | Msa1084980:CDS |
| GTTCAACTATCGTCTTCTTC+GGG | 0.412056 | 7_2:-85352947 | None:intergenic |
| GAATCGATTGAGAGTGAAAA+GGG | 0.419953 | 7_2:-85350482 | None:intergenic |
| CCCTCAACATTATATTCCAT+TGG | 0.421959 | 7_2:-85351984 | None:intergenic |
| TCTCATCTTTGGACCAATAG+AGG | 0.428156 | 7_2:-85352892 | None:intergenic |
| CGTTGCAGGTTAAGTGTTTG+TGG | 0.430658 | 7_2:+85352846 | Msa1084980:intron |
| AGGTTACATTTAATACGGTC+TGG | 0.432001 | 7_2:-85350548 | None:intergenic |
| TTGTTCGACGATGATCTTAG+TGG | 0.433335 | 7_2:+85353305 | Msa1084980:CDS |
| CGAATGCACTTCCAAATTGA+AGG | 0.434526 | 7_2:+85352163 | Msa1084980:CDS |
| AAGGATGCATCAACTTTGAT+AGG | 0.440539 | 7_2:+85353077 | Msa1084980:CDS |
| CCATTGTTGAGAAAGCTTTG+AGG | 0.447255 | 7_2:+85350632 | Msa1084980:five_prime_UTR |
| TGAACAGTCTCATCCGAAAC+AGG | 0.449471 | 7_2:-85351637 | None:intergenic |
| TGTTTGACTGGATTTATTGA+TGG | 0.463399 | 7_2:+85353011 | Msa1084980:CDS |
| GGTTGTGTTGTCTGGTTGCA+CGG | 0.465831 | 7_2:+85352184 | Msa1084980:CDS |
| AACCTCACTTCTATGCTAAG+AGG | 0.466542 | 7_2:-85351376 | None:intergenic |
| ACAACAATCCAAGGTTGGAT+TGG | 0.468256 | 7_2:-85353580 | None:intergenic |
| ACCGTTATTCGTGTGATTGT+TGG | 0.468424 | 7_2:+85351758 | Msa1084980:CDS |
| TGAATCGATTGAGAGTGAAA+AGG | 0.471410 | 7_2:-85350483 | None:intergenic |
| GATTTATTGATGGTGAAGAT+TGG | 0.471951 | 7_2:+85353021 | Msa1084980:CDS |
| GTTATCTCAGCATGTTTGAC+TGG | 0.474164 | 7_2:+85352999 | Msa1084980:CDS |
| CTTGTCACCATCGTACGAAT+GGG | 0.479220 | 7_2:-85351428 | None:intergenic |
| AGGATCCGGTGTCTTGTGTC+TGG | 0.479776 | 7_2:+85352140 | Msa1084980:CDS |
| AATTGGTATCGTACGTCTCT+GGG | 0.481488 | 7_2:+85351402 | Msa1084980:CDS |
| TTGGTTCCTTTCCTTCGAGA+TGG | 0.481917 | 7_2:+85351321 | Msa1084980:exon |
| GAGAGAGGTTACATTTAATA+CGG | 0.484763 | 7_2:-85350553 | None:intergenic |
| TGATCATTGATCTGTTCAAT+GGG | 0.487875 | 7_2:+85353634 | Msa1084980:CDS |
| CCAAACAATGACTGAAATTG+AGG | 0.488156 | 7_2:-85353519 | None:intergenic |
| CCAATGGAATATAATGTTGA+GGG | 0.494081 | 7_2:+85351984 | Msa1084980:CDS |
| CAAAACAAACACAGCCTCAC+TGG | 0.496304 | 7_2:-85353285 | None:intergenic |
| TTGAACAGATCAATGATCAA+TGG | 0.496477 | 7_2:-85353630 | None:intergenic |
| AACAGGTGAACTAACTCCTC+TGG | 0.502600 | 7_2:-85351620 | None:intergenic |
| ACCAACAATCACACGAATAA+CGG | 0.504989 | 7_2:-85351759 | None:intergenic |
| GCTTGTCACCATCGTACGAA+TGG | 0.506089 | 7_2:-85351429 | None:intergenic |
| TCAGTCTCTCTATCTTGAAA+AGG | 0.515504 | 7_2:+85350700 | Msa1084980:five_prime_UTR |
| TGGTTGCACGGGTGACAAAC+CGG | 0.516255 | 7_2:+85352196 | Msa1084980:CDS |
| GGTTACATTTAATACGGTCT+GGG | 0.518026 | 7_2:-85350547 | None:intergenic |
| AATTTCAGTCATTGTTTGGG+AGG | 0.524248 | 7_2:+85353523 | Msa1084980:CDS |
| GTCTACTTCCAATCCAACCT+TGG | 0.526036 | 7_2:+85353572 | Msa1084980:CDS |
| AGTGATTGTGACTTCTTGGC+TGG | 0.526342 | 7_2:+85351842 | Msa1084980:CDS |
| AAGCTCAAGCAGCATCAGCT+TGG | 0.527989 | 7_2:-85352015 | None:intergenic |
| TTGACTCCATTATTGAAGAT+GGG | 0.530566 | 7_2:+85352970 | Msa1084980:CDS |
| CACGGGTGACAAACCGGTGG+TGG | 0.532517 | 7_2:+85352202 | Msa1084980:CDS |
| GGTCCAAAGATGAGAGAATA+CGG | 0.535881 | 7_2:+85352900 | Msa1084980:CDS |
| TGGACCAATAGAGGCGATAG+AGG | 0.536537 | 7_2:-85352883 | None:intergenic |
| GAGGCGATAGAGGCGTCCGC+AGG | 0.543835 | 7_2:-85352873 | None:intergenic |
| TGACATTCACAACCACCACT+TGG | 0.545120 | 7_2:-85353785 | None:intergenic |
| CTATAACAACAATCCAAGGT+TGG | 0.546056 | 7_2:-85353585 | None:intergenic |
| GCAAAACGAATAACCACCAC+CGG | 0.548865 | 7_2:-85352215 | None:intergenic |
| TTCGTGCCACGAGGTTGAGA+AGG | 0.553860 | 7_2:+85353058 | Msa1084980:CDS |
| TTATTGATGGTGAAGATTGG+TGG | 0.554001 | 7_2:+85353024 | Msa1084980:CDS |
| GTTGTGTTGTCTGGTTGCAC+GGG | 0.556256 | 7_2:+85352185 | Msa1084980:CDS |
| TCATTTACTTAAGAACATGA+AGG | 0.559503 | 7_2:+85353349 | Msa1084980:CDS |
| TTTCGGATGAGACTGTTCAC+TGG | 0.560414 | 7_2:+85351641 | Msa1084980:CDS |
| AACTCTATAACAACAATCCA+AGG | 0.567493 | 7_2:-85353589 | None:intergenic |
| GCCAATGGAATATAATGTTG+AGG | 0.570129 | 7_2:+85351983 | Msa1084980:CDS |
| AACAATGACTGAAATTGAGG+TGG | 0.575647 | 7_2:-85353516 | None:intergenic |
| CATTGATCTGTTCAATGGGA+AGG | 0.576781 | 7_2:+85353638 | Msa1084980:CDS |
| ACCTCGTGGCACGAAAGAGA+AGG | 0.578644 | 7_2:-85353050 | None:intergenic |
| GATTCAGGCGTCGGTTCCAG+AGG | 0.581590 | 7_2:+85351604 | Msa1084980:CDS |
| CCGATAGGGAAAACATTCAA+AGG | 0.582837 | 7_2:+85353488 | Msa1084980:intron |
| ATATGTCCATCTCGAAGGAA+AGG | 0.587641 | 7_2:-85351327 | None:intergenic |
| GAGAAAGCTTTGAGGACGAA+AGG | 0.587787 | 7_2:+85350640 | Msa1084980:five_prime_UTR |
| TAAGAGGAGAACCATCGCTC+AGG | 0.589043 | 7_2:-85351360 | None:intergenic |
| TTGTTGCATAACCTGAGCGA+TGG | 0.596362 | 7_2:+85351349 | Msa1084980:CDS |
| TCTTATCGTGTCACTAACCA+TGG | 0.599932 | 7_2:+85351710 | Msa1084980:CDS |
| CCTCAAAGCTTTCTCAACAA+TGG | 0.599958 | 7_2:-85350632 | None:intergenic |
| GATTGCGATGTCTGAGCCAA+TGG | 0.600349 | 7_2:+85351968 | Msa1084980:CDS |
| TCCTTCTCTTTCGTGCCACG+AGG | 0.603090 | 7_2:+85353049 | Msa1084980:CDS |
| TTGTTGTTATAGAGTTGTGA+AGG | 0.613540 | 7_2:+85353596 | Msa1084980:CDS |
| TGGGAAACCCATTCGTACGA+TGG | 0.614031 | 7_2:+85351421 | Msa1084980:CDS |
| CAGGTCATTCATACGACTCA+AGG | 0.619419 | 7_2:-85351783 | None:intergenic |
| ACAATGACTGAAATTGAGGT+GGG | 0.624167 | 7_2:-85353515 | None:intergenic |
| CTCCTCTTAGCATAGAAGTG+AGG | 0.624186 | 7_2:+85351374 | Msa1084980:CDS |
| CAACAATATGTCCATCTCGA+AGG | 0.625289 | 7_2:-85351332 | None:intergenic |
| GATCATCACATCTCTCGAGA+TGG | 0.626853 | 7_2:+85351453 | Msa1084980:CDS |
| GGGATGTAGGATTCAGGCGT+CGG | 0.630176 | 7_2:+85351595 | Msa1084980:intron |
| AAGTGTTTGTGGAATTCCTG+CGG | 0.635455 | 7_2:+85352857 | Msa1084980:CDS |
| CGGATGAGACTGTTCACTGG+CGG | 0.637362 | 7_2:+85351644 | Msa1084980:CDS |
| AAACGCGATTAAACAGAGAG+AGG | 0.640999 | 7_2:+85350448 | None:intergenic |
| CAAAGCTTTCTCAACAATGG+CGG | 0.646139 | 7_2:-85350629 | None:intergenic |
| GAGGACGAAAGGTACGAAGG+AGG | 0.671680 | 7_2:+85350651 | Msa1084980:five_prime_UTR |
| CAATGGAATATAATGTTGAG+GGG | 0.676558 | 7_2:+85351985 | Msa1084980:CDS |
| TGGTTGTGAATGTCATGCGA+GGG | 0.679998 | 7_2:+85353793 | Msa1084980:CDS |
| TTTGAGGACGAAAGGTACGA+AGG | 0.681630 | 7_2:+85350648 | Msa1084980:five_prime_UTR |
| ATGCATCCTTCTCAACCTCG+TGG | 0.681648 | 7_2:-85353064 | None:intergenic |
| ATTCGCCAGACACAAGACAC+CGG | 0.685353 | 7_2:-85352145 | None:intergenic |
| GTGGTTGTGAATGTCATGCG+AGG | 0.685871 | 7_2:+85353792 | Msa1084980:CDS |
| CAGATGAATCCACAAAACAC+AGG | 0.690035 | 7_2:-85351802 | None:intergenic |
| TGTCTTTGATGGTACCAGTG+AGG | 0.698309 | 7_2:+85353271 | Msa1084980:CDS |
| TTGCACGGGTGACAAACCGG+TGG | 0.708065 | 7_2:+85352199 | Msa1084980:CDS |
| GGTTGTGAATGTCATGCGAG+GGG | 0.726803 | 7_2:+85353794 | Msa1084980:CDS |
| AAAGATGAGAGAATACGGCG+AGG | 0.773481 | 7_2:+85352905 | Msa1084980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATACATAAAAAAAAAAA+TGG | - | chr7_2:85350774-85350793 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTATGTATTG+TGG | + | chr7_2:85350773-85350792 | Msa1084980:intron | 10.0% |
| !! | TTTATGATAATTAGAATAAT+TGG | + | chr7_2:85351055-85351074 | Msa1084980:intron | 10.0% |
| !! | AACAAAAAAATAATAAGAAA+AGG | - | chr7_2:85352074-85352093 | None:intergenic | 10.0% |
| !!! | TTGTACTTTTTTTTTTTTTT+TGG | + | chr7_2:85352448-85352467 | Msa1084980:intron | 10.0% |
| !!! | TTAACATTTTAATTTCGTTT+CGG | + | chr7_2:85350731-85350750 | Msa1084980:intron | 15.0% |
| !! | TTTACTTATACATTTCTATA+TGG | + | chr7_2:85351201-85351220 | Msa1084980:intron | 15.0% |
| !!! | TTTTAATAGTACTTTATTCT+TGG | + | chr7_2:85351302-85351321 | Msa1084980:intron | 15.0% |
| !!! | ATTTTATTTTTAGATGTCAT+TGG | + | chr7_2:85351939-85351958 | Msa1084980:intron | 15.0% |
| !!! | TTTTTTTATATAGTTATTGC+AGG | + | chr7_2:85352795-85352814 | Msa1084980:intron | 15.0% |
| !!! | TTTATTTTTATTGTACTAAC+AGG | + | chr7_2:85353231-85353250 | Msa1084980:intron | 15.0% |
| !!! | TTTTTTTTTATGTATTGTGG+TGG | + | chr7_2:85350776-85350795 | Msa1084980:intron | 20.0% |
| !!! | TTTTTTTTATGTATTGTGGT+GGG | + | chr7_2:85350777-85350796 | Msa1084980:intron | 20.0% |
| !! | TGTATTTAATATTTGACCTT+TGG | + | chr7_2:85350870-85350889 | Msa1084980:intron | 20.0% |
| !! | TACAGTTAAAAATTCAGATT+TGG | - | chr7_2:85351156-85351175 | None:intergenic | 20.0% |
| !! | TTTAACTGTATTTCAATCAA+AGG | + | chr7_2:85351166-85351185 | Msa1084980:intron | 20.0% |
| !! | TACTTATTTAAAGGACATTT+GGG | - | chr7_2:85351240-85351259 | None:intergenic | 20.0% |
| !! | TGGAATATGTACTTATTTAA+AGG | - | chr7_2:85351249-85351268 | None:intergenic | 20.0% |
| !!! | ATATTTTTTTCCTTTTCTGT+CGG | + | chr7_2:85352324-85352343 | Msa1084980:intron | 20.0% |
| !!! | ATGAATTCCATTTAATTTCA+AGG | + | chr7_2:85353120-85353139 | Msa1084980:CDS | 20.0% |
| !! | CAAAGTATATGAAATAAGTA+TGG | - | chr7_2:85353689-85353708 | None:intergenic | 20.0% |
| !! | AGTGAATTGAAAATGGATTT+AGG | - | chr7_2:85350519-85350538 | None:intergenic | 25.0% |
| !!! | TTTTTTTATGTATTGTGGTG+GGG | + | chr7_2:85350778-85350797 | Msa1084980:intron | 25.0% |
| !! | AGATTCTTTTCAAATTTTGC+AGG | + | chr7_2:85350960-85350979 | Msa1084980:intron | 25.0% |
| !! | TTTTCAAATTTTGCAGGTAT+GGG | + | chr7_2:85350966-85350985 | Msa1084980:intron | 25.0% |
| ! | GTACTTATTTAAAGGACATT+TGG | - | chr7_2:85351241-85351260 | None:intergenic | 25.0% |
| !!! | AGTGTTGGATTAATTTGTAT+AGG | + | chr7_2:85351574-85351593 | Msa1084980:intron | 25.0% |
| !!! | GTGTTGGATTAATTTGTATA+GGG | + | chr7_2:85351575-85351594 | Msa1084980:intron | 25.0% |
| !!! | ATTAATTTGTATAGGGATGT+AGG | + | chr7_2:85351582-85351601 | Msa1084980:intron | 25.0% |
| !! | GGAGAAATTTGAAATAAATC+TGG | - | chr7_2:85352102-85352121 | None:intergenic | 25.0% |
| ! | TTTATTTCAAATTTCTCCCA+TGG | + | chr7_2:85352104-85352123 | Msa1084980:intron | 25.0% |
| ! | GCTAAAATCAAAATGTTTCT+TGG | + | chr7_2:85352236-85352255 | Msa1084980:CDS | 25.0% |
| ! | AATGAAACCTATATGGTAAA+CGG | - | chr7_2:85352294-85352313 | None:intergenic | 25.0% |
| !!! | TATTTTTTTCCTTTTCTGTC+GGG | + | chr7_2:85352325-85352344 | Msa1084980:intron | 25.0% |
| ! | AGTATACATACAATACAACT+TGG | - | chr7_2:85352363-85352382 | None:intergenic | 25.0% |
| ! | AAGTTGTATTGTATGTATAC+TGG | + | chr7_2:85352362-85352381 | Msa1084980:intron | 25.0% |
| !! | CTTAACTTCTAAAAACATCA+AGG | - | chr7_2:85352399-85352418 | None:intergenic | 25.0% |
| !!! | TTTTAGAAGTTAAGAGTGAT+TGG | + | chr7_2:85352405-85352424 | Msa1084980:intron | 25.0% |
| ! | TTTAGAAGTTAAGAGTGATT+GGG | + | chr7_2:85352406-85352425 | Msa1084980:intron | 25.0% |
| !!! | ATTTTATTTGTATTCGTTGC+AGG | + | chr7_2:85352832-85352851 | Msa1084980:intron | 25.0% |
| !! | AATTCCATTTAATTTCAAGG+TGG | + | chr7_2:85353123-85353142 | Msa1084980:intron | 25.0% |
| ! | TCATTTACTTAAGAACATGA+AGG | + | chr7_2:85353349-85353368 | Msa1084980:CDS | 25.0% |
| !!! | TTTTATGTTTGTTGAGACTT+AGG | + | chr7_2:85353712-85353731 | Msa1084980:intron | 25.0% |
| GAGAGAGGTTACATTTAATA+CGG | - | chr7_2:85350556-85350575 | None:intergenic | 30.0% | |
| ! | ACTGAACCAAAATGAGATTT+TGG | - | chr7_2:85350580-85350599 | None:intergenic | 30.0% |
| AAAATGGTAAACATTGCACA+TGG | - | chr7_2:85350758-85350777 | None:intergenic | 30.0% | |
| !!! | TTTTTTATGTATTGTGGTGG+GGG | + | chr7_2:85350779-85350798 | Msa1084980:intron | 30.0% |
| TTCTTGCATTGTTAAACATG+TGG | + | chr7_2:85350821-85350840 | Msa1084980:intron | 30.0% | |
| TCTTGCATTGTTAAACATGT+GGG | + | chr7_2:85350822-85350841 | Msa1084980:intron | 30.0% | |
| ! | CTTTTCAAATTTTGCAGGTA+TGG | + | chr7_2:85350965-85350984 | Msa1084980:intron | 30.0% |
| AAAGATTGTCAATTACTGTC+TGG | - | chr7_2:85351269-85351288 | None:intergenic | 30.0% | |
| ATAGAAGTGAGGTTGAAAAT+TGG | + | chr7_2:85351385-85351404 | Msa1084980:CDS | 30.0% | |
| TAAAAATCAGACGATAACCA+TGG | - | chr7_2:85351730-85351749 | None:intergenic | 30.0% | |
| CCAATGGAATATAATGTTGA+GGG | + | chr7_2:85351984-85352003 | Msa1084980:CDS | 30.0% | |
| CAATGGAATATAATGTTGAG+GGG | + | chr7_2:85351985-85352004 | Msa1084980:CDS | 30.0% | |
| !!! | TTGTCGTTTTCTTTTGCTAT+TGG | + | chr7_2:85352264-85352283 | Msa1084980:intron | 30.0% |
| ACCTTATAAGGTGAATAAGT+GGG | + | chr7_2:85352500-85352519 | Msa1084980:intron | 30.0% | |
| !! | ACAAGGCTTTATTATATGCA+GGG | - | chr7_2:85352549-85352568 | None:intergenic | 30.0% |
| !!! | AGGTTACTGATTTTAGGAAA+AGG | + | chr7_2:85352749-85352768 | Msa1084980:intron | 30.0% |
| ! | TTATTGCAGGTTAGTGTTTT+AGG | + | chr7_2:85352808-85352827 | Msa1084980:intron | 30.0% |
| ! | TATTGCAGGTTAGTGTTTTA+GGG | + | chr7_2:85352809-85352828 | Msa1084980:intron | 30.0% |
| TTGACTCCATTATTGAAGAT+GGG | + | chr7_2:85352970-85352989 | Msa1084980:CDS | 30.0% | |
| AAACTTCCCATCTTCAATAA+TGG | - | chr7_2:85352979-85352998 | None:intergenic | 30.0% | |
| TGTTTGACTGGATTTATTGA+TGG | + | chr7_2:85353011-85353030 | Msa1084980:CDS | 30.0% | |
| !! | GATTTATTGATGGTGAAGAT+TGG | + | chr7_2:85353021-85353040 | Msa1084980:CDS | 30.0% |
| TGCAAAGCATGAAATAAACT+CGG | - | chr7_2:85353187-85353206 | None:intergenic | 30.0% | |
| TGAACAATAGAAAGTGAAAC+AGG | - | chr7_2:85353396-85353415 | None:intergenic | 30.0% | |
| ATTATCCTACTTAAACCGAT+AGG | + | chr7_2:85353473-85353492 | Msa1084980:intron | 30.0% | |
| TTATCCTACTTAAACCGATA+GGG | + | chr7_2:85353474-85353493 | Msa1084980:intron | 30.0% | |
| CTCAATTTCAGTCATTGTTT+GGG | + | chr7_2:85353520-85353539 | Msa1084980:CDS | 30.0% | |
| !!! | TTTGCTTTTTTTGGTGGAAA+AGG | + | chr7_2:85353548-85353567 | Msa1084980:CDS | 30.0% |
| AACTCTATAACAACAATCCA+AGG | - | chr7_2:85353592-85353611 | None:intergenic | 30.0% | |
| ! | TTGTTGTTATAGAGTTGTGA+AGG | + | chr7_2:85353596-85353615 | Msa1084980:CDS | 30.0% |
| TTGAACAGATCAATGATCAA+TGG | - | chr7_2:85353633-85353652 | None:intergenic | 30.0% | |
| TTGATCATTGATCTGTTCAA+TGG | + | chr7_2:85353633-85353652 | Msa1084980:CDS | 30.0% | |
| TGATCATTGATCTGTTCAAT+GGG | + | chr7_2:85353634-85353653 | Msa1084980:CDS | 30.0% | |
| TGAGAGTGAAAAGGGATTTA+GGG | - | chr7_2:85350477-85350496 | None:intergenic | 35.0% | |
| TTGAGAGTGAAAAGGGATTT+AGG | - | chr7_2:85350478-85350497 | None:intergenic | 35.0% | |
| GAATCGATTGAGAGTGAAAA+GGG | - | chr7_2:85350485-85350504 | None:intergenic | 35.0% | |
| TGAATCGATTGAGAGTGAAA+AGG | - | chr7_2:85350486-85350505 | None:intergenic | 35.0% | |
| GAGTGAGAGTGAATTGAAAA+TGG | - | chr7_2:85350526-85350545 | None:intergenic | 35.0% | |
| GGTTACATTTAATACGGTCT+GGG | - | chr7_2:85350550-85350569 | None:intergenic | 35.0% | |
| AGGTTACATTTAATACGGTC+TGG | - | chr7_2:85350551-85350570 | None:intergenic | 35.0% | |
| TCAGTCTCTCTATCTTGAAA+AGG | + | chr7_2:85350700-85350719 | Msa1084980:five_prime_UTR | 35.0% | |
| !!! | TTTCCAGTTTTCGAGTTGTA+CGG | + | chr7_2:85351678-85351697 | Msa1084980:CDS | 35.0% |
| !!! | TTTTCGAGTTGTACGGAATT+TGG | + | chr7_2:85351685-85351704 | Msa1084980:CDS | 35.0% |
| !! | TTTCGAGTTGTACGGAATTT+GGG | + | chr7_2:85351686-85351705 | Msa1084980:CDS | 35.0% |
| ACCAACAATCACACGAATAA+CGG | - | chr7_2:85351762-85351781 | None:intergenic | 35.0% | |
| ! | TATGAATGACCTGTGTTTTG+TGG | + | chr7_2:85351793-85351812 | Msa1084980:CDS | 35.0% |
| TTGTTCAAGACACAAACATG+TGG | + | chr7_2:85351889-85351908 | Msa1084980:intron | 35.0% | |
| TGTTCAAGACACAAACATGT+GGG | + | chr7_2:85351890-85351909 | Msa1084980:intron | 35.0% | |
| GCCAATGGAATATAATGTTG+AGG | + | chr7_2:85351983-85352002 | Msa1084980:CDS | 35.0% | |
| CCCTCAACATTATATTCCAT+TGG | - | chr7_2:85351987-85352006 | None:intergenic | 35.0% | |
| !! | TTCTCCCATGGATTTTAAAG+TGG | + | chr7_2:85352116-85352135 | Msa1084980:intron | 35.0% |
| !! | CCTACCACTTTAAAATCCAT+GGG | - | chr7_2:85352123-85352142 | None:intergenic | 35.0% |
| !! | TCCTACCACTTTAAAATCCA+TGG | - | chr7_2:85352124-85352143 | None:intergenic | 35.0% |
| !!! | GATTTTAAAGTGGTAGGATC+CGG | + | chr7_2:85352126-85352145 | Msa1084980:intron | 35.0% |
| AGACAACACAACCTTCAATT+TGG | - | chr7_2:85352177-85352196 | None:intergenic | 35.0% | |
| AAATTGAAGGTTGTGTTGTC+TGG | + | chr7_2:85352176-85352195 | Msa1084980:CDS | 35.0% | |
| CATATAGGTTTCATTTCGCA+GGG | + | chr7_2:85352299-85352318 | Msa1084980:intron | 35.0% | |
| AAAACAAAACCCGACAGAAA+AGG | - | chr7_2:85352337-85352356 | None:intergenic | 35.0% | |
| TGGCTAGAATTCACCTTATA+AGG | + | chr7_2:85352488-85352507 | Msa1084980:intron | 35.0% | |
| CACCTTATAAGGTGAATAAG+TGG | + | chr7_2:85352499-85352518 | Msa1084980:intron | 35.0% | |
| CCTTATAAGGTGAATAAGTG+GGG | + | chr7_2:85352501-85352520 | Msa1084980:intron | 35.0% | |
| !! | CAAGGCTTTATTATATGCAG+GGG | - | chr7_2:85352548-85352567 | None:intergenic | 35.0% |
| !! | GACAAGGCTTTATTATATGC+AGG | - | chr7_2:85352550-85352569 | None:intergenic | 35.0% |
| TCAGTAACCTGCATGATATT+CGG | - | chr7_2:85352739-85352758 | None:intergenic | 35.0% | |
| !!! | TCATGCAGGTTACTGATTTT+AGG | + | chr7_2:85352743-85352762 | Msa1084980:intron | 35.0% |
| !! | TGAATTCTCTTTTGTTTGCG+TGG | + | chr7_2:85352772-85352791 | Msa1084980:intron | 35.0% |
| AGTTCAACTATCGTCTTCTT+CGG | - | chr7_2:85352951-85352970 | None:intergenic | 35.0% | |
| CTTGACTCCATTATTGAAGA+TGG | + | chr7_2:85352969-85352988 | Msa1084980:CDS | 35.0% | |
| !! | TTATTGATGGTGAAGATTGG+TGG | + | chr7_2:85353024-85353043 | Msa1084980:CDS | 35.0% |
| AAGGATGCATCAACTTTGAT+AGG | + | chr7_2:85353077-85353096 | Msa1084980:CDS | 35.0% | |
| TCAACTTTGATAGGCGATAA+TGG | + | chr7_2:85353086-85353105 | Msa1084980:CDS | 35.0% | |
| ! | CCATTTAATTTCAAGGTGGA+CGG | + | chr7_2:85353127-85353146 | Msa1084980:intron | 35.0% |
| ! | CATTTAATTTCAAGGTGGAC+GGG | + | chr7_2:85353128-85353147 | Msa1084980:intron | 35.0% |
| AACTCGGAAACAATAAATCG+AGG | - | chr7_2:85353171-85353190 | None:intergenic | 35.0% | |
| GCAAAGTTTACTGTCTTTGA+TGG | + | chr7_2:85353260-85353279 | Msa1084980:CDS | 35.0% | |
| TTCTCAACAAATTACGCAAC+AGG | - | chr7_2:85353434-85353453 | None:intergenic | 35.0% | |
| !!! | TTTTCCCTATCGGTTTAAGT+AGG | - | chr7_2:85353481-85353500 | None:intergenic | 35.0% |
| ! | CCTTTGAATGTTTTCCCTAT+CGG | - | chr7_2:85353491-85353510 | None:intergenic | 35.0% |
| ACAATGACTGAAATTGAGGT+GGG | - | chr7_2:85353518-85353537 | None:intergenic | 35.0% | |
| AACAATGACTGAAATTGAGG+TGG | - | chr7_2:85353519-85353538 | None:intergenic | 35.0% | |
| CCAAACAATGACTGAAATTG+AGG | - | chr7_2:85353522-85353541 | None:intergenic | 35.0% | |
| CCTCAATTTCAGTCATTGTT+TGG | + | chr7_2:85353519-85353538 | Msa1084980:CDS | 35.0% | |
| AATTTCAGTCATTGTTTGGG+AGG | + | chr7_2:85353523-85353542 | Msa1084980:CDS | 35.0% | |
| !!! | TGGGAGGAATTTGCTTTTTT+TGG | + | chr7_2:85353539-85353558 | Msa1084980:CDS | 35.0% |
| !!! | GAGGAATTTGCTTTTTTTGG+TGG | + | chr7_2:85353542-85353561 | Msa1084980:CDS | 35.0% |
| CTATAACAACAATCCAAGGT+TGG | - | chr7_2:85353588-85353607 | None:intergenic | 35.0% | |
| !!! | GACTTTGAGTTTTTTCCAAG+TGG | + | chr7_2:85353770-85353789 | Msa1084980:CDS | 35.0% |
| !!! | TTTGAGTTTTTTCCAAGTGG+TGG | + | chr7_2:85353773-85353792 | Msa1084980:CDS | 35.0% |
| !! | AAATGAGATTTTGGCGAGAG+AGG | - | chr7_2:85350571-85350590 | None:intergenic | 40.0% |
| ! | CTCTCGCCAAAATCTCATTT+TGG | + | chr7_2:85350571-85350590 | Msa1084980:five_prime_UTR | 40.0% |
| CAAAGCTTTCTCAACAATGG+CGG | - | chr7_2:85350632-85350651 | None:intergenic | 40.0% | |
| CCTCAAAGCTTTCTCAACAA+TGG | - | chr7_2:85350635-85350654 | None:intergenic | 40.0% | |
| CCATTGTTGAGAAAGCTTTG+AGG | + | chr7_2:85350632-85350651 | Msa1084980:five_prime_UTR | 40.0% | |
| ATATGTCCATCTCGAAGGAA+AGG | - | chr7_2:85351330-85351349 | None:intergenic | 40.0% | |
| CAACAATATGTCCATCTCGA+AGG | - | chr7_2:85351335-85351354 | None:intergenic | 40.0% | |
| AACCTCACTTCTATGCTAAG+AGG | - | chr7_2:85351379-85351398 | None:intergenic | 40.0% | |
| AAATTGGTATCGTACGTCTC+TGG | + | chr7_2:85351401-85351420 | Msa1084980:CDS | 40.0% | |
| AATTGGTATCGTACGTCTCT+GGG | + | chr7_2:85351402-85351421 | Msa1084980:CDS | 40.0% | |
| AATGTGACTATGCTGAGTGT+TGG | + | chr7_2:85351559-85351578 | Msa1084980:intron | 40.0% | |
| TGTATAGGGATGTAGGATTC+AGG | + | chr7_2:85351589-85351608 | Msa1084980:intron | 40.0% | |
| AGGAGTTAGTTCACCTGTTT+CGG | + | chr7_2:85351624-85351643 | Msa1084980:CDS | 40.0% | |
| ATTCCGTACAACTCGAAAAC+TGG | - | chr7_2:85351684-85351703 | None:intergenic | 40.0% | |
| ! | TCTTATCGTGTCACTAACCA+TGG | + | chr7_2:85351710-85351729 | Msa1084980:CDS | 40.0% |
| ACCGTTATTCGTGTGATTGT+TGG | + | chr7_2:85351758-85351777 | Msa1084980:CDS | 40.0% | |
| CAGATGAATCCACAAAACAC+AGG | - | chr7_2:85351805-85351824 | None:intergenic | 40.0% | |
| TCAGAGTGATTGTGACTTCT+TGG | + | chr7_2:85351838-85351857 | Msa1084980:CDS | 40.0% | |
| !!! | CCCATGGATTTTAAAGTGGT+AGG | + | chr7_2:85352120-85352139 | Msa1084980:intron | 40.0% |
| CGAATGCACTTCCAAATTGA+AGG | + | chr7_2:85352163-85352182 | Msa1084980:CDS | 40.0% | |
| CCTGCGAAATGAAACCTATA+TGG | - | chr7_2:85352301-85352320 | None:intergenic | 40.0% | |
| CCATATAGGTTTCATTTCGC+AGG | + | chr7_2:85352298-85352317 | Msa1084980:intron | 40.0% | |
| TAAGGTGAATTCTAGCCACT+AGG | - | chr7_2:85352486-85352505 | None:intergenic | 40.0% | |
| CCCCACTTATTCACCTTATA+AGG | - | chr7_2:85352504-85352523 | None:intergenic | 40.0% | |
| TCCTTATGTAGAGAACGTCA+AGG | + | chr7_2:85352690-85352709 | Msa1084980:intron | 40.0% | |
| TCCTTGACGTTCTCTACATA+AGG | - | chr7_2:85352694-85352713 | None:intergenic | 40.0% | |
| TGTAGATCCGAATATCATGC+AGG | + | chr7_2:85352729-85352748 | Msa1084980:intron | 40.0% | |
| AAGTGTTTGTGGAATTCCTG+CGG | + | chr7_2:85352857-85352876 | Msa1084980:CDS | 40.0% | |
| TCTCATCTTTGGACCAATAG+AGG | - | chr7_2:85352895-85352914 | None:intergenic | 40.0% | |
| GGTCCAAAGATGAGAGAATA+CGG | + | chr7_2:85352900-85352919 | Msa1084980:CDS | 40.0% | |
| GTTCAACTATCGTCTTCTTC+GGG | - | chr7_2:85352950-85352969 | None:intergenic | 40.0% | |
| GTTATCTCAGCATGTTTGAC+TGG | + | chr7_2:85352999-85353018 | Msa1084980:CDS | 40.0% | |
| CCGTCCACCTTGAAATTAAA+TGG | - | chr7_2:85353130-85353149 | None:intergenic | 40.0% | |
| TTGTTCGACGATGATCTTAG+TGG | + | chr7_2:85353305-85353324 | Msa1084980:CDS | 40.0% | |
| CCGATAGGGAAAACATTCAA+AGG | + | chr7_2:85353488-85353507 | Msa1084980:intron | 40.0% | |
| ACAACAATCCAAGGTTGGAT+TGG | - | chr7_2:85353583-85353602 | None:intergenic | 40.0% | |
| CATTGATCTGTTCAATGGGA+AGG | + | chr7_2:85353638-85353657 | Msa1084980:CDS | 40.0% | |
| ! | GTTTGTTGAGACTTAGGCAA+AGG | + | chr7_2:85353718-85353737 | Msa1084980:intron | 40.0% |
| !! | GAGAAAGCTTTGAGGACGAA+AGG | + | chr7_2:85350640-85350659 | Msa1084980:five_prime_UTR | 45.0% |
| ! | TTTGAGGACGAAAGGTACGA+AGG | + | chr7_2:85350648-85350667 | Msa1084980:five_prime_UTR | 45.0% |
| GTTAGACTCACACACTCCAA+AGG | - | chr7_2:85350889-85350908 | None:intergenic | 45.0% | |
| TTGGTTCCTTTCCTTCGAGA+TGG | + | chr7_2:85351321-85351340 | Msa1084980:exon | 45.0% | |
| TTGTTGCATAACCTGAGCGA+TGG | + | chr7_2:85351349-85351368 | Msa1084980:CDS | 45.0% | |
| CTCCTCTTAGCATAGAAGTG+AGG | + | chr7_2:85351374-85351393 | Msa1084980:CDS | 45.0% | |
| CTTGTCACCATCGTACGAAT+GGG | - | chr7_2:85351431-85351450 | None:intergenic | 45.0% | |
| GATCATCACATCTCTCGAGA+TGG | + | chr7_2:85351453-85351472 | Msa1084980:CDS | 45.0% | |
| AACAGGTGAACTAACTCCTC+TGG | - | chr7_2:85351623-85351642 | None:intergenic | 45.0% | |
| TGAACAGTCTCATCCGAAAC+AGG | - | chr7_2:85351640-85351659 | None:intergenic | 45.0% | |
| TTTCGGATGAGACTGTTCAC+TGG | + | chr7_2:85351641-85351660 | Msa1084980:CDS | 45.0% | |
| CAGGTCATTCATACGACTCA+AGG | - | chr7_2:85351786-85351805 | None:intergenic | 45.0% | |
| AGTGATTGTGACTTCTTGGC+TGG | + | chr7_2:85351842-85351861 | Msa1084980:CDS | 45.0% | |
| ! | TGCTTGAGCTTTTGGATACC+AGG | + | chr7_2:85352027-85352046 | Msa1084980:CDS | 45.0% |
| GCAAAACGAATAACCACCAC+CGG | - | chr7_2:85352218-85352237 | None:intergenic | 45.0% | |
| ! | TGGACTGCCGTTTACCATAT+AGG | + | chr7_2:85352284-85352303 | Msa1084980:intron | 45.0% |
| TGGTCAAGTAAGTAGCCTAG+TGG | + | chr7_2:85352468-85352487 | Msa1084980:intron | 45.0% | |
| TTTATTATATGCAGGGGCCG+GGG | - | chr7_2:85352542-85352561 | None:intergenic | 45.0% | |
| CTTTATTATATGCAGGGGCC+GGG | - | chr7_2:85352543-85352562 | None:intergenic | 45.0% | |
| ! | GCTTTATTATATGCAGGGGC+CGG | - | chr7_2:85352544-85352563 | None:intergenic | 45.0% |
| !! | ATAGCTCAGTTGGTAGGACA+AGG | - | chr7_2:85352566-85352585 | None:intergenic | 45.0% |
| TACCAACTGAGCTATGCTCA+CGG | + | chr7_2:85352571-85352590 | Msa1084980:intron | 45.0% | |
| CGTTGCAGGTTAAGTGTTTG+TGG | + | chr7_2:85352846-85352865 | Msa1084980:intron | 45.0% | |
| TCGCCGTATTCTCTCATCTT+TGG | - | chr7_2:85352906-85352925 | None:intergenic | 45.0% | |
| AAAGATGAGAGAATACGGCG+AGG | + | chr7_2:85352905-85352924 | Msa1084980:CDS | 45.0% | |
| ! | TGTCTTTGATGGTACCAGTG+AGG | + | chr7_2:85353271-85353290 | Msa1084980:CDS | 45.0% |
| CAAAACAAACACAGCCTCAC+TGG | - | chr7_2:85353288-85353307 | None:intergenic | 45.0% | |
| GTCTACTTCCAATCCAACCT+TGG | + | chr7_2:85353572-85353591 | Msa1084980:CDS | 45.0% | |
| TGACATTCACAACCACCACT+TGG | - | chr7_2:85353788-85353807 | None:intergenic | 45.0% | |
| TGGTTGTGAATGTCATGCGA+GGG | + | chr7_2:85353793-85353812 | Msa1084980:CDS | 45.0% | |
| !!! | AAAATTATTTAATTTAAAAC+AGG | + | chr7_2:85352664-85352683 | Msa1084980:intron | 5.0% |
| TAAGAGGAGAACCATCGCTC+AGG | - | chr7_2:85351363-85351382 | None:intergenic | 50.0% | |
| TGGGAAACCCATTCGTACGA+TGG | + | chr7_2:85351421-85351440 | Msa1084980:CDS | 50.0% | |
| GCTTGTCACCATCGTACGAA+TGG | - | chr7_2:85351432-85351451 | None:intergenic | 50.0% | |
| GATTGCGATGTCTGAGCCAA+TGG | + | chr7_2:85351968-85351987 | Msa1084980:CDS | 50.0% | |
| AAGCTCAAGCAGCATCAGCT+TGG | - | chr7_2:85352018-85352037 | None:intergenic | 50.0% | |
| !! | GCTGATGCTGCTTGAGCTTT+TGG | + | chr7_2:85352019-85352038 | Msa1084980:CDS | 50.0% |
| ! | GAAAAGGCGTAAGCAACGCT+AGG | - | chr7_2:85352058-85352077 | None:intergenic | 50.0% |
| ATTCGCCAGACACAAGACAC+CGG | - | chr7_2:85352148-85352167 | None:intergenic | 50.0% | |
| GGTTGTGTTGTCTGGTTGCA+CGG | + | chr7_2:85352184-85352203 | Msa1084980:CDS | 50.0% | |
| GTTGTGTTGTCTGGTTGCAC+GGG | + | chr7_2:85352185-85352204 | Msa1084980:CDS | 50.0% | |
| AGGTGAATAAGTGGGGTGTG+CGG | + | chr7_2:85352508-85352527 | Msa1084980:intron | 50.0% | |
| GTGAGCATAGCTCAGTTGGT+AGG | - | chr7_2:85352572-85352591 | None:intergenic | 50.0% | |
| ACCAACTGAGCTATGCTCAC+GGG | + | chr7_2:85352572-85352591 | Msa1084980:intron | 50.0% | |
| TGGACCAATAGAGGCGATAG+AGG | - | chr7_2:85352886-85352905 | None:intergenic | 50.0% | |
| ATGCATCCTTCTCAACCTCG+TGG | - | chr7_2:85353067-85353086 | None:intergenic | 50.0% | |
| GTGGTTGTGAATGTCATGCG+AGG | + | chr7_2:85353792-85353811 | Msa1084980:CDS | 50.0% | |
| GGTTGTGAATGTCATGCGAG+GGG | + | chr7_2:85353794-85353813 | Msa1084980:CDS | 50.0% | |
| ! | GAGGACGAAAGGTACGAAGG+AGG | + | chr7_2:85350651-85350670 | Msa1084980:five_prime_UTR | 55.0% |
| GGGATGTAGGATTCAGGCGT+CGG | + | chr7_2:85351595-85351614 | Msa1084980:intron | 55.0% | |
| CGGATGAGACTGTTCACTGG+CGG | + | chr7_2:85351644-85351663 | Msa1084980:CDS | 55.0% | |
| AAGCAACGCTAGGAGGAACC+TGG | - | chr7_2:85352048-85352067 | None:intergenic | 55.0% | |
| AAGGCGTAAGCAACGCTAGG+AGG | - | chr7_2:85352055-85352074 | None:intergenic | 55.0% | |
| AGGATCCGGTGTCTTGTGTC+TGG | + | chr7_2:85352140-85352159 | Msa1084980:CDS | 55.0% | |
| TGGTTGCACGGGTGACAAAC+CGG | + | chr7_2:85352196-85352215 | Msa1084980:CDS | 55.0% | |
| GGTGAATAAGTGGGGTGTGC+GGG | + | chr7_2:85352509-85352528 | Msa1084980:intron | 55.0% | |
| TCCCGTGAGCATAGCTCAGT+TGG | - | chr7_2:85352576-85352595 | None:intergenic | 55.0% | |
| GACGCCTCTATCGCCTCTAT+TGG | + | chr7_2:85352879-85352898 | Msa1084980:CDS | 55.0% | |
| TCCTTCTCTTTCGTGCCACG+AGG | + | chr7_2:85353049-85353068 | Msa1084980:CDS | 55.0% | |
| ACCTCGTGGCACGAAAGAGA+AGG | - | chr7_2:85353053-85353072 | None:intergenic | 55.0% | |
| TTCGTGCCACGAGGTTGAGA+AGG | + | chr7_2:85353058-85353077 | Msa1084980:CDS | 55.0% | |
| !! | GATTCAGGCGTCGGTTCCAG+AGG | + | chr7_2:85351604-85351623 | Msa1084980:CDS | 60.0% |
| TTGCACGGGTGACAAACCGG+TGG | + | chr7_2:85352199-85352218 | Msa1084980:CDS | 60.0% | |
| CACGGGTGACAAACCGGTGG+TGG | + | chr7_2:85352202-85352221 | Msa1084980:CDS | 65.0% | |
| GGTGTGCGGGATTCGAACCC+CGG | + | chr7_2:85352522-85352541 | Msa1084980:intron | 65.0% | |
| !! | GAGGCGATAGAGGCGTCCGC+AGG | - | chr7_2:85352876-85352895 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 85350455 | 85353823 | 85350455 | ID=Msa1084980;Name=Msa1084980 |
| chr7_2 | mRNA | 85350455 | 85353823 | 85350455 | ID=Msa1084980-mRNA-1;Parent=Msa1084980;Name=Msa1084980-mRNA-1;_AED=0.24;_eAED=0.27;_QI=296|0.75|0.77|1|0.75|0.66|9|0|434 |
| chr7_2 | exon | 85350455 | 85350721 | 85350455 | ID=Msa1084980-mRNA-1:exon:23045;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85351311 | 85351492 | 85351311 | ID=Msa1084980-mRNA-1:exon:23046;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85351596 | 85351863 | 85351596 | ID=Msa1084980-mRNA-1:exon:23047;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85351952 | 85352048 | 85351952 | ID=Msa1084980-mRNA-1:exon:23048;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85352136 | 85352261 | 85352136 | ID=Msa1084980-mRNA-1:exon:23049;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85352854 | 85353141 | 85352854 | ID=Msa1084980-mRNA-1:exon:23050;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85353253 | 85353370 | 85353253 | ID=Msa1084980-mRNA-1:exon:23051;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85353495 | 85353659 | 85353495 | ID=Msa1084980-mRNA-1:exon:23052;Parent=Msa1084980-mRNA-1 |
| chr7_2 | exon | 85353734 | 85353823 | 85353734 | ID=Msa1084980-mRNA-1:exon:23053;Parent=Msa1084980-mRNA-1 |
| chr7_2 | five_prime_UTR | 85350455 | 85350721 | 85350455 | ID=Msa1084980-mRNA-1:five_prime_utr;Parent=Msa1084980-mRNA-1 |
| chr7_2 | five_prime_UTR | 85351311 | 85351339 | 85351311 | ID=Msa1084980-mRNA-1:five_prime_utr;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85351340 | 85351492 | 85351340 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85351596 | 85351863 | 85351596 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85351952 | 85352048 | 85351952 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85352136 | 85352261 | 85352136 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85352854 | 85353141 | 85352854 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85353253 | 85353370 | 85353253 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85353495 | 85353659 | 85353495 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| chr7_2 | CDS | 85353734 | 85353823 | 85353734 | ID=Msa1084980-mRNA-1:cds;Parent=Msa1084980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
